Cp4.1LG11g06470 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g06470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Glutaredoxin
Location	Cp4.1LG11 : 4541696 .. 4543151 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCTCTTGCCACATTTCAACTACTACTGCCCCCATTTCCCTCCTCCTCCTCCTCTTCGTCTACCAAACCAACCTCTTTTCTTTGTCTTCTCCCCCTCCCCACTTCGCCTCTACAGCGCCGCGCCCACCTTAATCGGAATTCGCAACATTTCCATGGAATTCCACTCGAACACAGATCGAAATCTGGGCGGAAGTTCGGATCCTTCCGCTGCTTCTCGGGTAATTTCTTATTTTGTCCCTTTTTTCATTTTGTGCTCCGATTGTTCCTCTTCAGTAGGTATTGCAGTTTTTAGGGCTTGTTTATTTATATTGATTGCTGTTATCTGATGGAGGTTTGTGACGAAGATGCAGAGTTGACTTTGTGAAATTATGTCTGTTGTTCTGAATTGGATTAGTTTGGAACCGGTTTTTATTAAGAGTGTTGATTGAATTGGTTACTTTTTAGGGGAGGATATTGATGGAGATTAAGGGGAAGAAATTCAGTTCTCGTACCTTATGAATTGGGTTTTAGAGCTTGTGAGGATNACAATGTGCTAGTGCGGAGGCTGAGCCCCGAAGGGGGATAGATACAAGGCGGTGTGCTAGCAAGGATGCTGGGTCCCAAAGGGGAGTGGATTGGGGGGTCCCACATCGATTGTAGAAGGGAACGAGTGCTAGCAAGGATGCTGGGCCTCTAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGTAACATCCATTTTTTTTGTTCCTACAATTTTTTTTTTTTTTTTTTTGCTAGTGGTGGGCTTGGGCGGTTACAGGCAAAATGCACCCCGCCTTTTGTTCCTACATTTTTTTTTTTTTTTTGTTAATGCCCTTGTTATATTCTTTTATTTTCTCTAGAATGGGTTTTCCATCTTCTAAAAAAGATCATCCATTGGCATCGTACAAATTTCATGAGGATTTTTAGACGTTCGAATGCTATTTCATCTTTGAAAACATGAAAACATAATGCTGTTTTCTGTATGGCAGCATTATCTCCCGAGCTGAAAACAACAATCGACAAAGTCGTTACGTCGGAGAAAGTCGTTCTGTTTATGAAGGGATCAAAAGACTTCCCACAATGTGGATTCTCTCATACAGTAGTACAAATATTGAAGTCTTTAAATGTGCCCTTCGAGACTATAAACATTCTAGAGAACGAACTATTAAGACAAGGACTGAAGGAGTATTCAAGCTGGCCAACCTTTCCTCAGCTGTATATCGATGGAGAGTTCTTTGGTGGTTGTGACATAACAGTTGGTAAGTTTATGAACACATCCAAGGCTGGATACATTGATATTATCAACAATGAGTATTGAAAACTCTTATTTGAAAAATGAAATACTTAGTTTATTAGTTAAAAAGAGTTCCCATTTCTTGGTTACAGAAGCATACAAAAGTGGAGAATTGCTAGAAGCGTTGGAGAAGGCCATGTGTTCTTGA

mRNA sequence

ATGTCGTCTCTTGCCACATTTCAACTACTACTGCCCCCATTTCCCTCCTCCTCCTCCTCTTCGTCTACCAAACCAACCTCTTTTCTTTGTCTTCTCCCCCTCCCCACTTCGCCTCTACAGCGCCGCGCCCACCTTAATCGGAATTCGCAACATTTCCATGGAATTCCACTCGAACACAGATCGAAATCTGGGCGGAAGTTCGGATCCTTCCGCTGCTTCTCGGGTAATTTCTTATTTTGTCCCTTTTTTCATTTTGTGCTCCGATTGTTCCTCTTCACATTATCTCCCGAGCTGAAAACAACAATCGACAAAGTCGTTACGTCGGAGAAAGTCGTTCTGTTTATGAAGGGATCAAAAGACTTCCCACAATGTGGATTCTCTCATACAGTAGTACAAATATTGAAGTCTTTAAATGTGCCCTTCGAGACTATAAACATTCTAGAGAACGAACTATTAAGACAAGGACTGAAGGAGTATTCAAGCTGGCCAACCTTTCCTCAGCTGTATATCGATGGAGAGTTCTTTGGTGGTTGTGACATAACAGTTGTTAAAAAGAGTTCCCATTTCTTGGTTACAGAAGCATACAAAAGTGGAGAATTGCTAGAAGCGTTGGAGAAGGCCATGTGTTCTTGA

Coding sequence (CDS)

ATGTCGTCTCTTGCCACATTTCAACTACTACTGCCCCCATTTCCCTCCTCCTCCTCCTCTTCGTCTACCAAACCAACCTCTTTTCTTTGTCTTCTCCCCCTCCCCACTTCGCCTCTACAGCGCCGCGCCCACCTTAATCGGAATTCGCAACATTTCCATGGAATTCCACTCGAACACAGATCGAAATCTGGGCGGAAGTTCGGATCCTTCCGCTGCTTCTCGGGTAATTTCTTATTTTGTCCCTTTTTTCATTTTGTGCTCCGATTGTTCCTCTTCACATTATCTCCCGAGCTGAAAACAACAATCGACAAAGTCGTTACGTCGGAGAAAGTCGTTCTGTTTATGAAGGGATCAAAAGACTTCCCACAATGTGGATTCTCTCATACAGTAGTACAAATATTGAAGTCTTTAAATGTGCCCTTCGAGACTATAAACATTCTAGAGAACGAACTATTAAGACAAGGACTGAAGGAGTATTCAAGCTGGCCAACCTTTCCTCAGCTGTATATCGATGGAGAGTTCTTTGGTGGTTGTGACATAACAGTTGTTAAAAAGAGTTCCCATTTCTTGGTTACAGAAGCATACAAAAGTGGAGAATTGCTAGAAGCGTTGGAGAAGGCCATGTGTTCTTGA

Protein sequence

MSSLATFQLLLPPFPSSSSSSSTKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHRSKSGRKFGSFRCFSGNFLFCPFFHFVLRLFLFTLSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS

Homology

[Close]

BLAST of Cp4.1LG11g06470 vs. Swiss-Prot
Match: GRXS7_ORYSJ (Monothiol glutaredoxin-S7, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXS7 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44
Identity = 88/117 (75.21%), Postives = 99/117 (84.62%), Query Frame = 1


Query: 94  LSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLR 153
           L+PE++ T+DKVV S KVVLFMKG+KDFPQCGFSHTVVQIL+SL+VPFET+++L NE LR
Sbjct: 62  LAPEMRATLDKVVGSHKVVLFMKGTKDFPQCGFSHTVVQILRSLDVPFETLDVLANEALR 121

Query: 154 QGLKEYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           QGLKEYSSWPTFPQLYIDGEFFGGCDITV          +AYKSGEL E LEKAM S
Sbjct: 122 QGLKEYSSWPTFPQLYIDGEFFGGCDITV----------DAYKSGELQETLEKAMLS 168

[Close]

BLAST of Cp4.1LG11g06470 vs. Swiss-Prot
Match: GRS14_ARATH (Monothiol glutaredoxin-S14, chloroplastic OS=Arabidopsis thaliana GN=GRXS14 PE=1 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-43
Identity = 84/117 (71.79%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 94  LSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLR 153
           L+P+LK T++K+V SEKVVLFMKG++DFP CGFS+TVVQILK+LNVPFE +NILENE+LR
Sbjct: 67  LTPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILENEMLR 126

Query: 154 QGLKEYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           QGLKEYS+WPTFPQLYI GEFFGGCDIT+          EA+K+GEL E +EKAMCS
Sbjct: 127 QGLKEYSNWPTFPQLYIGGEFFGGCDITL----------EAFKTGELQEEVEKAMCS 173

[Close]

BLAST of Cp4.1LG11g06470 vs. Swiss-Prot
Match: YC64L_SYNY3 (Uncharacterized monothiol glutaredoxin ycf64-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1846 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 61/117 (52.14%), Postives = 85/117 (72.65%), Query Frame = 1


Query: 94  LSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLR 153
           ++PE K  ID++VT+ KV++FMKG+K  PQCGFS+ VVQIL  L +PFET+++L +  +R
Sbjct: 1   MNPETKARIDQLVTANKVMVFMKGTKLMPQCGFSNNVVQILNMLGIPFETLDVLADAEIR 60

Query: 154 QGLKEYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           QG+KEYS+WPT PQ+Y++GEF GG DI +          E Y++GEL E LE A+ S
Sbjct: 61  QGIKEYSNWPTIPQVYVNGEFVGGSDIMI----------ELYQNGELQEMLEVALAS 107

[Close]

BLAST of Cp4.1LG11g06470 vs. Swiss-Prot
Match: YCF64_PORPU (Uncharacterized monothiol glutaredoxin ycf64 OS=Porphyra purpurea GN=ycf64 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.9e-24
Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = 1


Query: 97  ELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGL 156
           E K  I++++ + K+VLFMKGSK  P CGFS+T +QIL +LN  + T +ILENE +RQ +
Sbjct: 4   ETKKVIEQILDNNKIVLFMKGSKLMPMCGFSNTAIQILNTLNTDYFTYDILENENIRQAI 63

Query: 157 KEYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           KE+SSWPT PQLYI+ EF GG DI          + E ++ GEL   +E  + +
Sbjct: 64  KEHSSWPTIPQLYINREFVGGADI----------MLELFEQGELQAQVETLLAA 107

[Close]

BLAST of Cp4.1LG11g06470 vs. Swiss-Prot
Match: YCF64_PYRYE (Uncharacterized monothiol glutaredoxin ycf64 OS=Pyropia yezoensis GN=ycf64 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.9e-24
Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1


Query: 94  LSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLR 153
           +  E K  ID+++   K+VLFMKG+K  P CGFS+T  QIL +LN+ + T +ILE+E +R
Sbjct: 1   MDTETKKRIDQLLNDHKIVLFMKGNKTMPMCGFSNTATQILNTLNIKYFTYDILEDENIR 60

Query: 154 QGLKEYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           + +KEYSSWPT PQLYI+ EF GG DI          + E +++GEL   +E  + +
Sbjct: 61  KAIKEYSSWPTIPQLYINREFIGGADI----------MLELFETGELQAQVEALLAT 107

[Close]

BLAST of Cp4.1LG11g06470 vs. TrEMBL
Match: A0A0A0LMN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074080 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-68
Identity = 152/211 (72.04%), Postives = 155/211 (73.46%), Query Frame = 1


Query: 1   MSSLATFQLLLPPFPSSSSSSSTKPTSFLCLLPLPTSPLQRRAH-LNRNSQHFHGIPLEH 60
           MSS+ TFQLLLP FPSSSSSS T     L  LP PTSPLQR AH LN + QH H I    
Sbjct: 1   MSSVGTFQLLLPAFPSSSSSSFTNKALSLRPLPFPTSPLQRHAHHLNHSLQHLHPI---- 60

Query: 61  RSKSGRKFGSFRCFSGNFLFCPFFHFVLRLFLFTLSPELKTTIDKVVTSEKVVLFMKGSK 120
            SKSGR F SFRC SG                  LSPELKTTIDKV+TSEKVVLFMKGSK
Sbjct: 61  -SKSGRNFRSFRCLSG------------------LSPELKTTIDKVITSEKVVLFMKGSK 120

Query: 121 DFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCD 180
           DFPQCGFSHTVVQILKSLNV FETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCD
Sbjct: 121 DFPQCGFSHTVVQILKSLNVHFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCD 178

Query: 181 ITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           ITV          EAYKSGEL E LEKAMCS
Sbjct: 181 ITV----------EAYKSGELQEVLEKAMCS 178

[Close]

BLAST of Cp4.1LG11g06470 vs. TrEMBL
Match: A0A022QVE9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014731mg PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.3e-50
Identity = 122/212 (57.55%), Postives = 137/212 (64.62%), Query Frame = 1


Query: 4   LATFQLLLPPFPSSSSSSSTKPTSFLCLLPLPTSPLQRRAHLNRNSQH---FHGIPLEHR 63
           +A F+      PS+ S  S   T+ L      T   Q + H N NS +   FHG+     
Sbjct: 1   MAAFRWQFAACPSTLSDYSPVSTATLAW----TRRRQNQGHRNCNSANIKTFHGLSYSGG 60

Query: 64  SKS--GRKFGSFRCFSGNFLFCPFFHFVLRLFLFTLSPELKTTIDKVVTSEKVVLFMKGS 123
           S +  GR   S RCFS                   L+PELKTT+DKVVTS+KVV+FMKG+
Sbjct: 61  SSTCGGRNRSSVRCFSA------------------LTPELKTTLDKVVTSDKVVVFMKGT 120

Query: 124 KDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGC 183
           KDFPQCGFS+TVVQILKSLNVPFETINILENELLR GLKEYSSWPTFPQ+YIDGEFFGGC
Sbjct: 121 KDFPQCGFSNTVVQILKSLNVPFETINILENELLRLGLKEYSSWPTFPQIYIDGEFFGGC 180

Query: 184 DITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           DITV          EAYKSGEL E LEKAMCS
Sbjct: 181 DITV----------EAYKSGELQEVLEKAMCS 180

[Close]

BLAST of Cp4.1LG11g06470 vs. TrEMBL
Match: W9SVF9_9ROSA (Monothiol glutaredoxin-S7 OS=Morus notabilis GN=L484_015107 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.2e-48
Identity = 113/160 (70.62%), Postives = 120/160 (75.00%), Query Frame = 1


Query: 56  PLEHRSKSGRKFGS-FRCFSGN-FLFCPFF--HFVLRLFLFT-LSPELKTTIDKVVTSEK 115
           PL  R+ +G   GS   C   N F F P    H       F+ LSPELKTT+DKVVTS K
Sbjct: 35  PLHLRNSTGPLPGSSLICTLPNAFFFTPKLPSHRTTSFCCFSVLSPELKTTLDKVVTSHK 94

Query: 116 VVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYI 175
           VVLFMKG+KDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYI
Sbjct: 95  VVLFMKGTKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYI 154

Query: 176 DGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           DGEFFGGCDITV          +AY+SGEL E LEKAMCS
Sbjct: 155 DGEFFGGCDITV----------DAYESGELQELLEKAMCS 184

[Close]

BLAST of Cp4.1LG11g06470 vs. TrEMBL
Match: A0A0J8C6H1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g146220 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.8e-47
Identity = 121/213 (56.81%), Postives = 137/213 (64.32%), Query Frame = 1


Query: 1   MSSLATFQLLLPPFPSSSSSSSTKPTSFLCLLPLPT---SPLQRRAHLNRNSQHFHGIPL 60
           + S  T  L LP F      S  K T ++  L  PT   SP    ++   +SQ+ H + L
Sbjct: 5   VGSTHTHTLPLPIF------SPEKITPYI-KLGCPTFSFSPFSSLSYRLFSSQNTHALNL 64

Query: 61  EHRSKSGRKFGSFRCFSGNFLFCPFFHFVLRLFLFTLSPELKTTIDKVVTSEKVVLFMKG 120
             R +S      FRCFS                   LSP+LKTTIDKVVTS+KVVLFMKG
Sbjct: 65  I-RPRSRTLSSPFRCFSA------------------LSPQLKTTIDKVVTSDKVVLFMKG 124

Query: 121 SKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGG 180
           ++DFPQCGFS+TVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGG
Sbjct: 125 TRDFPQCGFSNTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGG 181

Query: 181 CDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           CDI          + +A KSGEL E LEKAMCS
Sbjct: 185 CDI----------IVDALKSGELQETLEKAMCS 181

[Close]

BLAST of Cp4.1LG11g06470 vs. TrEMBL
Match: M0T754_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.8e-47
Identity = 102/155 (65.81%), Postives = 114/155 (73.55%), Query Frame = 1


Query: 56  PLEHRSKSGRKFGSFRCFSGNFLFCPFFHFVLRLFLFTLSPELKTTIDKVVTSEKVVLFM 115
           PL  RSKS     S RCFS                   LSPE+K+TIDKVV S KVVLFM
Sbjct: 48  PLRFRSKSPGTSLSARCFSA------------------LSPEMKSTIDKVVQSHKVVLFM 107

Query: 116 KGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFF 175
           KG+KDFPQCGFS+TVVQILKSLNVPFET+NILEN++LRQG+KEYSSWPTFPQLYIDGEFF
Sbjct: 108 KGTKDFPQCGFSNTVVQILKSLNVPFETLNILENDMLRQGMKEYSSWPTFPQLYIDGEFF 167

Query: 176 GGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           GGCDIT+          EAYK+G+L E +EKAMCS
Sbjct: 168 GGCDITI----------EAYKNGQLQEQIEKAMCS 174

[Close]

BLAST of Cp4.1LG11g06470 vs. TAIR10
Match: AT3G54900.1 (AT3G54900.1 CAX interacting protein 1)

HSP 1 Score: 177.6 bits (449), Expect = 8.2e-45
Identity = 84/117 (71.79%), Postives = 100/117 (85.47%), Query Frame = 1


Query: 94  LSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLR 153
           L+P+LK T++K+V SEKVVLFMKG++DFP CGFS+TVVQILK+LNVPFE +NILENE+LR
Sbjct: 67  LTPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILENEMLR 126

Query: 154 QGLKEYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           QGLKEYS+WPTFPQLYI GEFFGGCDIT+          EA+K+GEL E +EKAMCS
Sbjct: 127 QGLKEYSNWPTFPQLYIGGEFFGGCDITL----------EAFKTGELQEEVEKAMCS 173

[Close]

BLAST of Cp4.1LG11g06470 vs. TAIR10
Match: AT2G38270.1 (AT2G38270.1 CAX-interacting protein 2)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23
Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = 1


Query: 94  LSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENEL-- 153
           L+  L+  ID++V   KVV F+KGS+  PQCGFS  VV IL+S  V +ET+++L++E   
Sbjct: 189 LTVPLEELIDRLVKESKVVAFIKGSRSAPQCGFSQRVVGILESQGVDYETVDVLDDEYNH 248

Query: 154 -LRQGLKEYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEAL 205
            LR+ LK YS+WPTFPQ+++ GE  GGCDI          +T  Y++GEL   L
Sbjct: 249 GLRETLKNYSNWPTFPQIFVKGELVGGCDI----------LTSMYENGELANIL 292

[Close]

BLAST of Cp4.1LG11g06470 vs. TAIR10
Match: AT4G04950.1 (AT4G04950.1 thioredoxin family protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-22
Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 1


Query: 98  LKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLK 157
           LK+ ++K+  S  V+LFMKG  + P+CGFS  VV ILK +NV F + +IL +  +R+GLK
Sbjct: 153 LKSRLEKLTNSHPVMLFMKGIPEEPRCGFSRKVVDILKEVNVDFGSFDILSDNEVREGLK 212

Query: 158 EYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALE 206
           ++S+WPTFPQLY +GE  GG DI +            ++SGEL +A +
Sbjct: 213 KFSNWPTFPQLYCNGELLGGADIAIA----------MHESGELKDAFK 250

[Close]

BLAST of Cp4.1LG11g06470 vs. TAIR10
Match: AT3G15660.1 (AT3G15660.1 glutaredoxin 4)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-19
Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 1


Query: 98  LKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLK 157
           LK  ++  V    V+++MKG  + PQCGFS   V++L+  NVP  + NILE++ L+  +K
Sbjct: 65  LKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYNVPISSRNILEDQELKNAVK 124

Query: 158 EYSSWPTFPQLYIDGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALE 206
            +S WPTFPQ++I GEF GG DI          +   +K GEL + L+
Sbjct: 125 SFSHWPTFPQIFIKGEFIGGSDI----------ILNMHKEGELEQKLK 162

[Close]

BLAST of Cp4.1LG11g06470 vs. NCBI nr
Match: gi|659082491|ref|XP_008441868.1| (PREDICTED: monothiol glutaredoxin-S14, chloroplastic [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 7.0e-70
Identity = 153/211 (72.51%), Postives = 157/211 (74.41%), Query Frame = 1


Query: 1   MSSLATFQLLLPPFPSSSSSSSTKPTSFLCLLPLPTSPLQRRAH-LNRNSQHFHGIPLEH 60
           MSS+ TFQLLLPPFPSSSSSS T  T  L  LP PTSP QR AH LN + QH H I    
Sbjct: 1   MSSVGTFQLLLPPFPSSSSSSFTNKTLSLRPLPFPTSPRQRHAHHLNHSLQHLHPI---- 60

Query: 61  RSKSGRKFGSFRCFSGNFLFCPFFHFVLRLFLFTLSPELKTTIDKVVTSEKVVLFMKGSK 120
            SKSGR FGSFRC SG                  LSPELKTTIDKV+TSEKVVLFMKGSK
Sbjct: 61  -SKSGRNFGSFRCLSG------------------LSPELKTTIDKVITSEKVVLFMKGSK 120

Query: 121 DFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCD 180
           DFPQCGFSHTVVQILKSLNV FETINILENELLRQGLKEYS+WPTFPQLYIDGEFFGGCD
Sbjct: 121 DFPQCGFSHTVVQILKSLNVHFETINILENELLRQGLKEYSNWPTFPQLYIDGEFFGGCD 178

Query: 181 ITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           ITV          EAYKSGEL E LEKAMCS
Sbjct: 181 ITV----------EAYKSGELQEVLEKAMCS 178

[Close]

BLAST of Cp4.1LG11g06470 vs. NCBI nr
Match: gi|449470257|ref|XP_004152834.1| (PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Cucumis sativus])

HSP 1 Score: 267.7 bits (683), Expect = 1.7e-68
Identity = 152/211 (72.04%), Postives = 155/211 (73.46%), Query Frame = 1


Query: 1   MSSLATFQLLLPPFPSSSSSSSTKPTSFLCLLPLPTSPLQRRAH-LNRNSQHFHGIPLEH 60
           MSS+ TFQLLLP FPSSSSSS T     L  LP PTSPLQR AH LN + QH H I    
Sbjct: 1   MSSVGTFQLLLPAFPSSSSSSFTNKALSLRPLPFPTSPLQRHAHHLNHSLQHLHPI---- 60

Query: 61  RSKSGRKFGSFRCFSGNFLFCPFFHFVLRLFLFTLSPELKTTIDKVVTSEKVVLFMKGSK 120
            SKSGR F SFRC SG                  LSPELKTTIDKV+TSEKVVLFMKGSK
Sbjct: 61  -SKSGRNFRSFRCLSG------------------LSPELKTTIDKVITSEKVVLFMKGSK 120

Query: 121 DFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCD 180
           DFPQCGFSHTVVQILKSLNV FETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCD
Sbjct: 121 DFPQCGFSHTVVQILKSLNVHFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCD 178

Query: 181 ITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           ITV          EAYKSGEL E LEKAMCS
Sbjct: 181 ITV----------EAYKSGELQEVLEKAMCS 178

[Close]

BLAST of Cp4.1LG11g06470 vs. NCBI nr
Match: gi|848887708|ref|XP_012844077.1| (PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Erythranthe guttata])

HSP 1 Score: 205.3 bits (521), Expect = 1.0e-49
Identity = 122/212 (57.55%), Postives = 137/212 (64.62%), Query Frame = 1


Query: 4   LATFQLLLPPFPSSSSSSSTKPTSFLCLLPLPTSPLQRRAHLNRNSQH---FHGIPLEHR 63
           +A F+      PS+ S  S   T+ L      T   Q + H N NS +   FHG+     
Sbjct: 1   MAAFRWQFAACPSTLSDYSPVSTATLAW----TRRRQNQGHRNCNSANIKTFHGLSYSGG 60

Query: 64  SKS--GRKFGSFRCFSGNFLFCPFFHFVLRLFLFTLSPELKTTIDKVVTSEKVVLFMKGS 123
           S +  GR   S RCFS                   L+PELKTT+DKVVTS+KVV+FMKG+
Sbjct: 61  SSTCGGRNRSSVRCFSA------------------LTPELKTTLDKVVTSDKVVVFMKGT 120

Query: 124 KDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGC 183
           KDFPQCGFS+TVVQILKSLNVPFETINILENELLR GLKEYSSWPTFPQ+YIDGEFFGGC
Sbjct: 121 KDFPQCGFSNTVVQILKSLNVPFETINILENELLRLGLKEYSSWPTFPQIYIDGEFFGGC 180

Query: 184 DITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           DITV          EAYKSGEL E LEKAMCS
Sbjct: 181 DITV----------EAYKSGELQEVLEKAMCS 180

[Close]

BLAST of Cp4.1LG11g06470 vs. NCBI nr
Match: gi|1009118117|ref|XP_015875688.1| (PREDICTED: uncharacterized monothiol glutaredoxin ycf64-like [Ziziphus jujuba])

HSP 1 Score: 201.4 bits (511), Expect = 1.5e-48
Identity = 123/216 (56.94%), Postives = 143/216 (66.20%), Query Frame = 1


Query: 1   MSSLATFQLLLPPFPSSSS------SSSTKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHG 60
           M  + + +L+  P  SSSS      ++  KPT+ L L P PT PL   + L+  S +   
Sbjct: 1   MVGVGSLELIRIPPTSSSSYVSGAVANQPKPTTALHL-PRPTRPLY--SPLSFTSPNAFI 60

Query: 61  IPLEHRSKSGRKFGSFRCFSGNFLFCPFFHFVLRLFLFTLSPELKTTIDKVVTSEKVVLF 120
              +H   S  +  S RCFS                   L+PELKTT+DKVVT++KVVLF
Sbjct: 61  FRTKH---SSMRTASLRCFSA------------------LTPELKTTLDKVVTAKKVVLF 120

Query: 121 MKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEF 180
           MKG+KDFPQCGFS+TVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYI+GEF
Sbjct: 121 MKGTKDFPQCGFSNTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIEGEF 180

Query: 181 FGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           FGGCDIT+          EAYKSGEL E LEKAMCS
Sbjct: 181 FGGCDITI----------EAYKSGELQELLEKAMCS 182

[Close]

BLAST of Cp4.1LG11g06470 vs. NCBI nr
Match: gi|703154861|ref|XP_010111052.1| (Monothiol glutaredoxin-S7 [Morus notabilis])

HSP 1 Score: 199.1 bits (505), Expect = 7.5e-48
Identity = 113/160 (70.62%), Postives = 120/160 (75.00%), Query Frame = 1


Query: 56  PLEHRSKSGRKFGS-FRCFSGN-FLFCPFF--HFVLRLFLFT-LSPELKTTIDKVVTSEK 115
           PL  R+ +G   GS   C   N F F P    H       F+ LSPELKTT+DKVVTS K
Sbjct: 35  PLHLRNSTGPLPGSSLICTLPNAFFFTPKLPSHRTTSFCCFSVLSPELKTTLDKVVTSHK 94

Query: 116 VVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYI 175
           VVLFMKG+KDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYI
Sbjct: 95  VVLFMKGTKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYI 154

Query: 176 DGEFFGGCDITVVKKSSHFLVTEAYKSGELLEALEKAMCS 211
           DGEFFGGCDITV          +AY+SGEL E LEKAMCS
Sbjct: 155 DGEFFGGCDITV----------DAYESGELQELLEKAMCS 184

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g06470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRXS7_ORYSJ	1.0e-44	75.21	Monothiol glutaredoxin-S7, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXS...	[more]
GRS14_ARATH	1.5e-43	71.79	Monothiol glutaredoxin-S14, chloroplastic OS=Arabidopsis thaliana GN=GRXS14 PE=1...	[more]
YC64L_SYNY3	1.2e-29	52.14	Uncharacterized monothiol glutaredoxin ycf64-like OS=Synechocystis sp. (strain P...	[more]
YCF64_PORPU	9.9e-24	47.37	Uncharacterized monothiol glutaredoxin ycf64 OS=Porphyra purpurea GN=ycf64 PE=3 ...	[more]
YCF64_PYRYE	9.9e-24	45.30	Uncharacterized monothiol glutaredoxin ycf64 OS=Pyropia yezoensis GN=ycf64 PE=3 ...	[more]

BLAST of Cp4.1LG11g06470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMN8_CUCSA	1.2e-68	72.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074080 PE=4 SV=1	[more]
A0A022QVE9_ERYGU	7.3e-50	57.55	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014731mg PE=4 SV=1	[more]
W9SVF9_9ROSA	5.2e-48	70.63	Monothiol glutaredoxin-S7 OS=Morus notabilis GN=L484_015107 PE=4 SV=1	[more]
A0A0J8C6H1_BETVU	5.8e-47	56.81	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g146220 PE=4 S...	[more]
M0T754_MUSAM	5.8e-47	65.81	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]

BLAST of Cp4.1LG11g06470 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54900.1	8.2e-45	71.79	CAX interacting protein 1	[more]
AT2G38270.1	2.3e-23	46.49	CAX-interacting protein 2	[more]
AT4G04950.1	3.4e-22	45.37	thioredoxin family protein	[more]
AT3G15660.1	2.0e-19	40.74	glutaredoxin 4	[more]

BLAST of Cp4.1LG11g06470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082491\|ref\|XP_008441868.1\|	7.0e-70	72.51	PREDICTED: monothiol glutaredoxin-S14, chloroplastic [Cucumis melo]	[more]
gi\|449470257\|ref\|XP_004152834.1\|	1.7e-68	72.04	PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Cucumis sativus]	[more]
gi\|848887708\|ref\|XP_012844077.1\|	1.0e-49	57.55	PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Erythranthe guttata]	[more]
gi\|1009118117\|ref\|XP_015875688.1\|	1.5e-48	56.94	PREDICTED: uncharacterized monothiol glutaredoxin ycf64-like [Ziziphus jujuba]	[more]
gi\|703154861\|ref\|XP_010111052.1\|	7.5e-48	70.63	Monothiol glutaredoxin-S7 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR004480	Monothiol_GRX-rel
IPR002109	Glutaredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0006812	cation transport
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0022900	electron transport chain
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005623	cell
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0015038	glutathione disulfide oxidoreductase activity
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g06470.1	Cp4.1LG11g06470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 111..174 score: 6.5
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 99..210 score: 24
IPR004480	Monothiol glutaredoxin-related	PANTHER	PTHR10293	GLUTAREDOXIN-RELATED PROTEIN	coord: 94..209 score: 1.7
IPR004480	Monothiol glutaredoxin-related	TIGRFAMs	TIGR00365	TIGR00365	coord: 100..183 score: 4.4
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 102..187 score: 1.6
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 97..206 score: 6.56
None	No IPR available	PANTHER	PTHR10293:SF37	MONOTHIOL GLUTAREDOXIN-S14, CHLOROPLASTIC	coord: 94..209 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g06470	Cucsa.178670	Cucumber (Gy14) v1	cgycpeB0491
Cp4.1LG11g06470	CmaCh05G007510	Cucurbita maxima (Rimu)	cmacpeB766
Cp4.1LG11g06470	CmoCh05G007920	Cucurbita moschata (Rifu)	cmocpeB720
Cp4.1LG11g06470	Csa2G074080	Cucumber (Chinese Long) v2	cpecuB098
Cp4.1LG11g06470	MELO3C008750	Melon (DHL92) v3.5.1	cpemeB102
Cp4.1LG11g06470	ClCG11G010980	Watermelon (Charleston Gray)	cpewcgB098
Cp4.1LG11g06470	CSPI02G07070	Wild cucumber (PI 183967)	cpecpiB094
Cp4.1LG11g06470	Lsi11G008500	Bottle gourd (USVL1VR-Ls)	cpelsiB070
Cp4.1LG11g06470	MELO3C008750.2	Melon (DHL92) v3.6.1	cpemedB127
Cp4.1LG11g06470	CsaV3_2G009510	Cucumber (Chinese Long) v3	cpecucB0108
Cp4.1LG11g06470	Bhi06G000997	Wax gourd	cpewgoB0127
Cp4.1LG11g06470	CsGy2G007280	Cucumber (Gy14) v2	cgybcpeB163
Cp4.1LG11g06470	Carg19834	Silver-seed gourd	carcpeB0237

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g06470	Cucurbita pepo (Zucchini)	cpecpeB142
Cp4.1LG11g06470	Cucurbita maxima (Rimu)	cmacpeB175
Cp4.1LG11g06470	Cucurbita moschata (Rifu)	cmocpeB149
Cp4.1LG11g06470	Silver-seed gourd	carcpeB0005