Cp4.1LG11g07920 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG11g07920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG11 : 6427511 .. 6432881 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAACGACGACGTTTAGGATAATAAACTGGCGCCATATATTGTCAATCTCTTCTTCACTTGGGTTGCCGGCGGCAGGAATCATTCAGCCTTCGTTTGGATTGCGTTCTGGAGCCGCCGCTGCCTTCACAACTTTCCCGATCACCAGATTCAATTTTCCGATAACATGCTTCTTCTGTCACCATTGCCTCTCTCTACTCGCTTTCCTGCAACTCAATTACCTTCTCCCACCGTCTTCCTCCACCACCAGAACCCCCCTATCACTACCCACCTCTCATTTCCCATCATCTCCGCCGCCGCGGCCTCCACCACCTCCTTCTCCTCCGTCGTCACCTGTTCCACTTCATCCGACGCGCTCGAGCTCGACGTTTTCGAAAACGACCACGTTTCTTTTCAGAGTCGCCGTTACGACTTCACTCCTCTCCTCGACTTCCTTTCCCGGTCTCCGGCTTATCCGAAGTCCGATTCCGATTCGGAGGTGGAATTCGACTCTGTTTTGGACTCTGATTCTGAGTCTGATAAGGCTTCTCCGACCTCCCTTGACCCTACCGAGTTCCAGCTTGCCGAGACCTACAGGGCCGTGCCGGCGCCTCTATGGCACTCTCTGCTTAAGTCTCTTTGCGCTTCTTCCTCTTCGATTGGGCTAGGTTACGCGGTTGTTTTGTGGCTTCAGAAGCATAATCTGTGCTTCTCTTACGAATTGCTTTACTCGATTCTCATTCATGCTCTTGGCCGCTCTGAGAAGCTCTATGAGGCTTTCATTCTCTCCCAGAGCCAAACCCTAACCCCATTAACGTATAATGCTCTCATTGGTGCCTGTGCTCGCAATAACGATTCGGAGAAGGCTCTCAATTTGATATCTAGGATGCGACAGGATGGTTATCAATCTGATTTTGTCAACTATAGTTTGATTATTCAGTCGCTTACTCGCACCAATAAGATTGATGTTCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAACTCGATGGGCAGCTCCTCAACGATATCATATTGGGCTTCGCGAAAGCTGGAGATCCTAACCGAGCTCTGTATTTCTTGTCCATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTTGTTGCGATTATCTCTGCTTTGGGAAATTATGGGCGGACAGAGGAAGCTGAGGCTATCTTTGAGGAAATGAAGGAAGGTGGATTGAAACCAAGGATTAAGGCCTTCAATGCTCTTCTTAAAGGCTATGCTAAAAAGGGTTCTCTGAAAGAGGCAGAATCCATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGATGAGCACACATATGGTCTTCTCGTTGATGCATATGCAAATGTGGGGAGTTGGCAAAGTGCAAGACAATTGTTGAAACAAATGGAAGCTAGAAATGTACAGCCTAATACCTTCATTTTCAGTAGGATTTTAGCTAGTTATCGTGACCGGGGCGAATGGCAGAAAACGTTTGAAGTTTTGAGGGAAATGAAGAACTGCAATGTCAAACCTGATAGGCATTTTTACAATGTCATGATTGATACGTTTGGGAAGTTCAATTGTGTTGATCATGCCATGGAAACATACGAACGGATGCTCTCCGAGGGGATCGAACCAGATGTTGTTACTTGGAACACGCTTATAGATTGTCATCGTAAGCACGGATACCATGAAAGGGCTGCAGAGTTGTTCGAAGAAATGCAGGAACGTGGTTACTTTCCTTGTCCCACAACGTATAATATTATGATCAATTCATTAGGTGAGCAGGAAAAGTGGGACGAGGTGAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGCTTACTTCCCAATGTGATAACATACACTACCCTTGTTGATATATATGGACAATCTGGAAGGTTTAATGACGCCATTGAGTGCTTGGAGGCCATGAAGTCTGCTGGACTGAAACCATCCTCAACAATGTATAATGCTTTAATCAATGCCTTTGCTCAAAAAGTATGTCATCCTTCCCGCATTTCATCTCACAAATTGTTTGGTATACATATTCTTCTTTGAAAAATCGATGATGATATTCACTGCTGAAGTTCCAATAAAAAGATACCCACTGTTGGAACATATTTCCCATGTATTGATAAGTTACTTGTTCATAAGTTCATACTTTTTTTCTCCTTTTCTGATATATTGTTGTTCAAATGGATGGAAACATTTGGAACAAAATAATTTTATATATAGTTTCATTGCTTGATAACATGATACAGCCAGTATACCATCTGATTTGGAGCTTTTGTATCTGAGTAATATTTTTTTTGTATAAAGTCTCATCTTTCATTGGACCATGACGAGATTCGCCTCCTGAATCATGGTTGAAATTATAAAATTTATATATCCAAATATATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACACCCTTTATAAAGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAATCTTAAGGGAAAGCGCAGATGACAATATTTGCTAGCGGTGGGCTTGGGTGTTACGTATATATTTTAATTTGTTTCTTGAAAATCCATTTAGTGATCTTCCATTTTTATCATTTGGCAGGGTTTGTCAGAGCAGGCAGTAAATGCATATAGAGTCATGAGATCAGATGGACTAAAACCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCATTTGGCGAGGATAGGAGAGACATTGAAGCCTTTACAATCTTGCAGTACATGAAGGAAAATGTAGGTGCAGTATATTTACAATAACGTTTTCATATTTTTTATTCTTAATATCAAGAGTAAGGCTTATCCATTCATCATTCGAACTTATTTGGTCCTACCTTCTACTGCAGGATGTGAAGCCTGACGTTGTCACATATACAACACTTATGAAAGCTTTGATTCGTGTTGAAAAGTTTGACAAGGTAGAAGAATATAACCCTACAGCTATTTTTCATAATTTGCTCATGTTATTTTATGCATAAATTTTGCGTATTTGGCAAATATGTGTTAGAAACCACGACCCACTACAATGGTATGATATTGTCCTCTTTGAGCATTAACTCTCATGGATTTGATTTTGGTTTTCCCAAAAGGCCTTGTACCAATGGAGAATTGGAGATGTATTCCTTACTTATAAGCTCATGATCAACCCCTTTAATTAGCATGGGACTCCTCTCCTAACAATCCTCAACAATCCTCCCCTCAAACAAAGTACATCATAGAGCCTCCCTTGAGGCCTATGGAGTCCTCGAACAACCTCCCCTTAATCGAGACTCGACTTCTTCTCTGGAGCTATCGAACAAAGTACACCTTGTGTTCGACACTTGAGTCACTTTTGACTACATTTTCGAGTCTCACAACTCCTTTGTTCTACATTTGAGGATTTTATTGAAATGTCTAAGTTAAGGACATGACTCTAATACCATGTTAGGAACCACGACCCTCCACAATGGTATGATATTGTCCACTTTGAGCATTAGCTCTCATGACTTTGCTGCATTTGGTTTTTTCAAAAGATCTCATACCAATGGGGATGTATTTCTTATTTATAAACTCATGATCAATCCCTTAATTAGCCGATATGGGACTCCTCTCCCAACAATTCTCAACAATATGACCTCAGATTGTTCATCAAATTGGAGCCTACTCAATGTCTTCTACAATGTTTTCCGTTGTTTTTTAGGGAGATATTGTGAAGATTAAATATTAAAAAATGAAGCTGGACTAGTTTTGCAAATTGGATGAAAAACTTTTGATGTCTTAGCTTTTGCTAGTCGTCCCGGTTGCAGCATTTCTCATTTCTTATACGAACACATCATCGAATAGAAACTTGTGACAAATTGCTTTCTACAGCTCCCTGTGCTTTGTTTCATATCACCCGGCAACCTCAAATTTCATGTTTTCAATTCTCAGTTTTGAAATAGAGAAAAAGAGAGAATGTTAAAGATTGAAAGTACATTATTTGAGTTTCAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCTGATGGAAAGGCCAGAGCCATGTTGCGGTCTGCCCTCAAATACATGAAGCGTACACTAAGCTTATAGTTGGCCGCTTGATCATGTATCTATGCACTCTGTAGAACAAATTTGCAGGAGTTTATCAAACCAATACTCATAGGTACGTACCGGAGGCTTCAAGATGTGATGTTCTTGACAGTTTCATAATTAATTGGTATCAAAGTCCACAATTTCTTGGGAATTCATGTATTAATGTATGAATTAATGCTCATATTTCATGAATTAATGTTTTGTGTCTGCCCTGGAATGGTTTTGCAGGAATTGCCTATTCAAGCTCTGAGTCATTTCTTATGACTTGGAGAAGAGAAAGGTTTGATCTTACACTAATAGTATGGCATTATACTATCAGCAAAAAGTTGACATTTCTGAAGTAGAACTGCCAATCACCCCTTAAATGATACAGCTCCACCGTACCCGGCCGCCAGGTGCCGGTCTTAGAAACGCCAGGCAAATTCCCATCTATTGATAATTCTTGTATTATTGTTTATATAACATATTCACCATTCTTATGTCATACAGTAAAATGCAGAAGCAATAGTTGATCCAAGGACCTCAATACGTGAGTTCTTTTCTTTCTTTGAATGGTCTGCTTAATCAGTCTGTCTTTGTATCGTTTAATGATATTGGTCGATAGGTTGCAATATTGAGTAAAATGCAGAAGAAATCATTGATCCAAGGACCTCAATACGTGAGTTCTTTTCTTTCTTTGAATGATTTGCTAAATCAGTCTGTTTTTGTAGCGTTTAAAGATAGAAACTTCGACGTAGGTTGATAGGTTGCAATATTGAGTAAAATGCAGAAGAAATCATTGATCCAAGGACCTCAATATGTGAGTTCTTTTCCGTTCTTTTCTTTCTTTGAATGATCTGTTAAATCAGTCTGTTTTTGTATCGTTTAAAGATAGAAACTTCGACATAGGTCGATAGAATTCAATCATCTGTGCTTGTTTAGAGTAGGTGTGGCAATAAACATATGGAGTCCAGAAACTAAACACATCTTTCTGAATGTATCTGTCAAAGGGAAATAGCAGAAACAAGTGGTCTAAACTTGTTCTTAGAAAGTCTGGAACAAAACATGAACATCAATAAGACTGACGACAACAAGAATAGCCTAAAATAAGTTCTCATTTCTTGCATCCCTAGCTCAAACACCTCCCTCTTCTTCCCATATCTGCTACTCCTCTCAATCAAGTAACCTTCAAGATAATCATCAATCGACACCAGCTTGTCTAAGTTGCCCCTTGAACGGAGCTCGGTCTTGTCAAGGTACTCTGGACCGAGCTTAAAGATTGTAAAAAACGCAGCAGA

mRNA sequence

CGAACGACGACGTTTAGGATAATAAACTGGCGCCATATATTGTCAATCTCTTCTTCACTTGGGTTGCCGGCGGCAGGAATCATTCAGCCTTCGTTTGGATTGCGTTCTGGAGCCGCCGCTGCCTTCACAACTTTCCCGATCACCAGATTCAATTTTCCGATAACATGCTTCTTCTGTCACCATTGCCTCTCTCTACTCGCTTTCCTGCAACTCAATTACCTTCTCCCACCGTCTTCCTCCACCACCAGAACCCCCCTATCACTACCCACCTCTCATTTCCCATCATCTCCGCCGCCGCGGCCTCCACCACCTCCTTCTCCTCCGTCGTCACCTGTTCCACTTCATCCGACGCGCTCGAGCTCGACGTTTTCGAAAACGACCACGTTTCTTTTCAGAGTCGCCGTTACGACTTCACTCCTCTCCTCGACTTCCTTTCCCGGTCTCCGGCTTATCCGAAGTCCGATTCCGATTCGGAGGTGGAATTCGACTCTGTTTTGGACTCTGATTCTGAGTCTGATAAGGCTTCTCCGACCTCCCTTGACCCTACCGAGTTCCAGCTTGCCGAGACCTACAGGGCCGTGCCGGCGCCTCTATGGCACTCTCTGCTTAAGTCTCTTTGCGCTTCTTCCTCTTCGATTGGGCTAGGTTACGCGGTTGTTTTGTGGCTTCAGAAGCATAATCTGTGCTTCTCTTACGAATTGCTTTACTCGATTCTCATTCATGCTCTTGGCCGCTCTGAGAAGCTCTATGAGGCTTTCATTCTCTCCCAGAGCCAAACCCTAACCCCATTAACGTATAATGCTCTCATTGGTGCCTGTGCTCGCAATAACGATTCGGAGAAGGCTCTCAATTTGATATCTAGGATGCGACAGGATGGTTATCAATCTGATTTTGTCAACTATAGTTTGATTATTCAGTCGCTTACTCGCACCAATAAGATTGATGTTCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAACTCGATGGGCAGCTCCTCAACGATATCATATTGGGCTTCGCGAAAGCTGGAGATCCTAACCGAGCTCTGTATTTCTTGTCCATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTTGTTGCGATTATCTCTGCTTTGGGAAATTATGGGCGGACAGAGGAAGCTGAGGCTATCTTTGAGGAAATGAAGGAAGGTGGATTGAAACCAAGGATTAAGGCCTTCAATGCTCTTCTTAAAGGCTATGCTAAAAAGGGTTCTCTGAAAGAGGCAGAATCCATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGATGAGCACACATATGGTCTTCTCGTTGATGCATATGCAAATGTGGGGAGTTGGCAAAGTGCAAGACAATTGTTGAAACAAATGGAAGCTAGAAATGTACAGCCTAATACCTTCATTTTCAGTAGGATTTTAGCTAGTTATCGTGACCGGGGCGAATGGCAGAAAACGTTTGAAGTTTTGAGGGAAATGAAGAACTGCAATGTCAAACCTGATAGGCATTTTTACAATGTCATGATTGATACGTTTGGGAAGTTCAATTGTGTTGATCATGCCATGGAAACATACGAACGGATGCTCTCCGAGGGGATCGAACCAGATGTTGTTACTTGGAACACGCTTATAGATTGTCATCGTAAGCACGGATACCATGAAAGGGCTGCAGAGTTGTTCGAAGAAATGCAGGAACGTGGTTACTTTCCTTGTCCCACAACGTATAATATTATGATCAATTCATTAGGTGAGCAGGAAAAGTGGGACGAGGTGAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGCTTACTTCCCAATGTGATAACATACACTACCCTTGTTGATATATATGGACAATCTGGAAGGTTTAATGACGCCATTGAGTGCTTGGAGGCCATGAAGTCTGCTGGACTGAAACCATCCTCAACAATGTATAATGCTTTAATCAATGCCTTTGCTCAAAAAGCAGTAAATGCATATAGAGTCATGAGATCAGATGGACTAAAACCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCATTTGGCGAGGATAGGAGAGACATTGAAGCCTTTACAATCTTGCAGTACATGAAGGAAAATGATGTGAAGCCTGACGTTGTCACATATACAACACTTATGAAAGCTTTGATTCGTGTTGAAAAGTTTGACAAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCTGATGGAAAGGCCAGAGCCATGTTGCGGTCTGCCCTCAAATACATGAAGCGTACACTAAGCTTATAGTTGGCCGCTTGATCATGTATCTATGCACTCTGTAGAACAAATTTGCAGGAGTTTATCAAACCAATACTCATAGGAATTGCCTATTCAAGCTCTGAGTCATTTCTTATGACTTGGAGAAGAGAAAGGTTTGATCTTACACTAATAGTATGGCATTATACTATCAGCAAAAAGTTGACATTTCTGAAGTAGAACTGCCAATCACCCCTTAAATGATACAGCTCCACCGTACCCGGCCGCCAGGTGCCGGTCTTAGAAACGCCAGGCAAATTCCCATCTATTGATAATTCTTGTATTATTGTTTATATAACATATTCACCATTCTTATGTCATACAGTAAAATGCAGAAGCAATAGTTGATCCAAGGACCTCAATACGTGAGTTCTTTTCTTTCTTTGAATGGTCTGCTTAATCAGTCTGTCTTTGTATCGTTTAATGATATTGGTCGATAGGTTGCAATATTGAGTAAAATGCAGAAGAAATCATTGATCCAAGGACCTCAATACGTTGATAGGTTGCAATATTGAGTAAAATGCAGAAGAAATCATTGATCCAAGGACCTCAATATGTGAGTTCTTTTCCGTTCTTTTCTTTCTTTGAATGATCTGTTAAATCAGTCTGTTTTTGTATCGTTTAAAGATAGAAACTTCGACATAGGTCGATAGAATTCAATCATCTGTGCTTGTTTAGAGTAGGTGTGGCAATAAACATATGGAGTCCAGAAACTAAACACATCTTTCTGAATGTATCTGTCAAAGGGAAATAGCAGAAACAAGTGGTCTAAACTTGTTCTTAGAAAGTCTGGAACAAAACATGAACATCAATAAGACTGACGACAACAAGAATAGCCTAAAATAAGTTCTCATTTCTTGCATCCCTAGCTCAAACACCTCCCTCTTCTTCCCATATCTGCTACTCCTCTCAATCAAGTAACCTTCAAGATAATCATCAATCGACACCAGCTTGTCTAAGTTGCCCCTTGAACGGAGCTCGGTCTTGTCAAGGTACTCTGGACCGAGCTTAAAGATTGTAAAAAACGCAGCAGA

Coding sequence (CDS)

ATGCTTCTTCTGTCACCATTGCCTCTCTCTACTCGCTTTCCTGCAACTCAATTACCTTCTCCCACCGTCTTCCTCCACCACCAGAACCCCCCTATCACTACCCACCTCTCATTTCCCATCATCTCCGCCGCCGCGGCCTCCACCACCTCCTTCTCCTCCGTCGTCACCTGTTCCACTTCATCCGACGCGCTCGAGCTCGACGTTTTCGAAAACGACCACGTTTCTTTTCAGAGTCGCCGTTACGACTTCACTCCTCTCCTCGACTTCCTTTCCCGGTCTCCGGCTTATCCGAAGTCCGATTCCGATTCGGAGGTGGAATTCGACTCTGTTTTGGACTCTGATTCTGAGTCTGATAAGGCTTCTCCGACCTCCCTTGACCCTACCGAGTTCCAGCTTGCCGAGACCTACAGGGCCGTGCCGGCGCCTCTATGGCACTCTCTGCTTAAGTCTCTTTGCGCTTCTTCCTCTTCGATTGGGCTAGGTTACGCGGTTGTTTTGTGGCTTCAGAAGCATAATCTGTGCTTCTCTTACGAATTGCTTTACTCGATTCTCATTCATGCTCTTGGCCGCTCTGAGAAGCTCTATGAGGCTTTCATTCTCTCCCAGAGCCAAACCCTAACCCCATTAACGTATAATGCTCTCATTGGTGCCTGTGCTCGCAATAACGATTCGGAGAAGGCTCTCAATTTGATATCTAGGATGCGACAGGATGGTTATCAATCTGATTTTGTCAACTATAGTTTGATTATTCAGTCGCTTACTCGCACCAATAAGATTGATGTTCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAACTCGATGGGCAGCTCCTCAACGATATCATATTGGGCTTCGCGAAAGCTGGAGATCCTAACCGAGCTCTGTATTTCTTGTCCATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTTGTTGCGATTATCTCTGCTTTGGGAAATTATGGGCGGACAGAGGAAGCTGAGGCTATCTTTGAGGAAATGAAGGAAGGTGGATTGAAACCAAGGATTAAGGCCTTCAATGCTCTTCTTAAAGGCTATGCTAAAAAGGGTTCTCTGAAAGAGGCAGAATCCATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGATGAGCACACATATGGTCTTCTCGTTGATGCATATGCAAATGTGGGGAGTTGGCAAAGTGCAAGACAATTGTTGAAACAAATGGAAGCTAGAAATGTACAGCCTAATACCTTCATTTTCAGTAGGATTTTAGCTAGTTATCGTGACCGGGGCGAATGGCAGAAAACGTTTGAAGTTTTGAGGGAAATGAAGAACTGCAATGTCAAACCTGATAGGCATTTTTACAATGTCATGATTGATACGTTTGGGAAGTTCAATTGTGTTGATCATGCCATGGAAACATACGAACGGATGCTCTCCGAGGGGATCGAACCAGATGTTGTTACTTGGAACACGCTTATAGATTGTCATCGTAAGCACGGATACCATGAAAGGGCTGCAGAGTTGTTCGAAGAAATGCAGGAACGTGGTTACTTTCCTTGTCCCACAACGTATAATATTATGATCAATTCATTAGGTGAGCAGGAAAAGTGGGACGAGGTGAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGCTTACTTCCCAATGTGATAACATACACTACCCTTGTTGATATATATGGACAATCTGGAAGGTTTAATGACGCCATTGAGTGCTTGGAGGCCATGAAGTCTGCTGGACTGAAACCATCCTCAACAATGTATAATGCTTTAATCAATGCCTTTGCTCAAAAAGCAGTAAATGCATATAGAGTCATGAGATCAGATGGACTAAAACCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCATTTGGCGAGGATAGGAGAGACATTGAAGCCTTTACAATCTTGCAGTACATGAAGGAAAATGATGTGAAGCCTGACGTTGTCACATATACAACACTTATGAAAGCTTTGATTCGTGTTGAAAAGTTTGACAAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCTGATGGAAAGGCCAGAGCCATGTTGCGGTCTGCCCTCAAATACATGAAGCGTACACTAAGCTTATAG

Protein sequence

MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQKAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL
BLAST of Cp4.1LG11g07920 vs. Swiss-Prot
Match: PP413_ARATH (Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1)

HSP 1 Score: 959.1 bits (2478), Expect = 2.6e-278
Identity = 501/720 (69.58%), Postives = 587/720 (81.53%), Query Frame = 1

Query: 1   MLLLSPLPL-STRFPATQLPSPTVFLHHQ--NPPITTHLSFPIISAAAASTTSFSSVVTC 60
           MLLL   PL STRF +    +     HH+   PPI+   +    S  + S +S SS  + 
Sbjct: 1   MLLLQQPPLVSTRFHSLYFLTHHHHHHHRFFQPPISAFSATTSASLPSPSPSSSSSYFSS 60

Query: 61  STSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSES 120
               D  E +  +N+  S   RRYDF+PLL FLSR            VE    LDS+SES
Sbjct: 61  WNGLDTNEEE--DNEFSSEVHRRYDFSPLLKFLSRF---------GPVEL--ALDSESES 120

Query: 121 DKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSY 180
           + ASP SL+P EF L E+YRAVPAP WHSL+KSL +S+SS+GL YAVV WLQKHNLCFSY
Sbjct: 121 E-ASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 240
           ELLYSILIHALGRSEKLYEAF+LSQ QTLTPLTYNALIGACARNND EKALNLI++MRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           GYQSDFVNYSL+IQSLTR+NKID  +L +LY+EIE DK+ELD QL+NDII+GFAK+GDP+
Sbjct: 241 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           +AL  L M QA+GL+ KT+T V+IISAL + GRT EAEA+FEE+++ G+KPR +A+NALL
Sbjct: 301 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 360

Query: 361 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 420
           KGY K G LK+AES+VSEMEK G+SPDEHTY LL+DAY N G W+SAR +LK+MEA +VQ
Sbjct: 361 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 420

Query: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 480
           PN+F+FSR+LA +RDRGEWQKTF+VL+EMK+  VKPDR FYNV+IDTFGKFNC+DHAM T
Sbjct: 421 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 480

Query: 481 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 540
           ++RMLSEGIEPD VTWNTLIDCH KHG H  A E+FE M+ RG  PC TTYNIMINS G+
Sbjct: 481 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QE+WD++K LLGKM+SQG+LPNV+T+TTLVD+YG+SGRFNDAIECLE MKS GLKPSSTM
Sbjct: 541 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 600

Query: 601 YNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 660
           YNALINA+AQ+     AVNA+RVM SDGLKPSLLALNSLINAFGEDRRD EAF +LQYMK
Sbjct: 601 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 660

Query: 661 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTL 713
           EN VKPDVVTYTTLMKALIRV+KF KVP VYEEMI+SGC PD KAR+MLRSAL+YMK+TL
Sbjct: 661 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTL 706

BLAST of Cp4.1LG11g07920 vs. Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.3e-55
Identity = 152/569 (26.71%), Postives = 256/569 (44.99%), Query Frame = 1

Query: 139 VPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELLYSILIHALGRSEKLYEAF 198
           V A  +  LLK LCA   +      +VL       C      Y+IL+  L    +  EA 
Sbjct: 120 VDAIAFTPLLKGLCADKRTSD-AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEAL 179

Query: 199 ILSQSQT--------LTPLTYNALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLII 258
            L                ++Y  +I    +  DS+KA +    M   G   D V Y+ II
Sbjct: 180 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSII 239

Query: 259 QSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASG 318
            +L +   +D  +  ++   +  + +  D    N I+ G+  +G P  A+ FL  +++ G
Sbjct: 240 AALCKAQAMDKAM--EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 299

Query: 319 LNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKGSLKEAE 378
           + P   T+  ++  L   GR  EA  IF+ M + GLKP I  +  LL+GYA KG+L E  
Sbjct: 300 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 359

Query: 379 SIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASY 438
            ++  M ++G+ PD + + +L+ AYA  G    A  +  +M  + + PN   +  ++   
Sbjct: 360 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 419

Query: 439 RDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDV 498
              G  +       +M +  + P    YN +I      N  + A E    ML  GI  + 
Sbjct: 420 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 479

Query: 499 VTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGK 558
           + +N++ID H K G    + +LFE M   G  P   TYN +IN      K DE   LL  
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 539

Query: 559 MQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQ--- 618
           M S GL PN +TY+TL++ Y +  R  DA+   + M+S+G+ P    YN ++    Q   
Sbjct: 540 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 599

Query: 619 --KAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKENDVKPDVVTYTT 678
              A   Y  +   G +  L   N +++   +++   +A  + Q +   D+K +  T+  
Sbjct: 600 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 659

Query: 679 LMKALIRVEKFDKVPAVYEEMILSGCTPD 695
           ++ AL++V + D+   ++     +G  P+
Sbjct: 660 MIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

BLAST of Cp4.1LG11g07920 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 9.7e-55
Identity = 133/527 (25.24%), Postives = 244/527 (46.30%), Query Frame = 1

Query: 182 SILIHALGRSEKLYEAF-----ILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQ 241
           +I+I  LG+  ++  A      +     +L   +Y +LI A A +    +A+N+  +M +
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236

Query: 242 DGYQSDFVNYSLIIQSL----TRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAK 301
           DG +   + Y++I+       T  NKI       L E+++SD I  D    N +I    +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKIT-----SLVEKMKSDGIAPDAYTYNTLITCCKR 296

Query: 302 AGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKA 361
                 A      ++A+G +    T+ A++   G   R +EA  +  EM   G  P I  
Sbjct: 297 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 356

Query: 362 FNALLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQME 421
           +N+L+  YA+ G L EA  + ++M + G  PD  TY  L+  +   G  +SA  + ++M 
Sbjct: 357 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 416

Query: 422 ARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVD 481
               +PN   F+  +  Y +RG++ +  ++  E+  C + PD   +N ++  FG+     
Sbjct: 417 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 476

Query: 482 HAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMI 541
                ++ M   G  P+  T+NTLI  + + G  E+A  ++  M + G  P  +TYN ++
Sbjct: 477 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 536

Query: 542 NSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLK 601
            +L     W++ + +L +M+     PN +TY +L+  Y             E + S  ++
Sbjct: 537 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 596

Query: 602 PSSTMYNALINAFAQ-----KAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTI 661
           P + +   L+   ++     +A  A+  ++  G  P +  LNS+++ +G  +   +A  +
Sbjct: 597 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 656

Query: 662 LQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPD 695
           L YMKE    P + TY +LM    R   F K   +  E++  G  PD
Sbjct: 657 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698

BLAST of Cp4.1LG11g07920 vs. Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.9e-53
Identity = 140/509 (27.50%), Postives = 242/509 (47.54%), Query Frame = 1

Query: 194 LYEAFILSQSQTL-TPLTYNALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQS 253
           L+E+ I  QS+ L TP+ +N L  A AR    +  L     M  +G + D    +++I  
Sbjct: 57  LFESMI--QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 116

Query: 254 LTRTNKI--DVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASG 313
             R  K+     +L + ++       E D    + ++ GF   G  + A+  +  +    
Sbjct: 117 YCRKKKLLFAFSVLGRAWKL----GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 176

Query: 314 LNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKGSLKEAE 373
             P   T   +I+ L   GR  EA  + + M E G +P    +  +L    K G+   A 
Sbjct: 177 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 236

Query: 374 SIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASY 433
            +  +ME+  +      Y +++D+    GS+  A  L  +ME + ++ +   +S ++   
Sbjct: 237 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 296

Query: 434 RDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDV 493
            + G+W    ++LREM   N+ PD   ++ +ID F K   +  A E Y  M++ GI PD 
Sbjct: 297 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 356

Query: 494 VTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGK 553
           +T+N+LID   K      A ++F+ M  +G  P   TY+I+INS  + ++ D+   L  +
Sbjct: 357 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 416

Query: 554 MQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALI-----NAF 613
           + S+GL+PN ITY TLV  + QSG+ N A E  + M S G+ PS   Y  L+     N  
Sbjct: 417 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 476

Query: 614 AQKAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKENDVKPDVVTYTT 673
             KA+  +  M+   +   +   N +I+      +  +A+++   + +  VKPDVVTY  
Sbjct: 477 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 536

Query: 674 LMKALIRVEKFDKVPAVYEEMILSGCTPD 695
           ++  L +     +   ++ +M   GCTPD
Sbjct: 537 MIGGLCKKGSLSEADMLFRKMKEDGCTPD 559

BLAST of Cp4.1LG11g07920 vs. Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.2e-52
Identity = 131/431 (30.39%), Postives = 215/431 (49.88%), Query Frame = 1

Query: 212 NALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEI 271
           +AL  A   + D E   +L+         SD   Y  II+ L   N+ D  +    +   
Sbjct: 167 DALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVK 226

Query: 272 ESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRT 331
              +    G+L + +I    + G    A        A G       F A+ISA G  G  
Sbjct: 227 RERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 286

Query: 332 EEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKG-SLKEAESIVSEMEKSGLSPDEHTYGL 391
           EEA ++F  MKE GL+P +  +NA++    K G   K+      EM+++G+ PD  T+  
Sbjct: 287 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 346

Query: 392 LVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCN 451
           L+   +  G W++AR L  +M  R ++ + F ++ +L +    G+    FE+L +M    
Sbjct: 347 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 406

Query: 452 VKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAA 511
           + P+   Y+ +ID F K    D A+  +  M   GI  D V++NTL+  + K G  E A 
Sbjct: 407 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 466

Query: 512 ELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIY 571
           ++  EM   G      TYN ++   G+Q K+DEVK +  +M+ + +LPN++TY+TL+D Y
Sbjct: 467 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 526

Query: 572 GQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQ-----KAVNAYRVMRSDGLKPSL 631
            + G + +A+E     KSAGL+    +Y+ALI+A  +      AV+    M  +G+ P++
Sbjct: 527 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 586

Query: 632 LALNSLINAFG 637
           +  NS+I+AFG
Sbjct: 587 VTYNSIIDAFG 595

BLAST of Cp4.1LG11g07920 vs. TrEMBL
Match: A0A0A0KCZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358090 PE=4 SV=1)

HSP 1 Score: 1269.2 bits (3283), Expect = 0.0e+00
Identity = 652/723 (90.18%), Postives = 679/723 (93.91%), Query Frame = 1

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPP--ITTHLSFPIISAAAASTTSFSSVVTCS 60
           MLLLSPLPLSTRFPAT L SP VFLHH + P   TTHLSF   SA A   TS SS+VTC 
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPPVFLHHHHNPHIATTHLSFSFFSAPA---TSSSSLVTCY 60

Query: 61  TSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPK--SDSDSEVEFDSVLDSDSE 120
           TSSD LE DVFEND VS QSRRYDFTPLLDFLSRS AYPK  SDSDSEVEFDS  +S S+
Sbjct: 61  TSSDNLEFDVFENDPVSLQSRRYDFTPLLDFLSRSSAYPKFDSDSDSEVEFDSTFNSGSD 120

Query: 121 SDKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFS 180
           SD ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQ+HNLCFS
Sbjct: 121 SDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFS 180

Query: 181 YELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQ 240
           YELLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQ
Sbjct: 181 YELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQ 240

Query: 241 DGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDP 300
           DG+QSDF+NYSLIIQSLTRTNKID+P+LQKLYEEIESDKIELDG LLNDIILGFAKAGDP
Sbjct: 241 DGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDP 300

Query: 301 NRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360
           NRALYFLSMVQASGLNPKTSTFVA+ISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNAL
Sbjct: 301 NRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360

Query: 361 LKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNV 420
           LKGYA+KGSLKEAESI+SEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNV
Sbjct: 361 LKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV 420

Query: 421 QPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAME 480
           QPNTFIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAME
Sbjct: 421 QPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME 480

Query: 481 TYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLG 540
           TY+RMLSEGIEPDVVTWNTLIDCHRKHGYH+RAAELFEEMQERGY PCPTTYNIMINSLG
Sbjct: 481 TYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG 540

Query: 541 EQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSST 600
           EQEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+T
Sbjct: 541 EQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSAT 600

Query: 601 MYNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYM 660
           MYNALINAFAQ+     AVNAYRVM SDGL+PSLLALNSLINAFGEDRRDIEAF+ILQYM
Sbjct: 601 MYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYM 660

Query: 661 KENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRT 715
           KENDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRT
Sbjct: 661 KENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRT 720

BLAST of Cp4.1LG11g07920 vs. TrEMBL
Match: A0A0B0P655_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28108 PE=4 SV=1)

HSP 1 Score: 1001.1 bits (2587), Expect = 6.7e-289
Identity = 516/722 (71.47%), Postives = 600/722 (83.10%), Query Frame = 1

Query: 2   LLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTSS 61
           +LL P PL  RFP+ QL SP + LH  +   T+  +     AAAA+ TS +         
Sbjct: 1   MLLLPPPLPVRFPSIQLSSPIIRLHFSHH--TSLCTSAAAEAAAAAETSITLSFDKERDR 60

Query: 62  DAL-ELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 121
           D   + +  END +S   RRYDFTPLL++LSRS +                 SDS+SD A
Sbjct: 61  DRYGDENDDENDVLSLHKRRYDFTPLLNYLSRSNSA----------------SDSDSDSA 120

Query: 122 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSS-----IGLGYAVVLWLQKHNLCF 181
           SPTSLDP EFQLAE+YRAVPAPLWHSLLKSLCASSSS     I L YAVV WLQ+HNLCF
Sbjct: 121 SPTSLDPIEFQLAESYRAVPAPLWHSLLKSLCASSSSSSSSSINLAYAVVSWLQRHNLCF 180

Query: 182 SYELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMR 241
           SYELLYSILIHALGRSEKLYEAF+LSQ Q+LTPLTYNALI ACARN+D EKALNL+SRMR
Sbjct: 181 SYELLYSILIHALGRSEKLYEAFLLSQRQSLTPLTYNALINACARNDDLEKALNLMSRMR 240

Query: 242 QDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGD 301
           QDGYQSDFVNYSLIIQSLTR NKID  +LQKLY EIE D+IE+DGQLLNDII+GFAKA D
Sbjct: 241 QDGYQSDFVNYSLIIQSLTRNNKIDSSLLQKLYGEIECDRIEVDGQLLNDIIVGFAKAND 300

Query: 302 PNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNA 361
           P+RAL FL+M QA GL+PKT+T VA+I +LG  GR  EAEA+FEEMK  GLKPR +A+NA
Sbjct: 301 PSRALKFLAMAQAIGLSPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGSGLKPRTRAYNA 360

Query: 362 LLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARN 421
           LLKGY K GSLK+AE +VSEME+SG+SPDEHTY LL+DAY+N G W+SAR +LK+MEA N
Sbjct: 361 LLKGYVKSGSLKDAELVVSEMERSGVSPDEHTYSLLIDAYSNAGRWESARIVLKEMEANN 420

Query: 422 VQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAM 481
           V+PN+F++SRILASYR++GEWQ++F+VL+EMK+  ++PDRHFYNVMIDTFGK+NC+DHAM
Sbjct: 421 VKPNSFVYSRILASYRNKGEWQRSFQVLKEMKSNGIQPDRHFYNVMIDTFGKYNCLDHAM 480

Query: 482 ETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSL 541
            T++RMLSEGIEPD VTWNTLIDCH K G+H+RA +LFEEM+E+GY PC TTYNIMINSL
Sbjct: 481 ATFDRMLSEGIEPDTVTWNTLIDCHCKAGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSL 540

Query: 542 GEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSS 601
           GEQE+WD+VK LLGKMQ +GLLPN++TYTTLVDIYG+SGRF+DAIECLE MKSAGLKPSS
Sbjct: 541 GEQERWDDVKSLLGKMQGEGLLPNIVTYTTLVDIYGKSGRFSDAIECLELMKSAGLKPSS 600

Query: 602 TMYNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQY 661
           TMYNALINA+AQ+     A+NA RVM +DGLKP+LLALNSLINAFGEDRRD+EAF +LQY
Sbjct: 601 TMYNALINAYAQRGLSEQAMNALRVMGADGLKPNLLALNSLINAFGEDRRDVEAFAVLQY 660

Query: 662 MKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKR 713
           MKEN +KPDVVTYTTLMKALIRV+KF KVPAVYEEMILSGCTPD KARAMLRSAL+YMK+
Sbjct: 661 MKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQ 704

BLAST of Cp4.1LG11g07920 vs. TrEMBL
Match: W9R4R5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024883 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 8.8e-289
Identity = 517/722 (71.61%), Postives = 602/722 (83.38%), Query Frame = 1

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFL---HHQNPPITTHLSFPIISAAAAS-TTSFSSVVT 60
           M LL P P S +FP+ Q  + T F    HHQ+    T     + SAAA++ +TS S    
Sbjct: 1   MQLLLPPPASAKFPSIQ--TTTTFHTRHHHQHHYHYTSSQLLLFSAAASAVSTSGSGEAP 60

Query: 61  CSTSSDALELDVF-ENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDS 120
            S+SS ++      END VS ++RRYDF PLL+FLS                 + + + +
Sbjct: 61  LSSSSSSMRRRFDDENDLVSLRNRRYDFNPLLNFLSNR---------------TNISAAT 120

Query: 121 ESDKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCF 180
           ES    PTSLD  EF+LAE+YRAVPA LWHSLLKSLC+ SSSIGL YAVV WLQKHNLCF
Sbjct: 121 ESGSDPPTSLDREEFELAESYRAVPALLWHSLLKSLCSKSSSIGLAYAVVSWLQKHNLCF 180

Query: 181 SYELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMR 240
           SYELLYSILIHALGRSEKLYEAF+LSQ QTLTPLTYNALIGACARN+D EKALNL++RMR
Sbjct: 181 SYELLYSILIHALGRSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMARMR 240

Query: 241 QDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGD 300
           QDG+ SDFVNYSLIIQSLTR NKID PILQKLY+EIE DKIELDGQLLNDII+GFAKAGD
Sbjct: 241 QDGFPSDFVNYSLIIQSLTRKNKIDSPILQKLYKEIECDKIELDGQLLNDIIVGFAKAGD 300

Query: 301 PNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNA 360
           P++A++FL++VQA GL+PKT+T  A+ISALGN GR  EAEA+FEE+K+GGL+PR +A+NA
Sbjct: 301 PSQAMHFLAVVQAMGLSPKTATLTAVISALGNSGRIVEAEALFEEIKDGGLQPRTRAYNA 360

Query: 361 LLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARN 420
           LLKGY K  SLK+AES+VSEME +G+SPDEHTY LL+DAYAN G W+SAR +LK+MEA N
Sbjct: 361 LLKGYVKASSLKDAESVVSEMEMNGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEASN 420

Query: 421 VQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAM 480
           VQPN+++FSRILASYRDRGEWQKTF+VLREMK+  V+PDRHFYNVMIDTFGKFNC+DHAM
Sbjct: 421 VQPNSYVFSRILASYRDRGEWQKTFQVLREMKSSGVRPDRHFYNVMIDTFGKFNCLDHAM 480

Query: 481 ETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSL 540
            T+ERM+ +GI+PD VTWNTLI+CH K G HERA ELFEEMQERGY PC TTYNI+INS 
Sbjct: 481 ATFERMILDGIQPDTVTWNTLINCHCKAGRHERAEELFEEMQERGYPPCATTYNILINSF 540

Query: 541 GEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSS 600
           GEQE+WD+VK+LLGKMQSQGLLPNV+TYTTL+DIYGQSGRFNDA++CL+ MK++GLKPSS
Sbjct: 541 GEQERWDDVKVLLGKMQSQGLLPNVVTYTTLIDIYGQSGRFNDAMDCLQDMKTSGLKPSS 600

Query: 601 TMYNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQY 660
           TMYNALINA+AQ+     A+NA+R+MR DGLKPS+LALNSLINAFGEDRRD EAF +LQY
Sbjct: 601 TMYNALINAYAQRGLSEQALNAFRLMRGDGLKPSILALNSLINAFGEDRRDAEAFAVLQY 660

Query: 661 MKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKR 713
           MKEN +KPDVVTYTTLMKAL RV+KFDKVP VYEEMI SGCTPD KAR MLRSAL+YMK+
Sbjct: 661 MKENGLKPDVVTYTTLMKALNRVDKFDKVPVVYEEMISSGCTPDRKAREMLRSALRYMKQ 705

BLAST of Cp4.1LG11g07920 vs. TrEMBL
Match: A0A061FD59_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034374 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 8.8e-289
Identity = 517/720 (71.81%), Postives = 593/720 (82.36%), Query Frame = 1

Query: 2   LLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTSS 61
           +LL P PL  RFP+ QL SP   LH     ++   S    +AA A+  S S  +      
Sbjct: 1   MLLLPPPLPARFPSIQLSSPITRLH-----VSLQTSIYTAAAATAAEASISLSIDKDKDR 60

Query: 62  DALE-LDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 121
           D  +  D  ++D +S   RRYDFTPLL++LS S + P SDSDS                A
Sbjct: 61  DRYDDEDDDQSDVLSIHKRRYDFTPLLNYLSSSNSEPDSDSDS----------------A 120

Query: 122 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSS-----IGLGYAVVLWLQKHNLCF 181
           SPTSLDP EFQLAE+YRAVPAPLWHSLLKS+C+SSSS     I L YAVV WLQ+HNLCF
Sbjct: 121 SPTSLDPIEFQLAESYRAVPAPLWHSLLKSMCSSSSSSSSSSINLAYAVVSWLQRHNLCF 180

Query: 182 SYELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMR 241
           SYELLYSILIHALGRSEKLYEAF+LSQ QTLTPLTYNALI ACARNND EKALNL+SRMR
Sbjct: 181 SYELLYSILIHALGRSEKLYEAFLLSQRQTLTPLTYNALINACARNNDLEKALNLMSRMR 240

Query: 242 QDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGD 301
           QDGYQSDFVNYSLIIQSLTR+NKID  +LQKLY EIE DKIE+DGQLLNDII+GFAKA D
Sbjct: 241 QDGYQSDFVNYSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKAND 300

Query: 302 PNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNA 361
           P+ AL FL+M QA GLNPKT+T VA+I +LG  GR  EAEA+FEEMK  GLKPR +A+NA
Sbjct: 301 PSHALKFLAMAQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNA 360

Query: 362 LLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARN 421
           LLKGY K GSLK+AE +VSEME+SG+SPDEHTY LL+DAYAN G W+SAR +LK+MEA N
Sbjct: 361 LLKGYVKAGSLKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANN 420

Query: 422 VQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAM 481
           VQPN+F++SRILASYR++GEWQ++F+VLREMK+  ++PDRHFYNVMIDTFGK+NC+DHAM
Sbjct: 421 VQPNSFVYSRILASYRNKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAM 480

Query: 482 ETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSL 541
           +T++RMLSEGI+PD VTWNTLIDCH K G H RA ELFEEM+E GY PC TTYNIMINS 
Sbjct: 481 DTFDRMLSEGIKPDTVTWNTLIDCHCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSF 540

Query: 542 GEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSS 601
           G QE+WD VK LLGKMQSQGLLPN++TYTTLVDIYG+SGRF+DA+ECLE MKSAGLKPS 
Sbjct: 541 GGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFSDAMECLELMKSAGLKPSL 600

Query: 602 TMYNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQY 661
           TMYNALINA+AQ+     A+NA R+MR+DGLKP+LLALNSLINAFGEDRRD+EAF +LQY
Sbjct: 601 TMYNALINAYAQRGLSEQAINALRIMRADGLKPNLLALNSLINAFGEDRRDVEAFAVLQY 660

Query: 662 MKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKR 711
           MKENDVKPDVVTYTTLMK+LIRV+KF KVPAVYEEMILSGCTPD KARAMLRSAL+YMK+
Sbjct: 661 MKENDVKPDVVTYTTLMKSLIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQ 699

BLAST of Cp4.1LG11g07920 vs. TrEMBL
Match: A0A061FDX5_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_034374 PE=4 SV=1)

HSP 1 Score: 997.7 bits (2578), Expect = 7.4e-288
Identity = 514/714 (71.99%), Postives = 589/714 (82.49%), Query Frame = 1

Query: 8   PLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTSSDALE-L 67
           PL  RFP+ QL SP   LH     ++   S    +AA A+  S S  +      D  +  
Sbjct: 2   PLPARFPSIQLSSPITRLH-----VSLQTSIYTAAAATAAEASISLSIDKDKDRDRYDDE 61

Query: 68  DVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKASPTSLD 127
           D  ++D +S   RRYDFTPLL++LS S + P SDSDS                ASPTSLD
Sbjct: 62  DDDQSDVLSIHKRRYDFTPLLNYLSSSNSEPDSDSDS----------------ASPTSLD 121

Query: 128 PTEFQLAETYRAVPAPLWHSLLKSLCASSSS-----IGLGYAVVLWLQKHNLCFSYELLY 187
           P EFQLAE+YRAVPAPLWHSLLKS+C+SSSS     I L YAVV WLQ+HNLCFSYELLY
Sbjct: 122 PIEFQLAESYRAVPAPLWHSLLKSMCSSSSSSSSSSINLAYAVVSWLQRHNLCFSYELLY 181

Query: 188 SILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQS 247
           SILIHALGRSEKLYEAF+LSQ QTLTPLTYNALI ACARNND EKALNL+SRMRQDGYQS
Sbjct: 182 SILIHALGRSEKLYEAFLLSQRQTLTPLTYNALINACARNNDLEKALNLMSRMRQDGYQS 241

Query: 248 DFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALY 307
           DFVNYSLIIQSLTR+NKID  +LQKLY EIE DKIE+DGQLLNDII+GFAKA DP+ AL 
Sbjct: 242 DFVNYSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKANDPSHALK 301

Query: 308 FLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYA 367
           FL+M QA GLNPKT+T VA+I +LG  GR  EAEA+FEEMK  GLKPR +A+NALLKGY 
Sbjct: 302 FLAMAQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYV 361

Query: 368 KKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNTF 427
           K GSLK+AE +VSEME+SG+SPDEHTY LL+DAYAN G W+SAR +LK+MEA NVQPN+F
Sbjct: 362 KAGSLKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSF 421

Query: 428 IFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYERM 487
           ++SRILASYR++GEWQ++F+VLREMK+  ++PDRHFYNVMIDTFGK+NC+DHAM+T++RM
Sbjct: 422 VYSRILASYRNKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRM 481

Query: 488 LSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEKW 547
           LSEGI+PD VTWNTLIDCH K G H RA ELFEEM+E GY PC TTYNIMINS G QE+W
Sbjct: 482 LSEGIKPDTVTWNTLIDCHCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERW 541

Query: 548 DEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNAL 607
           D VK LLGKMQSQGLLPN++TYTTLVDIYG+SGRF+DA+ECLE MKSAGLKPS TMYNAL
Sbjct: 542 DNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNAL 601

Query: 608 INAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKENDV 667
           INA+AQ+     A+NA R+MR+DGLKP+LLALNSLINAFGEDRRD+EAF +LQYMKENDV
Sbjct: 602 INAYAQRGLSEQAINALRIMRADGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENDV 661

Query: 668 KPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKR 711
           KPDVVTYTTLMK+LIRV+KF KVPAVYEEMILSGCTPD KARAMLRSAL+YMK+
Sbjct: 662 KPDVVTYTTLMKSLIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQ 694

BLAST of Cp4.1LG11g07920 vs. TAIR10
Match: AT5G42310.1 (AT5G42310.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 959.1 bits (2478), Expect = 1.5e-279
Identity = 501/720 (69.58%), Postives = 587/720 (81.53%), Query Frame = 1

Query: 1   MLLLSPLPL-STRFPATQLPSPTVFLHHQ--NPPITTHLSFPIISAAAASTTSFSSVVTC 60
           MLLL   PL STRF +    +     HH+   PPI+   +    S  + S +S SS  + 
Sbjct: 1   MLLLQQPPLVSTRFHSLYFLTHHHHHHHRFFQPPISAFSATTSASLPSPSPSSSSSYFSS 60

Query: 61  STSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSES 120
               D  E +  +N+  S   RRYDF+PLL FLSR            VE    LDS+SES
Sbjct: 61  WNGLDTNEEE--DNEFSSEVHRRYDFSPLLKFLSRF---------GPVEL--ALDSESES 120

Query: 121 DKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSY 180
           + ASP SL+P EF L E+YRAVPAP WHSL+KSL +S+SS+GL YAVV WLQKHNLCFSY
Sbjct: 121 E-ASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 240
           ELLYSILIHALGRSEKLYEAF+LSQ QTLTPLTYNALIGACARNND EKALNLI++MRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           GYQSDFVNYSL+IQSLTR+NKID  +L +LY+EIE DK+ELD QL+NDII+GFAK+GDP+
Sbjct: 241 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           +AL  L M QA+GL+ KT+T V+IISAL + GRT EAEA+FEE+++ G+KPR +A+NALL
Sbjct: 301 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 360

Query: 361 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 420
           KGY K G LK+AES+VSEMEK G+SPDEHTY LL+DAY N G W+SAR +LK+MEA +VQ
Sbjct: 361 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 420

Query: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 480
           PN+F+FSR+LA +RDRGEWQKTF+VL+EMK+  VKPDR FYNV+IDTFGKFNC+DHAM T
Sbjct: 421 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 480

Query: 481 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 540
           ++RMLSEGIEPD VTWNTLIDCH KHG H  A E+FE M+ RG  PC TTYNIMINS G+
Sbjct: 481 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QE+WD++K LLGKM+SQG+LPNV+T+TTLVD+YG+SGRFNDAIECLE MKS GLKPSSTM
Sbjct: 541 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 600

Query: 601 YNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 660
           YNALINA+AQ+     AVNA+RVM SDGLKPSLLALNSLINAFGEDRRD EAF +LQYMK
Sbjct: 601 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 660

Query: 661 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTL 713
           EN VKPDVVTYTTLMKALIRV+KF KVP VYEEMI+SGC PD KAR+MLRSAL+YMK+TL
Sbjct: 661 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTL 706

BLAST of Cp4.1LG11g07920 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 216.5 bits (550), Expect = 5.4e-56
Identity = 133/527 (25.24%), Postives = 244/527 (46.30%), Query Frame = 1

Query: 182 SILIHALGRSEKLYEAF-----ILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQ 241
           +I+I  LG+  ++  A      +     +L   +Y +LI A A +    +A+N+  +M +
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236

Query: 242 DGYQSDFVNYSLIIQSL----TRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAK 301
           DG +   + Y++I+       T  NKI       L E+++SD I  D    N +I    +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKIT-----SLVEKMKSDGIAPDAYTYNTLITCCKR 296

Query: 302 AGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKA 361
                 A      ++A+G +    T+ A++   G   R +EA  +  EM   G  P I  
Sbjct: 297 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 356

Query: 362 FNALLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQME 421
           +N+L+  YA+ G L EA  + ++M + G  PD  TY  L+  +   G  +SA  + ++M 
Sbjct: 357 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 416

Query: 422 ARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVD 481
               +PN   F+  +  Y +RG++ +  ++  E+  C + PD   +N ++  FG+     
Sbjct: 417 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 476

Query: 482 HAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMI 541
                ++ M   G  P+  T+NTLI  + + G  E+A  ++  M + G  P  +TYN ++
Sbjct: 477 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 536

Query: 542 NSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLK 601
            +L     W++ + +L +M+     PN +TY +L+  Y             E + S  ++
Sbjct: 537 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 596

Query: 602 PSSTMYNALINAFAQ-----KAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTI 661
           P + +   L+   ++     +A  A+  ++  G  P +  LNS+++ +G  +   +A  +
Sbjct: 597 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 656

Query: 662 LQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPD 695
           L YMKE    P + TY +LM    R   F K   +  E++  G  PD
Sbjct: 657 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698

BLAST of Cp4.1LG11g07920 vs. TAIR10
Match: AT3G22470.1 (AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 210.3 bits (534), Expect = 3.9e-54
Identity = 140/509 (27.50%), Postives = 242/509 (47.54%), Query Frame = 1

Query: 194 LYEAFILSQSQTL-TPLTYNALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQS 253
           L+E+ I  QS+ L TP+ +N L  A AR    +  L     M  +G + D    +++I  
Sbjct: 57  LFESMI--QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 116

Query: 254 LTRTNKI--DVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASG 313
             R  K+     +L + ++       E D    + ++ GF   G  + A+  +  +    
Sbjct: 117 YCRKKKLLFAFSVLGRAWKL----GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 176

Query: 314 LNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKGSLKEAE 373
             P   T   +I+ L   GR  EA  + + M E G +P    +  +L    K G+   A 
Sbjct: 177 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 236

Query: 374 SIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASY 433
            +  +ME+  +      Y +++D+    GS+  A  L  +ME + ++ +   +S ++   
Sbjct: 237 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 296

Query: 434 RDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDV 493
            + G+W    ++LREM   N+ PD   ++ +ID F K   +  A E Y  M++ GI PD 
Sbjct: 297 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 356

Query: 494 VTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGK 553
           +T+N+LID   K      A ++F+ M  +G  P   TY+I+INS  + ++ D+   L  +
Sbjct: 357 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 416

Query: 554 MQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALI-----NAF 613
           + S+GL+PN ITY TLV  + QSG+ N A E  + M S G+ PS   Y  L+     N  
Sbjct: 417 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 476

Query: 614 AQKAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKENDVKPDVVTYTT 673
             KA+  +  M+   +   +   N +I+      +  +A+++   + +  VKPDVVTY  
Sbjct: 477 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 536

Query: 674 LMKALIRVEKFDKVPAVYEEMILSGCTPD 695
           ++  L +     +   ++ +M   GCTPD
Sbjct: 537 MIGGLCKKGSLSEADMLFRKMKEDGCTPD 559

BLAST of Cp4.1LG11g07920 vs. TAIR10
Match: AT2G31400.1 (AT2G31400.1 genomes uncoupled 1)

HSP 1 Score: 209.5 bits (532), Expect = 6.7e-54
Identity = 131/431 (30.39%), Postives = 215/431 (49.88%), Query Frame = 1

Query: 212 NALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEI 271
           +AL  A   + D E   +L+         SD   Y  II+ L   N+ D  +    +   
Sbjct: 167 DALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVK 226

Query: 272 ESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRT 331
              +    G+L + +I    + G    A        A G       F A+ISA G  G  
Sbjct: 227 RERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 286

Query: 332 EEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKG-SLKEAESIVSEMEKSGLSPDEHTYGL 391
           EEA ++F  MKE GL+P +  +NA++    K G   K+      EM+++G+ PD  T+  
Sbjct: 287 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 346

Query: 392 LVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCN 451
           L+   +  G W++AR L  +M  R ++ + F ++ +L +    G+    FE+L +M    
Sbjct: 347 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 406

Query: 452 VKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAA 511
           + P+   Y+ +ID F K    D A+  +  M   GI  D V++NTL+  + K G  E A 
Sbjct: 407 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 466

Query: 512 ELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIY 571
           ++  EM   G      TYN ++   G+Q K+DEVK +  +M+ + +LPN++TY+TL+D Y
Sbjct: 467 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 526

Query: 572 GQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQ-----KAVNAYRVMRSDGLKPSL 631
            + G + +A+E     KSAGL+    +Y+ALI+A  +      AV+    M  +G+ P++
Sbjct: 527 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 586

Query: 632 LALNSLINAFG 637
           +  NS+I+AFG
Sbjct: 587 VTYNSIIDAFG 595

BLAST of Cp4.1LG11g07920 vs. TAIR10
Match: AT2G18940.1 (AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-53
Identity = 136/522 (26.05%), Postives = 245/522 (46.93%), Query Frame = 1

Query: 183 ILIHALGRSEKLYEAFILS-----QSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 242
           I +  LGR  +   A  L      Q   L    Y  ++ A +R    EKA++L  RM++ 
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239

Query: 243 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 302
           G     V Y++I+    +  +    IL  L +E+ S  ++ D    + ++   A+ G   
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVL-DEMRSKGLKFDEFTCSTVLSACAREGLLR 299

Query: 303 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 362
            A  F + +++ G  P T T+ A++   G  G   EA ++ +EM+E         +N L+
Sbjct: 300 EAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 359

Query: 363 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 422
             Y + G  KEA  ++  M K G+ P+  TY  ++DAY   G    A +L   M+     
Sbjct: 360 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 419

Query: 423 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 482
           PNT  ++ +L+    +    +  ++L +MK+    P+R  +N M+   G           
Sbjct: 420 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRV 479

Query: 483 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 542
           +  M S G EPD  T+NTLI  + + G    A++++ EM   G+  C TTYN ++N+L  
Sbjct: 480 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 539

Query: 543 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 602
           +  W   + ++  M+S+G  P   +Y+ ++  Y + G +         +K   + PS  +
Sbjct: 540 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 599

Query: 603 YNALINA-FAQKAV----NAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 662
              L+ A F  +A+     A+ + +  G KP ++  NS+++ F  +    +A  IL+ ++
Sbjct: 600 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 659

Query: 663 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPD 695
           E+ + PD+VTY +LM   +R  +  K   + + +  S   PD
Sbjct: 660 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700

BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: gi|659129812|ref|XP_008464858.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Cucumis melo])

HSP 1 Score: 1278.8 bits (3308), Expect = 0.0e+00
Identity = 659/722 (91.27%), Postives = 684/722 (94.74%), Query Frame = 1

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITT-HLSFPIISAAAASTTSFSSVVTCST 60
           MLLLSPLPLSTRFPAT L SP VFLHH NP ITT HLSF  ISAAAA+T+S  SVVTC T
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHHNPHITTTHLSFSFISAAAAATSS--SVVTCYT 60

Query: 61  SSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDS--DSEVEFDSVLDSDSES 120
           SSD LE DVFE+D VS QSRRYDFTPLLDFLSRS AYPKSDS  DSEVEFD  L+S S+S
Sbjct: 61  SSDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDS 120

Query: 121 DKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSY 180
           D ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSY
Sbjct: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 240
           ELLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           G+QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPN
Sbjct: 241 GFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPN 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           RALYFLSMVQASGLNPKTSTFVA+ISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALL
Sbjct: 301 RALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360

Query: 361 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 420
           KGYA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQ
Sbjct: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420

Query: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 480
           PNTFIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMET
Sbjct: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480

Query: 481 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 540
           Y+RMLSEGIEPDVVTWNTLIDCHRKHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGE
Sbjct: 481 YDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TM
Sbjct: 541 QEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATM 600

Query: 601 YNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 660
           YNALINAFAQ+     AVNAYRVM SDGL+PSLLALNSLINAFGEDRRD+EAF+ILQYMK
Sbjct: 601 YNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMK 660

Query: 661 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTL 715
           ENDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRTL
Sbjct: 661 ENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTL 720

BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: gi|449453081|ref|XP_004144287.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Cucumis sativus])

HSP 1 Score: 1269.2 bits (3283), Expect = 0.0e+00
Identity = 652/723 (90.18%), Postives = 679/723 (93.91%), Query Frame = 1

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPP--ITTHLSFPIISAAAASTTSFSSVVTCS 60
           MLLLSPLPLSTRFPAT L SP VFLHH + P   TTHLSF   SA A   TS SS+VTC 
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPPVFLHHHHNPHIATTHLSFSFFSAPA---TSSSSLVTCY 60

Query: 61  TSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPK--SDSDSEVEFDSVLDSDSE 120
           TSSD LE DVFEND VS QSRRYDFTPLLDFLSRS AYPK  SDSDSEVEFDS  +S S+
Sbjct: 61  TSSDNLEFDVFENDPVSLQSRRYDFTPLLDFLSRSSAYPKFDSDSDSEVEFDSTFNSGSD 120

Query: 121 SDKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFS 180
           SD ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQ+HNLCFS
Sbjct: 121 SDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFS 180

Query: 181 YELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQ 240
           YELLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQ
Sbjct: 181 YELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQ 240

Query: 241 DGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDP 300
           DG+QSDF+NYSLIIQSLTRTNKID+P+LQKLYEEIESDKIELDG LLNDIILGFAKAGDP
Sbjct: 241 DGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDP 300

Query: 301 NRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360
           NRALYFLSMVQASGLNPKTSTFVA+ISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNAL
Sbjct: 301 NRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360

Query: 361 LKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNV 420
           LKGYA+KGSLKEAESI+SEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNV
Sbjct: 361 LKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV 420

Query: 421 QPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAME 480
           QPNTFIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAME
Sbjct: 421 QPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME 480

Query: 481 TYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLG 540
           TY+RMLSEGIEPDVVTWNTLIDCHRKHGYH+RAAELFEEMQERGY PCPTTYNIMINSLG
Sbjct: 481 TYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG 540

Query: 541 EQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSST 600
           EQEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+T
Sbjct: 541 EQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSAT 600

Query: 601 MYNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYM 660
           MYNALINAFAQ+     AVNAYRVM SDGL+PSLLALNSLINAFGEDRRDIEAF+ILQYM
Sbjct: 601 MYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYM 660

Query: 661 KENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRT 715
           KENDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRT
Sbjct: 661 KENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRT 720

BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: gi|1009133900|ref|XP_015884153.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 1049.7 bits (2713), Expect = 2.4e-303
Identity = 542/720 (75.28%), Postives = 610/720 (84.72%), Query Frame = 1

Query: 2   LLLSPLPLSTRFPATQLPSPTVF-LHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS 61
           +LL PLP+ +RFP+ QL SP +   HH N     H+  P +SA A ST+        STS
Sbjct: 1   MLLLPLPVPSRFPSIQLASPIIIGRHHHN-----HIFQPPVSAVATSTSCTHDEAFLSTS 60

Query: 62  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 121
           +     D  END  S ++RRYDFTPLL+FLS S               S LDSDS+S+ A
Sbjct: 61  NSKRRFDD-ENDLHSLRNRRYDFTPLLNFLSNS-----------TNTSSALDSDSDSEPA 120

Query: 122 ---SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSY 181
              SPTSLDP EF LAE+YRAVPAPLWHSLLKSLC+SSSSIGL YAVV WLQKHNLCFSY
Sbjct: 121 KSGSPTSLDPEEFLLAESYRAVPAPLWHSLLKSLCSSSSSIGLAYAVVFWLQKHNLCFSY 180

Query: 182 ELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 241
           ELLYSILIHALGRSEKLYEAF+LSQ QTLT LTYNALIGACARNND EKALNL+SRMRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFLLSQRQTLTALTYNALIGACARNNDLEKALNLMSRMRQD 240

Query: 242 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 301
           G+QSDFVNYSL+IQSLTRTNKI+ P+LQKLY EIE+DKIELDGQLLNDII+GFAKAGDPN
Sbjct: 241 GFQSDFVNYSLVIQSLTRTNKINSPLLQKLYREIENDKIELDGQLLNDIIVGFAKAGDPN 300

Query: 302 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 361
           RA++FL+  QA GL+P+T+T VA+I ALGN GRT EAE IFEE+KEGGLKPR +A+NALL
Sbjct: 301 RAMHFLAAAQAIGLSPRTATLVAVILALGNSGRTVEAECIFEEIKEGGLKPRTRAYNALL 360

Query: 362 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 421
           KGY K GSLK+AESIVSEMEK+G++PD+HTY LL+DAYAN G W+SAR +LK+MEA NVQ
Sbjct: 361 KGYVKAGSLKDAESIVSEMEKNGVAPDDHTYSLLIDAYANAGRWESARIVLKEMEASNVQ 420

Query: 422 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 481
           PN+++FSRILASYRDRGEWQKTF+VLREMK+  V+PDRHFYNVMIDTFGK+NC+DHAM T
Sbjct: 421 PNSYVFSRILASYRDRGEWQKTFQVLREMKDSGVRPDRHFYNVMIDTFGKYNCLDHAMAT 480

Query: 482 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 541
           ++RMLSEGI+PD VTWNTLIDCH K G H RA ELFEEM E G  PC TTYNIMINS GE
Sbjct: 481 FDRMLSEGIQPDTVTWNTLIDCHCKSGRHARAEELFEEMHESGCSPCATTYNIMINSFGE 540

Query: 542 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 601
           QE+WD+VK LL KMQSQGLLPNV+TYTTLVDIYGQSGRFNDAIECLE MKSAGLKPS+TM
Sbjct: 541 QERWDDVKGLLVKMQSQGLLPNVVTYTTLVDIYGQSGRFNDAIECLEVMKSAGLKPSTTM 600

Query: 602 YNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 661
           YNALINA+AQ+     AVNA+RVMR+DGLKPSLLALNSLINAFGEDRRD EAF +LQYMK
Sbjct: 601 YNALINAYAQRGLSEQAVNAFRVMRADGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 660

Query: 662 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTL 713
           ENDVKPDVVTYTTLMKALIRV+KF +VPAVYEEMILSGCTPD KARAMLRSAL+YMK+T+
Sbjct: 661 ENDVKPDVVTYTTLMKALIRVDKFHEVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTI 703

BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: gi|720032524|ref|XP_010266137.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial isoform X1 [Nelumbo nucifera])

HSP 1 Score: 1011.5 bits (2614), Expect = 7.1e-292
Identity = 515/719 (71.63%), Postives = 601/719 (83.59%), Query Frame = 1

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHH--QNPPITTHLSFPIISAAAASTTSFSSVVTCS 60
           MLLL PLP  TRFP+  + SP +  HH    PPIT              TT+ +S  T +
Sbjct: 1   MLLLPPLP-PTRFPSINVFSPNLRHHHFFPLPPITLF------------TTAVTSATTIA 60

Query: 61  TSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESD 120
           T+S +L+      +  S  +RRYDF PL+ FLS + AY            +  D+DS+SD
Sbjct: 61  TTSSSLD------NCNSLHNRRYDFDPLIRFLSSTTAY-----------STTSDTDSDSD 120

Query: 121 KASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYE 180
             SPTSLDP E +LAE+YRAVPAPLWHSLLKSLC+S S++   YA+V WLQ+HNLCFSYE
Sbjct: 121 TDSPTSLDPIELRLAESYRAVPAPLWHSLLKSLCSSPSTLETAYALVSWLQRHNLCFSYE 180

Query: 181 LLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDG 240
           LLYSILIHALGRS+KLYEAF+LSQ Q LTPLTYNALIGACARN+D EKALNL+SRMR+DG
Sbjct: 181 LLYSILIHALGRSDKLYEAFLLSQRQILTPLTYNALIGACARNDDLEKALNLMSRMRRDG 240

Query: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300
           YQSDFVNYSLIIQSLTRTNK+D  +LQKLY E+E+DKIELDGQLLND+I+ FAKAGDP+R
Sbjct: 241 YQSDFVNYSLIIQSLTRTNKVDSSVLQKLYGEMETDKIELDGQLLNDLIVAFAKAGDPDR 300

Query: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360
           A++FL+MVQ  GL+PKT+T VA+I+ALGN GRTEEAEAIFEEMKEGGLKPR +A+NALLK
Sbjct: 301 AMFFLAMVQGQGLSPKTATLVAVIAALGNLGRTEEAEAIFEEMKEGGLKPRTRAYNALLK 360

Query: 361 GYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQP 420
           GY K GSL++AESIVSEME+ GLSPDEHTY LL+DAYAN G W+SAR +LK+MEA NVQP
Sbjct: 361 GYVKTGSLRDAESIVSEMERGGLSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQP 420

Query: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETY 480
           N+++FSRILASYRDRGEWQK+F VL+EM++  V+PDRHFYNVMIDTFGK+NC++H M T+
Sbjct: 421 NSYVFSRILASYRDRGEWQKSFSVLKEMRSSGVRPDRHFYNVMIDTFGKYNCLEHTMATF 480

Query: 481 ERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQ 540
           ERM  +GI+PD VTWNTLIDCH K G H+RA ELF+ MQE G  PC TTYNIMINSLGEQ
Sbjct: 481 ERMQLDGIQPDTVTWNTLIDCHCKSGRHDRAEELFQAMQESGCLPCTTTYNIMINSLGEQ 540

Query: 541 EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600
           EKW+EVK LLGKMQSQGLLPNV+TYTTL+DIYGQSGRF DAIECLEAMKSAGLKPS TMY
Sbjct: 541 EKWEEVKSLLGKMQSQGLLPNVVTYTTLIDIYGQSGRFKDAIECLEAMKSAGLKPSPTMY 600

Query: 601 NALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKE 660
           +AL+NA+AQ+     AVNA+RVMR+DGLKPS+L LNSLINAFGEDRRD EAF +LQYMKE
Sbjct: 601 HALVNAYAQRGLSEQAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDTEAFAVLQYMKE 660

Query: 661 NDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTL 713
           ND++PDVVTYTTLMKALIRVEKF+KVPA+YE+MILSGCTPD KARAMLRSAL+YM++TL
Sbjct: 661 NDLQPDVVTYTTLMKALIRVEKFEKVPAIYEDMILSGCTPDRKARAMLRSALRYMRQTL 689

BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: gi|728842770|gb|KHG22213.1| (hypothetical protein F383_28108 [Gossypium arboreum])

HSP 1 Score: 1001.1 bits (2587), Expect = 9.7e-289
Identity = 516/722 (71.47%), Postives = 600/722 (83.10%), Query Frame = 1

Query: 2   LLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTSS 61
           +LL P PL  RFP+ QL SP + LH  +   T+  +     AAAA+ TS +         
Sbjct: 1   MLLLPPPLPVRFPSIQLSSPIIRLHFSHH--TSLCTSAAAEAAAAAETSITLSFDKERDR 60

Query: 62  DAL-ELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 121
           D   + +  END +S   RRYDFTPLL++LSRS +                 SDS+SD A
Sbjct: 61  DRYGDENDDENDVLSLHKRRYDFTPLLNYLSRSNSA----------------SDSDSDSA 120

Query: 122 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSS-----IGLGYAVVLWLQKHNLCF 181
           SPTSLDP EFQLAE+YRAVPAPLWHSLLKSLCASSSS     I L YAVV WLQ+HNLCF
Sbjct: 121 SPTSLDPIEFQLAESYRAVPAPLWHSLLKSLCASSSSSSSSSINLAYAVVSWLQRHNLCF 180

Query: 182 SYELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMR 241
           SYELLYSILIHALGRSEKLYEAF+LSQ Q+LTPLTYNALI ACARN+D EKALNL+SRMR
Sbjct: 181 SYELLYSILIHALGRSEKLYEAFLLSQRQSLTPLTYNALINACARNDDLEKALNLMSRMR 240

Query: 242 QDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGD 301
           QDGYQSDFVNYSLIIQSLTR NKID  +LQKLY EIE D+IE+DGQLLNDII+GFAKA D
Sbjct: 241 QDGYQSDFVNYSLIIQSLTRNNKIDSSLLQKLYGEIECDRIEVDGQLLNDIIVGFAKAND 300

Query: 302 PNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNA 361
           P+RAL FL+M QA GL+PKT+T VA+I +LG  GR  EAEA+FEEMK  GLKPR +A+NA
Sbjct: 301 PSRALKFLAMAQAIGLSPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGSGLKPRTRAYNA 360

Query: 362 LLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARN 421
           LLKGY K GSLK+AE +VSEME+SG+SPDEHTY LL+DAY+N G W+SAR +LK+MEA N
Sbjct: 361 LLKGYVKSGSLKDAELVVSEMERSGVSPDEHTYSLLIDAYSNAGRWESARIVLKEMEANN 420

Query: 422 VQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAM 481
           V+PN+F++SRILASYR++GEWQ++F+VL+EMK+  ++PDRHFYNVMIDTFGK+NC+DHAM
Sbjct: 421 VKPNSFVYSRILASYRNKGEWQRSFQVLKEMKSNGIQPDRHFYNVMIDTFGKYNCLDHAM 480

Query: 482 ETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSL 541
            T++RMLSEGIEPD VTWNTLIDCH K G+H+RA +LFEEM+E+GY PC TTYNIMINSL
Sbjct: 481 ATFDRMLSEGIEPDTVTWNTLIDCHCKAGWHDRAEQLFEEMKEKGYSPCTTTYNIMINSL 540

Query: 542 GEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSS 601
           GEQE+WD+VK LLGKMQ +GLLPN++TYTTLVDIYG+SGRF+DAIECLE MKSAGLKPSS
Sbjct: 541 GEQERWDDVKSLLGKMQGEGLLPNIVTYTTLVDIYGKSGRFSDAIECLELMKSAGLKPSS 600

Query: 602 TMYNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQY 661
           TMYNALINA+AQ+     A+NA RVM +DGLKP+LLALNSLINAFGEDRRD+EAF +LQY
Sbjct: 601 TMYNALINAYAQRGLSEQAMNALRVMGADGLKPNLLALNSLINAFGEDRRDVEAFAVLQY 660

Query: 662 MKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKR 713
           MKEN +KPDVVTYTTLMKALIRV+KF KVPAVYEEMILSGCTPD KARAMLRSAL+YMK+
Sbjct: 661 MKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQ 704

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP413_ARATH2.6e-27869.58Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidop... [more]
RF1_ORYSI3.3e-5526.71Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1[more]
PP362_ARATH9.7e-5525.24Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN... [more]
PP247_ARATH6.9e-5327.50Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
PP178_ARATH1.2e-5230.39Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0KCZ6_CUCSA0.0e+0090.18Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358090 PE=4 SV=1[more]
A0A0B0P655_GOSAR6.7e-28971.47Uncharacterized protein OS=Gossypium arboreum GN=F383_28108 PE=4 SV=1[more]
W9R4R5_9ROSA8.8e-28971.61Uncharacterized protein OS=Morus notabilis GN=L484_024883 PE=4 SV=1[more]
A0A061FD59_THECC8.8e-28971.81Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1 OS=Theobroma c... [more]
A0A061FDX5_THECC7.4e-28871.99Pentatricopeptide repeat (PPR-like) superfamily protein isoform 2 (Fragment) OS=... [more]
Match NameE-valueIdentityDescription
AT5G42310.11.5e-27969.58 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G02860.15.4e-5625.24 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G22470.13.9e-5427.50 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G31400.16.7e-5430.39 genomes uncoupled 1[more]
AT2G18940.11.9e-5326.05 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659129812|ref|XP_008464858.1|0.0e+0091.27PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial ... [more]
gi|449453081|ref|XP_004144287.1|0.0e+0090.18PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial ... [more]
gi|1009133900|ref|XP_015884153.1|2.4e-30375.28PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial ... [more]
gi|720032524|ref|XP_010266137.1|7.1e-29271.63PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial ... [more]
gi|728842770|gb|KHG22213.1|9.7e-28971.47hypothetical protein F383_28108 [Gossypium arboreum][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0009658 chloroplast organization
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0042651 thylakoid membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003727 single-stranded RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07920.1Cp4.1LG11g07920.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 317..345
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 350..396
score: 1.1E-11coord: 488..535
score: 4.5E-15coord: 210..254
score: 2.2E-7coord: 626..671
score: 6.1E-10coord: 558..606
score: 5.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 407..467
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 661..694
score: 8.0E-8coord: 386..420
score: 6.2E-6coord: 629..660
score: 5.3E-4coord: 317..348
score: 6.6E-7coord: 458..490
score: 1.3E-7coord: 527..560
score: 3.8E-6coord: 352..385
score: 3.6E-8coord: 210..240
score: 1.9E-6coord: 423..454
score: 0.002coord: 561..594
score: 8.5E-8coord: 491..523
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 489..523
score: 13.351coord: 384..418
score: 11.762coord: 349..383
score: 12.145coord: 314..348
score: 11.827coord: 624..658
score: 8.966coord: 279..313
score: 8.418coord: 242..278
score: 6.511coord: 524..558
score: 10.534coord: 207..241
score: 11.17coord: 454..488
score: 11.356coord: 419..453
score: 9.745coord: 659..693
score: 11.542coord: 559..593
score: 12
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 317..477
score: 6.5E-6coord: 478..678
score: 2.3E-7coord: 210..259
score: 6.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 294..418
score: 2.66E-6coord: 453..584
score: 2.6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 188..708
score: 0.0coord: 6..33
score: 0.0coord: 59..92
score:
NoneNo IPR availablePANTHERPTHR24015:SF788SUBFAMILY NOT NAMEDcoord: 59..92
score: 0.0coord: 188..708
score: 0.0coord: 6..33
score: