Cp4.1LG11g10180 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g10180
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDomain of unknown function (DUF313)
LocationCp4.1LG11 : 8543735 .. 8544454 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGATAATCTAGACTCCATCAGTTCTAGCTCGTTTCAATGGATGGACAATTTCAACCAAATAGTTTGTAGAAAGAAAAGGACTCTAGTTGAATATATCGACTGTCCTGGCCATGAGAACCCGAACATGTCGCCGACGCCGATGAACAGAGTTGATCCAGAAGCCGAAAATCGGTCTGGGGTCGTGAATGGCAATAGCCCAATTGCCGAAAACCCACCGGAGCCGATGAATGAAGATGACCCAGATGAGGAAATTCAGCCGGTGGCGGAGGAGGAGATGCCGGCAGAGATGAGAGATCATATAACGGAAAGAATGGGTGGTTACCGTGTGCAAATGATAATCGAAAAGAAGTTGACGGCGACTGACATGAGGACGAATCAAGGGCGGCTGTCGCTGCCGAAGAAGATGGTGAGAGTGGAATTTATGACGGCGGAGGAGGAGAAGATGTTGGAGCACCGGAGCAAAGGGGAAGATGAATTGAACTACATTGACACATTCATAGTGGGATCCGATTTAAAAGTGAATCCAATTCGGTTCAAGAAGTGGCTAATGGGGAAAAATTACGTGAATTGTTTGGTCAACAAATGGAACTCTTTTGCTAGAGCTTATGGACTCAAGACCGGAACTAAGGTTCGTGTTTGGAGTTTCAGGGTCGATGAAAGGGACGAGAACGACGTTGTTAAATCTGAATTGCGCTTCGCCCTTGTCAAGATTTAA

mRNA sequence

ATGTCTGATAATCTAGACTCCATCAGTTCTAGCTCGTTTCAATGGATGGACAATTTCAACCAAATAGTTTGTAGAAAGAAAAGGACTCTAGTTGAATATATCGACTGTCCTGGCCATGAGAACCCGAACATGTCGCCGACGCCGATGAACAGAGTTGATCCAGAAGCCGAAAATCGGTCTGGGGTCGTGAATGGCAATAGCCCAATTGCCGAAAACCCACCGGAGCCGATGAATGAAGATGACCCAGATGAGGAAATTCAGCCGGTGGCGGAGGAGGAGATGCCGGCAGAGATGAGAGATCATATAACGGAAAGAATGGGTGGTTACCGTGTGCAAATGATAATCGAAAAGAAGTTGACGGCGACTGACATGAGGACGAATCAAGGGCGGCTGTCGCTGCCGAAGAAGATGGTGAGAGTGGAATTTATGACGGCGGAGGAGGAGAAGATGTTGGAGCACCGGAGCAAAGGGGAAGATGAATTGAACTACATTGACACATTCATAGTGGGATCCGATTTAAAAGTGAATCCAATTCGGTTCAAGAAGTGGCTAATGGGGAAAAATTACGTGAATTGTTTGGTCAACAAATGGAACTCTTTTGCTAGAGCTTATGGACTCAAGACCGGAACTAAGGTTCGTGTTTGGAGTTTCAGGGTCGATGAAAGGGACGAGAACGACGTTGTTAAATCTGAATTGCGCTTCGCCCTTGTCAAGATTTAA

Coding sequence (CDS)

ATGTCTGATAATCTAGACTCCATCAGTTCTAGCTCGTTTCAATGGATGGACAATTTCAACCAAATAGTTTGTAGAAAGAAAAGGACTCTAGTTGAATATATCGACTGTCCTGGCCATGAGAACCCGAACATGTCGCCGACGCCGATGAACAGAGTTGATCCAGAAGCCGAAAATCGGTCTGGGGTCGTGAATGGCAATAGCCCAATTGCCGAAAACCCACCGGAGCCGATGAATGAAGATGACCCAGATGAGGAAATTCAGCCGGTGGCGGAGGAGGAGATGCCGGCAGAGATGAGAGATCATATAACGGAAAGAATGGGTGGTTACCGTGTGCAAATGATAATCGAAAAGAAGTTGACGGCGACTGACATGAGGACGAATCAAGGGCGGCTGTCGCTGCCGAAGAAGATGGTGAGAGTGGAATTTATGACGGCGGAGGAGGAGAAGATGTTGGAGCACCGGAGCAAAGGGGAAGATGAATTGAACTACATTGACACATTCATAGTGGGATCCGATTTAAAAGTGAATCCAATTCGGTTCAAGAAGTGGCTAATGGGGAAAAATTACGTGAATTGTTTGGTCAACAAATGGAACTCTTTTGCTAGAGCTTATGGACTCAAGACCGGAACTAAGGTTCGTGTTTGGAGTTTCAGGGTCGATGAAAGGGACGAGAACGACGTTGTTAAATCTGAATTGCGCTTCGCCCTTGTCAAGATTTAA

Protein sequence

MSDNLDSISSSSFQWMDNFNQIVCRKKRTLVEYIDCPGHENPNMSPTPMNRVDPEAENRSGVVNGNSPIAENPPEPMNEDDPDEEIQPVAEEEMPAEMRDHITERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGEDELNYIDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKVRVWSFRVDERDENDVVKSELRFALVKI
Homology
[Close]
BLAST of Cp4.1LG11g10180 vs. Swiss-Prot
Match: Y1592_ARATH (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.3e-07
Identity = 46/168 (27.38%), Postives = 79/168 (47.02%), Query Frame = 1 

Query: 76  PMNEDDPDEEIQPVAEEEMPAEMRDHITERMGGYRVQMIIEKKLTATDMRTNQGRLSLP- 135
           P  +     E  P    + P  +   ++   G    ++IIEK L + D+   Q RLS+P 
Sbjct: 145 PRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPI 204

Query: 136 KKMVRVEFMTAEEEKMLEHRSKGEDELNYIDTFIVGSDLKVNPIRFKKWLM----GKNYV 195
             +++ +F+T +E ++++      +    +  F+V    K   + FK+W M    G +Y 
Sbjct: 205 NTVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYW 264

Query: 196 N-CLVNKWNSFARAYGLKTGTKVRVWSFRVDERDENDVVKSELRFALV 238
           +  L  +W++     GLK G K+ +WSFR      ND+    L FALV
Sbjct: 265 SFVLRGEWSNVVETNGLKEGDKISLWSFR-----SNDI----LCFALV 303

[Close]
BLAST of Cp4.1LG11g10180 vs. Swiss-Prot
Match: Y2467_ARATH (B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana GN=At2g24670 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06
Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 1 

Query: 114 IIEKKLTATDMRTNQGRLSLP-KKMVRVEFMTAEEEKMLEHRSKGEDELNYIDTFIVGSD 173
           II+K+L  TD+  +Q RLS+P  ++V +EF+  EE++ +E           +D  +V S 
Sbjct: 132 IIDKELFQTDVDPHQSRLSIPVSQIVELEFLNHEEKRAIE-EDANRVRKEGVDAILVDSH 191

Query: 174 LKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKVRVWSFRVDE 222
           L+  P+  +   M    +  LV  WN       L+  T +R+WSF  D+
Sbjct: 192 LREFPVNLRLRDMRGILLYNLVAGWNQVVTDCLLEENTNIRLWSFHADD 239

[Close]
BLAST of Cp4.1LG11g10180 vs. TrEMBL
Match: A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.8e-21
Identity = 62/147 (42.18%), Postives = 87/147 (59.18%), Query Frame = 1 

Query: 94  MPAEMRDHITERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKML-E 153
           MP  MRD I E MGGY + ++I+K+LT TD+  N GRLS+  K +  +F T EE K+L E
Sbjct: 124 MPVAMRDRILE-MGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSE 183

Query: 154 HRSKGEDELNYIDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 213
             +K +  +N +   I+   L+   +  KKW +G  YV CL+ KWN      GLK+G ++
Sbjct: 184 QENKNKMGINVM---ILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEI 243

Query: 214 RVWSFRVDERDENDVVKSELRFALVKI 240
           +VWSFR D+ DE       L  ALVK+
Sbjct: 244 QVWSFRKDDEDE----AHRLCLALVKL 262

[Close]
BLAST of Cp4.1LG11g10180 vs. TrEMBL
Match: A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-20
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 1 

Query: 94  MPAEMRDHITERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKML-E 153
           MP  MRD I E MGGY + ++I+K+LT TD+  N GRLS+  K +  +F T EE K+L E
Sbjct: 108 MPVAMRDRILE-MGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSE 167

Query: 154 HRSKGEDELNYIDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 213
             +K +  +N +    V   L+   +  KKW +G  YV CL+ KWN      GLK+G ++
Sbjct: 168 QENKNKMGINVMTLDDV---LEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEI 227

Query: 214 RVWSFRVDERDENDVVKSELRFALVK 239
           +VWSFR D+ DE       L FAL K
Sbjct: 228 QVWSFRKDDEDE----AHRLCFALEK 245

[Close]
BLAST of Cp4.1LG11g10180 vs. TrEMBL
Match: A0A0A0LRL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.3e-17
Identity = 62/197 (31.47%), Postives = 104/197 (52.79%), Query Frame = 1 

Query: 45  SPT-PMNRVDPEAENRSGVVNGNSPIAENPPEPMNEDDPDEEIQPVAEEEMPAEMRDHIT 104
           SPT   ++  P A+ R       SP A+   + M  ++        +  EMPA MRD + 
Sbjct: 68  SPTVKQSKKSPTAKKRK-----TSPTAKQKKKSMELEE--------SFPEMPASMRDRVV 127

Query: 105 ERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGEDE-LN 164
            + GGY +Q++I+K+L  +D+  N GRL LP K V+ EF+  EE  +LE  + G+ +   
Sbjct: 128 GK-GGYEIQLVIQKQLEESDVSRNHGRLCLPAKKVKTEFVREEERNILEEENDGKKKNKK 187

Query: 165 YIDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKVRVWSFRVDER 224
            ++  ++   L+ + +  KKW +G     CL+  WN F    GL++G  +++WSFR    
Sbjct: 188 GLEVGVMDDSLRESSMCLKKWKIGSGKFYCLMKNWNCFVEENGLRSGDYIQLWSFR---- 243

Query: 225 DENDVVKSELRFALVKI 240
              + +  +L FA+VK+
Sbjct: 248 ---NNISDKLCFAIVKL 243

[Close]
BLAST of Cp4.1LG11g10180 vs. TrEMBL
Match: A0A0A0KPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-16
Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = 1 

Query: 106 MGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKML-EHRSKGEDELNYI 165
           M GY + ++I+K+LT TD+  N GRLS+  K +  +F T EE K+L E  +K +  +N +
Sbjct: 5   MCGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINVM 64

Query: 166 DTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKVRVWSFRVDERDE 225
              ++   L+   +  KKW +G   V CL+ KWN      GLK+G +++VWSFR D+ DE
Sbjct: 65  ---LLDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDE 124

Query: 226 NDVVKSELRFALVKI 240
                  L  ALVK+
Sbjct: 125 ----AHRLCLALVKL 132

[Close]
BLAST of Cp4.1LG11g10180 vs. TrEMBL
Match: A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-16
Identity = 60/174 (34.48%), Postives = 89/174 (51.15%), Query Frame = 1 

Query: 66  NSPIAENPPEPMNEDDPDEEIQPVAEEEMPAEMRDHITERMGGYRVQMIIEKKLTATDMR 125
           N PI         +    + +       MP  MRD I E MGGY ++++I+K+LT TD+ 
Sbjct: 99  NPPIPTEASTSKTKKQRKKNVNKREHPPMPVTMRDRILE-MGGYEIRLVIQKELTDTDLN 158

Query: 126 TNQGRLSLPKKMVRVEFMTAEEEKML-EHRSKGEDELNYIDTFIVGSDLKVNPIRFKKWL 185
            N GR S+  K++  +F T EE K+L E  +K +  +N     I+   L+   +  KKW 
Sbjct: 159 KNHGRFSMNTKLLSFDFATEEESKLLSEQENKNKKGIN---VMILDDALEERILCLKKWK 218

Query: 186 MGKNYVNCLVNKWNSFARAYGLKTGTKVRVWSFRVDERDENDVVKSELRFALVK 239
           +G   V CL+ +WN      G K+G +++VWSFR D+  E       L FAL K
Sbjct: 219 IGSGEVYCLMTQWNLMVEKRGFKSGEEIQVWSFRKDDEYE----AHRLCFALEK 264

[Close]
BLAST of Cp4.1LG11g10180 vs. TAIR10
Match: AT1G05920.1 (AT1G05920.1 Domain of unknown function (DUF313) )

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08
Identity = 46/168 (27.38%), Postives = 79/168 (47.02%), Query Frame = 1 

Query: 76  PMNEDDPDEEIQPVAEEEMPAEMRDHITERMGGYRVQMIIEKKLTATDMRTNQGRLSLP- 135
           P  +     E  P    + P  +   ++   G    ++IIEK L + D+   Q RLS+P 
Sbjct: 145 PRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPI 204

Query: 136 KKMVRVEFMTAEEEKMLEHRSKGEDELNYIDTFIVGSDLKVNPIRFKKWLM----GKNYV 195
             +++ +F+T +E ++++      +    +  F+V    K   + FK+W M    G +Y 
Sbjct: 205 NTVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYW 264

Query: 196 N-CLVNKWNSFARAYGLKTGTKVRVWSFRVDERDENDVVKSELRFALV 238
           +  L  +W++     GLK G K+ +WSFR      ND+    L FALV
Sbjct: 265 SFVLRGEWSNVVETNGLKEGDKISLWSFR-----SNDI----LCFALV 303

[Close]
BLAST of Cp4.1LG11g10180 vs. TAIR10
Match: AT2G24670.1 (AT2G24670.1 Domain of unknown function (DUF313) )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 1 

Query: 114 IIEKKLTATDMRTNQGRLSLP-KKMVRVEFMTAEEEKMLEHRSKGEDELNYIDTFIVGSD 173
           II+K+L  TD+  +Q RLS+P  ++V +EF+  EE++ +E           +D  +V S 
Sbjct: 132 IIDKELFQTDVDPHQSRLSIPVSQIVELEFLNHEEKRAIE-EDANRVRKEGVDAILVDSH 191

Query: 174 LKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKVRVWSFRVDE 222
           L+  P+  +   M    +  LV  WN       L+  T +R+WSF  D+
Sbjct: 192 LREFPVNLRLRDMRGILLYNLVAGWNQVVTDCLLEENTNIRLWSFHADD 239

[Close]
BLAST of Cp4.1LG11g10180 vs. NCBI nr
Match: gi|778703844|ref|XP_011655441.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 4.0e-21
Identity = 62/147 (42.18%), Postives = 87/147 (59.18%), Query Frame = 1 

Query: 94  MPAEMRDHITERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKML-E 153
           MP  MRD I E MGGY + ++I+K+LT TD+  N GRLS+  K +  +F T EE K+L E
Sbjct: 124 MPVAMRDRILE-MGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSE 183

Query: 154 HRSKGEDELNYIDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 213
             +K +  +N +   I+   L+   +  KKW +G  YV CL+ KWN      GLK+G ++
Sbjct: 184 QENKNKMGINVM---ILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEI 243

Query: 214 RVWSFRVDERDENDVVKSELRFALVKI 240
           +VWSFR D+ DE       L  ALVK+
Sbjct: 244 QVWSFRKDDEDE----AHRLCLALVKL 262

[Close]
BLAST of Cp4.1LG11g10180 vs. NCBI nr
Match: gi|700196319|gb|KGN51496.1| (hypothetical protein Csa_5G570410 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-20
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 1 

Query: 94  MPAEMRDHITERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKML-E 153
           MP  MRD I E MGGY + ++I+K+LT TD+  N GRLS+  K +  +F T EE K+L E
Sbjct: 108 MPVAMRDRILE-MGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSE 167

Query: 154 HRSKGEDELNYIDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 213
             +K +  +N +    V   L+   +  KKW +G  YV CL+ KWN      GLK+G ++
Sbjct: 168 QENKNKMGINVMTLDDV---LEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEI 227

Query: 214 RVWSFRVDERDENDVVKSELRFALVK 239
           +VWSFR D+ DE       L FAL K
Sbjct: 228 QVWSFRKDDEDE----AHRLCFALEK 245

[Close]
BLAST of Cp4.1LG11g10180 vs. NCBI nr
Match: gi|659072862|ref|XP_008467133.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 1.9e-18
Identity = 58/155 (37.42%), Postives = 87/155 (56.13%), Query Frame = 1 

Query: 86  IQPVAEEEMPAEMRDHITERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTA 145
           ++ +    MP  MRD I E MGGY ++++I+K+LT TD+  N GRLS+  K +  +F T 
Sbjct: 38  VKQIEHPSMPVAMRDRILE-MGGYEIRLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATE 97

Query: 146 EEEKML-EHRSKGEDELNYIDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAY 205
           EE K+L E  +K +  +N     ++   L+   +  KKW +G   V CL+ +WN      
Sbjct: 98  EETKLLSEQENKNKRGIN---VMMLDDVLEERMLCLKKWKIGSGEVYCLMTRWNLMVEER 157

Query: 206 GLKTGTKVRVWSFRVDERDENDVVKSELRFALVKI 240
           G K G +++VWSFR D+  E       L FALVK+
Sbjct: 158 GFKGGEEIQVWSFRKDDEYE----AHRLCFALVKL 184

[Close]
BLAST of Cp4.1LG11g10180 vs. NCBI nr
Match: gi|659089549|ref|XP_008445569.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 4.1e-18
Identity = 59/175 (33.71%), Postives = 96/175 (54.86%), Query Frame = 1 

Query: 71  ENPPEPMNEDDPDEEIQPVAEE------EMPAEMRDHITERMGGYRVQMIIEKKLTATDM 130
           ++P     +  P E+ +  + E      EMPA MRD I    GGY +Q++I+K+L  +D+
Sbjct: 74  KSPTAKQRKKSPSEKQRKKSMELEESFPEMPASMRDRIVGN-GGYEIQLVIQKQLEESDV 133

Query: 131 RTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGEDE-LNYIDTFIVGSDLKVNPIRFKKW 190
             N GRL LP   V+ EF+  EE  +LE  + G+ +    ++  ++G DL+ + +  KKW
Sbjct: 134 SRNHGRLCLPATKVKTEFVREEERNILEEENNGKKKNKKGLEVGVMGDDLRESSMCLKKW 193

Query: 191 LMGKNYVNCLVNKWNSFARAYGLKTGTKVRVWSFRVDERDENDVVKSELRFALVK 239
            +G     CL+  WN F    GL++G  +++WSFR      N+ +  +L FA+VK
Sbjct: 194 KIGSGKFYCLMKNWNCFVEENGLRSGDYIQLWSFR------NNNISDQLCFAIVK 241

[Close]
BLAST of Cp4.1LG11g10180 vs. NCBI nr
Match: gi|700207532|gb|KGN62651.1| (hypothetical protein Csa_2G365090 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-16
Identity = 62/197 (31.47%), Postives = 104/197 (52.79%), Query Frame = 1 

Query: 45  SPT-PMNRVDPEAENRSGVVNGNSPIAENPPEPMNEDDPDEEIQPVAEEEMPAEMRDHIT 104
           SPT   ++  P A+ R       SP A+   + M  ++        +  EMPA MRD + 
Sbjct: 68  SPTVKQSKKSPTAKKRK-----TSPTAKQKKKSMELEE--------SFPEMPASMRDRVV 127

Query: 105 ERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGEDE-LN 164
            + GGY +Q++I+K+L  +D+  N GRL LP K V+ EF+  EE  +LE  + G+ +   
Sbjct: 128 GK-GGYEIQLVIQKQLEESDVSRNHGRLCLPAKKVKTEFVREEERNILEEENDGKKKNKK 187

Query: 165 YIDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKVRVWSFRVDER 224
            ++  ++   L+ + +  KKW +G     CL+  WN F    GL++G  +++WSFR    
Sbjct: 188 GLEVGVMDDSLRESSMCLKKWKIGSGKFYCLMKNWNCFVEENGLRSGDYIQLWSFR---- 243

Query: 225 DENDVVKSELRFALVKI 240
              + +  +L FA+VK+
Sbjct: 248 ---NNISDKLCFAIVKL 243

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g10180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y1592_ARATH4.3e-0727.38B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2... [more]
Y2467_ARATH2.1e-0631.19B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana GN=At2g24670 PE=2... [more]
BLAST of Cp4.1LG11g10180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP87_CUCSA2.8e-2142.18Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1[more]
A0A0A0KUX9_CUCSA1.8e-2042.47Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1[more]
A0A0A0LRL4_CUCSA9.3e-1731.47Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1[more]
A0A0A0KPD7_CUCSA1.6e-1638.52Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1[more]
A0A0A0KSY8_CUCSA2.7e-1634.48Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1[more]
BLAST of Cp4.1LG11g10180 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G05920.12.4e-0827.38 Domain of unknown function (DUF313) [more]
AT2G24670.11.2e-0731.19 Domain of unknown function (DUF313) [more]
BLAST of Cp4.1LG11g10180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703844|ref|XP_011655441.1|4.0e-2142.18PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus][more]
gi|700196319|gb|KGN51496.1|2.6e-2042.47hypothetical protein Csa_5G570410 [Cucumis sativus][more]
gi|659072862|ref|XP_008467133.1|1.9e-1837.42PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo][more]
gi|659089549|ref|XP_008445569.1|4.1e-1833.71PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo][more]
gi|700207532|gb|KGN62651.1|1.3e-1631.47hypothetical protein Csa_2G365090 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR005508DUF313
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g10180.1Cp4.1LG11g10180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005508B3 domain-containing proteinPFAMPF03754DUF313coord: 93..199
score: 6.0
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 113..218
score: 6.
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 114..220
score: 1.2
NoneNo IPR availablePANTHERPTHR31541FAMILY NOT NAMEDcoord: 75..239
score: 3.6
NoneNo IPR availablePANTHERPTHR31541:SF22SUBFAMILY NOT NAMEDcoord: 75..239
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g10180Cla013621Watermelon (97103) v1cpewmB113
Cp4.1LG11g10180ClCG02G017000Watermelon (Charleston Gray)cpewcgB104
Cp4.1LG11g10180Bhi06G001552Wax gourdcpewgoB0114
Cp4.1LG11g10180Carg23006Silver-seed gourdcarcpeB1494
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g10180Cucurbita pepo (Zucchini)cpecpeB139
Cp4.1LG11g10180Cucumber (Gy14) v1cgycpeB0351
Cp4.1LG11g10180Cucurbita maxima (Rimu)cmacpeB171
Cp4.1LG11g10180Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g10180Cucurbita moschata (Rifu)cmocpeB147
Cp4.1LG11g10180Cucurbita moschata (Rifu)cmocpeB721
Cp4.1LG11g10180Wild cucumber (PI 183967)cpecpiB100
Cp4.1LG11g10180Cucumber (Chinese Long) v2cpecuB103
Cp4.1LG11g10180Bottle gourd (USVL1VR-Ls)cpelsiB074
Cp4.1LG11g10180Melon (DHL92) v3.5.1cpemeB099
Cp4.1LG11g10180Cucumber (Gy14) v2cgybcpeB168
Cp4.1LG11g10180Melon (DHL92) v3.6.1cpemedB123
Cp4.1LG11g10180Silver-seed gourdcarcpeB0357
Cp4.1LG11g10180Cucumber (Chinese Long) v3cpecucB0114
Cp4.1LG11g10180Wax gourdcpewgoB0130