Cp4.1LG11g09300 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g09300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Microtubule binding protein
Location	Cp4.1LG11 : 7914160 .. 7917190 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCTTTGACTTCCCCACTTGTGAGACAAAAAGGGGTTCGGCAACAAGAATTTCAATTCAATCAGTTTCGACCCCTCATAATCTCTCATGGCTATTTAGAGAGAGAAATAGAGAGATTTGTTGAAGACCCACGTTGGTGATTCTTCAATTCAATCAAAATGGTAGCCAAAACCCCACCAAAGCAAAAGAAAATGGTAGCAGCAGCAGCAGCAGCCACTCTCAACCCAGTTCAAGTGAGAGAAACGCTCAAGAAGGTAAGAACACAAAGTTCATGGACTCTGTTTTGATTGAATTGCATAAGGACTCTGTTTTTTATTGTGTTCTAAGTTTTTGGAGAAAGTTTGCAGATCTCATTTGGGTATTTCTTCATTTTTAGCATAGTTTTTCAGCTCAAATGTTGAAAATTTTACATTGTTCTTCATTGGATCTTTTAGCTTTCTCCATTTTTTTGTTCTTTTTTTGGTGGAACAGTTTCAGAAAGGTTCTTTCTTTCATTTCATTATCTTTGTTTCATTTCTCTGAAAATACTGCGAGGAAAGCTGTAGATCCAATCTGGGTTCTTCATTTTCAATACATTTTCTCAGCTAGAAGGTTGAAAATGTAAATTCTTCCTCACTTTCGGGGAAACAAACCCTCCAATCCGACTCTCCACAGTGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGGTTTGCTTTTAGTTTCCCAAAATTGTATCGTATCAATGGAGATGTATTCTTTACTTATAGACCTACGATCATTCCCTAAATTAGCCAACGTTAGACGGGACTCCCTCCCAACAATCCTCAAATGGATCTTCATCCAGTGATGTAAATGAAAATACATTCGTTCTTGTTCATTTTCTGAGAGACAAAACCTCAGCTCAATGAGAACTTGCAATCCAATATATTTTAATACTCCACTCCCATTAAAACTTCAAGATTGAACAAATATTTTAGCAGCTCGTTCTTTTTCTTGTTCTTGGGACTAATTTGGGTTGTGTAGGTGGAAATGTGCATGAGAAGGCTACAAGAACTGCAATTCACAGTAACAGGAGGGAACAAAGTGATATCAGGGGTGAGCCTCAGCCCACGTAGTACCAGAGGCTATCTTAAGACAAGCCTCAGATGTAAACAGGAATCTTTGAGGTTTAATTTCTTGCTATCAATTTGATCGGTTTTGTGTCAAGTTGAGCTTTTTTTGTTTAATACTCAAATGGGTTCTTCTCTGTTTCCATTTTTGAAGGATCAAAAATGGTGGTGGAGGCAGGAAATCTCCTGTGGGGAAGTTTCCAGCTAATGCAGGAGGAGGTCTCTTTCTAAACTTTTAATGCCTTGAATCTTTCCCGTTCTTGCTGTTCTTGCTGGATGAGTTTATTCAGTCGCTCAATTTCAAGAACGGTTTAATGTGCTCGTTAACTACCAATTCTGTGTTAAATAGGTTCTTGAACTTTAAAAACGTTTAATAAGTTTCGAGATTATTCATTATTTTCATTTTGAGCAGGGGAGTGGAAGAGGATGTCTTTACCAGCAATGCTTGTAGGTGAAACCATTGGAGAAATACTGACTGCTAGCAAATTTGCAAGAGAGATGGTTGAAGCTGTTACCATCGACACCAAAAGCACGTCGATGGATGACCCAAAAACTCCATTGACACGACAAAGAAACCGAAGACCAAACCTGGAAGATTCAGAACTAAGAGCAAGAAGGAAAAGAGAGAAGCAAGAGAAGTTACAATCCAAACGAACTGAATCACATTCTCCGTCACTTCAACGAGTTCGGTCCCGGATCAATTTCAAGGTTGTTTCACCTCCGACCAAAAGAGATGTTGTCGATAAAGAGAATGCGCGGTATCTAGCAAACCGAGTGTCACCTAGGAACAGCAGGCCATGGACGAAAAAGACCATACTTTTTCCAAATCCTATATTCCTATCATCATCAGATAACTCCCAACAACCAAAGTTTTGCAGAACAAAGTCTCCAGTCATCACAAAAACTAGACAGCAAACAACTCCACATAAGTTCTTGATCAAGTCTCCAGCGTCAGCTTCAAAGTTTCAGGTGAAGATTAGGAGCCCGCCGGTGGTGATCACACGGTCGCCAACAAAACCAGTACTCTCGAGTAAGCAGTCTCCTCCAAAGGGATCCACTGCCTCCAAGCTGCGTCGGTCATTTTCACCGTCAAGGCTGTTAACTTCGAAGCTGAGGCAACCATTCTCGCCTGCAAGACTTACAGGTTCGAAGCTGAGGCAATCTTTCTCACCTTCAAGACTGGCTGCTAGGTTGGTGTCTCCCCTGAAAAGCAGAAAAAGTGTACAGAAATATGATGGGAACACTAATCTGAGTGGACTGAAACAGAGACCAACCAATATAATACAGATGAGAATTTGAAAGAAGTTGCTCTAAATTATTCTTTCTTTGATATTTTCTCAATGTCCATAGTGTGTTTCTTGTGTTCTTCCTTCATTCCATCACATTGTATCAGCCTGTGAAAATCAATAAAGAAAGTTTCGGTTAACTTCAAGAACAGATGAGACCCATTTACAAAATATGAAGTAAAAGTACTATCAAACAACATTTTGTTTGATATTTTCTCAATGTCCATCCAAGTGGTTGTGTTGTTTGTGATGAAAAAATGATACAGACACGGAAAGAAACAAACCTGTGCCATTTCATATATCATCAAACCAGAATATTGTACACTAATGATACATTTTCTATTCACCACCGGATACAAAATTGAAAAATATGTATCCTTAAAAGCTTCCTCACCCCCCAACAAAATCAATGAAAAAAGAACAAAAACAGATTAGCATATAGCTCAACGTGTCGTCTTTTTCCTTCCCCCCTTTTGAGAATCTGATCATGAGTCAGCAAGGGACCTCTGCATTTCATACACTCCACAAGGACTGCAGAGGAATGGAAAAATGAGCAAATAAACTCAGCTGATGTAGTTTGAAGATGCTATTCTTTCATAACTTCCTTCAGGAGATGATGTTTTCCCTGTTCTCCCTTCCAGCGCCCGAT

mRNA sequence

TCTCCTTTGACTTCCCCACTTGTGAGACAAAAAGGGGTTCGGCAACAAGAATTTCAATTCAATCAGTTTCGACCCCTCATAATCTCTCATGGCTATTTAGAGAGAGAAATAGAGAGATTTGTTGAAGACCCACGTTGGTGATTCTTCAATTCAATCAAAATGGTAGCCAAAACCCCACCAAAGCAAAAGAAAATGGTAGCAGCAGCAGCAGCAGCCACTCTCAACCCAGTTCAAGTGAGAGAAACGCTCAAGAAGGTGGAAATGTGCATGAGAAGGCTACAAGAACTGCAATTCACAGTAACAGGAGGGAACAAAGTGATATCAGGGGTGAGCCTCAGCCCACGTAGTACCAGAGGCTATCTTAAGACAAGCCTCAGATGTAAACAGGAATCTTTGAGGATCAAAAATGGTGGTGGAGGCAGGAAATCTCCTGTGGGGAAGTTTCCAGCTAATGCAGGAGGAGGGGAGTGGAAGAGGATGTCTTTACCAGCAATGCTTGTAGGTGAAACCATTGGAGAAATACTGACTGCTAGCAAATTTGCAAGAGAGATGGTTGAAGCTGTTACCATCGACACCAAAAGCACGTCGATGGATGACCCAAAAACTCCATTGACACGACAAAGAAACCGAAGACCAAACCTGGAAGATTCAGAACTAAGAGCAAGAAGGAAAAGAGAGAAGCAAGAGAAGTTACAATCCAAACGAACTGAATCACATTCTCCGTCACTTCAACGAGTTCGGTCCCGGATCAATTTCAAGGTTGTTTCACCTCCGACCAAAAGAGATGTTGTCGATAAAGAGAATGCGCGGTATCTAGCAAACCGAGTGTCACCTAGGAACAGCAGGCCATGGACGAAAAAGACCATACTTTTTCCAAATCCTATATTCCTATCATCATCAGATAACTCCCAACAACCAAAGTTTTGCAGAACAAAGTCTCCAGTCATCACAAAAACTAGACAGCAAACAACTCCACATAAGTTCTTGATCAAGTCTCCAGCGTCAGCTTCAAAGTTTCAGGTGAAGATTAGGAGCCCGCCGGTGGTGATCACACGGTCGCCAACAAAACCAGTACTCTCGAGTAAGCAGTCTCCTCCAAAGGGATCCACTGCCTCCAAGCTGCGTCGGTCATTTTCACCGTCAAGGCTGTTAACTTCGAAGCTGAGGCAACCATTCTCGCCTGCAAGACTTACAGGTTCGAAGCTGAGGCAATCTTTCTCACCTTCAAGACTGGCTGCTAGGTTGGTGTCTCCCCTGAAAAGCAGAAAAAGTGTACAGAAATATGATGGGAACACTAATCTGAGTGGACTGAAACAGAGACCAACCAATATAATACAGATGAGAATTTGAAAGAAGTTGCTCTAAATTATTCTTTCTTTGATATTTTCTCAATGTCCATAGTGTGTTTCTTGTGTTCTTCCTTCATTCCATCACATTGTATCAGCCTGTGAAAATCAATAAAGAAAGTTTCGGTTAACTTCAAGAACAGATGAGACCCATTTACAAAATATGAAGTAAAAGTACTATCAAACAACATTTTGTTTGATATTTTCTCAATGTCCATCCAAGTGGTTGTGTTGTTTGTGATGAAAAAATGATACAGACACGGAAAGAAACAAACCTGTGCCATTTCATATATCATCAAACCAGAATATTGTACACTAATGATACATTTTCTATTCACCACCGGATACAAAATTGAAAAATATGTATCCTTAAAAGCTTCCTCACCCCCCAACAAAATCAATGAAAAAAGAACAAAAACAGATTAGCATATAGCTCAACGTGTCGTCTTTTTCCTTCCCCCCTTTTGAGAATCTGATCATGAGTCAGCAAGGGACCTCTGCATTTCATACACTCCACAAGGACTGCAGAGGAATGGAAAAATGAGCAAATAAACTCAGCTGATGTAGTTTGAAGATGCTATTCTTTCATAACTTCCTTCAGGAGATGATGTTTTCCCTGTTCTCCCTTCCAGCGCCCGAT

Coding sequence (CDS)

ATGGTAGCCAAAACCCCACCAAAGCAAAAGAAAATGGTAGCAGCAGCAGCAGCAGCCACTCTCAACCCAGTTCAAGTGAGAGAAACGCTCAAGAAGGTGGAAATGTGCATGAGAAGGCTACAAGAACTGCAATTCACAGTAACAGGAGGGAACAAAGTGATATCAGGGGTGAGCCTCAGCCCACGTAGTACCAGAGGCTATCTTAAGACAAGCCTCAGATGTAAACAGGAATCTTTGAGGATCAAAAATGGTGGTGGAGGCAGGAAATCTCCTGTGGGGAAGTTTCCAGCTAATGCAGGAGGAGGGGAGTGGAAGAGGATGTCTTTACCAGCAATGCTTGTAGGTGAAACCATTGGAGAAATACTGACTGCTAGCAAATTTGCAAGAGAGATGGTTGAAGCTGTTACCATCGACACCAAAAGCACGTCGATGGATGACCCAAAAACTCCATTGACACGACAAAGAAACCGAAGACCAAACCTGGAAGATTCAGAACTAAGAGCAAGAAGGAAAAGAGAGAAGCAAGAGAAGTTACAATCCAAACGAACTGAATCACATTCTCCGTCACTTCAACGAGTTCGGTCCCGGATCAATTTCAAGGTTGTTTCACCTCCGACCAAAAGAGATGTTGTCGATAAAGAGAATGCGCGGTATCTAGCAAACCGAGTGTCACCTAGGAACAGCAGGCCATGGACGAAAAAGACCATACTTTTTCCAAATCCTATATTCCTATCATCATCAGATAACTCCCAACAACCAAAGTTTTGCAGAACAAAGTCTCCAGTCATCACAAAAACTAGACAGCAAACAACTCCACATAAGTTCTTGATCAAGTCTCCAGCGTCAGCTTCAAAGTTTCAGGTGAAGATTAGGAGCCCGCCGGTGGTGATCACACGGTCGCCAACAAAACCAGTACTCTCGAGTAAGCAGTCTCCTCCAAAGGGATCCACTGCCTCCAAGCTGCGTCGGTCATTTTCACCGTCAAGGCTGTTAACTTCGAAGCTGAGGCAACCATTCTCGCCTGCAAGACTTACAGGTTCGAAGCTGAGGCAATCTTTCTCACCTTCAAGACTGGCTGCTAGGTTGGTGTCTCCCCTGAAAAGCAGAAAAAGTGTACAGAAATATGATGGGAACACTAATCTGAGTGGACTGAAACAGAGACCAACCAATATAATACAGATGAGAATTTGA

Protein sequence

MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNLEDSELRARRKREKQEKLQSKRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNTNLSGLKQRPTNIIQMRI

Homology

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BLAST of Cp4.1LG11g09300 vs. Swiss-Prot
Match: TANA_ARATH (Microtubule-binding protein TANGLED OS=Arabidopsis thaliana GN=TAN PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.2e-78
Identity = 219/473 (46.30%), Postives = 288/473 (60.89%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TP KQ+K+  A     LN   ++ET+ KV+ CM RLQELQ+T+ GG KV+SGV+LS
Sbjct: 1   MVARTPQKQRKV--AMVVPPLNSDLLKETINKVDKCMERLQELQYTIAGGTKVVSGVNLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTR YLKTSLRCKQE+LRIKN    +KSPVGKFPA++ G +W++MSLPAML+GET+ E
Sbjct: 61  PRSTRIYLKTSLRCKQETLRIKNATN-KKSPVGKFPASSPG-DWRKMSLPAMLLGETVNE 120

Query: 121 ILTASKFAREMVEAVTID--------TKSTSMDDPKTPLTRQRNRRPNLE--DSELRARR 180
           IL AS+  R++V+A+           T S   D PKTP T+Q++R  N E   S ++ARR
Sbjct: 121 ILQASQVTRDIVDAIAPKKSRKSRRLTMSQEDDGPKTPETQQKSREQNPETVSSNIKARR 180

Query: 181 KREKQEKLQSKRTESHSP-SLQRVRSRINFKVVSPPTKRDVVDKENA-RYLANRVSPRNS 240
           K+EKQ    ++R+ES SP SLQR RSRI F+ +SP  K +  + EN+ R+LANRVSP++ 
Sbjct: 181 KKEKQ----NRRSESDSPPSLQRARSRIAFRTISPQVKGN--NGENSFRHLANRVSPKH- 240

Query: 241 RPWTKKTILFPNPIFLSSSDNSQQPKFCRTKSPVITKTR------QQTTPHKFLIKSP-A 300
           +PW KK +LFPNP+F+S +  +QQ KF RT SPVI +         + TP+KFLIKSP  
Sbjct: 241 KPWVKKAVLFPNPLFISGTA-TQQAKFSRTMSPVIARNEISSIKNNKETPYKFLIKSPPT 300

Query: 301 SASKFQVKIRSPPVVI-----------------TRSPTKPVLSSKQSP------------ 360
           SASKFQVKIRSPP V+                 +RSPT+ V   K+S             
Sbjct: 301 SASKFQVKIRSPPKVLVSPTRNGSNSVRKSPRGSRSPTRTVNLGKKSASISPIRNTGKRS 360

Query: 361 PKGSTASKLRRSFSPSRLLTSKLRQ-PFSPARLT--------------GSKLRQSFSPSR 389
           PK STA+KLRRSF+P+R  ++  R+   SP R+T                  + S SP+R
Sbjct: 361 PKLSTAAKLRRSFTPTRNGSNLARKSSISPKRVTLQAFLSPTRNGNFCKKSPKASISPTR 420

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BLAST of Cp4.1LG11g09300 vs. Swiss-Prot
Match: TANB_ARATH (Probable microtubule-binding protein TANGLED OS=Arabidopsis thaliana GN=TAN PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.2e-75
Identity = 203/406 (50.00%), Postives = 267/406 (65.76%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TP KQ+K+  A     LN   ++ET+ KV+ CM RLQELQ+T+ GG KV+SGV+LS
Sbjct: 1   MVARTPQKQRKV--AMVVPPLNSDLLKETINKVDKCMERLQELQYTIAGGTKVVSGVNLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTR YLKTSLRCKQE+LRIKN    +KSPVGKFPA++ G +W++MSLPAML+GET+ E
Sbjct: 61  PRSTRIYLKTSLRCKQETLRIKNATN-KKSPVGKFPASSPG-DWRKMSLPAMLLGETVNE 120

Query: 121 ILTASKFAREMVEAVTID--------TKSTSMDDPKTPLTRQRNRRPNLE--DSELRARR 180
           IL AS+  R++V+A+           T S   D PKTP T+Q++R  N E   S ++ARR
Sbjct: 121 ILQASQVTRDIVDAIAPKKSRKSRRLTMSQEDDGPKTPETQQKSREQNPETVSSNIKARR 180

Query: 181 KREKQEKLQSKRTESHSP-SLQRVRSRINFKVVSPPTKRDVVDKENA-RYLANRVSPRNS 240
           K+EKQ    ++R+ES SP SLQR RSRI F+ +SP  K +  + EN+ R+LANRVSP++ 
Sbjct: 181 KKEKQ----NRRSESDSPPSLQRARSRIAFRTISPQVKGN--NGENSFRHLANRVSPKH- 240

Query: 241 RPWTKKTILFPNPIFLSSSDNSQQPKFCRTKSPVITKTR------QQTTPHKFLIKSP-A 300
           +PW KK +LFPNP+F+S +  +QQ KF RT SPVI +         + TP+KFLIKSP  
Sbjct: 241 KPWVKKAVLFPNPLFISGTA-TQQAKFSRTMSPVIARNEISSIKNNKETPYKFLIKSPPT 300

Query: 301 SASKFQVKIRSPPVVI-----------------TRSPTKPVLSSKQSP------------ 358
           SASKFQVKIRSPP V+                 +RSPT+ V   K+S             
Sbjct: 301 SASKFQVKIRSPPKVLVSPTRNGSNSVRKSPRGSRSPTRTVNLGKKSASISPIRNTGKRS 360

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BLAST of Cp4.1LG11g09300 vs. Swiss-Prot
Match: TAN1_MAIZE (Microtubule-binding protein TANGLED1 OS=Zea mays GN=TAN1 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 8.8e-66
Identity = 189/414 (45.65%), Postives = 240/414 (57.97%), Query Frame = 1


Query: 1   MVAKTP---PKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGV 60
           MVA++P   P ++K  A AAAA LNP  +RETLKKV+ CM RLQELQ+TV GG KV+SGV
Sbjct: 1   MVARSPNAKPDRQKAAALAAAAALNPALLRETLKKVDRCMARLQELQYTVAGGAKVVSGV 60

Query: 61  SLSPRSTRGYLKTSLRCKQESLRIKNGGGGRK-SPVGKFPANAG--GGEWKRMSLPAMLV 120
           SLSPRSTRGYL+TSLRCKQE++R++ G   +K SP GKF    G  G +W+RMSLPAML+
Sbjct: 61  SLSPRSTRGYLRTSLRCKQETVRMRGGASAQKRSPSGKFGGGVGGEGAQWRRMSLPAMLL 120

Query: 121 GETIGEILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNL-EDSELRARRKRE 180
           GET+ EI+ AS+FAR++V A      +T+ + P+TP    R R+P   E + LRARR RE
Sbjct: 121 GETVLEIVQASQFARDIVTA----AGATNREPPRTPKPAPRTRKPAAGEPTPLRARRARE 180

Query: 181 KQEKLQSKRTE----SHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSR 240
           KQ       T     +  PS  RVRSRI FK VSP      V        ANRVSP+N R
Sbjct: 181 KQSHRGGAATRGADAATPPSRSRVRSRIQFKPVSP------VAVGRPSVSANRVSPKN-R 240

Query: 241 PWTKKTILFPNPIFLSSSDNSQQPKFCRTKSPV-----ITKTRQ----QTTPHKFLIKSP 300
           PW KK ++FPNP F +S+  +  P  C T SP      + KTR     + TPHKFL+KSP
Sbjct: 241 PWAKKAVMFPNPTFHASTSAATDP--CATPSPSKKQKRLYKTRSPVAARQTPHKFLVKSP 300

Query: 301 ASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFS 360
            SA   ++++    +     P +P   S   P K                         S
Sbjct: 301 PSALGSKLRMHGKAL-----PARPAAVSPPPPVKAQA----------------------S 360

Query: 361 PARLTGSKLRQSFSPSRLAARLVSPLKSRKSVQKYD------GNTNLSGLKQRP 389
           PA+      R SFSPSRLA RL+SP+K+R S+ +        G   +SGLKQRP
Sbjct: 361 PAKTR----RCSFSPSRLATRLMSPIKARLSLGRSRDSGVGVGGGPMSGLKQRP 370

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BLAST of Cp4.1LG11g09300 vs. TrEMBL
Match: A6YTD5_CUCME (Microtubule binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 4.9e-172
Identity = 356/433 (82.22%), Postives = 373/433 (86.14%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVA----AAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISG 60
           MVAKTPPKQKKMVA    AAAAATLNPVQVRETLKKVEMCM RLQELQFTVTGGNKVISG
Sbjct: 1   MVAKTPPKQKKMVASAAAAAAAATLNPVQVRETLKKVEMCMSRLQELQFTVTGGNKVISG 60

Query: 61  VSLSPRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGG-EWKRMSLPAMLVG 120
           VSLSPRSTR YLKTSLRCKQES+RIKNGGG +KSPVGKFP+NAGGG EWKRMSLPAMLVG
Sbjct: 61  VSLSPRSTRTYLKTSLRCKQESIRIKNGGG-KKSPVGKFPSNAGGGGEWKRMSLPAMLVG 120

Query: 121 ETIGEILTASKFAREMVEAVTIDT--KSTSMDDPKTPLTRQRNRRPNLEDSELRARRKRE 180
           ETIGEILTASKFAREMVEAVT +   K+TSMDDPKTPLTRQRNR+PNLEDSELRARRKRE
Sbjct: 121 ETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKPNLEDSELRARRKRE 180

Query: 181 KQEKLQSKRTES-HSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWT 240
           KQEK QS+R ES HSPSLQRVRSRINFKVVSPPTKRDVVDKENA YLANRVSPRN RPWT
Sbjct: 181 KQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENAGYLANRVSPRN-RPWT 240

Query: 241 KKTILFPNPIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKI-- 300
           KKTILFPNP+FLSS ++SQQPKFCRTKSPVI KTRQQT PHKFLIKSP SASKFQVKI  
Sbjct: 241 KKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTRQQT-PHKFLIKSPVSASKFQVKISP 300

Query: 301 ---------------RSP------------PVVITRSPTKPVLSSKQSPPKGSTASKLRR 360
                          RSP            PVVITRSPT+P++SS +  PK STASKLR 
Sbjct: 301 PVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVITRSPTRPMISSSKLSPKRSTASKLRP 360

Query: 361 SFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNTNLSG 397
           SFSPSRL+ SKLRQPFSPA+LT SKLRQSFSPSRLAARLVSPLKSRKSVQKYDGN N+SG
Sbjct: 361 SFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINVSG 420

[Close]

BLAST of Cp4.1LG11g09300 vs. TrEMBL
Match: B9I7T2_POPTR (Cyclin family protein OS=Populus trichocarpa GN=POPTR_0013s02350g PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.7e-116
Identity = 252/388 (64.95%), Postives = 302/388 (77.84%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TPP+Q+KMVA      LNPV +RET+KKVE CM RLQELQ+TV GGNKVI GVSLS
Sbjct: 1   MVARTPPEQRKMVAP-----LNPVLLRETVKKVERCMARLQELQYTVAGGNKVIDGVSLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTRGYL+TSLRCKQESLR K+    +KSPVGK PA +  GEW+RMSLPAMLVGET+GE
Sbjct: 61  PRSTRGYLRTSLRCKQESLRTKSTAP-KKSPVGKLPATSI-GEWRRMSLPAMLVGETVGE 120

Query: 121 ILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNLEDSELRARRKREKQEKLQS 180
           IL AS+FARE+V AV   TK ++++DPKTP+T+QR +RP+ ED+EL++RRK+EKQ KLQS
Sbjct: 121 ILQASQFAREIVAAVACKTKKSTLEDPKTPVTQQRKQRPHPEDTELKSRRKKEKQTKLQS 180

Query: 181 KRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKTILFPN 240
            R+ES SP L R RSRINFK VSPP K+  VDKENARYLANRVSPRN RPW KKT+LFPN
Sbjct: 181 IRSESDSPCLLRARSRINFK-VSPP-KKSEVDKENARYLANRVSPRN-RPWAKKTVLFPN 240

Query: 241 PIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRS 300
           P+FL S+D++QQ KFC+T+SPVI + ++QTTPHKFLIKSP S SKFQVKI++PPVV + S
Sbjct: 241 PLFL-STDSTQQQKFCKTRSPVIARNKKQTTPHKFLIKSPPSGSKFQVKIKNPPVVCSLS 300

Query: 301 PTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAA 360
           PT+P   S++SP + +  S+                   SP   T SKLR+SFSPSRLA 
Sbjct: 301 PTRPTNLSRKSPTRPTNLSRK------------------SPKLSTASKLRRSFSPSRLAN 358

Query: 361 RLVSPLKSRKSVQKYDGNTNLSGLKQRP 389
           +LVSPLK RK V K DG   +SGLKQRP
Sbjct: 361 KLVSPLKGRKIVLKSDG-LIMSGLKQRP 358

[Close]

BLAST of Cp4.1LG11g09300 vs. TrEMBL
Match: B9RF58_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1431470 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.4e-115
Identity = 258/392 (65.82%), Postives = 303/392 (77.30%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TPPKQ++MVA      LNPV +RET+KKVE CM RLQELQFTV GGNK+ISGVSLS
Sbjct: 1   MVARTPPKQRRMVAP-----LNPVLIRETVKKVEKCMARLQELQFTVAGGNKMISGVSLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTRGYL+TSLRCKQESLRIKN    +KSPVGK PA+   GEWKRMSLPAMLVGET+GE
Sbjct: 61  PRSTRGYLRTSLRCKQESLRIKN-ATPKKSPVGKLPASV-VGEWKRMSLPAMLVGETVGE 120

Query: 121 ILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNLEDSELRARRKREKQEKLQS 180
           IL ASKFA+E+VEAV   TK ++++DP+TP+T+QR  RPN E++EL+++RK+EKQ KLQS
Sbjct: 121 ILQASKFAKEIVEAVACKTKKSTIEDPQTPVTQQRKHRPN-ENTELKSKRKKEKQNKLQS 180

Query: 181 KRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKTILFPN 240
            R ES SP+LQR RSRINFKVVSPP KR V  +   +YLANRVSPRN RPW +KT+LFPN
Sbjct: 181 IRLESTSPTLQRARSRINFKVVSPPKKRAVEKENTPKYLANRVSPRN-RPWARKTVLFPN 240

Query: 241 PIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRS 300
           P+FL S+D++QQ KFCRT+SPVI+ T+ QTTPHKFLIKSP SASKFQVKI+S PVV + S
Sbjct: 241 PLFL-STDSTQQQKFCRTRSPVISTTK-QTTPHKFLIKSPPSASKFQVKIKSSPVV-SIS 300

Query: 301 PTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAA 360
           PT+P   SK+  PK STASKLRR                            SFSPSRLA 
Sbjct: 301 PTRPANFSKKLSPKVSTASKLRR----------------------------SFSPSRLAN 350

Query: 361 RLVSPLKSRK-SVQKYDGNTNLSGLKQRPTNI 392
           RLVSPLK+RK SVQK DG   +SGLKQRP ++
Sbjct: 361 RLVSPLKTRKSSVQKTDG--LMSGLKQRPASM 350

[Close]

BLAST of Cp4.1LG11g09300 vs. TrEMBL
Match: B9MZV3_POPTR (Cyclin family protein OS=Populus trichocarpa GN=POPTR_0005s03620g PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 6.1e-114
Identity = 252/388 (64.95%), Postives = 300/388 (77.32%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TPPKQ+KMV       L+PV +RETLKKV+ CM RLQELQ+TV GGNKVI+GVSLS
Sbjct: 1   MVARTPPKQRKMVVP-----LDPVLIRETLKKVDRCMARLQELQYTVAGGNKVIAGVSLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTRGYL+TSLRCKQESLRIK+ G   KSPVGK PA +  GEW+RMSLPAMLVGET+GE
Sbjct: 61  PRSTRGYLRTSLRCKQESLRIKS-GVPMKSPVGKLPATS-IGEWRRMSLPAMLVGETMGE 120

Query: 121 ILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNLEDSELRARRKREKQEKLQS 180
           IL AS+FARE+V AV   TK  +++DPKTPLT+QR +RP+ ED+EL+++RK+EKQ KLQS
Sbjct: 121 ILQASQFAREIVAAVCCKTKKLTLEDPKTPLTQQRKQRPHPEDTELKSKRKKEKQTKLQS 180

Query: 181 KRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKTILFPN 240
            R+E  SP+LQR RSRINFK VSPP KR+ +DKENARYLANRVSPRN RPW KKT+LFPN
Sbjct: 181 IRSEFGSPTLQRARSRINFK-VSPPKKRE-MDKENARYLANRVSPRN-RPWVKKTVLFPN 240

Query: 241 PIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRS 300
           P+FL S+D++QQ KFC+T+SPVI + ++QTTPHKFLIKSP S SKFQVKI++PP V++ S
Sbjct: 241 PLFL-STDSAQQQKFCKTRSPVIARNKKQTTPHKFLIKSPPSGSKFQVKIKNPP-VLSLS 300

Query: 301 PTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAA 360
           PT+P   SK+S PK STASK RR                            SFSPSRLA 
Sbjct: 301 PTRPTNLSKKS-PKSSTASKFRR----------------------------SFSPSRLAH 345

Query: 361 RLVSPLKSRKSVQKYDGNTNLSGLKQRP 389
           +L+SPLK RK VQK D    +SGLKQRP
Sbjct: 361 KLMSPLKGRKIVQKSD--VLMSGLKQRP 345

[Close]

BLAST of Cp4.1LG11g09300 vs. TrEMBL
Match: A0A0B0MJU3_GOSAR (Putative BTB/POZ domain-containing L85 OS=Gossypium arboreum GN=F383_19800 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.0e-113
Identity = 255/388 (65.72%), Postives = 301/388 (77.58%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TPPKQ+K+V A     L+PV +RET+KKVE CM RLQELQ+TV GG KVISGV LS
Sbjct: 1   MVARTPPKQRKLVVAP----LDPVLLRETVKKVEKCMARLQELQYTVAGGTKVISGVKLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTR YLKTSLRCKQESLR+KN    RKSP+GK P+ A  GEW+RMSLPAMLVGET+GE
Sbjct: 61  PRSTRAYLKTSLRCKQESLRMKNASP-RKSPIGKLPSTAR-GEWRRMSLPAMLVGETVGE 120

Query: 121 ILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNLEDSELRARRKREKQEKLQS 180
           IL AS+FARE++ AV   TK  +++DPKTPLT  R ++   E++EL+ARRKREKQ KLQ 
Sbjct: 121 ILQASQFAREILAAVDNKTKKITVEDPKTPLTEHRKQKQQPENTELKARRKREKQNKLQL 180

Query: 181 KRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKTILFPN 240
            RTES SPSLQR RSRINFKV SP  K   +DKEN R +ANRVSPRN RPW KKT+LFPN
Sbjct: 181 IRTESDSPSLQRARSRINFKVSSPKFKD--LDKENNRLMANRVSPRN-RPWAKKTVLFPN 240

Query: 241 PIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRS 300
           P+F SS+  S+Q KFC+T+SPVI + RQ  TPHKFLIKSP SASKFQVKI+S P V++ S
Sbjct: 241 PLF-SSTPASKQQKFCKTRSPVIARNRQ--TPHKFLIKSPPSASKFQVKIKS-PAVVSLS 300

Query: 301 PTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAA 360
           PT+ +  SK+S PK STASKLRRSFSPSR L ++L  P    +       +SFSPS LA+
Sbjct: 301 PTRSMNMSKKS-PKMSTASKLRRSFSPSR-LANRLVSPLKSRKTLQRSDGRSFSPSHLAS 360

Query: 361 RLVSPLKSRKSVQKYDGNTNLSGLKQRP 389
           RLVSPLKSRK +QK DG   +SG+KQRP
Sbjct: 361 RLVSPLKSRKGLQKSDG--PMSGMKQRP 371

[Close]

BLAST of Cp4.1LG11g09300 vs. TAIR10
Match: AT3G05330.1 (AT3G05330.1 cyclin family)

HSP 1 Score: 285.0 bits (728), Expect = 6.9e-77
Identity = 203/406 (50.00%), Postives = 267/406 (65.76%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TP KQ+K+  A     LN   ++ET+ KV+ CM RLQELQ+T+ GG KV+SGV+LS
Sbjct: 1   MVARTPQKQRKV--AMVVPPLNSDLLKETINKVDKCMERLQELQYTIAGGTKVVSGVNLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTR YLKTSLRCKQE+LRIKN    +KSPVGKFPA++ G +W++MSLPAML+GET+ E
Sbjct: 61  PRSTRIYLKTSLRCKQETLRIKNATN-KKSPVGKFPASSPG-DWRKMSLPAMLLGETVNE 120

Query: 121 ILTASKFAREMVEAVTID--------TKSTSMDDPKTPLTRQRNRRPNLE--DSELRARR 180
           IL AS+  R++V+A+           T S   D PKTP T+Q++R  N E   S ++ARR
Sbjct: 121 ILQASQVTRDIVDAIAPKKSRKSRRLTMSQEDDGPKTPETQQKSREQNPETVSSNIKARR 180

Query: 181 KREKQEKLQSKRTESHSP-SLQRVRSRINFKVVSPPTKRDVVDKENA-RYLANRVSPRNS 240
           K+EKQ    ++R+ES SP SLQR RSRI F+ +SP  K +  + EN+ R+LANRVSP++ 
Sbjct: 181 KKEKQ----NRRSESDSPPSLQRARSRIAFRTISPQVKGN--NGENSFRHLANRVSPKH- 240

Query: 241 RPWTKKTILFPNPIFLSSSDNSQQPKFCRTKSPVITKTR------QQTTPHKFLIKSP-A 300
           +PW KK +LFPNP+F+S +  +QQ KF RT SPVI +         + TP+KFLIKSP  
Sbjct: 241 KPWVKKAVLFPNPLFISGTA-TQQAKFSRTMSPVIARNEISSIKNNKETPYKFLIKSPPT 300

Query: 301 SASKFQVKIRSPPVVI-----------------TRSPTKPVLSSKQSP------------ 358
           SASKFQVKIRSPP V+                 +RSPT+ V   K+S             
Sbjct: 301 SASKFQVKIRSPPKVLVSPTRNGSNSVRKSPRGSRSPTRTVNLGKKSASISPIRNTGKRS 360

[Close]

BLAST of Cp4.1LG11g09300 vs. NCBI nr
Match: gi|778666832|ref|XP_011648821.1| (PREDICTED: microtubule-binding protein TANGLED [Cucumis sativus])

HSP 1 Score: 615.9 bits (1587), Expect = 4.8e-173
Identity = 356/430 (82.79%), Postives = 370/430 (86.05%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVA--AAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVS 60
           MVAKTPPKQKKMVA  AAAAATLNPVQVRETLKKVEMCM RLQELQFTVTGGNKVISGVS
Sbjct: 1   MVAKTPPKQKKMVASAAAAAATLNPVQVRETLKKVEMCMNRLQELQFTVTGGNKVISGVS 60

Query: 61  LSPRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETI 120
           LSPRSTR YLKTSLRCKQESLRIKNGG  +KSPVGKFP+NA GGEWKRMSLPAMLVGETI
Sbjct: 61  LSPRSTRAYLKTSLRCKQESLRIKNGG--KKSPVGKFPSNAVGGEWKRMSLPAMLVGETI 120

Query: 121 GEILTASKFAREMVEAVTIDT--KSTSMDDPKTPLTRQRNRRPNLEDSELRARRKREKQE 180
           GEILTASKFAREMVEAVT ++  K+TSMDDPKTPLTRQRNR+PNLEDSELRARRKREKQE
Sbjct: 121 GEILTASKFAREMVEAVTNNSTNKNTSMDDPKTPLTRQRNRKPNLEDSELRARRKREKQE 180

Query: 181 KLQSKRTES-HSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKT 240
           K QSKR ES HSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRN RPWTKKT
Sbjct: 181 KFQSKRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRN-RPWTKKT 240

Query: 241 ILFPNPIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSP-- 300
           ILFPNP+FLSS + SQQPKFCRTKSPVI KTRQQT PHKFLIKSP SASKFQVKI  P  
Sbjct: 241 ILFPNPLFLSSDNPSQQPKFCRTKSPVIAKTRQQT-PHKFLIKSPVSASKFQVKISPPVV 300

Query: 301 -----------------PVVITRSPTKPVL----------SSKQSPPKGSTASKLRRSFS 360
                            PVVITRSPT+PV+          SSK SP + +  SKLRRSFS
Sbjct: 301 IKRSPTRPVVITRSPRRPVVITRSPTRPVMITRSPTRQISSSKLSPKRSTVVSKLRRSFS 360

Query: 361 PSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNTNLSGLKQ 397
           PSRL+ SKLRQPFSPA+LT SKLRQSFSPSRLAARLVSPLKSRKSVQKYDGN NLSGLKQ
Sbjct: 361 PSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINLSGLKQ 420

[Close]

BLAST of Cp4.1LG11g09300 vs. NCBI nr
Match: gi|659070349|ref|XP_008454676.1| (PREDICTED: microtubule-binding protein TANGLED [Cucumis melo])

HSP 1 Score: 612.1 bits (1577), Expect = 7.0e-172
Identity = 356/433 (82.22%), Postives = 373/433 (86.14%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVA----AAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISG 60
           MVAKTPPKQKKMVA    AAAAATLNPVQVRETLKKVEMCM RLQELQFTVTGGNKVISG
Sbjct: 1   MVAKTPPKQKKMVASAAAAAAAATLNPVQVRETLKKVEMCMSRLQELQFTVTGGNKVISG 60

Query: 61  VSLSPRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGG-EWKRMSLPAMLVG 120
           VSLSPRSTR YLKTSLRCKQES+RIKNGGG +KSPVGKFP+NAGGG EWKRMSLPAMLVG
Sbjct: 61  VSLSPRSTRTYLKTSLRCKQESIRIKNGGG-KKSPVGKFPSNAGGGGEWKRMSLPAMLVG 120

Query: 121 ETIGEILTASKFAREMVEAVTIDT--KSTSMDDPKTPLTRQRNRRPNLEDSELRARRKRE 180
           ETIGEILTASKFAREMVEAVT +   K+TSMDDPKTPLTRQRNR+PNLEDSELRARRKRE
Sbjct: 121 ETIGEILTASKFAREMVEAVTNNNTNKNTSMDDPKTPLTRQRNRKPNLEDSELRARRKRE 180

Query: 181 KQEKLQSKRTES-HSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWT 240
           KQEK QS+R ES HSPSLQRVRSRINFKVVSPPTKRDVVDKENA YLANRVSPRN RPWT
Sbjct: 181 KQEKFQSRRIESSHSPSLQRVRSRINFKVVSPPTKRDVVDKENAGYLANRVSPRN-RPWT 240

Query: 241 KKTILFPNPIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKI-- 300
           KKTILFPNP+FLSS ++SQQPKFCRTKSPVI KTRQQT PHKFLIKSP SASKFQVKI  
Sbjct: 241 KKTILFPNPLFLSSDNSSQQPKFCRTKSPVIAKTRQQT-PHKFLIKSPVSASKFQVKISP 300

Query: 301 ---------------RSP------------PVVITRSPTKPVLSSKQSPPKGSTASKLRR 360
                          RSP            PVVITRSPT+P++SS +  PK STASKLR 
Sbjct: 301 PVVIKRSPTRPVVITRSPTRPVVITRSPTRPVVITRSPTRPMISSSKLSPKRSTASKLRP 360

Query: 361 SFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNTNLSG 397
           SFSPSRL+ SKLRQPFSPA+LT SKLRQSFSPSRLAARLVSPLKSRKSVQKYDGN N+SG
Sbjct: 361 SFSPSRLVASKLRQPFSPAKLTASKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINVSG 420

[Close]

BLAST of Cp4.1LG11g09300 vs. NCBI nr
Match: gi|224123202|ref|XP_002319019.1| (cyclin family protein [Populus trichocarpa])

HSP 1 Score: 427.6 bits (1098), Expect = 2.4e-116
Identity = 252/388 (64.95%), Postives = 302/388 (77.84%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TPP+Q+KMVA      LNPV +RET+KKVE CM RLQELQ+TV GGNKVI GVSLS
Sbjct: 1   MVARTPPEQRKMVAP-----LNPVLLRETVKKVERCMARLQELQYTVAGGNKVIDGVSLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTRGYL+TSLRCKQESLR K+    +KSPVGK PA +  GEW+RMSLPAMLVGET+GE
Sbjct: 61  PRSTRGYLRTSLRCKQESLRTKSTAP-KKSPVGKLPATSI-GEWRRMSLPAMLVGETVGE 120

Query: 121 ILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNLEDSELRARRKREKQEKLQS 180
           IL AS+FARE+V AV   TK ++++DPKTP+T+QR +RP+ ED+EL++RRK+EKQ KLQS
Sbjct: 121 ILQASQFAREIVAAVACKTKKSTLEDPKTPVTQQRKQRPHPEDTELKSRRKKEKQTKLQS 180

Query: 181 KRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKTILFPN 240
            R+ES SP L R RSRINFK VSPP K+  VDKENARYLANRVSPRN RPW KKT+LFPN
Sbjct: 181 IRSESDSPCLLRARSRINFK-VSPP-KKSEVDKENARYLANRVSPRN-RPWAKKTVLFPN 240

Query: 241 PIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRS 300
           P+FL S+D++QQ KFC+T+SPVI + ++QTTPHKFLIKSP S SKFQVKI++PPVV + S
Sbjct: 241 PLFL-STDSTQQQKFCKTRSPVIARNKKQTTPHKFLIKSPPSGSKFQVKIKNPPVVCSLS 300

Query: 301 PTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAA 360
           PT+P   S++SP + +  S+                   SP   T SKLR+SFSPSRLA 
Sbjct: 301 PTRPTNLSRKSPTRPTNLSRK------------------SPKLSTASKLRRSFSPSRLAN 358

Query: 361 RLVSPLKSRKSVQKYDGNTNLSGLKQRP 389
           +LVSPLK RK V K DG   +SGLKQRP
Sbjct: 361 KLVSPLKGRKIVLKSDG-LIMSGLKQRP 358

[Close]

BLAST of Cp4.1LG11g09300 vs. NCBI nr
Match: gi|255542628|ref|XP_002512377.1| (PREDICTED: probable microtubule-binding protein TANGLED [Ricinus communis])

HSP 1 Score: 424.5 bits (1090), Expect = 2.1e-115
Identity = 258/392 (65.82%), Postives = 303/392 (77.30%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TPPKQ++MVA      LNPV +RET+KKVE CM RLQELQFTV GGNK+ISGVSLS
Sbjct: 1   MVARTPPKQRRMVAP-----LNPVLIRETVKKVEKCMARLQELQFTVAGGNKMISGVSLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTRGYL+TSLRCKQESLRIKN    +KSPVGK PA+   GEWKRMSLPAMLVGET+GE
Sbjct: 61  PRSTRGYLRTSLRCKQESLRIKN-ATPKKSPVGKLPASV-VGEWKRMSLPAMLVGETVGE 120

Query: 121 ILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNLEDSELRARRKREKQEKLQS 180
           IL ASKFA+E+VEAV   TK ++++DP+TP+T+QR  RPN E++EL+++RK+EKQ KLQS
Sbjct: 121 ILQASKFAKEIVEAVACKTKKSTIEDPQTPVTQQRKHRPN-ENTELKSKRKKEKQNKLQS 180

Query: 181 KRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKTILFPN 240
            R ES SP+LQR RSRINFKVVSPP KR V  +   +YLANRVSPRN RPW +KT+LFPN
Sbjct: 181 IRLESTSPTLQRARSRINFKVVSPPKKRAVEKENTPKYLANRVSPRN-RPWARKTVLFPN 240

Query: 241 PIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRS 300
           P+FL S+D++QQ KFCRT+SPVI+ T+ QTTPHKFLIKSP SASKFQVKI+S PVV + S
Sbjct: 241 PLFL-STDSTQQQKFCRTRSPVISTTK-QTTPHKFLIKSPPSASKFQVKIKSSPVV-SIS 300

Query: 301 PTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAA 360
           PT+P   SK+  PK STASKLRR                            SFSPSRLA 
Sbjct: 301 PTRPANFSKKLSPKVSTASKLRR----------------------------SFSPSRLAN 350

Query: 361 RLVSPLKSRK-SVQKYDGNTNLSGLKQRPTNI 392
           RLVSPLK+RK SVQK DG   +SGLKQRP ++
Sbjct: 361 RLVSPLKTRKSSVQKTDG--LMSGLKQRPASM 350

[Close]

BLAST of Cp4.1LG11g09300 vs. NCBI nr
Match: gi|566169251|ref|XP_006382599.1| (cyclin family protein [Populus trichocarpa])

HSP 1 Score: 419.1 bits (1076), Expect = 8.7e-114
Identity = 252/388 (64.95%), Postives = 300/388 (77.32%), Query Frame = 1


Query: 1   MVAKTPPKQKKMVAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLS 60
           MVA+TPPKQ+KMV       L+PV +RETLKKV+ CM RLQELQ+TV GGNKVI+GVSLS
Sbjct: 1   MVARTPPKQRKMVVP-----LDPVLIRETLKKVDRCMARLQELQYTVAGGNKVIAGVSLS 60

Query: 61  PRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGE 120
           PRSTRGYL+TSLRCKQESLRIK+ G   KSPVGK PA +  GEW+RMSLPAMLVGET+GE
Sbjct: 61  PRSTRGYLRTSLRCKQESLRIKS-GVPMKSPVGKLPATS-IGEWRRMSLPAMLVGETMGE 120

Query: 121 ILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNLEDSELRARRKREKQEKLQS 180
           IL AS+FARE+V AV   TK  +++DPKTPLT+QR +RP+ ED+EL+++RK+EKQ KLQS
Sbjct: 121 ILQASQFAREIVAAVCCKTKKLTLEDPKTPLTQQRKQRPHPEDTELKSKRKKEKQTKLQS 180

Query: 181 KRTESHSPSLQRVRSRINFKVVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKTILFPN 240
            R+E  SP+LQR RSRINFK VSPP KR+ +DKENARYLANRVSPRN RPW KKT+LFPN
Sbjct: 181 IRSEFGSPTLQRARSRINFK-VSPPKKRE-MDKENARYLANRVSPRN-RPWVKKTVLFPN 240

Query: 241 PIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRS 300
           P+FL S+D++QQ KFC+T+SPVI + ++QTTPHKFLIKSP S SKFQVKI++PP V++ S
Sbjct: 241 PLFL-STDSAQQQKFCKTRSPVIARNKKQTTPHKFLIKSPPSGSKFQVKIKNPP-VLSLS 300

Query: 301 PTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAA 360
           PT+P   SK+S PK STASK RR                            SFSPSRLA 
Sbjct: 301 PTRPTNLSKKS-PKSSTASKFRR----------------------------SFSPSRLAH 345

Query: 361 RLVSPLKSRKSVQKYDGNTNLSGLKQRP 389
           +L+SPLK RK VQK D    +SGLKQRP
Sbjct: 361 KLMSPLKGRKIVQKSD--VLMSGLKQRP 345

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g09300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TANA_ARATH	1.2e-78	46.30	Microtubule-binding protein TANGLED OS=Arabidopsis thaliana GN=TAN PE=1 SV=1	[more]
TANB_ARATH	1.2e-75	50.00	Probable microtubule-binding protein TANGLED OS=Arabidopsis thaliana GN=TAN PE=2...	[more]
TAN1_MAIZE	8.8e-66	45.65	Microtubule-binding protein TANGLED1 OS=Zea mays GN=TAN1 PE=2 SV=1	[more]

BLAST of Cp4.1LG11g09300 vs. TrEMBL


Match Name	E-value	Identity	Description
A6YTD5_CUCME	4.9e-172	82.22	Microtubule binding protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
B9I7T2_POPTR	1.7e-116	64.95	Cyclin family protein OS=Populus trichocarpa GN=POPTR_0013s02350g PE=4 SV=1	[more]
B9RF58_RICCO	1.4e-115	65.82	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1431470 PE=4 SV=1	[more]
B9MZV3_POPTR	6.1e-114	64.95	Cyclin family protein OS=Populus trichocarpa GN=POPTR_0005s03620g PE=4 SV=1	[more]
A0A0B0MJU3_GOSAR	1.0e-113	65.72	Putative BTB/POZ domain-containing L85 OS=Gossypium arboreum GN=F383_19800 PE=4 ...	[more]

BLAST of Cp4.1LG11g09300 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05330.1	6.9e-77	50.00	cyclin family	[more]

BLAST of Cp4.1LG11g09300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778666832\|ref\|XP_011648821.1\|	4.8e-173	82.79	PREDICTED: microtubule-binding protein TANGLED [Cucumis sativus]	[more]
gi\|659070349\|ref\|XP_008454676.1\|	7.0e-172	82.22	PREDICTED: microtubule-binding protein TANGLED [Cucumis melo]	[more]
gi\|224123202\|ref\|XP_002319019.1\|	2.4e-116	64.95	cyclin family protein [Populus trichocarpa]	[more]
gi\|255542628\|ref\|XP_002512377.1\|	2.1e-115	65.82	PREDICTED: probable microtubule-binding protein TANGLED [Ricinus communis]	[more]
gi\|566169251\|ref\|XP_006382599.1\|	8.7e-114	64.95	cyclin family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016043	cellular component organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:1902589	single-organism organelle organization
biological_process	GO:0008150	biological_process
cellular_component	GO:0044430	cytoskeletal part
cellular_component	GO:0015630	microtubule cytoskeleton
cellular_component	GO:0043234	protein complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0005488	binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g09300.1	Cp4.1LG11g09300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 161..181 scor
None	No IPR available	PANTHER	PTHR35728	FAMILY NOT NAMED	coord: 2..296 score: 1.8E-149coord: 319..395 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g09300	Cucsa.091490	Cucumber (Gy14) v1	cgycpeB0168
Cp4.1LG11g09300	CmaCh05G011380	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g09300	CmoCh05G011500	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g09300	Cla019889	Watermelon (97103) v1	cpewmB113
Cp4.1LG11g09300	Csa2G022250	Cucumber (Chinese Long) v2	cpecuB103
Cp4.1LG11g09300	MELO3C004268	Melon (DHL92) v3.5.1	cpemeB099
Cp4.1LG11g09300	CSPI02G03930	Wild cucumber (PI 183967)	cpecpiB100
Cp4.1LG11g09300	Lsi11G005440	Bottle gourd (USVL1VR-Ls)	cpelsiB074
Cp4.1LG11g09300	MELO3C004268.2	Melon (DHL92) v3.6.1	cpemedB123
Cp4.1LG11g09300	CsaV3_2G005250	Cucumber (Chinese Long) v3	cpecucB0114
Cp4.1LG11g09300	BhiUN32G10	Wax gourd	cpewgoB0169
Cp4.1LG11g09300	CsGy2G004020	Cucumber (Gy14) v2	cgybcpeB168
Cp4.1LG11g09300	Carg12904	Silver-seed gourd	carcpeB1252

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g09300	Melon (DHL92) v3.5.1	cpemeB084
Cp4.1LG11g09300	Cucumber (Gy14) v2	cgybcpeB028
Cp4.1LG11g09300	Silver-seed gourd	carcpeB1005
Cp4.1LG11g09300	Cucumber (Chinese Long) v3	cpecucB0100
Cp4.1LG11g09300	Cucurbita pepo (Zucchini)	cpecpeB001
Cp4.1LG11g09300	Cucurbita pepo (Zucchini)	cpecpeB139
Cp4.1LG11g09300	Cucurbita maxima (Rimu)	cmacpeB077
Cp4.1LG11g09300	Cucurbita maxima (Rimu)	cmacpeB171
Cp4.1LG11g09300	Cucurbita moschata (Rifu)	cmocpeB051
Cp4.1LG11g09300	Cucurbita moschata (Rifu)	cmocpeB147
Cp4.1LG11g09300	Wild cucumber (PI 183967)	cpecpiB088
Cp4.1LG11g09300	Bottle gourd (USVL1VR-Ls)	cpelsiB095
Cp4.1LG11g09300	Watermelon (Charleston Gray)	cpewcgB104
Cp4.1LG11g09300	Watermelon (97103) v1	cpewmB104