Cp4.1LG11g07360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g07360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTIR-NBS-LRR disease resistance protein
LocationCp4.1LG11 : 5989618 .. 5993116 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATGTGTGGTGTCGCCCCTTTCTCATTTGGTCTACTCTTGTCGGAGAACAAATTCTCTAATCAAATGTTGTCGGAAAACATATCCTCTAGTCCACCTTCATGTCCCCATAACTTTACGCCGTTATGGTATCCCGAGTTGAGAAATTCAAAACTTTCCTCAGCGTTTCCAAGAAATGGATGCCACTGGTTGTGGATTGTTGAGTAGAAGTCCAATCAAGATCAATCAGGTTTGTCTCTTCCCATTTCATTTCTCTTCTTTGAATCGGTACTATTCATATGCTTTATAGGTCATTACAGGTATTTATAGACATTTCTTCTAATCAATGGAGAAATTCTGAAAAGGTTCAACTATCGAACTATATTAAATCCAGTGAAGGTTAGATTTCGATACTATCTCAACATGGAAAGAACTTTGACTACCTATGCTTTGTTCAAAGTGGACGAAATGGAAAAGCAACCATATCTGGGGCAGACCATAATTTCCTTTAACATATGCTACGGTGATCAACTCCAACGTTCTTGTAAGAGAGAATTTTCATCATTAATGAATTTATATGTTGTTAATATCAACTACTTCTTTGGTGGCAAATGACTGGAATCATGTTATAGTATGGTTTGATGTTTTGGAATTCTTTGTGGTTAATGTAACTATAAAAAATTGTGGTGTCCATGTTACTAAAGATGTCGATGAGATAGAAAACGATGCTGGATGGTTAGGGATAATCGACCCGTGGAATTGCCAAGTCCGATAAATGAAATTACATCCTTACCAACTTTATTGGTTGGTTTCTTGTGTTATTACGTTACTTTCATTCTTTTGAGTGATATTATTGATTGTTTCTATAAGGCTTAATGAGTTGTCAAAAAAATTTAAGGGTTTACCTTTTTATCAACAAATCTTTTTGTTTTATAATGCCTATGCTTTGTTTTTAATTATTATCATTTAAGTTTAGATTATAAGACATTTTTGAAATAATATTGCACTTTCCATTTCCATTTCCTTTTCTAGACTGATTAAGATTTTTTTGAATTGTTCAAGATTGGGTGGAGGGTAAGATGAGGCCAGATAATTTATTGATAAAATACCTAAATTTTTTTACTAAAATACTTTATTCCTAAATCTTAGTAACTTTATTTTTAAAATATCTAAATTATTGTCCAATTGATTCATACCATTATTAGGTTTGACAATCATATTTTAACACACTACCCAACTTGGACATATCTTGTGCTTGTATATCTATAATGATAATAGATGGGAAAAATTGGATTATCTTTCCCGTTTTATAGATACACTGCGACCCCCCTTTATGAGGAGGCACCCCTTCTCCCGAAGTTACAGGTTCTTAAGTTGGATATATCTTGTGGTTAGTATAATTTTGGTGATTTGCACCAAAGAGGAATGAATGTTGGTGTTGTAGAAATTTACAAATCATTCCTTTAAAGTCATTGTTTTGTCTACTCACACAAATAAATATAATCAGTTTTTGTGAGTTTACAACTCATTATAAACTCCAACAACACAAATTAATTAGTTAAAATTAATTGATAATGAATGTCATTCCCGTGGAGAAGTTTATAAATTCCATCCTAGTATAAAAGAAGTATCAATAAAATATTATAAAATTTTTCTTATACTTTTTTGTCATTAAAATTTGTTAAATTCATATGTGATAATGACATAGCGAAAGCCAATATTTCACGGAGATAATGACATAGTGAAAGCCAGTATTCCATTAAGATCGTGACTTAATTTCTCCAGGTGCATGACGGTGAAGTTTTGAAATGGTCTTAGGTCGTGAAATAGGAAGTAATATCACAAGCAACATATTCTTTACAGATTTGATAGATTTGTAAGGGTGGATATAAAAGAATATGATATTAAAGGAGAACCTAGTTGGAAATGTATGAACCATGTAGAAAATGGAGACTTTGTTGTTCAATATATGAAACATGTAGAGAAGCTATTATGAACGAGCCAAGAACAAGAACAAAGAGCAAACAAACCCTTTAAAAATAAATTCAAGAAGAAAAAACAAAACAAAGGTGAGTAGACATTTCCATCTTATCTCAAGTAAAATACTTTTGATATTTTATTCATTGTGGATTTGAGATATCGTACAAAACTTAACCTCATCAACCACTAGACATATTCACACTCACCATCAATTATTGAAGATAAGTTTCTCATTGCAAGCTTGCTTATTTGTTCTTGAAAATCATATTTTCAAGAATTCGATTATCTCTATCTTTTCGAATTTTATTAGCTTTGGTTGCTCAATTAATCTTGAGTTTGCACAACTCGATGTAAAAACTATTTCTTGTATGGAGATTTGAAAGAAGAAATATATATGATGCAACTAGTTGGTTTTCGAGTAGTTGTACACCCAACATTTGGTATGTAGATTGAAAAAAATCTTTGTATGGGTTGTTGGTGATGTTGAGGATTGTTGGGAGTGAGTCCCACATTGGCTAATTTAGGGAATGATGATGGGTTTATAAACAAAAGAATACATCTTCATTGTTATGAGGTCTGTTGGGGAAGGAGACAATCTTGCAATAAGCATTGAGACGTATGTAAAATAAAGAAATAAATAAAAACTATTAATATGATAAAAATTTAAGGATAAAAAAAATAGATTATTATAGATTTCTTAGAAAATTTTATGTGAGGCTAACCCTTTATTAAATAGTATAGTCTTGCCTAGAAACAAATTTGTACTCTACCCTCATGTCTTCATAAGTTTATGTCCTTGAGGAATTGTAAGTTTCTTCGACAAATTCTAAACCTTTCTTCATAAGTTTATGTCCTTGAGGAATTGTAAGTTTCTTCGACAAATTCTAAACCTTTCTCAGCATATGAAAAAAATGGATGTCAGTGGTTGTGAATCGTTGGTTACCTATGTTAAATTTAGAGTGGATGGAGATTCATATCAAAGGGAAGCCTTAATTTCATATAGAAAGAACATGACTACCTATGTTAAATTTAGAGTGGATGGAGATTCATATCAAGGGGAAGCCTTAATTTCATGTAACATATTCATCCGCTAATCCAAAATTCTTTTATGACCAAATTTCCATCATCAACATAGGTGGTTAGTAACAACTTCTTCTCCAACATTTAGTAGCTCCTTAGTGGCGAATGATTGGAATAGTGTTATAGTCTGGTTTGAAGTTGTGAAACATCGTGAGGATAATATAACTATAAGAAGTTGTGGTGTCCATCTCACTGAGGTCCATGGGATATCCGAAAATGATGTTAAGGGGCCAGGGGTAATATATACAGATTTTGATGACTCAGAGGAATTGTCAAGCCGGTGAGGGAGCTATTGGTTTCTTGTGTTGTTTTGAGTAAATTATGCTTCTTTTCATATATATGATGTTGATAATGGCATAGGGATGTTATCAAATCCTTCGCTCAAGAAGTCTCCACCATATCATATTGCAATGCAATGTTGCATGTAGTGAATTTAGCAGTTGAAGCTGATTCTTAA

mRNA sequence

ATGAACATAACAAATTCTCTAATCAAATGTTGTCGGAAAACATATCCTCTAGTCCACCTTCATGTCCCCATAACTTTACGCCGTTATGAAATTCAAAACTTTCCTCAGCGTTTCCAAGAAATGGATGCCACTGGTTGTGGATTGTTGAGTAGAAGTCCAATCAAGATCAATCAGACATTTCTTCTAATCAATGGAGAAATTCTGAAAAGGTTCAACTATCGAACTATATTAAATCCAGTGAAGGTTAGATTTCGATACTATCTCAACATGGAAAGAACTTTGACTACCTATGCTTTGTTCAAAGTGGACGAAATGGAAAAGCAACCATATCTGGGGCAGACCATAATTTCCTTTAACATATGCTACGTATGGTTTGATGTTTTGGAATTCTTTGTGGTTAATGTAACTATAAAAAATTGTGGTGTCCATGTTACTAAAGATGTCGATGAGATAGAAAACGATGCTGGATGGTTAGGGATAATCGACCCGTGGAATTGCCAAAAAATTTTATGTGAGGCTAACCCTTTATTAAATAGTATAGTCTTGCCTAGAAACAAATTTGTACTCTACCCTCATTTTATGTCCTTGAGGAATTGTAAGTTTCTTCGACAAATTCTAAACCTTTCTCAGCATATGAAAAAAATGGATGTCAGTGGTTGTGAATCGTTGGTTACCTATGTTAAATTTAGAGTGGATGGAGATTCATATCAAAGGGAAGCCTTAATTTCATATAGAAAGAACATGACTACCTATAGTGGATGGAGATTCATATCAAGGGGAAGCCTTAATTTCATGTGGTTAGTAACAACTTCTTCTCCAACATTTAGTAGCTCCTTAGTGGCGAATGATTGGAATAGTGTTATAGTCTGGTTTGAAGTTGTGAAACATCGTGAGGATAATATAACTATAAGAAGTTGTGGTGTCCATCTCACTGAGGTCCATGGGATATCCGAAAATGATGTTAAGGGGCCAGGGGTAATATATACAGATTTTGATGACTCAGAGGAATTGTCAAGCCGGGATGTTATCAAATCCTTCGCTCAAGAAGTCTCCACCATATCATATTGCAATGCAATGTTGCATGTAGTGAATTTAGCAGTTGAAGCTGATTCTTAA

Coding sequence (CDS)

ATGAACATAACAAATTCTCTAATCAAATGTTGTCGGAAAACATATCCTCTAGTCCACCTTCATGTCCCCATAACTTTACGCCGTTATGAAATTCAAAACTTTCCTCAGCGTTTCCAAGAAATGGATGCCACTGGTTGTGGATTGTTGAGTAGAAGTCCAATCAAGATCAATCAGACATTTCTTCTAATCAATGGAGAAATTCTGAAAAGGTTCAACTATCGAACTATATTAAATCCAGTGAAGGTTAGATTTCGATACTATCTCAACATGGAAAGAACTTTGACTACCTATGCTTTGTTCAAAGTGGACGAAATGGAAAAGCAACCATATCTGGGGCAGACCATAATTTCCTTTAACATATGCTACGTATGGTTTGATGTTTTGGAATTCTTTGTGGTTAATGTAACTATAAAAAATTGTGGTGTCCATGTTACTAAAGATGTCGATGAGATAGAAAACGATGCTGGATGGTTAGGGATAATCGACCCGTGGAATTGCCAAAAAATTTTATGTGAGGCTAACCCTTTATTAAATAGTATAGTCTTGCCTAGAAACAAATTTGTACTCTACCCTCATTTTATGTCCTTGAGGAATTGTAAGTTTCTTCGACAAATTCTAAACCTTTCTCAGCATATGAAAAAAATGGATGTCAGTGGTTGTGAATCGTTGGTTACCTATGTTAAATTTAGAGTGGATGGAGATTCATATCAAAGGGAAGCCTTAATTTCATATAGAAAGAACATGACTACCTATAGTGGATGGAGATTCATATCAAGGGGAAGCCTTAATTTCATGTGGTTAGTAACAACTTCTTCTCCAACATTTAGTAGCTCCTTAGTGGCGAATGATTGGAATAGTGTTATAGTCTGGTTTGAAGTTGTGAAACATCGTGAGGATAATATAACTATAAGAAGTTGTGGTGTCCATCTCACTGAGGTCCATGGGATATCCGAAAATGATGTTAAGGGGCCAGGGGTAATATATACAGATTTTGATGACTCAGAGGAATTGTCAAGCCGGGATGTTATCAAATCCTTCGCTCAAGAAGTCTCCACCATATCATATTGCAATGCAATGTTGCATGTAGTGAATTTAGCAGTTGAAGCTGATTCTTAA

Protein sequence

MNITNSLIKCCRKTYPLVHLHVPITLRRYEIQNFPQRFQEMDATGCGLLSRSPIKINQTFLLINGEILKRFNYRTILNPVKVRFRYYLNMERTLTTYALFKVDEMEKQPYLGQTIISFNICYVWFDVLEFFVVNVTIKNCGVHVTKDVDEIENDAGWLGIIDPWNCQKILCEANPLLNSIVLPRNKFVLYPHFMSLRNCKFLRQILNLSQHMKKMDVSGCESLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLTEVHGISENDVKGPGVIYTDFDDSEELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS
Homology
[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: A0A0A0LLK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020890 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.4e-34
Identity = 89/157 (56.69%), Postives = 104/157 (66.24%), Query Frame = 1 

Query: 223  LVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFIS-------RGSLNFMWLVTTSSPTF 282
            L TY   +V GDSYQ  AL+S +     + G+R  S         +  + WLVTTSSPTF
Sbjct: 1106 LATYATLQVVGDSYQGMALVSCK----IFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPTF 1165

Query: 283  SSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLT-EVHGISENDVKGPGVIYTDFDDS 342
            S+SL  N+WN V VWFEVVK  E  +TI+ CGVHLT EVHGI +NDVKGPGV+YT FD  
Sbjct: 1166 STSLEMNEWNHVTVWFEVVKCSEATVTIKCCGVHLTEEVHGI-QNDVKGPGVVYTVFDQL 1225

Query: 343  EELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS 372
            ++L SRDVIKSF QEVS  S CNAMLH  N  V  DS
Sbjct: 1226 DKLPSRDVIKSFGQEVSAKSDCNAMLHAENFPVWNDS 1257

[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: A0A0A0LJM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022270 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-14
Identity = 64/156 (41.03%), Postives = 83/156 (53.21%), Query Frame = 1 

Query: 222  SLVTYVKFRVDGDSYQREALIS---YRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSS 281
            +L   V F+V+G+S +R A IS   +  N   +S  R        +MWLVTTS      S
Sbjct: 1008 TLAACVSFKVNGNSSERGARISCNIFVCNRLYFSLSRPFLPSKSEYMWLVTTSLAL--GS 1067

Query: 282  LVANDWNSVIVWFEVVK-HREDNITIRSCGVHLTEVHGISENDVKGPGVIYTDFDDSEEL 341
            +  NDWN V+VWFEV + H E N TI   GVH+TE     + DVK P V Y DF   E+L
Sbjct: 1068 MEVNDWNKVLVWFEVHEAHSEVNATITRYGVHVTEELHAIQTDVKWPMVNYADFYQLEKL 1127

Query: 342  SSRDV----IKSFAQEVSTISYCNAMLHVVNLAVEA 370
             S D+    +K F +E+S  S   AML+  N   EA
Sbjct: 1128 QSLDIEELLLKRFFEEMSCWSNSQAMLYAANYDPEA 1161

[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: E5GB36_CUCME (TIR-LRR-NBS disease resistance protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.4e-13
Identity = 58/144 (40.28%), Postives = 78/144 (54.17%), Query Frame = 1 

Query: 222 SLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVA 281
           +L   V F+V+GDS +R +   +  N    S  R        +MWLVTTS      SL A
Sbjct: 840 TLAACVSFKVNGDSSRRISCNIFICNRFHCSFSRPFLPSKSEYMWLVTTSLAW--GSLDA 899

Query: 282 NDWNSVIVWFEVVKHREDNITIRSCGVHLTEVHGISENDVKGPGVIYTDFDDSEELSSRD 341
            DWN V+V FEV    E N++IRS GVH+TE    ++ DVK P V Y DF   E+L + D
Sbjct: 900 QDWNKVVVLFEV--DDEVNLSIRSYGVHVTEEFNGTQTDVKWPVVNYGDFYQPEKLQNLD 959

Query: 342 V----IKSFAQEVSTISYCNAMLH 362
           +    +K    E+S +S C A+LH
Sbjct: 960 IEDILVKRLFDELSYLSNCKAVLH 979

[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: E7CHD3_CUCSA (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.6e-13
Identity = 59/153 (38.56%), Postives = 76/153 (49.67%), Query Frame = 1 

Query: 222 SLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVA 281
           +L   V F+V+G+S +RE                        +MWLVTTS      S+  
Sbjct: 688 TLAACVSFKVNGNSSERE------------------------YMWLVTTSLAL--GSMEV 747

Query: 282 NDWNSVIVWFEVVK-HREDNITIRSCGVHLTEVHGISENDVKGPGVIYTDFDDSEELSSR 341
           NDWN V+VWFEV + H E N TI   GVH+TE     + DVK P V Y DF   E+L S 
Sbjct: 748 NDWNKVLVWFEVHEAHSEVNATITRYGVHVTEELHAIQTDVKWPMVNYADFYQLEKLQSL 807

Query: 342 DV----IKSFAQEVSTISYCNAMLHVVNLAVEA 370
           D+    +K F +E+S  S   AML+  N   EA
Sbjct: 808 DIEELLLKRFFEEMSCWSNSQAMLYAANYDPEA 814

[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: A0A0A0LIP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022780 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11
Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 1 

Query: 222 SLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVA 281
           +L   V F V+GDS +R +   +  N    S  R        ++WLV+TS      S+  
Sbjct: 319 TLAACVSFTVNGDSSERISCNIFICNRLHCSFSRSFLPSKSEYVWLVSTSLAW--GSMEV 378

Query: 282 NDWNSVIVWFEVVKHREDNITIRSCGVHLTE-VHGISENDVKGPGVIYTDFDDSEELSS 340
           NDW  V+VWFEV  H E N +IR CGVH+TE +HGI + DVK P V Y DF   E+L +
Sbjct: 379 NDWKEVLVWFEV--HDEVNTSIRRCGVHVTEELHGIIQMDVKWPVVNYADFYQLEKLQN 433

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|659070453|ref|XP_008455171.1| (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 3.7e-34
Identity = 89/164 (54.27%), Postives = 110/164 (67.07%), Query Frame = 1 

Query: 216  DVSGCESLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFIS-------RGSLNFMWLV 275
            D++   +L TY  F+V GDS++  AL+S +     + G+R  S         +  + WLV
Sbjct: 1097 DLNMERTLATYATFQVVGDSHRGMALVSCK----IFIGYRLQSCFMRKFPSSTSEYTWLV 1156

Query: 276  TTSSPTFSSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLT-EVHGISENDVKGPGVI 335
            TTSSPTFS+SL  N+WN V VWFEVVK  E  +TI+ CGVHLT EVHGI +NDVKGPGVI
Sbjct: 1157 TTSSPTFSTSLEMNEWNHVTVWFEVVKCSEVTVTIKCCGVHLTEEVHGI-QNDVKGPGVI 1216

Query: 336  YTDFDDSEELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS 372
            YT FD  ++L SRDV+KSFAQEVS  S CNA+LH  N  V  DS
Sbjct: 1217 YTVFDQPDKLPSRDVVKSFAQEVSAKSDCNAILHAENFPVWNDS 1255

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|700205747|gb|KGN60866.1| (hypothetical protein Csa_2G020890 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 4.9e-34
Identity = 89/157 (56.69%), Postives = 104/157 (66.24%), Query Frame = 1 

Query: 223  LVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFIS-------RGSLNFMWLVTTSSPTF 282
            L TY   +V GDSYQ  AL+S +     + G+R  S         +  + WLVTTSSPTF
Sbjct: 1106 LATYATLQVVGDSYQGMALVSCK----IFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPTF 1165

Query: 283  SSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLT-EVHGISENDVKGPGVIYTDFDDS 342
            S+SL  N+WN V VWFEVVK  E  +TI+ CGVHLT EVHGI +NDVKGPGV+YT FD  
Sbjct: 1166 STSLEMNEWNHVTVWFEVVKCSEATVTIKCCGVHLTEEVHGI-QNDVKGPGVVYTVFDQL 1225

Query: 343  EELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS 372
            ++L SRDVIKSF QEVS  S CNAMLH  N  V  DS
Sbjct: 1226 DKLPSRDVIKSFGQEVSAKSDCNAMLHAENFPVWNDS 1257

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|778666709|ref|XP_011648797.1| (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 4.9e-34
Identity = 89/157 (56.69%), Postives = 104/157 (66.24%), Query Frame = 1 

Query: 223  LVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFIS-------RGSLNFMWLVTTSSPTF 282
            L TY   +V GDSYQ  AL+S +     + G+R  S         +  + WLVTTSSPTF
Sbjct: 1106 LATYATLQVVGDSYQGMALVSCK----IFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPTF 1165

Query: 283  SSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLT-EVHGISENDVKGPGVIYTDFDDS 342
            S+SL  N+WN V VWFEVVK  E  +TI+ CGVHLT EVHGI +NDVKGPGV+YT FD  
Sbjct: 1166 STSLEMNEWNHVTVWFEVVKCSEATVTIKCCGVHLTEEVHGI-QNDVKGPGVVYTVFDQL 1225

Query: 343  EELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS 372
            ++L SRDVIKSF QEVS  S CNAMLH  N  V  DS
Sbjct: 1226 DKLPSRDVIKSFGQEVSAKSDCNAMLHAENFPVWNDS 1257

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|778674008|ref|XP_011650108.1| (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 1.1e-17
Identity = 64/153 (41.83%), Postives = 87/153 (56.86%), Query Frame = 1 

Query: 222  SLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVA 281
            +L   V F V+GDS +R +   +  N    S  R        ++WLV+TS      S+  
Sbjct: 891  TLAACVSFTVNGDSSERISCNIFICNRLHCSFSRSFLPSKSEYVWLVSTSLAW--GSMEV 950

Query: 282  NDWNSVIVWFEVVKHREDNITIRSCGVHLTE-VHGISENDVKGPGVIYTDFDDSEELSSR 341
            NDW  V+VWFEV  H E N +IR CGVH+TE +HGI + DVK P V Y DF   E+L + 
Sbjct: 951  NDWKEVLVWFEV--HDEVNTSIRRCGVHVTEELHGIIQMDVKWPVVNYADFYQLEKLQNL 1010

Query: 342  DV----IKSFAQEVSTISYCNAMLHVVNLAVEA 370
            D+    +K F +E+S++S C AMLH  + A EA
Sbjct: 1011 DIEDLLVKRFFEEMSSLSNCKAMLHAGSYAPEA 1039

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|659070449|ref|XP_008455151.1| (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-15
Identity = 71/160 (44.38%), Postives = 90/160 (56.25%), Query Frame = 1 

Query: 222  SLVTYVKFRVDGDSYQREALISYR-----KNMTTYSGWRFISRGSLNFMWLVTTSSPTFS 281
            +L   V F+V+GDS +R A IS       K  +++S  R        +MWLVTTS     
Sbjct: 1073 TLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFS--RPFLPSKSEYMWLVTTSLAW-- 1132

Query: 282  SSLVANDWNSVIVWFEVVK-HREDNITIRSCGVHLTE-VHGISENDVKGPGVIYTDFDDS 341
             S+  NDWN V+VWFEV + H E N TI  CGVH+TE +HGI + DVK P V Y DF   
Sbjct: 1133 GSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGI-QMDVKWPMVNYADFYQL 1192

Query: 342  EELSSRDV----IKSFAQEVSTISYCN-AMLHVVNLAVEA 370
            E+L S D+    +KSF + VS +S    AMLH  N   EA
Sbjct: 1193 EKLQSLDIEDLLLKSFLETVSCLSNSKAAMLHAGNYDPEA 1227

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g07360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLK3_CUCSA3.4e-3456.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020890 PE=4 SV=1[more]
A0A0A0LJM0_CUCSA1.3e-1441.03Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022270 PE=4 SV=1[more]
E5GB36_CUCME7.4e-1340.28TIR-LRR-NBS disease resistance protein (Fragment) OS=Cucumis melo subsp. melo PE... [more]
E7CHD3_CUCSA9.6e-1338.56Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1[more]
A0A0A0LIP1_CUCSA1.8e-1142.02Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022780 PE=4 SV=1[more]
BLAST of Cp4.1LG11g07360 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070453|ref|XP_008455171.1|3.7e-3454.27PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo][more]
gi|700205747|gb|KGN60866.1|4.9e-3456.69hypothetical protein Csa_2G020890 [Cucumis sativus][more]
gi|778666709|ref|XP_011648797.1|4.9e-3456.69PREDICTED: TMV resistance protein N-like [Cucumis sativus][more]
gi|778674008|ref|XP_011650108.1|1.1e-1741.83PREDICTED: TMV resistance protein N-like [Cucumis sativus][more]
gi|659070449|ref|XP_008455151.1|1.7e-1544.38PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0032559 adenyl ribonucleotide binding
molecular_function GO:0043168 anion binding
molecular_function GO:0032550 purine ribonucleoside binding
molecular_function GO:0043531 ADP binding
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07360.1Cp4.1LG11g07360.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g07360CmaCh05G009290Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g07360CmoCh05G009110Cucurbita moschata (Rifu)cmocpeB726
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g07360Cucurbita moschata (Rifu)cmocpeB155
Cp4.1LG11g07360Cucurbita moschata (Rifu)cmocpeB721
Cp4.1LG11g07360Wild cucumber (PI 183967)cpecpiB119
Cp4.1LG11g07360Cucumber (Chinese Long) v2cpecuB121
Cp4.1LG11g07360Bottle gourd (USVL1VR-Ls)cpelsiB099
Cp4.1LG11g07360Watermelon (Charleston Gray)cpewcgB123
Cp4.1LG11g07360Watermelon (97103) v1cpewmB100
Cp4.1LG11g07360Melon (DHL92) v3.5.1cpemeB090
Cp4.1LG11g07360Cucumber (Gy14) v2cgybcpeB717
Cp4.1LG11g07360Melon (DHL92) v3.6.1cpemedB113
Cp4.1LG11g07360Silver-seed gourdcarcpeB0191
Cp4.1LG11g07360Cucumber (Chinese Long) v3cpecucB0135
Cp4.1LG11g07360Cucurbita pepo (Zucchini)cpecpeB149
Cp4.1LG11g07360Cucumber (Gy14) v1cgycpeB0088
Cp4.1LG11g07360Cucurbita maxima (Rimu)cmacpeB181