Carg19834 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19834
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glutaredoxin
Location	Cucurbita_argyrosperma_scaffold_067 : 403247 .. 406053 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGTTGGACGCAGAACGCTTGTTTGAACCTAGACAGCAACCTCTGTGGCTCTCTGCATCGGCAACCAAAATCCTCCGGAGTTCGAAGGAGAAAGAAGAAGATTGCGAACAAAAATGTCGTCTCTTGCCACATTTCAACTACTACTACCCCCATTTCCCTCCTCCTCCTCCTCTTCTTCTACCAAACCAACCTCTTTTCTTTGTCTTCTCCCCCTCCCCACTTCGCCTCTACAGCGCCGCGCCCACCTTAATCGGAATTCGCAACATTTTCATGGAATTCCACTCGAACACAGATCGAAATCTGGGCGGAAGTTTGGATCCTTCCGCTGCTTCTCGGGTAATTTCTTTATTTTGTCCCTTTCTTCATTTTGTGCTCCGATTGCTCCTCTTCAGTAGGTATTGCAGTTTTTAGGGCTTGTATATTTATATTGATTGCTGTTATCTGATGGAGGTTTGTGACAAAGATGCAGAGTTGACTTTGTGAAATTATGTCTGTTGTTCTGAATTGGATTAGTTTGGAACCGGTTTTTATTAGGAGTGTTGATTGAATTGGTTACTTTTTAGGGGGAGGATATTGATGGAGATTAAGGGGAAGAAATTCAGTTCTCGTGCCTTATGAATTGGGTTTTAGAGCTTGTGAGGATAGAGGTTGTGTTGCTAGTTTATCTTTGATGGATTCTGCTCTCCTAACTAAATGGATGTCATGCGTGCAAGAAGTAGGCATGGACTTTATTGGAGTGTGATTCAAATTTGATATTGTTGATACTTAAGTCTTTGGAACATTGTTTTTTAATATTAATTTCAGCCAAATGATGCTGATATTTGAAAACTTTGTTCGGTAAAAGTGAAATGCAATTGAAATAACCATGTCATTTTGAATCAAAATGGGTTGGCCTAGAAGTCAATTAGGACTATTGTAAATAATAAAGGGTCAATGGGTATGGTTACCAAGTTTTGTTGACAAACTCTACAATCAGTAGAGTTGAATAGATGTATTGTGAGAATAGTCAATGTGAGATCCCACATCGTTGGAGAGAGGATCGAAGCCTTCTTTATAAGGGTGTGTAAACCTTTCCCTAGCAAACACGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAGAGAGGACAATATCTGTTAGCGGCGGACTTAGGCTATTACCAATGGTATCAGAGCCAGACATTGGGCAATGTGCTAGTGCAGGCTAAGCCTCAAGGAGGATGGACACAAGGTGGTGTACCATCAAGGACGTTGGGCCCAGAAGGGTGGCGGATTGGGGGATCCCACATTGATTGGAGAAGGGAACGAGTGCCAGTAGGACGTTGGGTCTCGAAAGAGGGTGGATTGTGAGATCTCACATCGGTTGAAGAGGGGAACGAAACATTCTTTATAAGGGTGCGGAAACCTCTCCGTAGCAAATGCGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCCCAGAGAGGACAATATCTTCTAGCGATGAGCTTAGGCTATTATAAATTGCATCAGAGCTAGACACTGGGCAATGTGCTAGTGCGGAGGCTGAGTCTCAAAGGGGGATGGACACAATGCGGTGTGCCAGCAAGGGCGTTGGGCCTCGAAGGGGGTGGATTGGAGGGTCCCACATCGATTACAGAAAGGAACGAGTGTCAGCGAGGACGCTGCGCCTCGAAAAGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAACATCCATTTTTTCTGTTCCTACAAAAATTTTTTTTTTTTTTTTCTTAGCGATGGGCTTGGGCTGTTTCAGTCAAAATGCAGATACAGATCAGTTGCATGGACTACCTCTGATGTGACCTTTTGTTCCTACATTTTTTTTTGGGTAATGCCCTATTTATATTCTTTTATTTGCTCTAGAATGGGTTTTCCATCTTCTAAAAAAGATCATCCATTGGCATCGTACAAATTTCATGAGGATTTTTAGACGTTCGAATGCTATTTCATCTTTGAAAACATGAAAACATAATGCTGTTTTTTGTATGGCAGCATTATCTCCCGAGCTGAAAACAACAATCGACAAAGTCGTTACGTCGGAGAAAGTCGTTCTGTTTATGAAGGGATCAAAAGACTTCCCACAATGTGGATTCTCTCATACGGTAGTACAAATATTGAAGTCTTTAAATGTGCCCTTCGAGACTATAAACATTCTAGAGAACGAACTATTAAGACAAGGACTGAAGGAGTATTCAAGCTGGCCAACCTTTCCTCAGCTGTATATCGATGGAGAGTTCTTTGGTGGTTGTGACATAACAGTTGGTAAGTTTCTGAACACATCCAAGGCTGGATACAGTGATATTATCAACACTGAGTATTGAAAACCCTTATTTGAAAAATGAAATATTTAGTTTATTAGTTAAAAAGAGTTCCCATTTCTTGGTTACAGAAGCATACAAAAGTGGAGAATTGCTTGAAGTGTTGGAGAAGGCCATGTGTTCTTGAAGGCCGTTGAAAGGTAAGGTTTGGCAATGCTTCTTGACTTATTTTTTAGTGATGGAAATATGTATATCAATATGACATTTATGTTACTCAAGGCTTTATGACAAAAGTTAAGGTTTGTTTTAATGTTTACTTCTCAAATGGTTAACTAAGAAAGGGTTGAAAGGAAAAAGAAATGAAGTTTGAACTTTAAGAACCCAAGATTTTATTCATACACGATCCTCTAGTTTTAGTCCTCTTATCATCTGAATCCCGAAAGGTAGAGCATAGCCTTGGTCCTCTCATCATCTGTTTCTCGAAAGGCAGAACGTAAGAACATCAGA

mRNA sequence

GTTGTTGGACGCAGAACGCTTGTTTGAACCTAGACAGCAACCTCTGTGGCTCTCTGCATCGGCAACCAAAATCCTCCGGAGTTCGAAGGAGAAAGAAGAAGATTGCGAACAAAAATGTCGTCTCTTGCCACATTTCAACTACTACTACCCCCATTTCCCTCCTCCTCCTCCTCTTCTTCTACCAAACCAACCTCTTTTCTTTGTCTTCTCCCCCTCCCCACTTCGCCTCTACAGCGCCGCGCCCACCTTAATCGGAATTCGCAACATTTTCATGGAATTCCACTCGAACACAGATCGAAATCTGGGCGGAAGTTTGGATCCTTCCGCTGCTTCTCGGCATTATCTCCCGAGCTGAAAACAACAATCGACAAAGTCGTTACGTCGGAGAAAGTCGTTCTGTTTATGAAGGGATCAAAAGACTTCCCACAATGTGGATTCTCTCATACGGTAGTACAAATATTGAAGTCTTTAAATGTGCCCTTCGAGACTATAAACATTCTAGAGAACGAACTATTAAGACAAGGACTGAAGGAGTATTCAAGCTGGCCAACCTTTCCTCAGCTGTATATCGATGGAGAGTTCTTTGGTGGTTGTGACATAACAGTTGAAGCATACAAAAGTGGAGAATTGCTTGAAGTGTTGGAGAAGGCCATGTGTTCTTGAAGGCCGTTGAAAGGTAAGGTTTGGCAATGCTTCTTGACTTATTTTTTAGTGATGGAAATATGTATATCAATATGACATTTATGTTACTCAAGGCTTTATGACAAAAGTTAAGGTTTGTTTTAATGTTTACTTCTCAAATGGTTAACTAAGAAAGGGTTGAAAGGAAAAAGAAATGAAGTTTGAACTTTAAGAACCCAAGATTTTATTCATACACGATCCTCTAGTTTTAGTCCTCTTATCATCTGAATCCCGAAAGGTAGAGCATAGCCTTGGTCCTCTCATCATCTGTTTCTCGAAAGGCAGAACGTAAGAACATCAGA

Coding sequence (CDS)

ATGTCGTCTCTTGCCACATTTCAACTACTACTACCCCCATTTCCCTCCTCCTCCTCCTCTTCTTCTACCAAACCAACCTCTTTTCTTTGTCTTCTCCCCCTCCCCACTTCGCCTCTACAGCGCCGCGCCCACCTTAATCGGAATTCGCAACATTTTCATGGAATTCCACTCGAACACAGATCGAAATCTGGGCGGAAGTTTGGATCCTTCCGCTGCTTCTCGGCATTATCTCCCGAGCTGAAAACAACAATCGACAAAGTCGTTACGTCGGAGAAAGTCGTTCTGTTTATGAAGGGATCAAAAGACTTCCCACAATGTGGATTCTCTCATACGGTAGTACAAATATTGAAGTCTTTAAATGTGCCCTTCGAGACTATAAACATTCTAGAGAACGAACTATTAAGACAAGGACTGAAGGAGTATTCAAGCTGGCCAACCTTTCCTCAGCTGTATATCGATGGAGAGTTCTTTGGTGGTTGTGACATAACAGTTGAAGCATACAAAAGTGGAGAATTGCTTGAAGTGTTGGAGAAGGCCATGTGTTCTTGA

Protein sequence

MSSLATFQLLLPPFPSSSSSSSTKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHRSKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAMCS

Homology

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BLAST of Carg19834 vs. NCBI nr
Match: XP_023546801.1 (uncharacterized protein LOC111805800 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.6 bits (919), Expect = 1.2e-95
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHR 60
           MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHR
Sbjct: 1   MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHR 60

Query: 61  SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN 120
           SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN
Sbjct: 61  SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN 120

Query: 121 VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAM 180
           VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLE LEKAM
Sbjct: 121 VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEALEKAM 180

Query: 181 CS 183
           CS
Sbjct: 181 CS 182

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BLAST of Carg19834 vs. NCBI nr
Match: XP_023546803.1 (uncharacterized protein LOC111805803 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.1 bits (915), Expect = 3.6e-95
Identity = 175/182 (96.15%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHR 60
           MSSLATFQLLLPPFPSS     TKPTSFLCLLPLPTSPLQRR HLNRNSQHFHGIPLEHR
Sbjct: 1   MSSLATFQLLLPPFPSSSASSSTKPTSFLCLLPLPTSPLQRRVHLNRNSQHFHGIPLEHR 60

Query: 61  SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN 120
           SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN
Sbjct: 61  SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN 120

Query: 121 VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAM 180
           VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLE LEKAM
Sbjct: 121 VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEALEKAM 180

Query: 181 CS 183
           CS
Sbjct: 181 CS 182

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BLAST of Carg19834 vs. NCBI nr
Match: XP_022929664.1 (monothiol glutaredoxin-S7, chloroplastic [Cucurbita moschata])

HSP 1 Score: 356.3 bits (913), Expect = 6.2e-95
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHR 60
           MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPL TSPLQRRAHLNRNSQHFHGIPLEHR
Sbjct: 1   MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLLTSPLQRRAHLNRNSQHFHGIPLEHR 60

Query: 61  SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN 120
           SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN
Sbjct: 61  SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN 120

Query: 121 VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAM 180
           VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAM
Sbjct: 121 VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAM 180

Query: 181 CS 183
           CS
Sbjct: 181 CS 182

[Close]

BLAST of Carg19834 vs. NCBI nr
Match: XP_022997370.1 (uncharacterized protein LOC111492306 [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 2.1e-90
Identity = 174/182 (95.60%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHR 60
           MSSLATFQLLLPPFPS XXXXX      LCLLPLPTSPLQRRA+LNRNSQHFHGIPLEHR
Sbjct: 1   MSSLATFQLLLPPFPSXXXXXXXXXXXXLCLLPLPTSPLQRRAYLNRNSQHFHGIPLEHR 60

Query: 61  SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN 120
           SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN
Sbjct: 61  SKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLN 120

Query: 121 VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAM 180
           VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAM
Sbjct: 121 VPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAM 180

Query: 181 CS 183
           CS
Sbjct: 181 CS 182

[Close]

BLAST of Carg19834 vs. NCBI nr
Match: XP_008441869.1 (PREDICTED: uncharacterized monothiol glutaredoxin ycf64-like [Cucumis melo] >XP_008441870.1 PREDICTED: uncharacterized monothiol glutaredoxin ycf64-like [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 3.5e-74
Identity = 149/183 (81.42%), Postives = 153/183 (83.61%), Query Frame = 0


Query: 1   MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLPTSPLQRRA-HLNRNSQHFHGIPLEH 60
           MSS+ TFQLLLPPFPSS     T  T  L  LP PTSP QR A HLN + QH H I    
Sbjct: 1   MSSVGTFQLLLPPFPSSSSSSFTNKTLSLRPLPFPTSPRQRHAHHLNHSLQHLHPI---- 60

Query: 61  RSKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSL 120
            SKSGR FGSFRC S LSPELKTTIDKV+TSEKVVLFMKGSKDFPQCGFSHTVVQILKSL
Sbjct: 61  -SKSGRNFGSFRCLSGLSPELKTTIDKVITSEKVVLFMKGSKDFPQCGFSHTVVQILKSL 120

Query: 121 NVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKA 180
           NV FETINILENELLRQGLKEYS+WPTFPQLYIDGEFFGGCDITVEAYKSGEL EVLEKA
Sbjct: 121 NVHFETINILENELLRQGLKEYSNWPTFPQLYIDGEFFGGCDITVEAYKSGELQEVLEKA 178

Query: 181 MCS 183
           MCS
Sbjct: 181 MCS 178

[Close]

BLAST of Carg19834 vs. TAIR10
Match: AT3G54900.1 (CAX interacting protein 1)

HSP 1 Score: 192.2 bits (487), Expect = 2.8e-49
Identity = 89/114 (78.07%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 70  FRC-FSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINI 129
           FRC  SAL+P+LK T++K+V SEKVVLFMKG++DFP CGFS+TVVQILK+LNVPFE +NI
Sbjct: 60  FRCSASALTPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNI 119

Query: 130 LENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAMCS 183
           LENE+LRQGLKEYS+WPTFPQLYI GEFFGGCDIT+EA+K+GEL E +EKAMCS
Sbjct: 120 LENEMLRQGLKEYSNWPTFPQLYIGGEFFGGCDITLEAFKTGELQEEVEKAMCS 173

[Close]

BLAST of Carg19834 vs. TAIR10
Match: AT2G38270.1 (CAX-interacting protein 2)

HSP 1 Score: 114.0 bits (284), Expect = 9.7e-26
Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 76  LSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENEL-- 135
           L+  L+  ID++V   KVV F+KGS+  PQCGFS  VV IL+S  V +ET+++L++E   
Sbjct: 189 LTVPLEELIDRLVKESKVVAFIKGSRSAPQCGFSQRVVGILESQGVDYETVDVLDDEYNH 248

Query: 136 -LRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVL 177
            LR+ LK YS+WPTFPQ+++ GE  GGCDI    Y++GEL  +L
Sbjct: 249 GLRETLKNYSNWPTFPQIFVKGELVGGCDILTSMYENGELANIL 292

[Close]

BLAST of Carg19834 vs. TAIR10
Match: AT4G04950.1 (thioredoxin family protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 80  LKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLK 139
           LK+ ++K+  S  V+LFMKG  + P+CGFS  VV ILK +NV F + +IL +  +R+GLK
Sbjct: 153 LKSRLEKLTNSHPVMLFMKGIPEEPRCGFSRKVVDILKEVNVDFGSFDILSDNEVREGLK 212

Query: 140 EYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLE 178
           ++S+WPTFPQLY +GE  GG DI +  ++SGEL +  +
Sbjct: 213 KFSNWPTFPQLYCNGELLGGADIAIAMHESGELKDAFK 250

[Close]

BLAST of Carg19834 vs. TAIR10
Match: AT3G15660.1 (glutaredoxin 4)

HSP 1 Score: 101.3 bits (251), Expect = 6.5e-22
Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 80  LKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLK 139
           LK  ++  V    V+++MKG  + PQCGFS   V++L+  NVP  + NILE++ L+  +K
Sbjct: 65  LKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVLQQYNVPISSRNILEDQELKNAVK 124

Query: 140 EYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLE 178
            +S WPTFPQ++I GEF GG DI +  +K GEL + L+
Sbjct: 125 SFSHWPTFPQIFIKGEFIGGSDIILNMHKEGELEQKLK 162

[Close]

BLAST of Carg19834 vs. TAIR10
Match: AT5G63030.1 (Thioredoxin superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 7.0e-08
Identity = 31/107 (28.97%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 79  ELKTTIDK---VVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILE---NE 138
           E++  ++K   +V++  VV+F K       CG+   V Q+L  L   F+ + + E     
Sbjct: 14  EMEVVVNKAKEIVSAYPVVVFSK-----TYCGYCQRVKQLLTQLGATFKVLELDEMSDGG 73

Query: 139 LLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKA 180
            ++  L E++   T P ++I G   GGCD  +E  K G+L+ +L +A
Sbjct: 74  EIQSALSEWTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEA 115

[Close]

BLAST of Carg19834 vs. Swiss-Prot
Match: sp|Q851Y7|GRXS7_ORYSJ (Monothiol glutaredoxin-S7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS7 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-48
Identity = 101/165 (61.21%), Postives = 116/165 (70.30%), Query Frame = 0


Query: 23  TKPTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHRSKSGRKFGSFRCFSA-----LS 82
           T   S   + PLP + L R              P    S    +  S RC +A     L+
Sbjct: 4   TAAASVAAISPLPGASLPRPVSARVPLLPRASPPTWRLSVGSARARSTRCLAAAGGGGLA 63

Query: 83  PELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQG 142
           PE++ T+DKVV S KVVLFMKG+KDFPQCGFSHTVVQIL+SL+VPFET+++L NE LRQG
Sbjct: 64  PEMRATLDKVVGSHKVVLFMKGTKDFPQCGFSHTVVQILRSLDVPFETLDVLANEALRQG 123

Query: 143 LKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAMCS 183
           LKEYSSWPTFPQLYIDGEFFGGCDITV+AYKSGEL E LEKAM S
Sbjct: 124 LKEYSSWPTFPQLYIDGEFFGGCDITVDAYKSGELQETLEKAMLS 168

[Close]

BLAST of Carg19834 vs. Swiss-Prot
Match: sp|Q84Y95|GRS14_ARATH (Monothiol glutaredoxin-S14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS14 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 5.1e-48
Identity = 89/114 (78.07%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 70  FRC-FSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINI 129
           FRC  SAL+P+LK T++K+V SEKVVLFMKG++DFP CGFS+TVVQILK+LNVPFE +NI
Sbjct: 60  FRCSASALTPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNI 119

Query: 130 LENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAMCS 183
           LENE+LRQGLKEYS+WPTFPQLYI GEFFGGCDIT+EA+K+GEL E +EKAMCS
Sbjct: 120 LENEMLRQGLKEYSNWPTFPQLYIGGEFFGGCDITLEAFKTGELQEEVEKAMCS 173

[Close]

BLAST of Carg19834 vs. Swiss-Prot
Match: sp|P73056|YC64L_SYNY3 (Uncharacterized monothiol glutaredoxin ycf64-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1846 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-32
Identity = 61/107 (57.01%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 76  LSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLR 135
           ++PE K  ID++VT+ KV++FMKG+K  PQCGFS+ VVQIL  L +PFET+++L +  +R
Sbjct: 1   MNPETKARIDQLVTANKVMVFMKGTKLMPQCGFSNNVVQILNMLGIPFETLDVLADAEIR 60

Query: 136 QGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAMCS 183
           QG+KEYS+WPT PQ+Y++GEF GG DI +E Y++GEL E+LE A+ S
Sbjct: 61  QGIKEYSNWPTIPQVYVNGEFVGGSDIMIELYQNGELQEMLEVALAS 107

[Close]

BLAST of Carg19834 vs. Swiss-Prot
Match: sp|P51384|YCF64_PORPU (Uncharacterized monothiol glutaredoxin ycf64 OS=Porphyra purpurea OX=2787 GN=ycf64 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26
Identity = 54/104 (51.92%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 79  ELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGL 138
           E K  I++++ + K+VLFMKGSK  P CGFS+T +QIL +LN  + T +ILENE +RQ +
Sbjct: 4   ETKKVIEQILDNNKIVLFMKGSKLMPMCGFSNTAIQILNTLNTDYFTYDILENENIRQAI 63

Query: 139 KEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAMCS 183
           KE+SSWPT PQLYI+ EF GG DI +E ++ GEL   +E  + +
Sbjct: 64  KEHSSWPTIPQLYINREFVGGADIMLELFEQGELQAQVETLLAA 107

[Close]

BLAST of Carg19834 vs. Swiss-Prot
Match: sp|Q1XDA3|YCF64_PYRYE (Uncharacterized monothiol glutaredoxin ycf64 OS=Pyropia yezoensis OX=2788 GN=ycf64 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26
Identity = 53/107 (49.53%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 76  LSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLR 135
           +  E K  ID+++   K+VLFMKG+K  P CGFS+T  QIL +LN+ + T +ILE+E +R
Sbjct: 1   MDTETKKRIDQLLNDHKIVLFMKGNKTMPMCGFSNTATQILNTLNIKYFTYDILEDENIR 60

Query: 136 QGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAMCS 183
           + +KEYSSWPT PQLYI+ EF GG DI +E +++GEL   +E  + +
Sbjct: 61  KAIKEYSSWPTIPQLYINREFIGGADIMLELFETGELQAQVEALLAT 107

[Close]

BLAST of Carg19834 vs. TrEMBL
Match: tr|A0A1S3B565|A0A1S3B565_CUCME (uncharacterized monothiol glutaredoxin ycf64-like OS=Cucumis melo OX=3656 GN=LOC103485896 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.3e-74
Identity = 149/183 (81.42%), Postives = 153/183 (83.61%), Query Frame = 0


Query: 1   MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLPTSPLQRRA-HLNRNSQHFHGIPLEH 60
           MSS+ TFQLLLPPFPSS     T  T  L  LP PTSP QR A HLN + QH H I    
Sbjct: 1   MSSVGTFQLLLPPFPSSSSSSFTNKTLSLRPLPFPTSPRQRHAHHLNHSLQHLHPI---- 60

Query: 61  RSKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSL 120
            SKSGR FGSFRC S LSPELKTTIDKV+TSEKVVLFMKGSKDFPQCGFSHTVVQILKSL
Sbjct: 61  -SKSGRNFGSFRCLSGLSPELKTTIDKVITSEKVVLFMKGSKDFPQCGFSHTVVQILKSL 120

Query: 121 NVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKA 180
           NV FETINILENELLRQGLKEYS+WPTFPQLYIDGEFFGGCDITVEAYKSGEL EVLEKA
Sbjct: 121 NVHFETINILENELLRQGLKEYSNWPTFPQLYIDGEFFGGCDITVEAYKSGELQEVLEKA 178

Query: 181 MCS 183
           MCS
Sbjct: 181 MCS 178

[Close]

BLAST of Carg19834 vs. TrEMBL
Match: tr|A0A0A0LMN8|A0A0A0LMN8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074080 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 5.8e-73
Identity = 148/183 (80.87%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 1   MSSLATFQLLLPPFPSSXXXXXTKPTSFLCLLPLPTSPLQRRA-HLNRNSQHFHGIPLEH 60
           MSS+ TFQLLLP FPSS     T     L  LP PTSPLQR A HLN + QH H I    
Sbjct: 1   MSSVGTFQLLLPAFPSSSSSSFTNKALSLRPLPFPTSPLQRHAHHLNHSLQHLHPI---- 60

Query: 61  RSKSGRKFGSFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSL 120
            SKSGR F SFRC S LSPELKTTIDKV+TSEKVVLFMKGSKDFPQCGFSHTVVQILKSL
Sbjct: 61  -SKSGRNFRSFRCLSGLSPELKTTIDKVITSEKVVLFMKGSKDFPQCGFSHTVVQILKSL 120

Query: 121 NVPFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKA 180
           NV FETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGEL EVLEKA
Sbjct: 121 NVHFETINILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELQEVLEKA 178

Query: 181 MCS 183
           MCS
Sbjct: 181 MCS 178

[Close]

BLAST of Carg19834 vs. TrEMBL
Match: tr|A0A022QVE9|A0A022QVE9_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014731mg PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.5e-57
Identity = 115/148 (77.70%), Postives = 126/148 (85.14%), Query Frame = 0


Query: 40  QRRAHLNRNSQH---FHGIPLEHRSKS--GRKFGSFRCFSALSPELKTTIDKVVTSEKVV 99
           Q + H N NS +   FHG+     S +  GR   S RCFSAL+PELKTT+DKVVTS+KVV
Sbjct: 33  QNQGHRNCNSANIKTFHGLSYSGGSSTCGGRNRSSVRCFSALTPELKTTLDKVVTSDKVV 92

Query: 100 LFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSWPTFPQLYIDG 159
           +FMKG+KDFPQCGFS+TVVQILKSLNVPFETINILENELLR GLKEYSSWPTFPQ+YIDG
Sbjct: 93  VFMKGTKDFPQCGFSNTVVQILKSLNVPFETINILENELLRLGLKEYSSWPTFPQIYIDG 152

Query: 160 EFFGGCDITVEAYKSGELLEVLEKAMCS 183
           EFFGGCDITVEAYKSGEL EVLEKAMCS
Sbjct: 153 EFFGGCDITVEAYKSGELQEVLEKAMCS 180

[Close]

BLAST of Carg19834 vs. TrEMBL
Match: tr|W9SVF9|W9SVF9_9ROSA (Monothiol glutaredoxin-S7 OS=Morus notabilis OX=981085 GN=L484_015107 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-54
Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 69  SFRCFSALSPELKTTIDKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINI 128
           SF CFS LSPELKTT+DKVVTS KVVLFMKG+KDFPQCGFSHTVVQILKSLNVPFETINI
Sbjct: 71  SFCCFSVLSPELKTTLDKVVTSHKVVLFMKGTKDFPQCGFSHTVVQILKSLNVPFETINI 130

Query: 129 LENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAMCS 183
           LENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITV+AY+SGEL E+LEKAMCS
Sbjct: 131 LENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVDAYESGELQELLEKAMCS 184

[Close]

BLAST of Carg19834 vs. TrEMBL
Match: tr|A0A2I4FDT8|A0A2I4FDT8_9ROSI (uncharacterized protein LOC108997870 OS=Juglans regia OX=51240 GN=LOC108997870 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 4.6e-54
Identity = 113/158 (71.52%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 25  PTSFLCLLPLPTSPLQRRAHLNRNSQHFHGIPLEHRSKSGRKFGSFRCFSALSPELKTTI 84
           P   LC LPL ++ L   A            P   RS   R+  S RCFSAL+PELKTT+
Sbjct: 34  PKRPLCTLPLTSTALANNA------------PYGCRS---RRIASLRCFSALTPELKTTL 93

Query: 85  DKVVTSEKVVLFMKGSKDFPQCGFSHTVVQILKSLNVPFETINILENELLRQGLKEYSSW 144
           DKVVTS KVVLFMKG+K+FPQCGFS+TVVQIL SLNVPFET NILENELLRQGLKEYSSW
Sbjct: 94  DKVVTSHKVVLFMKGTKEFPQCGFSNTVVQILNSLNVPFETFNILENELLRQGLKEYSSW 153

Query: 145 PTFPQLYIDGEFFGGCDITVEAYKSGELLEVLEKAMCS 183
           PTFPQLYI+GEFFGGCDITV+AYK+GEL EVLEKAMCS
Sbjct: 154 PTFPQLYIEGEFFGGCDITVDAYKNGELQEVLEKAMCS 176

The following BLAST results are available for this feature:

BLAST of Carg19834 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546801.1	1.2e-95	99.45	uncharacterized protein LOC111805800 [Cucurbita pepo subsp. pepo]	[more]
XP_023546803.1	3.6e-95	96.15	uncharacterized protein LOC111805803 [Cucurbita pepo subsp. pepo]	[more]
XP_022929664.1	6.2e-95	99.45	monothiol glutaredoxin-S7, chloroplastic [Cucurbita moschata]	[more]
XP_022997370.1	2.1e-90	95.60	uncharacterized protein LOC111492306 [Cucurbita maxima]	[more]
XP_008441869.1	3.5e-74	81.42	PREDICTED: uncharacterized monothiol glutaredoxin ycf64-like [Cucumis melo] >XP_...	[more]

BLAST of Carg19834 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54900.1	2.8e-49	78.07	CAX interacting protein 1	[more]
AT2G38270.1	9.7e-26	50.00	CAX-interacting protein 2	[more]
AT4G04950.1	1.8e-24	48.98	thioredoxin family protein	[more]
AT3G15660.1	6.5e-22	44.90	glutaredoxin 4	[more]
AT5G63030.1	7.0e-08	28.97	Thioredoxin superfamily protein	[more]

BLAST of Carg19834 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q851Y7\|GRXS7_ORYSJ	1.7e-48	61.21	Monothiol glutaredoxin-S7, chloroplastic OS=Oryza sativa subsp. japonica OX=3994...	[more]
sp\|Q84Y95\|GRS14_ARATH	5.1e-48	78.07	Monothiol glutaredoxin-S14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
sp\|P73056\|YC64L_SYNY3	1.0e-32	57.01	Uncharacterized monothiol glutaredoxin ycf64-like OS=Synechocystis sp. (strain P...	[more]
sp\|P51384\|YCF64_PORPU	1.9e-26	51.92	Uncharacterized monothiol glutaredoxin ycf64 OS=Porphyra purpurea OX=2787 GN=ycf...	[more]
sp\|Q1XDA3\|YCF64_PYRYE	1.9e-26	49.53	Uncharacterized monothiol glutaredoxin ycf64 OS=Pyropia yezoensis OX=2788 GN=ycf...	[more]

BLAST of Carg19834 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B565\|A0A1S3B565_CUCME	2.3e-74	81.42	uncharacterized monothiol glutaredoxin ycf64-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A0A0LMN8\|A0A0A0LMN8_CUCSA	5.8e-73	80.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074080 PE=4 SV=1	[more]
tr\|A0A022QVE9\|A0A022QVE9_ERYGU	7.5e-57	77.70	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014731mg PE...	[more]
tr\|W9SVF9\|W9SVF9_9ROSA	1.2e-54	92.11	Monothiol glutaredoxin-S7 OS=Morus notabilis OX=981085 GN=L484_015107 PE=4 SV=1	[more]
tr\|A0A2I4FDT8\|A0A2I4FDT8_9ROSI	4.6e-54	71.52	uncharacterized protein LOC108997870 OS=Juglans regia OX=51240 GN=LOC108997870 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR033658	GRX_PICOT-like
IPR002109	Glutaredoxin
IPR004480	Monothiol_GRX-rel

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19834-RA	Carg19834-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 83..179 e-value: 3.3E-34 score: 118.7
None	No IPR available	PANTHER	PTHR10293:SF37	MONOTHIOL GLUTAREDOXIN-S14, CHLOROPLASTIC	coord: 62..182
IPR004480	Monothiol glutaredoxin-related	TIGRFAM	TIGR00365	TIGR00365	coord: 82..177 e-value: 5.8E-41 score: 136.6
IPR004480	Monothiol glutaredoxin-related	PANTHER	PTHR10293	GLUTAREDOXIN-RELATED PROTEIN	coord: 62..182
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 93..156 e-value: 4.8E-21 score: 74.6
IPR002109	Glutaredoxin	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 81..182 score: 26.13
IPR033658	Glutaredoxin, PICOT-like	CDD	cd03028	GRX_PICOT_like	coord: 84..172 e-value: 1.69872E-56 score: 174.219
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 79..178

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19834	Csa2G074080	Cucumber (Chinese Long) v2	carcuB0184
Carg19834	MELO3C008750	Melon (DHL92) v3.5.1	carmeB0170
Carg19834	ClCG11G010980	Watermelon (Charleston Gray)	carwcgB0158
Carg19834	CSPI02G07070	Wild cucumber (PI 183967)	carcpiB0191
Carg19834	Cucsa.178670	Cucumber (Gy14) v1	carcgyB0204
Carg19834	CmaCh05G007510	Cucurbita maxima (Rimu)	carcmaB0221
Carg19834	CmoCh05G007920	Cucurbita moschata (Rifu)	carcmoB0232
Carg19834	Lsi11G008500	Bottle gourd (USVL1VR-Ls)	carlsiB148
Carg19834	Cp4.1LG11g06470	Cucurbita pepo (Zucchini)	carcpeB0237
Carg19834	CsGy2G007280	Cucumber (Gy14) v2	carcgybB0179
Carg19834	MELO3C008750.2	Melon (DHL92) v3.6.1	carmedB0172
Carg19834	CsaV3_2G009510	Cucumber (Chinese Long) v3	carcucB0191
Carg19834	Cla97C11G217130	Watermelon (97103) v2	carwmbB0172
Carg19834	Bhi06G000997	Wax gourd	carwgoB0215

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19834	Silver-seed gourd	carcarB004
Carg19834	Cucurbita maxima (Rimu)	carcmaB0220
Carg19834	Cucurbita moschata (Rifu)	carcmoB0231
Carg19834	Cucurbita pepo (Zucchini)	carcpeB0238