Carg12904 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12904
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	microtubule-binding protein TANGLED
Location	Cucurbita_argyrosperma_scaffold_043 : 1075691 .. 1077948 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTTCAATTCAATCAAAATGGTAGCCAAAACCCCACCAAAGCAAAAGAAAATGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCCACTCTCAACCCAGTTCAAGTGAGAGAAACGCTCAAGAAGGTAAGAACACAAAGTTCATAGACTCTGTTTTGATTGAATTGCATAAGGACTCTGTTTTTTATTGTGTTCTAAGTTTTTGGAGAAAGTTTGCAGATCTCATTTGGGTATTTCTTCATTTTTAGCGTAGTTTTTCAGCTCAAATGTTGATAATTTTACATTGTTCTTCATTGGATCTTTTAGCTTTCTCCATTTTTTTGTTCTTTTTTTGGTGGAACAGTTTCAGAAAGGTTCTTTCTTTCATTTCATTATCTTTGTTTCATTTCTCTGAAAATACTGCGAGGAAAGCTGTAGATCCAATCTGGGTTCTTCATTTTCATTACATATTCTCAGCTAGAAGGTTGAAAATGTAAATTCTTCCTCACTTTCGGGGAAACAAACCCTCCAATCCGACTCTCCGCGGTAGTATGATATTGTACACTTTGAGCATAAGCTCTCGTGGGTTTGCTTTTAGTTTCCCAAAAATGTATCGTATCAATGGAGATGTATTCTTTACTTGTAGACCTACGATCATTCCCTAAATTAGCCAACGTTGGACGGACTCCCTCCCAACAATCCTCAAATGGATCTTCATCAAGTGATGTAAACGAAAATACATTTGTTCTTCAACCTCAGCTCAATGAGAACTTGCAATCCAATATATTTTAATACTCCGCTGCCATTAAAACTTCAGGATTGAACAAGTAGCTCTTTCTTGTTCTTGTTCTTACATTTTGGGAGTAATTTGGGTTGTGTAGGTGGAAATGTGCATGAGAAGGCTACAAGAACTGCAATTCACAGTAACAGGAGGGAACAAAGTGATATCAGGGGTGAGCCTTAGCCCACGTAGTACCAGAGGCTATCTTAAGACAAGCCTCAGATGTAAACAGGAATCTTTGAGGTTTAATTTCTTGCTATCAATTTGATTGGTTTTGTGTCAAGTTGAGCTTTGTTTGTTAATACTCAAATGGGTTATTCTCTGTTTCCATTTTTGAAGGATCAAAAATGGTGGTGGAGGCAGGAAATCTCCTGTGGGGAAGTTTCCAGCTAATGCAGGAGGAGGTCTCTTTCTAAACTTTTAGTGCCTTGAATCTTTCCTGTTCTTGCTGTTTGTTTCTTGGTCGCCTTTTTAAGGTTGAGTTTATTCAGTCGCTCAATTTCAAGAACGGTTTAATGTGCTCGTTAACTACCAATTCTGTGTTAAATAGGTTCTTGAACTTTAAAAACGTTTAATAAGTTTCGAGATTATTCATTATTTTCATTTTGAGCAGGGGAGTGGAAGAGGATGTCTTTACCAGCAATGCTTGTAGGTGAAACCATTGGAGAAATACTGACTGCTAGCAAATTTGCAAGAGAGATGGTTGAAGCTGTTACCATCGACACCAAAAGCACGTCAATGGATGACCCGAAAACTCCGTTGACACGACAAAGAAACCGAAGACCAAACCTGGAAGATTCAGAACTAAGAGTAAGAAGGAAAAGAGAGAAGCAAGAAAAGTTACAATCCAAACGAACTGAATCGCATTCTCCGTCGCTTCAACGAGTTCGGTCCCGGATCAATTTCAAGGTCGTTTCACCTCCGACCAAAAGAGATGTCATTGATAAAGAGAATGCACGGTATTTAGCAAACCGAGTGTCACCTAGGAACAGCAGGCCATGGACGAAAAAGACCATACTTTTTCCAAATCCTATATTCTTATCATCATCAGATAACTCCCAACAACCAAAGTTCTGCAGAACAAAGTCTCCAGTCATCACAAAAACTAGACAGCAAACAACTCCACATAAGTTCTTGATCAAGTCTCCAGCGTCAGCTTCAAAGTTTCAGGTGAAGATTAGGAGCCCGCCGGTGGTGATCACACGGTCGCCAACAAAACCAGTACTCTCGAGTAAGCAGTCTCCTCCAAAGGGATCCACTGCCTCCAAGCTGCGTCGGTCATTTTCACCGTCAAGGCTGTTAACTTCGAAGCTGAGGCAACCATTCTCACCTGCAAGACTTACAGGTTCCAAGCTGAGGCAATCTTTCTCACCTTCAAGACTGGCTGCTAGGTTGGTGTCTCCCCTGAAAAGCAGAAAAAGTGTACAGAAATATGATGGGAACATTAATCTGAGTGGACTGAAACAGAGACCAACCAATATAATACAGATGAGAATTTGA

mRNA sequence

ATTCTTCAATTCAATCAAAATGGTAGCCAAAACCCCACCAAAGCAAAAGAAAATGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCCACTCTCAACCCAGTTCAAGTGAGAGAAACGCTCAAGAAGGTGGAAATGTGCATGAGAAGGCTACAAGAACTGCAATTCACAGTAACAGGAGGGAACAAAGTGATATCAGGGGTGAGCCTTAGCCCACGTAGTACCAGAGGCTATCTTAAGACAAGCCTCAGATGTAAACAGGAATCTTTGAGGATCAAAAATGGTGGTGGAGGCAGGAAATCTCCTGTGGGGAAGTTTCCAGCTAATGCAGGAGGAGGGGAGTGGAAGAGGATGTCTTTACCAGCAATGCTTGTAGGTGAAACCATTGGAGAAATACTGACTGCTAGCAAATTTGCAAGAGAGATGGTTGAAGCTGTTACCATCGACACCAAAAGCACGTCAATGGATGACCCGAAAACTCCGTTGACACGACAAAGAAACCGAAGACCAAACCTGGAAGATTCAGAACTAAGAGTAAGAAGGAAAAGAGAGAAGCAAGAAAAGTTACAATCCAAACGAACTGAATCGCATTCTCCGTCGCTTCAACGAGTTCGGTCCCGGATCAATTTCAAGGTCGTTTCACCTCCGACCAAAAGAGATGTCATTGATAAAGAGAATGCACGGTATTTAGCAAACCGAGTGTCACCTAGGAACAGCAGGCCATGGACGAAAAAGACCATACTTTTTCCAAATCCTATATTCTTATCATCATCAGATAACTCCCAACAACCAAAGTTCTGCAGAACAAAGTCTCCAGTCATCACAAAAACTAGACAGCAAACAACTCCACATAAGTTCTTGATCAAGTCTCCAGCGTCAGCTTCAAAGTTTCAGGTGAAGATTAGGAGCCCGCCGGTGGTGATCACACGGTCGCCAACAAAACCAGTACTCTCGAGTAAGCAGTCTCCTCCAAAGGGATCCACTGCCTCCAAGCTGCGTCGGTCATTTTCACCGTCAAGGCTGTTAACTTCGAAGCTGAGGCAACCATTCTCACCTGCAAGACTTACAGGTTCCAAGCTGAGGCAATCTTTCTCACCTTCAAGACTGGCTGCTAGGTTGGTGTCTCCCCTGAAAAGCAGAAAAAGTGTACAGAAATATGATGGGAACATTAATCTGAGTGGACTGAAACAGAGACCAACCAATATAATACAGATGAGAATTTGA

Coding sequence (CDS)

ATGGTAGCCAAAACCCCACCAAAGCAAAAGAAAATGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCCACTCTCAACCCAGTTCAAGTGAGAGAAACGCTCAAGAAGGTGGAAATGTGCATGAGAAGGCTACAAGAACTGCAATTCACAGTAACAGGAGGGAACAAAGTGATATCAGGGGTGAGCCTTAGCCCACGTAGTACCAGAGGCTATCTTAAGACAAGCCTCAGATGTAAACAGGAATCTTTGAGGATCAAAAATGGTGGTGGAGGCAGGAAATCTCCTGTGGGGAAGTTTCCAGCTAATGCAGGAGGAGGGGAGTGGAAGAGGATGTCTTTACCAGCAATGCTTGTAGGTGAAACCATTGGAGAAATACTGACTGCTAGCAAATTTGCAAGAGAGATGGTTGAAGCTGTTACCATCGACACCAAAAGCACGTCAATGGATGACCCGAAAACTCCGTTGACACGACAAAGAAACCGAAGACCAAACCTGGAAGATTCAGAACTAAGAGTAAGAAGGAAAAGAGAGAAGCAAGAAAAGTTACAATCCAAACGAACTGAATCGCATTCTCCGTCGCTTCAACGAGTTCGGTCCCGGATCAATTTCAAGGTCGTTTCACCTCCGACCAAAAGAGATGTCATTGATAAAGAGAATGCACGGTATTTAGCAAACCGAGTGTCACCTAGGAACAGCAGGCCATGGACGAAAAAGACCATACTTTTTCCAAATCCTATATTCTTATCATCATCAGATAACTCCCAACAACCAAAGTTCTGCAGAACAAAGTCTCCAGTCATCACAAAAACTAGACAGCAAACAACTCCACATAAGTTCTTGATCAAGTCTCCAGCGTCAGCTTCAAAGTTTCAGGTGAAGATTAGGAGCCCGCCGGTGGTGATCACACGGTCGCCAACAAAACCAGTACTCTCGAGTAAGCAGTCTCCTCCAAAGGGATCCACTGCCTCCAAGCTGCGTCGGTCATTTTCACCGTCAAGGCTGTTAACTTCGAAGCTGAGGCAACCATTCTCACCTGCAAGACTTACAGGTTCCAAGCTGAGGCAATCTTTCTCACCTTCAAGACTGGCTGCTAGGTTGGTGTCTCCCCTGAAAAGCAGAAAAAGTGTACAGAAATATGATGGGAACATTAATCTGAGTGGACTGAAACAGAGACCAACCAATATAATACAGATGAGAATTTGA

Protein sequence

MVAKTPPKQKKMVAAAAAAAAATLNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLRIKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTKSTSMDDPKTPLTRQRNRRPNLEDSELRVRRKREKQEKLQSKRTESHSPSLQRVRSRINFKVVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASKLRRSFSPSRLLTSKLRQPFSPARLTGSKLRQSFSPSRLAARLVSPLKSRKSVQKYDGNINLSGLKQRPTNIIQMRI

Homology

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BLAST of Carg12904 vs. NCBI nr
Match: XP_022946572.1 (microtubule-binding protein TANGLED [Cucurbita moschata])

HSP 1 Score: 617.8 bits (1592), Expect = 2.5e-173
Identity = 373/376 (99.20%), Postives = 375/376 (99.73%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR
Sbjct: 22  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 81

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK 143
           IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK
Sbjct: 82  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK 141

Query: 144 STSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHSPSLQRVRSRINFK 203
           STSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHSPSLQRVRSRINFK
Sbjct: 142 STSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHSPSLQRVRSRINFK 201

Query: 204 VVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS 263
           VVSPPTKRDV+DKENA+YLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS
Sbjct: 202 VVSPPTKRDVVDKENAQYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS 261

Query: 264 PVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK 323
           PVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK
Sbjct: 262 PVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK 321

Query: 324 LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNIN 383
           LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGN N
Sbjct: 322 LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNTN 381

Query: 384 LSGLKQRPTNIIQMRI 400
           LSGLKQRPTNIIQMRI
Sbjct: 382 LSGLKQRPTNIIQMRI 397

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BLAST of Carg12904 vs. NCBI nr
Match: XP_022999347.1 (microtubule-binding protein TANGLED [Cucurbita maxima])

HSP 1 Score: 609.4 bits (1570), Expect = 8.9e-171
Identity = 362/376 (96.28%), Postives = 364/376 (96.81%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQE+LR
Sbjct: 19  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQETLR 78

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK 143
           IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREM+EAVTIDTK
Sbjct: 79  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMIEAVTIDTK 138

Query: 144 STSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHSPSLQRVRSRINFK 203
           S SMDDPKTPLTRQRNRRP LEDSELRVR         QSKRTESHSPSLQRVRSRINFK
Sbjct: 139 SMSMDDPKTPLTRQRNRRPTLEDSELRVRRKREKQEKLQSKRTESHSPSLQRVRSRINFK 198

Query: 204 VVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS 263
           VVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS
Sbjct: 199 VVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS 258

Query: 264 PVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK 323
           PVITKTRQQ TPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK
Sbjct: 259 PVITKTRQQ-TPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK 318

Query: 324 LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNIN 383
           LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNIN
Sbjct: 319 LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNIN 378

Query: 384 LSGLKQRPTNIIQMRI 400
           LSGLKQRPTNIIQMRI
Sbjct: 379 LSGLKQRPTNIIQMRI 393

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BLAST of Carg12904 vs. NCBI nr
Match: XP_023547292.1 (microtubule-binding protein TANGLED [Cucurbita pepo subsp. pepo])

HSP 1 Score: 606.3 bits (1562), Expect = 7.5e-170
Identity = 368/376 (97.87%), Postives = 369/376 (98.14%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR
Sbjct: 21  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 80

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK 143
           IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK
Sbjct: 81  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK 140

Query: 144 STSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHSPSLQRVRSRINFK 203
           STSMDDPKTPLTRQRNRRPNLEDSEL   XXXXXXXXX   RTESHSPSLQRVRSRINFK
Sbjct: 141 STSMDDPKTPLTRQRNRRPNLEDSELXXXXXXXXXXXXXXXRTESHSPSLQRVRSRINFK 200

Query: 204 VVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS 263
           VVSPPTKRDV+DKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS
Sbjct: 201 VVSPPTKRDVVDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS 260

Query: 264 PVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK 323
           PVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK
Sbjct: 261 PVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK 320

Query: 324 LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNIN 383
           LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGN N
Sbjct: 321 LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNTN 380

Query: 384 LSGLKQRPTNIIQMRI 400
           LSGLKQRPTNIIQMRI
Sbjct: 381 LSGLKQRPTNIIQMRI 396

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BLAST of Carg12904 vs. NCBI nr
Match: XP_011648821.1 (PREDICTED: microtubule-binding protein TANGLED [Cucumis sativus])

HSP 1 Score: 496.1 bits (1276), Expect = 1.1e-136
Identity = 327/409 (79.95%), Postives = 338/409 (82.64%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPVQVRETLKKVEMCM RLQELQFTVTGGNKVISGVSLSPRSTR YLKTSLRCKQESLR
Sbjct: 23  LNPVQVRETLKKVEMCMNRLQELQFTVTGGNKVISGVSLSPRSTRAYLKTSLRCKQESLR 82

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDT- 143
           IKN  GG+KSPVGKFP+NA GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVT ++ 
Sbjct: 83  IKN--GGKKSPVGKFPSNAVGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNST 142

Query: 144 -KSTSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTE-SHSPSLQRVRSRI 203
            K+TSMDDPKTPLTRQRNR+PNLEDSELR R XXXXX   QSKR E SHSPSLQRVRSRI
Sbjct: 143 NKNTSMDDPKTPLTRQRNRKPNLEDSELRARRXXXXXEKFQSKRIESSHSPSLQRVRSRI 202

Query: 204 NFKVVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCR 263
           NFKVVSPPTKRDV+DKENARYLANRVSPRN RPWTKKTILFPNP+FLSS + SQQPKFCR
Sbjct: 203 NFKVVSPPTKRDVVDKENARYLANRVSPRN-RPWTKKTILFPNPLFLSSDNPSQQPKFCR 262

Query: 264 TKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSP---------------- 323
           TKSPVI KTRQQ TPHKFLIKSP SASKFQVKI SPPVVI RSP                
Sbjct: 263 TKSPVIAKTRQQ-TPHKFLIKSPVSASKFQVKI-SPPVVIKRSPXXXXXXXXXXXXXXXX 322

Query: 324 --------------TKPVLSSKQSPPKGSTASKLRRSFSXXXXXXXXXXXXXXXXXXXXX 383
                                K SP + +  SKLRRSFS   XXXXXXXXXXXXXXXXXX
Sbjct: 323 XXXXXXXXXXXXXXXXXXXXXKLSPKRSTVVSKLRRSFSPSRXXXXXXXXXXXXXXXXXX 382

Query: 384 XXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNINLSGLKQRPTNIIQMRI 400
           XXXXXXXXXXXXX LVSPLKSRKSVQKYDGNINLSGLKQRP N IQMRI
Sbjct: 383 XXXXXXXXXXXXXXLVSPLKSRKSVQKYDGNINLSGLKQRPINNIQMRI 426

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BLAST of Carg12904 vs. NCBI nr
Match: XP_022150777.1 (microtubule-binding protein TANGLED [Momordica charantia])

HSP 1 Score: 490.7 bits (1262), Expect = 4.6e-135
Identity = 310/381 (81.36%), Postives = 330/381 (86.61%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPV VRETL KVEMCM RLQELQFTVTGGNKVISGVSLSPRSTRGYL+TSLRCKQES+R
Sbjct: 18  LNPVLVRETLNKVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRGYLRTSLRCKQESVR 77

Query: 84  IKNGGGGRKSPVGKFPAN-AGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTID- 143
           IKN GGGRKSPVGKFPAN  GGGEW+RMSLPAMLV ETIGEIL ASKFAREMVEAVT + 
Sbjct: 78  IKN-GGGRKSPVGKFPANEGGGGEWQRMSLPAMLVDETIGEILQASKFAREMVEAVTNNT 137

Query: 144 TKSTSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHSPSLQRVRSRIN 203
           TK+T+MDDPKTPLTRQRNRRPNLEDSELR RXXXXXXXX QSKRTESHSPSLQRVRSRIN
Sbjct: 138 TKNTTMDDPKTPLTRQRNRRPNLEDSELRARXXXXXXXXFQSKRTESHSPSLQRVRSRIN 197

Query: 204 FKVVSPPTKRDVIDKENARYLANRVSPRN-SRPWTKKTILFPNPIFLSSSDNSQQPKFCR 263
           FKVVSPPTKRDV+DKENA+YLANRVS    +RPW+KK +LFPN +FL  SDNSQ PKFCR
Sbjct: 198 FKVVSPPTKRDVVDKENAQYLANRVSSSPWNRPWSKKAVLFPNALFL-PSDNSQPPKFCR 257

Query: 264 TKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPV--LSSKQSPPKG 323
           TKSPVIT+ RQQ TPHKFLIKSPASASKFQVKI+SPPVVITRSPT+P+  LS +QSP K 
Sbjct: 258 TKSPVITRNRQQ-TPHKFLIKSPASASKFQVKIKSPPVVITRSPTRPLVSLSKQQSPKKP 317

Query: 324 STASKLRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKY 383
           +T+SKLRRSFS                XXXXXXXXXXXXXXXXXX LVSPLKSRKSV K+
Sbjct: 318 ATSSKLRRSFS--------------PSXXXXXXXXXXXXXXXXXXXLVSPLKSRKSVHKH 377

Query: 384 DGNINLSGLKQRPTNIIQMRI 400
            G INLSGLKQRPT   QMRI
Sbjct: 378 GGQINLSGLKQRPTT--QMRI 379

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BLAST of Carg12904 vs. TAIR10
Match: AT3G05330.1 (cyclin family)

HSP 1 Score: 263.8 bits (673), Expect = 1.7e-70
Identity = 176/352 (50.00%), Postives = 232/352 (65.91%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LN   ++ET+ KV+ CM RLQELQ+T+ GG KV+SGV+LSPRSTR YLKTSLRCKQE+LR
Sbjct: 19  LNSDLLKETINKVDKCMERLQELQYTIAGGTKVVSGVNLSPRSTRIYLKTSLRCKQETLR 78

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTID-- 143
           IKN    +KSPVGKFPA++  G+W++MSLPAML+GET+ EIL AS+  R++V+A+     
Sbjct: 79  IKN-ATNKKSPVGKFPASS-PGDWRKMSLPAMLLGETVNEILQASQVTRDIVDAIAPKKS 138

Query: 144 ------TKSTSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHS-PSLQ 203
                 T S   D PKTP T+Q++R  N E     ++      XXX ++R+ES S PSLQ
Sbjct: 139 RKSRRLTMSQEDDGPKTPETQQKSREQNPETVSSNIK--ARRKXXXXNRRSESDSPPSLQ 198

Query: 204 RVRSRINFKVVSPPTKRDVIDKENA-RYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNS 263
           R RSRI F+ +SP  K +  + EN+ R+LANRVSP++ +PW KK +LFPNP+F+S +  +
Sbjct: 199 RARSRIAFRTISPQVKGN--NGENSFRHLANRVSPKH-KPWVKKAVLFPNPLFISGT-AT 258

Query: 264 QQPKFCRTKSPVITKT------RQQTTPHKFLIKS-PASASKFQVKIRSPPVVI------ 323
           QQ KF RT SPVI +         + TP+KFLIKS P SASKFQVKIRSPP V+      
Sbjct: 259 QQAKFSRTMSPVIARNEISSIKNNKETPYKFLIKSPPTSASKFQVKIRSPPKVLVSPTRN 318

Query: 324 -----------TRSPTK------------PVLSSKQSPPKGSTASKLRRSFS 330
                      +RSPT+            P+ ++ +  PK STA+KLRRSF+
Sbjct: 319 GSNSVRKSPRGSRSPTRTVNLGKKSASISPIRNTGKRSPKLSTAAKLRRSFT 362

[Close]

BLAST of Carg12904 vs. Swiss-Prot
Match: sp|Q197W8|TANA_ARATH (Microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.1e-70
Identity = 196/451 (43.46%), Postives = 254/451 (56.32%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LN   ++ET+ KV+ CM RLQELQ+T+ GG KV+SGV+LSPRSTR YLKTSLRCKQE+LR
Sbjct: 19  LNSDLLKETINKVDKCMERLQELQYTIAGGTKVVSGVNLSPRSTRIYLKTSLRCKQETLR 78

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTID-- 143
           IKN    +KSPVGKFPA++  G+W++MSLPAML+GET+ EIL AS+  R++V+A+     
Sbjct: 79  IKN-ATNKKSPVGKFPASS-PGDWRKMSLPAMLLGETVNEILQASQVTRDIVDAIAPKKS 138

Query: 144 ------TKSTSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHS-PSLQ 203
                 T S   D PKTP T+Q++R  N E     ++      XXX ++R+ES S PSLQ
Sbjct: 139 RKSRRLTMSQEDDGPKTPETQQKSREQNPETVSSNIK--ARRKXXXXNRRSESDSPPSLQ 198

Query: 204 RVRSRINFKVVSPPTKRDVIDKENA-RYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNS 263
           R RSRI F+ +SP  K +  + EN+ R+LANRVSP++ +PW KK +LFPNP+F+S +  +
Sbjct: 199 RARSRIAFRTISPQVKGN--NGENSFRHLANRVSPKH-KPWVKKAVLFPNPLFISGT-AT 258

Query: 264 QQPKFCRTKSPVITKT------RQQTTPHKFLIKS-PASASKFQVKIRSPPVVI------ 323
           QQ KF RT SPVI +         + TP+KFLIKS P SASKFQVKIRSPP V+      
Sbjct: 259 QQAKFSRTMSPVIARNEISSIKNNKETPYKFLIKSPPTSASKFQVKIRSPPKVLVSPTRN 318

Query: 324 -----------TRSPTK------------PVLSSKQSPPKGSTASKLRRSF--------- 383
                      +RSPT+            P+ ++ +  PK STA+KLRRSF         
Sbjct: 319 GSNSVRKSPRGSRSPTRTVNLGKKSASISPIRNTGKRSPKLSTAAKLRRSFTPTRNGSNL 378

Query: 384 ----------------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 392
                                       S                               
Sbjct: 379 ARKSSISPKRVTLQAFLSPTRNGNFCKKSPKASISPTRVCNKSQKLSTAAKFRRSFSPSR 438

[Close]

BLAST of Carg12904 vs. Swiss-Prot
Match: sp|Q84M91|TANB_ARATH (Probable microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.0e-69
Identity = 176/352 (50.00%), Postives = 232/352 (65.91%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LN   ++ET+ KV+ CM RLQELQ+T+ GG KV+SGV+LSPRSTR YLKTSLRCKQE+LR
Sbjct: 19  LNSDLLKETINKVDKCMERLQELQYTIAGGTKVVSGVNLSPRSTRIYLKTSLRCKQETLR 78

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTID-- 143
           IKN    +KSPVGKFPA++  G+W++MSLPAML+GET+ EIL AS+  R++V+A+     
Sbjct: 79  IKN-ATNKKSPVGKFPASS-PGDWRKMSLPAMLLGETVNEILQASQVTRDIVDAIAPKKS 138

Query: 144 ------TKSTSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHS-PSLQ 203
                 T S   D PKTP T+Q++R  N E     ++      XXX ++R+ES S PSLQ
Sbjct: 139 RKSRRLTMSQEDDGPKTPETQQKSREQNPETVSSNIK--ARRKXXXXNRRSESDSPPSLQ 198

Query: 204 RVRSRINFKVVSPPTKRDVIDKENA-RYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNS 263
           R RSRI F+ +SP  K +  + EN+ R+LANRVSP++ +PW KK +LFPNP+F+S +  +
Sbjct: 199 RARSRIAFRTISPQVKGN--NGENSFRHLANRVSPKH-KPWVKKAVLFPNPLFISGT-AT 258

Query: 264 QQPKFCRTKSPVITKT------RQQTTPHKFLIKS-PASASKFQVKIRSPPVVI------ 323
           QQ KF RT SPVI +         + TP+KFLIKS P SASKFQVKIRSPP V+      
Sbjct: 259 QQAKFSRTMSPVIARNEISSIKNNKETPYKFLIKSPPTSASKFQVKIRSPPKVLVSPTRN 318

Query: 324 -----------TRSPTK------------PVLSSKQSPPKGSTASKLRRSFS 330
                      +RSPT+            P+ ++ +  PK STA+KLRRSF+
Sbjct: 319 GSNSVRKSPRGSRSPTRTVNLGKKSASISPIRNTGKRSPKLSTAAKLRRSFT 362

[Close]

BLAST of Carg12904 vs. Swiss-Prot
Match: sp|Q9FUH9|TAN1_MAIZE (Microtubule-binding protein TANGLED1 OS=Zea mays OX=4577 GN=TAN1 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-53
Identity = 162/393 (41.22%), Postives = 209/393 (53.18%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNP  +RETLKKV+ CM RLQELQ+TV GG KV+SGVSLSPRSTRGYL+TSLRCKQE++R
Sbjct: 24  LNPALLRETLKKVDRCMARLQELQYTVAGGAKVVSGVSLSPRSTRGYLRTSLRCKQETVR 83

Query: 84  IKNGGGGRK-SPVGKFPANAG--GGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTI 143
           ++ G   +K SP GKF    G  G +W+RMSLPAML+GET+ EI+ AS+FAR++V A   
Sbjct: 84  MRGGASAQKRSPSGKFGGGVGGEGAQWRRMSLPAMLLGETVLEIVQASQFARDIVTA--- 143

Query: 144 DTKSTSMDDPKTPLTRQRNRRPNL-EDSELRVRXXXXXXXXXQSKRTE----SHSPSLQR 203
              +T+ + P+TP            E + LR R             T     +  PS  R
Sbjct: 144 -AGATNREPPRTPXXXXXXXXXXXGEPTPLRARRAREKQSHRGGAATRGADAATPPSRSR 203

Query: 204 VRSRINFKVVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQ 263
           VRSRI FK VSP      +        ANRVSP+N RPW KK ++FPNP F +S+  +  
Sbjct: 204 VRSRIQFKPVSP------VAVGRPSVSANRVSPKN-RPWAKKAVMFPNPTFHASTSAATD 263

Query: 264 PKFCRTKSPV-----ITKTRQ----QTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTK 323
           P  C T SP      + KTR     + TPHKFL+KSP SA   ++++    +     P +
Sbjct: 264 P--CATPSPSKKQKRLYKTRSPVAARQTPHKFLVKSPPSALGSKLRMHGKAL-----PAR 323

Query: 324 PVLSSKQSPPK--GSTASKLRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 383
           P   S   P K   S A   R SFS                                  R
Sbjct: 324 PAAVSPPPPVKAQASPAKTRRCSFS----------------------------PSRLATR 370

Query: 384 LVSPLKSRKSV-QKYDGNIN-----LSGLKQRP 392
           L+SP+K+R S+ +  D  +      +SGLKQRP
Sbjct: 384 LMSPIKARLSLGRSRDSGVGVGGGPMSGLKQRP 370

[Close]

BLAST of Carg12904 vs. TrEMBL
Match: tr|A0A1S3BZ63|A0A1S3BZ63_CUCME (microtubule-binding protein TANGLED OS=Cucumis melo OX=3656 GN=LOC103495028 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.1e-127
Identity = 313/410 (76.34%), Postives = 325/410 (79.27%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPVQVRETLKKVEMCM RLQELQFTVTGGNKVISGVSLSPRSTR YLKTSLRCKQES+R
Sbjct: 25  LNPVQVRETLKKVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESIR 84

Query: 84  IKNGGGGRKSPVGKFPANA-GGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTID- 143
           IKN GGG+KSPVGKFP+NA GGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVT + 
Sbjct: 85  IKN-GGGKKSPVGKFPSNAGGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNN 144

Query: 144 -TKSTSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTE-SHSPSLQRVRSR 203
             K+TSMDDPKTPLTRQRNR+PNLEDSELR R         QS+R E SHSPSLQRVRSR
Sbjct: 145 TNKNTSMDDPKTPLTRQRNRKPNLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSR 204

Query: 204 INFKVVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFC 263
           INFKVVSPPTKRDV+DKENA YLANRVSPRN RPWTKKTILFPNP+FLSS ++SQQPKFC
Sbjct: 205 INFKVVSPPTKRDVVDKENAGYLANRVSPRN-RPWTKKTILFPNPLFLSSDNSSQQPKFC 264

Query: 264 RTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSP--------------- 323
           RTKSPVI KTRQQ TPHKFLIKSP SASKFQVKI SPPVVI RSP               
Sbjct: 265 RTKSPVIAKTRQQ-TPHKFLIKSPVSASKFQVKI-SPPVVIKRSPXXXXXXXXXXXXXXX 324

Query: 324 ---------------TKPVLSSKQSPPKGSTASKLRRSFSXXXXXXXXXXXXXXXXXXXX 383
                                                S  XXXXXXXXXXXXXXXXXXXX
Sbjct: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXX 384

Query: 384 XXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNINLSGLKQRPTNIIQMRI 400
           XXXXXXXXXXXXXX LVSPLKSRKSVQKYDGNIN+SGLKQRP N IQMRI
Sbjct: 385 XXXXXXXXXXXXXXXLVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Carg12904 vs. TrEMBL
Match: tr|A6YTD5|A6YTD5_CUCME (Microtubule binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.1e-127
Identity = 313/410 (76.34%), Postives = 325/410 (79.27%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPVQVRETLKKVEMCM RLQELQFTVTGGNKVISGVSLSPRSTR YLKTSLRCKQES+R
Sbjct: 25  LNPVQVRETLKKVEMCMSRLQELQFTVTGGNKVISGVSLSPRSTRTYLKTSLRCKQESIR 84

Query: 84  IKNGGGGRKSPVGKFPANA-GGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTID- 143
           IKN GGG+KSPVGKFP+NA GGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVT + 
Sbjct: 85  IKN-GGGKKSPVGKFPSNAGGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTNNN 144

Query: 144 -TKSTSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTE-SHSPSLQRVRSR 203
             K+TSMDDPKTPLTRQRNR+PNLEDSELR R         QS+R E SHSPSLQRVRSR
Sbjct: 145 TNKNTSMDDPKTPLTRQRNRKPNLEDSELRARRKREKQEKFQSRRIESSHSPSLQRVRSR 204

Query: 204 INFKVVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFC 263
           INFKVVSPPTKRDV+DKENA YLANRVSPRN RPWTKKTILFPNP+FLSS ++SQQPKFC
Sbjct: 205 INFKVVSPPTKRDVVDKENAGYLANRVSPRN-RPWTKKTILFPNPLFLSSDNSSQQPKFC 264

Query: 264 RTKSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSP--------------- 323
           RTKSPVI KTRQQ TPHKFLIKSP SASKFQVKI SPPVVI RSP               
Sbjct: 265 RTKSPVIAKTRQQ-TPHKFLIKSPVSASKFQVKI-SPPVVIKRSPXXXXXXXXXXXXXXX 324

Query: 324 ---------------TKPVLSSKQSPPKGSTASKLRRSFSXXXXXXXXXXXXXXXXXXXX 383
                                                S  XXXXXXXXXXXXXXXXXXXX
Sbjct: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXX 384

Query: 384 XXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGNINLSGLKQRPTNIIQMRI 400
           XXXXXXXXXXXXXX LVSPLKSRKSVQKYDGNIN+SGLKQRP N IQMRI
Sbjct: 385 XXXXXXXXXXXXXXXLVSPLKSRKSVQKYDGNINVSGLKQRPINNIQMRI 430

[Close]

BLAST of Carg12904 vs. TrEMBL
Match: tr|B9RF58|B9RF58_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1431470 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.3e-105
Identity = 243/372 (65.32%), Postives = 281/372 (75.54%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPV +RET+KKVE CM RLQELQFTV GGNK+ISGVSLSPRSTRGYL+TSLRCKQESLR
Sbjct: 16  LNPVLIRETVKKVEKCMARLQELQFTVAGGNKMISGVSLSPRSTRGYLRTSLRCKQESLR 75

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK 143
           IKN    +KSPVGK PA+   GEWKRMSLPAMLVGET+GEIL ASKFA+E+VEAV   TK
Sbjct: 76  IKN-ATPKKSPVGKLPASV-VGEWKRMSLPAMLVGETVGEILQASKFAKEIVEAVACKTK 135

Query: 144 STSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHSPSLQRVRSRINFK 203
            ++++DP+TP+T+QR  RPN E++EL   XXXXXXXX QS R ES SP+LQR RSRINFK
Sbjct: 136 KSTIEDPQTPVTQQRKHRPN-ENTELXXXXXXXXXXXLQSIRLESTSPTLQRARSRINFK 195

Query: 204 VVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRTKS 263
           VVSPP KR V  +   +YLANRVSPRN RPW +KT+LFPNP+FL S+D++QQ KFCRT+S
Sbjct: 196 VVSPPKKRAVEKENTPKYLANRVSPRN-RPWARKTVLFPNPLFL-STDSTQQQKFCRTRS 255

Query: 264 PVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTASK 323
           PVI+ T+ QTTPHKFLIKSP SASKFQVKI+S PVV + SPT+P   SK+  PK STASK
Sbjct: 256 PVISTTK-QTTPHKFLIKSPPSASKFQVKIKSSPVV-SISPTRPANFSKKLSPKVSTASK 315

Query: 324 LRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRK-SVQKYDGNI 383
           LRRSFS                                  RLVSPLK+RK SVQK DG  
Sbjct: 316 LRRSFS----------------------------PSRLANRLVSPLKTRKSSVQKTDG-- 350

Query: 384 NLSGLKQRPTNI 395
            +SGLKQRP ++
Sbjct: 376 LMSGLKQRPASM 350

[Close]

BLAST of Carg12904 vs. TrEMBL
Match: tr|A0A251NYW2|A0A251NYW2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G326100 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.2e-101
Identity = 239/383 (62.40%), Postives = 277/383 (72.32%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPV +RET+KKV+ CM RLQELQ+TV+GG KVISGVSLSPRSTRGYL+TSLRCKQE+ R
Sbjct: 16  LNPVLLRETVKKVDRCMARLQELQYTVSGGTKVISGVSLSPRSTRGYLRTSLRCKQETAR 75

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK 143
           IK G   RKSPVGKFPANA GGEW+RMSLPAMLVGET+GEIL AS+FARE+V AV   TK
Sbjct: 76  IK-GSAPRKSPVGKFPANA-GGEWQRMSLPAMLVGETVGEILQASQFAREIVAAVGSKTK 135

Query: 144 STSMDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHSPSLQRVRSRINFK 203
            T+++DPKTPLT+QR +R   E++ELR  XXXXXXX  QS ++ES SP LQR RSRINFK
Sbjct: 136 KTTVEDPKTPLTQQRKQRQFPENTELRAXXXXXXXXKSQSFQSESGSPILQRARSRINFK 195

Query: 204 VVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSS--SDNSQQPKFCRT 263
            VSPP KR+V+ KEN RYLANRVSP+N RPW KK++LFPNP+FLSS  S  S   KFCRT
Sbjct: 196 -VSPPNKREVL-KENNRYLANRVSPKN-RPWAKKSVLFPNPLFLSSDPSSCSNPQKFCRT 255

Query: 264 KSPVITKTRQQT-----TPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPP 323
           +SP+I +          TPHKFLIKSP SASKFQVKI+SPP+V + SPTK    S    P
Sbjct: 256 RSPIIGRNENNNKPRIQTPHKFLIKSPPSASKFQVKIKSPPLVSSLSPTKIAKKS----P 315

Query: 324 KGSTASKLRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQ 383
           K STASKLRRSFS                                  RLVSPLKSRKSVQ
Sbjct: 316 KMSTASKLRRSFS----------------------------PSRLATRLVSPLKSRKSVQ 360

Query: 384 KYDGNINLSGLKQRPTNIIQMRI 400
           K +G + + GL+QRPT  + + I
Sbjct: 376 KSEGLV-MRGLEQRPTCSVPLGI 360

[Close]

BLAST of Carg12904 vs. TrEMBL
Match: tr|A0A061FA17|A0A061FA17_THECC (Cyclin family isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_026562 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.2e-101
Identity = 241/370 (65.14%), Postives = 269/370 (72.70%), Query Frame = 0


Query: 24  LNPVQVRETLKKVEMCMRRLQELQFTVTGGNKVISGVSLSPRSTRGYLKTSLRCKQESLR 83
           LNPV +RET+KKVE CM RLQELQ+TV GG KVISGVSLSPRSTRGYL+TSLRCKQESLR
Sbjct: 17  LNPVLLRETVKKVEQCMARLQELQYTVAGGTKVISGVSLSPRSTRGYLRTSLRCKQESLR 76

Query: 84  IKNGGGGRKSPVGKFPANAGGGEWKRMSLPAMLVGETIGEILTASKFAREMVEAVTIDTK 143
           IKN    RKS VGKFPA+A GGEW+RMSLPAMLVGET+GEIL AS+FARE++ AV   TK
Sbjct: 77  IKN-ATPRKSLVGKFPASA-GGEWRRMSLPAMLVGETVGEILQASQFAREILAAVDDKTK 136

Query: 144 STS--MDDPKTPLTRQRNRRPNLEDSELRVRXXXXXXXXXQSKRTESHSPSLQRVRSRIN 203
             +   +DPKTPLT    RR   E++ELR RXXXXXXX  Q  RTES SPSLQR RSRIN
Sbjct: 137 KKTGVAEDPKTPLTEHTKRRAQPENTELRARXXXXXXXKLQLIRTESDSPSLQRARSRIN 196

Query: 204 FKVVSPPTKRDVIDKENARYLANRVSPRNSRPWTKKTILFPNPIFLSSSDNSQQPKFCRT 263
           FKV SPP  R+  DKEN R++ANRVSPRN RPW KK +LFPNP+F SS+  SQQ KFC+T
Sbjct: 197 FKVSSPPKFRE-FDKENNRHMANRVSPRN-RPWAKKAVLFPNPLF-SSTPASQQQKFCKT 256

Query: 264 KSPVITKTRQQTTPHKFLIKSPASASKFQVKIRSPPVVITRSPTKPVLSSKQSPPKGSTA 323
           +SPVI + RQ  TPHKFLIKSP SASKFQVKI+SPPVV + SPT+    SK+S PK S A
Sbjct: 257 RSPVIARNRQAQTPHKFLIKSPPSASKFQVKIKSPPVV-SLSPTRSTNISKRS-PKLSAA 316

Query: 324 SKLRRSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVSPLKSRKSVQKYDGN 383
           SKLRRSFS                                  RLVSPLKSRKS QK DG 
Sbjct: 317 SKLRRSFS----------------------------PSRLANRLVSPLKSRKSFQKSDG- 349

Query: 384 INLSGLKQRP 392
             +SGLKQRP
Sbjct: 377 -PMSGLKQRP 349

The following BLAST results are available for this feature:

BLAST of Carg12904 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946572.1	2.5e-173	99.20	microtubule-binding protein TANGLED [Cucurbita moschata]	[more]
XP_022999347.1	8.9e-171	96.28	microtubule-binding protein TANGLED [Cucurbita maxima]	[more]
XP_023547292.1	7.5e-170	97.87	microtubule-binding protein TANGLED [Cucurbita pepo subsp. pepo]	[more]
XP_011648821.1	1.1e-136	79.95	PREDICTED: microtubule-binding protein TANGLED [Cucumis sativus]	[more]
XP_022150777.1	4.6e-135	81.36	microtubule-binding protein TANGLED [Momordica charantia]	[more]

BLAST of Carg12904 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05330.1	1.7e-70	50.00	cyclin family	[more]

BLAST of Carg12904 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q197W8\|TANA_ARATH	2.1e-70	43.46	Microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 ...	[more]
sp\|Q84M91\|TANB_ARATH	3.0e-69	50.00	Probable microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q9FUH9\|TAN1_MAIZE	1.4e-53	41.22	Microtubule-binding protein TANGLED1 OS=Zea mays OX=4577 GN=TAN1 PE=2 SV=1	[more]

BLAST of Carg12904 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZ63\|A0A1S3BZ63_CUCME	1.1e-127	76.34	microtubule-binding protein TANGLED OS=Cucumis melo OX=3656 GN=LOC103495028 PE=4...	[more]
tr\|A6YTD5\|A6YTD5_CUCME	1.1e-127	76.34	Microtubule binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|B9RF58\|B9RF58_RICCO	7.3e-105	65.32	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1431470 PE=4 SV=1	[more]
tr\|A0A251NYW2\|A0A251NYW2_PRUPE	2.2e-101	62.40	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G326100 PE=4 SV=1	[more]
tr\|A0A061FA17\|A0A061FA17_THECC	2.2e-101	65.14	Cyclin family isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_026562 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12904-RA	Carg12904-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 164..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..330
None	No IPR available	PANTHER	PTHR35728	FAMILY NOT NAMED	coord: 339..396 coord: 1..341
None	No IPR available	PANTHER	PTHR35728:SF3	SUBFAMILY NOT NAMED	coord: 339..396 coord: 1..341

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12904	Cla019889	Watermelon (97103) v1	carwmB0907
Carg12904	Csa2G022250	Cucumber (Chinese Long) v2	carcuB0917
Carg12904	MELO3C004268	Melon (DHL92) v3.5.1	carmeB0893
Carg12904	ClCG02G015810	Watermelon (Charleston Gray)	carwcgB0883
Carg12904	CSPI02G03930	Wild cucumber (PI 183967)	carcpiB0938
Carg12904	Cucsa.091490	Cucumber (Gy14) v1	carcgyB1020
Carg12904	CmaCh05G011380	Cucurbita maxima (Rimu)	carcmaB1246
Carg12904	CmoCh05G011500	Cucurbita moschata (Rifu)	carcmoB1216
Carg12904	Lsi11G005440	Bottle gourd (USVL1VR-Ls)	carlsiB822
Carg12904	Cp4.1LG11g09300	Cucurbita pepo (Zucchini)	carcpeB1252
Carg12904	CsGy2G004020	Cucumber (Gy14) v2	carcgybB0890
Carg12904	MELO3C004268.2	Melon (DHL92) v3.6.1	carmedB0900
Carg12904	CsaV3_2G005250	Cucumber (Chinese Long) v3	carcucB0940
Carg12904	Cla97C02G041550	Watermelon (97103) v2	carwmbB0946
Carg12904	BhiUN32G10	Wax gourd	carwgoB1051

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12904	Watermelon (97103) v2	carwmbB0949
Carg12904	Silver-seed gourd	carcarB587
Carg12904	Cucurbita maxima (Rimu)	carcmaB1241
Carg12904	Cucurbita moschata (Rifu)	carcmoB1212
Carg12904	Cucurbita pepo (Zucchini)	carcpeB1256