ClCG02G017000 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGAGGTTTGCGAAAATCTGAAGTATCTCACAGCGGTAAAGAATAATCAGAAGAGAAAATTTTCCCAAATTGGAAACTGAATCTAGTGTTCGTCGAAATCTTATATTTGGATCGGCGATCGGATTCGCTTAAGAATCAAGCTAGATAAATCTTCACTTAAGATAATTACCCTCCTAACCTTTGACCGGATTTGAAAATTTTCTTATACTACTTCGATTCTTTATTCTAATATTTTTATTAATTTTTTTATAATTTTTTTCTCTCCCTTATTTTTACTAATGACAATTTTTTAATAAAATAAATATGTATTTAATATTTTATTGCATCCAATCCTTTTACATTCAAATTTTCGATTTAATTATTAATATTTTGTTAGAGTAAACCTCAACTTGTTGGTGGAGTGTGTTGCTCTATGTTCAATACACCAATTATAATAGTTAGTATTTCAACTATTTTAACTTACAACGTTAGTATTTCAAATTCCTATTTGTTACGGTGTTACTATATGTTACCGTTCTTACTATTTATTACTCATCCTCTATTTTCTTATTTGTTACATTGTTTACTATTTATTACCTATATTAAAATAGTTTTCACATTAAACATAGATTATTATAACCCATACTAAAATTGTATGAATCTCAAACACATTAATTATTATATCTCACAAATTTAATAGCCAACTCAACACTCCAAAATGTCCCTTAGTCCTGCAACTTTAATGAGTAACAATTTAGTTTATGCACTTTGCAATTTGTAATAATTTAGTCCTTATTATGAAAAATGTTATTCAAATATAATAAAATTTCTCACACGTGTAGATTGATAAATTGATCAGAAATCAATTTTTTCCTTTTTATAAACTATAAAGATCAAGTTGTTACATAACAAAGTTGACACTTAATTTTGAGGAGTTTTTCACAATAAAAACCGAATTGCTATAAATTTGCTATAAATTTCAAAATACAAAGATTAAAATTTTCGTTCACGAGGCGAGCGCCTTATCCATTAGGCCAGGCAAACCCATTTGGCTAGAGTTCTCAAAATAACTTTAATAATAGATTAAGGTTTAAAATCTTTATGATATTATATTTTCTGGCAAATTGTTGATGAATTAAAAATACATTTTACAACCAATATATATATATAGACTACCAAAAATAGGAAAAATAAATTAAACTAAAAATATTGAAGATGCAAAGTTTTAAATCCTATAATAACATGTTATAGTTCAATTAAGAGCCTGTCGAGTTCCCACACTATGAATTTTCTTTTAAAATTTTATATAAAATATGTTCGAATGCTTGCTTATAGCCAACTAAGAATGTCTCTAAAGATAAATTACCAATATAATAAGAAATGGTTAAAATATCAAAGTCCTTGTACTTTGGTATTTAATTTGGGTCTTACTTCATTTTAATTTGCATCATTTTCATTTTTAAACCTCCAAACTTAACTAATAGCACACTTGAAATTTTGTTTTTAGGTTACCATTTATTTTTTACGAGCTTGGTGAAATAATAATAATTATTTGCAATCCACAAAAATATATAACATGATCATGACTTCCACGAATATAGCGAACACTTTCACAAATATTTAATTTAGTCTTTTGAAAAAGAAAATAAACTATTGGAAGTAAAATGATTGAATTTATACTTTCGAACCACATAAAAAAAATATTTTTAATCCACAAATATTATATCTTAGAAATTTTAAAACTTTAATATTTATTAAAGCTGATCATCAATTAACTAACGAAAAATTTAGACCAATATTTGCTTATTTATTTTTATTGATTTAGAGTTGTGTGATTTTTGTTTGGAGGAAGAAAATTACATTTTTGACCCTTGAATTTTAAGTACAATTTTCATTTAGTCTCTAAATTTCAAAATGTTCACACATTTATACTATATTTATTTTCTTTATAAGAAAATATGTTAATTTGAAAAATGGGTTCCATTTAATTACGTGCTTACTACCGTCTAATGAAATGCACAAATTCGTAATCAACTAACCTAATTGGATTGAGGAGAAGAGGGTCATCAATTAGATTATATTGATTATTACTCGAGACCACACCCTCTTTTTTCAAACTTTCCATCATTTACCATTTTTTTTTTGTTATCTAGATCTATATCAATATTTGGTAACACGTATCAATATCCATAATCAGTATCAACATCATATTGGTAATTAGTATCAATAATCTATAACAAGAATCAATATTAATAATCTGTATCGATATCTATAATTATAAAGTTGGGTTTTTTTTCCTATTATTTTTGCTAGACATATTTATGGAAACGATACTTAGTGTTTTTTTCATTATTATTATTTTTGCTAGATATATTTATATAATGTAACGACCCAACTTTTCTAATTAATAGGACTTTTCTAAATCCAATTTACCTAACAATTAAACCAAATAATCTTACACAAAATGCAACTAAGTCCCAATATCTTCCCAACTTCAAACAATGGGTCTAACCTAAACAAATTAAAAAATGAAGGGTTAAAAATCTAATTTTTCAGCCAACAATAACATTCCAAAATATTGTTTACTCATCAAAATCAAAATCGCCTATTTAACCCACTTCAACTTGCTTCCGGTTCCAAAATTACTTCTAACAATTAAAACCAACACCACCCATGGGTAATCATGAAATTACAAGAAAACCCAATCATACTTATCGAAACAATCTGACCAACCTGACCACAAAATAGTCTAGGTCTGACCAACCTGACCAAATCTTAAAATTCCGCCATAATCCACGAAGAACGAATGACATCGACGAAGCTAAACAGAGAGAGAGCAATTCGACAACGAGTTGCAAACGACAGACCAAAGCTCACTGAAATCCAATATTGACTTAAATATATATCTATCTTATTAAGTAAATTACTAGTAGATTTTGTTTGAAATTTGTTTTTTTAATGTCTTTATAGGAAAATTATGCGTGTTTTGTTTCTTTAAAAATTATGATTTTTCTAAATTGAAAATTGGATTAGTGTATTATTTTTTAAGATTATGCTTTTTTTTTTTAATTTTAATTTAAGTATTAATAAAATTTAGTCATTATTGTTAAAAAAAAAATTATAATTTGATCTTTATAGTTTGGAGAGAATTAGAATTTAATGCCTATAGTTTGAAAAATGTTAGAATTTACTCCCTACTTTAAAAACTATTTACAAGAGTTTCATCAAACTATAGGGACTAAATTCTAATTTCAAAAAAACTCTAATTTCTTTTTCCAAATCATTAACTAAATTTGAAATTTAACTAAAAATATTTTTAAAAAAAAAAACTAGATAATTAAAACATAATAAAGTTAGGAAACATAAAATTAACATCAACTAGGAAAAGGAAAAAACAAAAATAAAAAATATTTAAACACACCAGGCAATTTTTCAACTTCAACACTCAGAGGAAACTTAAACAAAAACACAAATGGGTGATAATCCAGAATCCATTAATAAAATGGGTGATAATCCAAAATCCATTAATAAAAAAAACAAAACCACGTCGTTTCTTTATGATGATTTAAAGGAATTTCTCGGCCAGAAAATTCAGAGGAAGAAGAGGTCTTTGATCCAATACATCGACTGCCCTGGCCACCCAGAAACACTACCCGCCACGACCAACAAATGGAGTTGACCTACAATCCCATTTATCCCCAGGGGCGGTGAATGGTGCCAACCCAGTTGCTAAAATGGCAAACAAAGATGACCTAGCTGGTATAATTGAAAACAGGGACAACCCAAATGCTGAAATGACGAACGGAGACGACCCAGAATTGGTAGAAACTCATTGGCGCTGGAAAACAGAGTCGATCTGAATGTTGCAGTGGCGAATGGAGATGACCCAGTTGGTAGAATCTCACCGGCGCCGGAAAGCATAGTCGACCCAGATGTTGCTGTGATGGCGAACAGCAACAACCCTGTTACTAAAATGGCAAATGAAGACGACCAAGCTGGCAGAACTTTGTCGACGTCGGAAAACAGGGACACCCCAAATGGTGAAGTGGCGAACAGAGATGACTCAGTTGGTAGAATCTCACCGGCACAGGAAAACATAGTCGACCCAAATGTTGCAATGGTAAACGGTGACAACTCCGTTGCTGGAATTCCACTAGCACCGAAAAACAGGGTGGATCCGAATGCAGAAATTGAAGCGATAGGGGAGGAGATGCCGACGGATATGAGAGAGTATATAATAGAAAGAATGGGGGGTTATAGGGTGCAAATGATAATCGAAAAAACAACGTCGACGGACATAAGGAAGGATCAGGGGCGGTTGTCGTTGCCGACGAAGAAGTTGAGAGCGCAATTTTTTACGGCGGAGGAGGAGAGGTATTTCATGGATCGAAGCGAGCCAAATAATGGATTGAATTACATTGACACAATCATTGTGGGATCAGATTTGAGAGAGAACCCAATGCAATTCAAGAAGTGGTTGCTTGGGACAAGATTTGTGGATTTTTTCATAAAAAATTGGAACTCTTTTTCCAGAACTTATGGACTCAAAGTTAGAAATAAGGTTTGA ATGGCGGGAGGTTTGCGAAAATCTGAAGTATCTCACAGCGGGGCGGTGAATGGTGCCAACCCAGTTGCTAAAATGGCAAACAAAGATGACCTAGCTGTGGCGAATGGAGATGACCCAGTTGGTAGAATCTCACCGGCGCCGGAAAGCATAGTCGACCCAGATGTTGCTGTGATGGCGAACAGCAACAACCCTGTTACTAAAATGGCAAATGAAGACGACCAAGCTGGCAGAACTTTGTCGACGTCGGAAAACAGGGACACCCCAAATGGTGAAGTGGCGAACAGAGATGACTCAGTTGGTAGAATCTCACCGGCACAGGAAAACATAGTCGACCCAAATGTTGCAATGGTAAACGGTGACAACTCCGTTGCTGGAATTCCACTAGCACCGAAAAACAGGGTGGATCCGAATGCAGAAATTGAAGCGATAGGGGAGGAGATGCCGACGGATATGAGAGAGTATATAATAGAAAGAATGGGGGGTTATAGGGTGCAAATGATAATCGAAAAAACAACGTCGACGGACATAAGGAAGGATCAGGGGCGGTTGTCGTTGCCGACGAAGAAGTTGAGAGCGCAATTTTTTACGGCGGAGGAGGAGAGGTATTTCATGGATCGAAGCGAGCCAAATAATGGATTGAATTACATTGACACAATCATTGTGGGATCAGATTTGAGAGAGAACCCAATGCAATTCAAGAAGTGGTTGCTTGGGACAAGATTTGTGGATTTTTTCATAAAAAATTGGAACTCTTTTTCCAGAACTTATGGACTCAAAGTTAGAAATAAGGTTTGA ATGGCGGGAGGTTTGCGAAAATCTGAAGTATCTCACAGCGGGGCGGTGAATGGTGCCAACCCAGTTGCTAAAATGGCAAACAAAGATGACCTAGCTGTGGCGAATGGAGATGACCCAGTTGGTAGAATCTCACCGGCGCCGGAAAGCATAGTCGACCCAGATGTTGCTGTGATGGCGAACAGCAACAACCCTGTTACTAAAATGGCAAATGAAGACGACCAAGCTGGCAGAACTTTGTCGACGTCGGAAAACAGGGACACCCCAAATGGTGAAGTGGCGAACAGAGATGACTCAGTTGGTAGAATCTCACCGGCACAGGAAAACATAGTCGACCCAAATGTTGCAATGGTAAACGGTGACAACTCCGTTGCTGGAATTCCACTAGCACCGAAAAACAGGGTGGATCCGAATGCAGAAATTGAAGCGATAGGGGAGGAGATGCCGACGGATATGAGAGAGTATATAATAGAAAGAATGGGGGGTTATAGGGTGCAAATGATAATCGAAAAAACAACGTCGACGGACATAAGGAAGGATCAGGGGCGGTTGTCGTTGCCGACGAAGAAGTTGAGAGCGCAATTTTTTACGGCGGAGGAGGAGAGGTATTTCATGGATCGAAGCGAGCCAAATAATGGATTGAATTACATTGACACAATCATTGTGGGATCAGATTTGAGAGAGAACCCAATGCAATTCAAGAAGTGGTTGCTTGGGACAAGATTTGTGGATTTTTTCATAAAAAATTGGAACTCTTTTTCCAGAACTTATGGACTCAAAGTTAGAAATAAGGTTTGA MAGGLRKSEVSHSGAVNGANPVAKMANKDDLAVANGDDPVGRISPAPESIVDPDVAVMANSNNPVTKMANEDDQAGRTLSTSENRDTPNGEVANRDDSVGRISPAQENIVDPNVAMVNGDNSVAGIPLAPKNRVDPNAEIEAIGEEMPTDMREYIIERMGGYRVQMIIEKTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNGLNYIDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLKVRNKV
BLAST of ClCG02G017000 vs. TrEMBL
Match: A0A0A0LRL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 7.6e-12 Identity = 47/143 (32.87%), Postives = 75/143 (52.45%), Query Frame = 1
BLAST of ClCG02G017000 vs. TrEMBL
Match: A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 1
BLAST of ClCG02G017000 vs. TrEMBL
Match: A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.0e-09 Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 1
BLAST of ClCG02G017000 vs. TrEMBL
Match: A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.6e-08 Identity = 39/114 (34.21%), Postives = 60/114 (52.63%), Query Frame = 1
BLAST of ClCG02G017000 vs. NCBI nr
Match: gi|659089549|ref|XP_008445569.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo]) HSP 1 Score: 79.7 bits (195), Expect = 8.3e-12 Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 1
BLAST of ClCG02G017000 vs. NCBI nr
Match: gi|700207532|gb|KGN62651.1| (hypothetical protein Csa_2G365090 [Cucumis sativus]) HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11 Identity = 47/143 (32.87%), Postives = 75/143 (52.45%), Query Frame = 1
BLAST of ClCG02G017000 vs. NCBI nr
Match: gi|659072764|ref|XP_008467039.1| (PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo]) HSP 1 Score: 77.0 bits (188), Expect = 5.4e-11 Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 1
BLAST of ClCG02G017000 vs. NCBI nr
Match: gi|778703844|ref|XP_011655441.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus]) HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09 Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 1
BLAST of ClCG02G017000 vs. NCBI nr
Match: gi|700196319|gb|KGN51496.1| (hypothetical protein Csa_5G570410 [Cucumis sativus]) HSP 1 Score: 69.7 bits (169), Expect = 8.6e-09 Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|