Cp4.1LG11g07360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g07360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTIR-NBS-LRR disease resistance protein
LocationCp4.1LG11 : 5989618 .. 5993116 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATGTGTGGTGTCGCCCCTTTCTCATTTGGTCTACTCTTGTCGGAGAACAAATTCTCTAATCAAATGTTGTCGGAAAACATATCCTCTAGTCCACCTTCATGTCCCCATAACTTTACGCCGTTATGGTATCCCGAGTTGAGAAATTCAAAACTTTCCTCAGCGTTTCCAAGAAATGGATGCCACTGGTTGTGGATTGTTGAGTAGAAGTCCAATCAAGATCAATCAGGTTTGTCTCTTCCCATTTCATTTCTCTTCTTTGAATCGGTACTATTCATATGCTTTATAGGTCATTACAGGTATTTATAGACATTTCTTCTAATCAATGGAGAAATTCTGAAAAGGTTCAACTATCGAACTATATTAAATCCAGTGAAGGTTAGATTTCGATACTATCTCAACATGGAAAGAACTTTGACTACCTATGCTTTGTTCAAAGTGGACGAAATGGAAAAGCAACCATATCTGGGGCAGACCATAATTTCCTTTAACATATGCTACGGTGATCAACTCCAACGTTCTTGTAAGAGAGAATTTTCATCATTAATGAATTTATATGTTGTTAATATCAACTACTTCTTTGGTGGCAAATGACTGGAATCATGTTATAGTATGGTTTGATGTTTTGGAATTCTTTGTGGTTAATGTAACTATAAAAAATTGTGGTGTCCATGTTACTAAAGATGTCGATGAGATAGAAAACGATGCTGGATGGTTAGGGATAATCGACCCGTGGAATTGCCAAGTCCGATAAATGAAATTACATCCTTACCAACTTTATTGGTTGGTTTCTTGTGTTATTACGTTACTTTCATTCTTTTGAGTGATATTATTGATTGTTTCTATAAGGCTTAATGAGTTGTCAAAAAAATTTAAGGGTTTACCTTTTTATCAACAAATCTTTTTGTTTTATAATGCCTATGCTTTGTTTTTAATTATTATCATTTAAGTTTAGATTATAAGACATTTTTGAAATAATATTGCACTTTCCATTTCCATTTCCTTTTCTAGACTGATTAAGATTTTTTTGAATTGTTCAAGATTGGGTGGAGGGTAAGATGAGGCCAGATAATTTATTGATAAAATACCTAAATTTTTTTACTAAAATACTTTATTCCTAAATCTTAGTAACTTTATTTTTAAAATATCTAAATTATTGTCCAATTGATTCATACCATTATTAGGTTTGACAATCATATTTTAACACACTACCCAACTTGGACATATCTTGTGCTTGTATATCTATAATGATAATAGATGGGAAAAATTGGATTATCTTTCCCGTTTTATAGATACACTGCGACCCCCCTTTATGAGGAGGCACCCCTTCTCCCGAAGTTACAGGTTCTTAAGTTGGATATATCTTGTGGTTAGTATAATTTTGGTGATTTGCACCAAAGAGGAATGAATGTTGGTGTTGTAGAAATTTACAAATCATTCCTTTAAAGTCATTGTTTTGTCTACTCACACAAATAAATATAATCAGTTTTTGTGAGTTTACAACTCATTATAAACTCCAACAACACAAATTAATTAGTTAAAATTAATTGATAATGAATGTCATTCCCGTGGAGAAGTTTATAAATTCCATCCTAGTATAAAAGAAGTATCAATAAAATATTATAAAATTTTTCTTATACTTTTTTGTCATTAAAATTTGTTAAATTCATATGTGATAATGACATAGCGAAAGCCAATATTTCACGGAGATAATGACATAGTGAAAGCCAGTATTCCATTAAGATCGTGACTTAATTTCTCCAGGTGCATGACGGTGAAGTTTTGAAATGGTCTTAGGTCGTGAAATAGGAAGTAATATCACAAGCAACATATTCTTTACAGATTTGATAGATTTGTAAGGGTGGATATAAAAGAATATGATATTAAAGGAGAACCTAGTTGGAAATGTATGAACCATGTAGAAAATGGAGACTTTGTTGTTCAATATATGAAACATGTAGAGAAGCTATTATGAACGAGCCAAGAACAAGAACAAAGAGCAAACAAACCCTTTAAAAATAAATTCAAGAAGAAAAAACAAAACAAAGGTGAGTAGACATTTCCATCTTATCTCAAGTAAAATACTTTTGATATTTTATTCATTGTGGATTTGAGATATCGTACAAAACTTAACCTCATCAACCACTAGACATATTCACACTCACCATCAATTATTGAAGATAAGTTTCTCATTGCAAGCTTGCTTATTTGTTCTTGAAAATCATATTTTCAAGAATTCGATTATCTCTATCTTTTCGAATTTTATTAGCTTTGGTTGCTCAATTAATCTTGAGTTTGCACAACTCGATGTAAAAACTATTTCTTGTATGGAGATTTGAAAGAAGAAATATATATGATGCAACTAGTTGGTTTTCGAGTAGTTGTACACCCAACATTTGGTATGTAGATTGAAAAAAATCTTTGTATGGGTTGTTGGTGATGTTGAGGATTGTTGGGAGTGAGTCCCACATTGGCTAATTTAGGGAATGATGATGGGTTTATAAACAAAAGAATACATCTTCATTGTTATGAGGTCTGTTGGGGAAGGAGACAATCTTGCAATAAGCATTGAGACGTATGTAAAATAAAGAAATAAATAAAAACTATTAATATGATAAAAATTTAAGGATAAAAAAAATAGATTATTATAGATTTCTTAGAAAATTTTATGTGAGGCTAACCCTTTATTAAATAGTATAGTCTTGCCTAGAAACAAATTTGTACTCTACCCTCATGTCTTCATAAGTTTATGTCCTTGAGGAATTGTAAGTTTCTTCGACAAATTCTAAACCTTTCTTCATAAGTTTATGTCCTTGAGGAATTGTAAGTTTCTTCGACAAATTCTAAACCTTTCTCAGCATATGAAAAAAATGGATGTCAGTGGTTGTGAATCGTTGGTTACCTATGTTAAATTTAGAGTGGATGGAGATTCATATCAAAGGGAAGCCTTAATTTCATATAGAAAGAACATGACTACCTATGTTAAATTTAGAGTGGATGGAGATTCATATCAAGGGGAAGCCTTAATTTCATGTAACATATTCATCCGCTAATCCAAAATTCTTTTATGACCAAATTTCCATCATCAACATAGGTGGTTAGTAACAACTTCTTCTCCAACATTTAGTAGCTCCTTAGTGGCGAATGATTGGAATAGTGTTATAGTCTGGTTTGAAGTTGTGAAACATCGTGAGGATAATATAACTATAAGAAGTTGTGGTGTCCATCTCACTGAGGTCCATGGGATATCCGAAAATGATGTTAAGGGGCCAGGGGTAATATATACAGATTTTGATGACTCAGAGGAATTGTCAAGCCGGTGAGGGAGCTATTGGTTTCTTGTGTTGTTTTGAGTAAATTATGCTTCTTTTCATATATATGATGTTGATAATGGCATAGGGATGTTATCAAATCCTTCGCTCAAGAAGTCTCCACCATATCATATTGCAATGCAATGTTGCATGTAGTGAATTTAGCAGTTGAAGCTGATTCTTAA

mRNA sequence

ATGAACATAACAAATTCTCTAATCAAATGTTGTCGGAAAACATATCCTCTAGTCCACCTTCATGTCCCCATAACTTTACGCCGTTATGAAATTCAAAACTTTCCTCAGCGTTTCCAAGAAATGGATGCCACTGGTTGTGGATTGTTGAGTAGAAGTCCAATCAAGATCAATCAGACATTTCTTCTAATCAATGGAGAAATTCTGAAAAGGTTCAACTATCGAACTATATTAAATCCAGTGAAGGTTAGATTTCGATACTATCTCAACATGGAAAGAACTTTGACTACCTATGCTTTGTTCAAAGTGGACGAAATGGAAAAGCAACCATATCTGGGGCAGACCATAATTTCCTTTAACATATGCTACGTATGGTTTGATGTTTTGGAATTCTTTGTGGTTAATGTAACTATAAAAAATTGTGGTGTCCATGTTACTAAAGATGTCGATGAGATAGAAAACGATGCTGGATGGTTAGGGATAATCGACCCGTGGAATTGCCAAAAAATTTTATGTGAGGCTAACCCTTTATTAAATAGTATAGTCTTGCCTAGAAACAAATTTGTACTCTACCCTCATTTTATGTCCTTGAGGAATTGTAAGTTTCTTCGACAAATTCTAAACCTTTCTCAGCATATGAAAAAAATGGATGTCAGTGGTTGTGAATCGTTGGTTACCTATGTTAAATTTAGAGTGGATGGAGATTCATATCAAAGGGAAGCCTTAATTTCATATAGAAAGAACATGACTACCTATAGTGGATGGAGATTCATATCAAGGGGAAGCCTTAATTTCATGTGGTTAGTAACAACTTCTTCTCCAACATTTAGTAGCTCCTTAGTGGCGAATGATTGGAATAGTGTTATAGTCTGGTTTGAAGTTGTGAAACATCGTGAGGATAATATAACTATAAGAAGTTGTGGTGTCCATCTCACTGAGGTCCATGGGATATCCGAAAATGATGTTAAGGGGCCAGGGGTAATATATACAGATTTTGATGACTCAGAGGAATTGTCAAGCCGGGATGTTATCAAATCCTTCGCTCAAGAAGTCTCCACCATATCATATTGCAATGCAATGTTGCATGTAGTGAATTTAGCAGTTGAAGCTGATTCTTAA

Coding sequence (CDS)

ATGAACATAACAAATTCTCTAATCAAATGTTGTCGGAAAACATATCCTCTAGTCCACCTTCATGTCCCCATAACTTTACGCCGTTATGAAATTCAAAACTTTCCTCAGCGTTTCCAAGAAATGGATGCCACTGGTTGTGGATTGTTGAGTAGAAGTCCAATCAAGATCAATCAGACATTTCTTCTAATCAATGGAGAAATTCTGAAAAGGTTCAACTATCGAACTATATTAAATCCAGTGAAGGTTAGATTTCGATACTATCTCAACATGGAAAGAACTTTGACTACCTATGCTTTGTTCAAAGTGGACGAAATGGAAAAGCAACCATATCTGGGGCAGACCATAATTTCCTTTAACATATGCTACGTATGGTTTGATGTTTTGGAATTCTTTGTGGTTAATGTAACTATAAAAAATTGTGGTGTCCATGTTACTAAAGATGTCGATGAGATAGAAAACGATGCTGGATGGTTAGGGATAATCGACCCGTGGAATTGCCAAAAAATTTTATGTGAGGCTAACCCTTTATTAAATAGTATAGTCTTGCCTAGAAACAAATTTGTACTCTACCCTCATTTTATGTCCTTGAGGAATTGTAAGTTTCTTCGACAAATTCTAAACCTTTCTCAGCATATGAAAAAAATGGATGTCAGTGGTTGTGAATCGTTGGTTACCTATGTTAAATTTAGAGTGGATGGAGATTCATATCAAAGGGAAGCCTTAATTTCATATAGAAAGAACATGACTACCTATAGTGGATGGAGATTCATATCAAGGGGAAGCCTTAATTTCATGTGGTTAGTAACAACTTCTTCTCCAACATTTAGTAGCTCCTTAGTGGCGAATGATTGGAATAGTGTTATAGTCTGGTTTGAAGTTGTGAAACATCGTGAGGATAATATAACTATAAGAAGTTGTGGTGTCCATCTCACTGAGGTCCATGGGATATCCGAAAATGATGTTAAGGGGCCAGGGGTAATATATACAGATTTTGATGACTCAGAGGAATTGTCAAGCCGGGATGTTATCAAATCCTTCGCTCAAGAAGTCTCCACCATATCATATTGCAATGCAATGTTGCATGTAGTGAATTTAGCAGTTGAAGCTGATTCTTAA

Protein sequence

MNITNSLIKCCRKTYPLVHLHVPITLRRYEIQNFPQRFQEMDATGCGLLSRSPIKINQTFLLINGEILKRFNYRTILNPVKVRFRYYLNMERTLTTYALFKVDEMEKQPYLGQTIISFNICYVWFDVLEFFVVNVTIKNCGVHVTKDVDEIENDAGWLGIIDPWNCQKILCEANPLLNSIVLPRNKFVLYPHFMSLRNCKFLRQILNLSQHMKKMDVSGCESLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLTEVHGISENDVKGPGVIYTDFDDSEELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS
Homology
[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: A0A0A0LLK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020890 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.4e-34
Identity = 89/157 (56.69%), Postives = 104/157 (66.24%), Query Frame = 1 

Query: 223  LVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFIS-------RGSLNFMWLVTTSSPTF 282
            L TY   +V GDSYQ  AL+S +     + G+R  S         +  + WLVTTSSPTF
Sbjct: 1106 LATYATLQVVGDSYQGMALVSCK----IFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPTF 1165

Query: 283  SSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLT-EVHGISENDVKGPGVIYTDFDDS 342
            S+SL  N+WN V VWFEVVK  E  +TI+ CGVHLT EVHGI +NDVKGPGV+YT FD  
Sbjct: 1166 STSLEMNEWNHVTVWFEVVKCSEATVTIKCCGVHLTEEVHGI-QNDVKGPGVVYTVFDQL 1225

Query: 343  EELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS 372
            ++L SRDVIKSF QEVS  S CNAMLH  N  V  DS
Sbjct: 1226 DKLPSRDVIKSFGQEVSAKSDCNAMLHAENFPVWNDS 1257

[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: A0A0A0LJM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022270 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-14
Identity = 64/156 (41.03%), Postives = 83/156 (53.21%), Query Frame = 1 

Query: 222  SLVTYVKFRVDGDSYQREALIS---YRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSS 281
            +L   V F+V+G+S +R A IS   +  N   +S  R        +MWLVTTS      S
Sbjct: 1008 TLAACVSFKVNGNSSERGARISCNIFVCNRLYFSLSRPFLPSKSEYMWLVTTSLAL--GS 1067

Query: 282  LVANDWNSVIVWFEVVK-HREDNITIRSCGVHLTEVHGISENDVKGPGVIYTDFDDSEEL 341
            +  NDWN V+VWFEV + H E N TI   GVH+TE     + DVK P V Y DF   E+L
Sbjct: 1068 MEVNDWNKVLVWFEVHEAHSEVNATITRYGVHVTEELHAIQTDVKWPMVNYADFYQLEKL 1127

Query: 342  SSRDV----IKSFAQEVSTISYCNAMLHVVNLAVEA 370
             S D+    +K F +E+S  S   AML+  N   EA
Sbjct: 1128 QSLDIEELLLKRFFEEMSCWSNSQAMLYAANYDPEA 1161

[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: E5GB36_CUCME (TIR-LRR-NBS disease resistance protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.4e-13
Identity = 58/144 (40.28%), Postives = 78/144 (54.17%), Query Frame = 1 

Query: 222 SLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVA 281
           +L   V F+V+GDS +R +   +  N    S  R        +MWLVTTS      SL A
Sbjct: 840 TLAACVSFKVNGDSSRRISCNIFICNRFHCSFSRPFLPSKSEYMWLVTTSLAW--GSLDA 899

Query: 282 NDWNSVIVWFEVVKHREDNITIRSCGVHLTEVHGISENDVKGPGVIYTDFDDSEELSSRD 341
            DWN V+V FEV    E N++IRS GVH+TE    ++ DVK P V Y DF   E+L + D
Sbjct: 900 QDWNKVVVLFEV--DDEVNLSIRSYGVHVTEEFNGTQTDVKWPVVNYGDFYQPEKLQNLD 959

Query: 342 V----IKSFAQEVSTISYCNAMLH 362
           +    +K    E+S +S C A+LH
Sbjct: 960 IEDILVKRLFDELSYLSNCKAVLH 979

[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: E7CHD3_CUCSA (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.6e-13
Identity = 59/153 (38.56%), Postives = 76/153 (49.67%), Query Frame = 1 

Query: 222 SLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVA 281
           +L   V F+V+G+S +RE                        +MWLVTTS      S+  
Sbjct: 688 TLAACVSFKVNGNSSERE------------------------YMWLVTTSLAL--GSMEV 747

Query: 282 NDWNSVIVWFEVVK-HREDNITIRSCGVHLTEVHGISENDVKGPGVIYTDFDDSEELSSR 341
           NDWN V+VWFEV + H E N TI   GVH+TE     + DVK P V Y DF   E+L S 
Sbjct: 748 NDWNKVLVWFEVHEAHSEVNATITRYGVHVTEELHAIQTDVKWPMVNYADFYQLEKLQSL 807

Query: 342 DV----IKSFAQEVSTISYCNAMLHVVNLAVEA 370
           D+    +K F +E+S  S   AML+  N   EA
Sbjct: 808 DIEELLLKRFFEEMSCWSNSQAMLYAANYDPEA 814

[Close]
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match: A0A0A0LIP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022780 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11
Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 1 

Query: 222 SLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVA 281
           +L   V F V+GDS +R +   +  N    S  R        ++WLV+TS      S+  
Sbjct: 319 TLAACVSFTVNGDSSERISCNIFICNRLHCSFSRSFLPSKSEYVWLVSTSLAW--GSMEV 378

Query: 282 NDWNSVIVWFEVVKHREDNITIRSCGVHLTE-VHGISENDVKGPGVIYTDFDDSEELSS 340
           NDW  V+VWFEV  H E N +IR CGVH+TE +HGI + DVK P V Y DF   E+L +
Sbjct: 379 NDWKEVLVWFEV--HDEVNTSIRRCGVHVTEELHGIIQMDVKWPVVNYADFYQLEKLQN 433

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|659070453|ref|XP_008455171.1| (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 3.7e-34
Identity = 89/164 (54.27%), Postives = 110/164 (67.07%), Query Frame = 1 

Query: 216  DVSGCESLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFIS-------RGSLNFMWLV 275
            D++   +L TY  F+V GDS++  AL+S +     + G+R  S         +  + WLV
Sbjct: 1097 DLNMERTLATYATFQVVGDSHRGMALVSCK----IFIGYRLQSCFMRKFPSSTSEYTWLV 1156

Query: 276  TTSSPTFSSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLT-EVHGISENDVKGPGVI 335
            TTSSPTFS+SL  N+WN V VWFEVVK  E  +TI+ CGVHLT EVHGI +NDVKGPGVI
Sbjct: 1157 TTSSPTFSTSLEMNEWNHVTVWFEVVKCSEVTVTIKCCGVHLTEEVHGI-QNDVKGPGVI 1216

Query: 336  YTDFDDSEELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS 372
            YT FD  ++L SRDV+KSFAQEVS  S CNA+LH  N  V  DS
Sbjct: 1217 YTVFDQPDKLPSRDVVKSFAQEVSAKSDCNAILHAENFPVWNDS 1255

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|700205747|gb|KGN60866.1| (hypothetical protein Csa_2G020890 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 4.9e-34
Identity = 89/157 (56.69%), Postives = 104/157 (66.24%), Query Frame = 1 

Query: 223  LVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFIS-------RGSLNFMWLVTTSSPTF 282
            L TY   +V GDSYQ  AL+S +     + G+R  S         +  + WLVTTSSPTF
Sbjct: 1106 LATYATLQVVGDSYQGMALVSCK----IFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPTF 1165

Query: 283  SSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLT-EVHGISENDVKGPGVIYTDFDDS 342
            S+SL  N+WN V VWFEVVK  E  +TI+ CGVHLT EVHGI +NDVKGPGV+YT FD  
Sbjct: 1166 STSLEMNEWNHVTVWFEVVKCSEATVTIKCCGVHLTEEVHGI-QNDVKGPGVVYTVFDQL 1225

Query: 343  EELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS 372
            ++L SRDVIKSF QEVS  S CNAMLH  N  V  DS
Sbjct: 1226 DKLPSRDVIKSFGQEVSAKSDCNAMLHAENFPVWNDS 1257

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|778666709|ref|XP_011648797.1| (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 4.9e-34
Identity = 89/157 (56.69%), Postives = 104/157 (66.24%), Query Frame = 1 

Query: 223  LVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFIS-------RGSLNFMWLVTTSSPTF 282
            L TY   +V GDSYQ  AL+S +     + G+R  S         +  + WLVTTSSPTF
Sbjct: 1106 LATYATLQVVGDSYQGMALVSCK----IFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPTF 1165

Query: 283  SSSLVANDWNSVIVWFEVVKHREDNITIRSCGVHLT-EVHGISENDVKGPGVIYTDFDDS 342
            S+SL  N+WN V VWFEVVK  E  +TI+ CGVHLT EVHGI +NDVKGPGV+YT FD  
Sbjct: 1166 STSLEMNEWNHVTVWFEVVKCSEATVTIKCCGVHLTEEVHGI-QNDVKGPGVVYTVFDQL 1225

Query: 343  EELSSRDVIKSFAQEVSTISYCNAMLHVVNLAVEADS 372
            ++L SRDVIKSF QEVS  S CNAMLH  N  V  DS
Sbjct: 1226 DKLPSRDVIKSFGQEVSAKSDCNAMLHAENFPVWNDS 1257

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|778674008|ref|XP_011650108.1| (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 1.1e-17
Identity = 64/153 (41.83%), Postives = 87/153 (56.86%), Query Frame = 1 

Query: 222  SLVTYVKFRVDGDSYQREALISYRKNMTTYSGWRFISRGSLNFMWLVTTSSPTFSSSLVA 281
            +L   V F V+GDS +R +   +  N    S  R        ++WLV+TS      S+  
Sbjct: 891  TLAACVSFTVNGDSSERISCNIFICNRLHCSFSRSFLPSKSEYVWLVSTSLAW--GSMEV 950

Query: 282  NDWNSVIVWFEVVKHREDNITIRSCGVHLTE-VHGISENDVKGPGVIYTDFDDSEELSSR 341
            NDW  V+VWFEV  H E N +IR CGVH+TE +HGI + DVK P V Y DF   E+L + 
Sbjct: 951  NDWKEVLVWFEV--HDEVNTSIRRCGVHVTEELHGIIQMDVKWPVVNYADFYQLEKLQNL 1010

Query: 342  DV----IKSFAQEVSTISYCNAMLHVVNLAVEA 370
            D+    +K F +E+S++S C AMLH  + A EA
Sbjct: 1011 DIEDLLVKRFFEEMSSLSNCKAMLHAGSYAPEA 1039

[Close]
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match: gi|659070449|ref|XP_008455151.1| (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-15
Identity = 71/160 (44.38%), Postives = 90/160 (56.25%), Query Frame = 1 

Query: 222  SLVTYVKFRVDGDSYQREALISYR-----KNMTTYSGWRFISRGSLNFMWLVTTSSPTFS 281
            +L   V F+V+GDS +R A IS       K  +++S  R        +MWLVTTS     
Sbjct: 1073 TLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFS--RPFLPSKSEYMWLVTTSLAW-- 1132

Query: 282  SSLVANDWNSVIVWFEVVK-HREDNITIRSCGVHLTE-VHGISENDVKGPGVIYTDFDDS 341
             S+  NDWN V+VWFEV + H E N TI  CGVH+TE +HGI + DVK P V Y DF   
Sbjct: 1133 GSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGI-QMDVKWPMVNYADFYQL 1192

Query: 342  EELSSRDV----IKSFAQEVSTISYCN-AMLHVVNLAVEA 370
            E+L S D+    +KSF + VS +S    AMLH  N   EA
Sbjct: 1193 EKLQSLDIEDLLLKSFLETVSCLSNSKAAMLHAGNYDPEA 1227

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g07360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g07360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLK3_CUCSA3.4e-3456.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020890 PE=4 SV=1[more]
A0A0A0LJM0_CUCSA1.3e-1441.03Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022270 PE=4 SV=1[more]
E5GB36_CUCME7.4e-1340.28TIR-LRR-NBS disease resistance protein (Fragment) OS=Cucumis melo subsp. melo PE... [more]
E7CHD3_CUCSA9.6e-1338.56Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1[more]
A0A0A0LIP1_CUCSA1.8e-1142.02Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022780 PE=4 SV=1[more]
BLAST of Cp4.1LG11g07360 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g07360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070453|ref|XP_008455171.1|3.7e-3454.27PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo][more]
gi|700205747|gb|KGN60866.1|4.9e-3456.69hypothetical protein Csa_2G020890 [Cucumis sativus][more]
gi|778666709|ref|XP_011648797.1|4.9e-3456.69PREDICTED: TMV resistance protein N-like [Cucumis sativus][more]
gi|778674008|ref|XP_011650108.1|1.1e-1741.83PREDICTED: TMV resistance protein N-like [Cucumis sativus][more]
gi|659070449|ref|XP_008455151.1|1.7e-1544.38PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0032559 adenyl ribonucleotide binding
molecular_function GO:0043168 anion binding
molecular_function GO:0032550 purine ribonucleoside binding
molecular_function GO:0043531 ADP binding
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07360.1Cp4.1LG11g07360.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g07360CmaCh05G009290Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g07360CmoCh05G009110Cucurbita moschata (Rifu)cmocpeB726
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g07360Cucumber (Chinese Long) v3cpecucB0135
Cp4.1LG11g07360Cucurbita pepo (Zucchini)cpecpeB149
Cp4.1LG11g07360Cucumber (Gy14) v1cgycpeB0088
Cp4.1LG11g07360Cucurbita maxima (Rimu)cmacpeB181
Cp4.1LG11g07360Cucurbita moschata (Rifu)cmocpeB155
Cp4.1LG11g07360Cucurbita moschata (Rifu)cmocpeB721
Cp4.1LG11g07360Wild cucumber (PI 183967)cpecpiB119
Cp4.1LG11g07360Cucumber (Chinese Long) v2cpecuB121
Cp4.1LG11g07360Bottle gourd (USVL1VR-Ls)cpelsiB099
Cp4.1LG11g07360Watermelon (Charleston Gray)cpewcgB123
Cp4.1LG11g07360Watermelon (97103) v1cpewmB100
Cp4.1LG11g07360Melon (DHL92) v3.5.1cpemeB090
Cp4.1LG11g07360Cucumber (Gy14) v2cgybcpeB717
Cp4.1LG11g07360Melon (DHL92) v3.6.1cpemedB113
Cp4.1LG11g07360Silver-seed gourdcarcpeB0191