Cp4.1LG11g01420 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g01420
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPeroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
LocationCp4.1LG11 : 695684 .. 697962 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGGTTTCATGTTCTTGGGGTTGAGCCCAATGATCGACCCAGGCCTTTATCTAGCGTATGCCCATGTGGGCTTTAGACCCGCATCCATGACCGAAGTAGGCTTGCCGTTGAATATTCTGCTTTTGATTTATTTATGCTGAGCTCACTGAAATCACTGAGCGACAAGACAGAAGCGCGAAAAAGCTCGTAGGATATGATGAGTAGCTTGCGTCGGCGTTGTGGCTGGCTTCTGCGGCCGGTCGTTGCCCATATCGATACAACCACCAAAGCTTCTGTCTCTGCTAAGATTCGGTGGAGGTCGTATTTCAGTTTCGGGTCATCTCCAATGAGATTCAGAGTCAGAGAAAGTAAAGTTCCTTGCCCAACTATCTTGGAAACTATTCGGTATCGATTCTTTTCCTCAGTTTCTGCATCGAAATCCAGGATTGGATTTGTTGGATGGTACATGAGGAAACTCGACACTCACCCGTTTATCACTAAAAGTATCACTTCTTCGCTCATTTATGCGGCTTCTGACTTAACCTCTCAGGTAGAAGATGGTTTTTATGACTGTTTGCATTTCGTTTCCGCCTTCTTTCAGAGTTTTTATTTTCTCATTCATGGTACAGTTCGTGAATTACACGTATGAATAAGCGAGATTGAGTATTGGATAAGACAATTTTATTAATGTATATAGCGTTTTGGAGTAGAAATGTTATATGAAAGGAGGAAGATAGGCATTTTCTGGTGAGTGAATTAGGACTTGAGAGACATCTCAGATGAATTGCCTTATCTTGTAAGCTTCTTACCTTTTATATTTCATTATCATTTTGGTTTTGTTTGGGTTCTATCTGTTTTACAGGGATGGATAAGGATGTCTTCTTTTCTGGGCCTTTTCTACTTATCCTTAACCTCTTGTTCCTTGTATTTCATGGCCATTGATGAATTTGGTTCACTTGTTCAACTTTCTTCAGTTTTCTACTACACCCCTCATGGAGGCAGCTACACCCTTCGCAATTTACCTTCTTATATCCTCTTGTTCTGGTTTATTTCGTCTTCTAATTGTTTGGTTTACTTAAATTGTGTTCAGATGATTACAATGCCATCTCCTGGCTCTTTTGACTTAATAAGAACAACACGGATGACTGCTTATGGATTGTTGATATTGGGGCCATCCCAGCATTTGTGGTTTAATTTCATGTCTACAATCTCACCAACACGAGATTTATTGTCAACTTTCAAGAAGATGTTTCTGGGGCAGGCTGTGTATGGACCTATTATTACCTCTGTTTTCTTCTCCTACAATGCATCGTTGCTAGGTAAATTAGAAAGTGGAAGTTGTAGAACTTAAGATAATCTTTCAATGCCTTGCTATCAGTTGGTAGTGAAAGCCCCTCTGGCTTTATAGGCTCAACGAACCATGAACTGATGGAATTTATAACGTTTTGTTCTAATGTCACTCCCGTAACGCAGGCTGTGAAATATAATTCTGAATGCACTATTTTCAAATTCAGGTGAAAGTGGCCGTGAGATTGCTGCTAGATTAAACCGCGATTTGCTTCCAACAATGTTAAATGGGCTGTTGTATTGGCCAGTCTGCGATTTCCTCACATACAAATTTGTCCCCGTTCATCTACAGGTATGACCTTGGTACTCATTATACAGATCCGAGACGCTGCAATATGTAATCTTTGTTTTGATCGCTCAACTTAGCTGTTTGCTCATAACCACACAGCTAGAAGTCTTATTGAGTTTTGGGACATTGATTTTGCAGCCATTGATAAACAGTTCGTTTCAATATGTGTGGACCATTTATCTGACATACATGGCAAGCTTAAAAGCAGTTGATATCAATTGAAGCAGTAGTAGATTTGAAGAGAGTGCCCATTTGTTTTCAGGAATCGGTTCCCTTATTCGTCTGTCTTGTTTGGCAACAACCCTTGTGAAGCAGCAGCCTTCTACACTGCTTGGTAAGTAAAGCAACAACCCTTGACTGCTCCTTTTATGCAACTTGTGAATGGCTCTTATTATTCACATTCAGCACTGAATTTGAATGTGCTGCTCCCACAGGAAGGAGAAGCTCTTCAATTCAAGGACTTCTTCTACTTCGCGTGAAGGCCTGCAGTGTTTGTTTGATTATGTAAATTTAATGGCGATGAACCAGCAATGACTTTATTATGTTCTTTGGTATGTGAAATCTATTCCTCATTTTGAGCACCATCATCTATCCTTTTCTTGTGTGAGATCCCTTTCGATCGGACAAGTGAACAAAACATTCATTCTAAGGGTATAAAAACCT

mRNA sequence

TAGGGTTTCATGTTCTTGGGGTTGAGCCCAATGATCGACCCAGGCCTTTATCTAGCGTATGCCCATGTGGGCTTTAGACCCGCATCCATGACCGAAGTAGGCTTGCCGTTGAATATTCTGCTTTTGATTTATTTATGCTGAGCTCACTGAAATCACTGAGCGACAAGACAGAAGCGCGAAAAAGCTCGTAGGATATGATGAGTAGCTTGCGTCGGCGTTGTGGCTGGCTTCTGCGGCCGGTCGTTGCCCATATCGATACAACCACCAAAGCTTCTGTCTCTGCTAAGATTCGGTGGAGGTCGTATTTCAGTTTCGGGTCATCTCCAATGAGATTCAGAGTCAGAGAAAGTAAAGTTCCTTGCCCAACTATCTTGGAAACTATTCGGTATCGATTCTTTTCCTCAGTTTCTGCATCGAAATCCAGGATTGGATTTGTTGGATGGTACATGAGGAAACTCGACACTCACCCGTTTATCACTAAAAGTATCACTTCTTCGCTCATTTATGCGGCTTCTGACTTAACCTCTCAGGGATGGATAAGGATGTCTTCTTTTCTGGGCCTTTTCTACTTATCCTTAACCTCTTGTTCCTTGTATTTCATGGCCATTGATGAATTTGGTTCACTTGTTCAACTTTCTTCAGTTTTCTACTACACCCCTCATGGAGGCAGCTACACCCTTCGCAATTTACCTTCTTATATCCTCTTGTTCTGGTTTATTTCGTCTTCTAATTGTTTGGTTTACTTAAATTGTGTTCAGATGATTACAATGCCATCTCCTGGCTCTTTTGACTTAATAAGAACAACACGGATGACTGCTTATGGATTGTTGATATTGGGGCCATCCCAGCATTTGTGGTTTAATTTCATGTCTACAATCTCACCAACACGAGATTTATTGTCAACTTTCAAGAAGATGTTTCTGGGGCAGGCTGTGTATGGACCTATTATTACCTCTGTTTTCTTCTCCTACAATGCATCGTTGCTAGGTGAAAGTGGCCGTGAGATTGCTGCTAGATTAAACCGCGATTTGCTTCCAACAATGTTAAATGGGCTGTTGTATTGGCCAGTCTGCGATTTCCTCACATACAAATTTGTCCCCGTTCATCTACAGCTGTTTGCTCATAACCACACAGCTAGAAGTCTTATTGAGTTTTGGGACATTGATTTTGCAGCCATTGATAAACAGAATCGGTTCCCTTATTCGTCTGTCTTGTTTGGCAACAACCCTTGTGAAGCAGCAGCCTTCTACACTGCTTGGAAGGAGAAGCTCTTCAATTCAAGGACTTCTTCTACTTCGCGTGAAGGCCTGCAGTGTTTGTTTGATTATGTAAATTTAATGGCGATGAACCAGCAATGACTTTATTATGTTCTTTGGTATGTGAAATCTATTCCTCATTTTGAGCACCATCATCTATCCTTTTCTTGTGTGAGATCCCTTTCGATCGGACAAGTGAACAAAACATTCATTCTAAGGGTATAAAAACCT

Coding sequence (CDS)

ATGATGAGTAGCTTGCGTCGGCGTTGTGGCTGGCTTCTGCGGCCGGTCGTTGCCCATATCGATACAACCACCAAAGCTTCTGTCTCTGCTAAGATTCGGTGGAGGTCGTATTTCAGTTTCGGGTCATCTCCAATGAGATTCAGAGTCAGAGAAAGTAAAGTTCCTTGCCCAACTATCTTGGAAACTATTCGGTATCGATTCTTTTCCTCAGTTTCTGCATCGAAATCCAGGATTGGATTTGTTGGATGGTACATGAGGAAACTCGACACTCACCCGTTTATCACTAAAAGTATCACTTCTTCGCTCATTTATGCGGCTTCTGACTTAACCTCTCAGGGATGGATAAGGATGTCTTCTTTTCTGGGCCTTTTCTACTTATCCTTAACCTCTTGTTCCTTGTATTTCATGGCCATTGATGAATTTGGTTCACTTGTTCAACTTTCTTCAGTTTTCTACTACACCCCTCATGGAGGCAGCTACACCCTTCGCAATTTACCTTCTTATATCCTCTTGTTCTGGTTTATTTCGTCTTCTAATTGTTTGGTTTACTTAAATTGTGTTCAGATGATTACAATGCCATCTCCTGGCTCTTTTGACTTAATAAGAACAACACGGATGACTGCTTATGGATTGTTGATATTGGGGCCATCCCAGCATTTGTGGTTTAATTTCATGTCTACAATCTCACCAACACGAGATTTATTGTCAACTTTCAAGAAGATGTTTCTGGGGCAGGCTGTGTATGGACCTATTATTACCTCTGTTTTCTTCTCCTACAATGCATCGTTGCTAGGTGAAAGTGGCCGTGAGATTGCTGCTAGATTAAACCGCGATTTGCTTCCAACAATGTTAAATGGGCTGTTGTATTGGCCAGTCTGCGATTTCCTCACATACAAATTTGTCCCCGTTCATCTACAGCTGTTTGCTCATAACCACACAGCTAGAAGTCTTATTGAGTTTTGGGACATTGATTTTGCAGCCATTGATAAACAGAATCGGTTCCCTTATTCGTCTGTCTTGTTTGGCAACAACCCTTGTGAAGCAGCAGCCTTCTACACTGCTTGGAAGGAGAAGCTCTTCAATTCAAGGACTTCTTCTACTTCGCGTGAAGGCCTGCAGTGTTTGTTTGATTATGTAAATTTAATGGCGATGAACCAGCAATGA

Protein sequence

MMSSLRRRCGWLLRPVVAHIDTTTKASVSAKIRWRSYFSFGSSPMRFRVRESKVPCPTILETIRYRFFSSVSASKSRIGFVGWYMRKLDTHPFITKSITSSLIYAASDLTSQGWIRMSSFLGLFYLSLTSCSLYFMAIDEFGSLVQLSSVFYYTPHGGSYTLRNLPSYILLFWFISSSNCLVYLNCVQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQLFAHNHTARSLIEFWDIDFAAIDKQNRFPYSSVLFGNNPCEAAAFYTAWKEKLFNSRTSSTSREGLQCLFDYVNLMAMNQQ
Homology
[Close]
BLAST of Cp4.1LG11g01420 vs. Swiss-Prot
Match: SYM1_GIBZE (Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 32/126 (25.40%), Postives = 58/126 (46.03%), Query Frame = 1 

Query: 188 QMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRD--LLSTFKKMFLGQ 247
           Q++        DL+RT RM  YG  + GP    WF F++     R+        ++   Q
Sbjct: 37  QLVEKRGAQKHDLVRTGRMALYGGFVFGPVATTWFAFLARRVNVRNNKKAEVLARVACDQ 96

Query: 248 AVYGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHL 307
             + P++  VF S  A++ G+S +E   R+++   P +    + WP    + +  +P+  
Sbjct: 97  LGFAPVMIGVFLSSMATMEGKSVKE---RIDKTWWPALKANWMVWPAVQVINFSLIPLQY 156

Query: 308 QLFAHN 312
           +LF  N
Sbjct: 157 RLFFAN 159

[Close]
BLAST of Cp4.1LG11g01420 vs. TrEMBL
Match: A0A0A0LL22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354840 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-52
Identity = 102/127 (80.31%), Postives = 113/127 (88.98%), Query Frame = 1 

Query: 188 QMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAV 247
           Q IT+ S GSFDLIRT RM AYGLLILGPSQHLWFNFMSTISP+RD LSTF+K+FLGQAV
Sbjct: 106 QTITLSSSGSFDLIRTARMAAYGLLILGPSQHLWFNFMSTISPSRDFLSTFRKIFLGQAV 165

Query: 248 YGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQL 307
           +GP ITSVFFSYNASL GESG EIAARL RDLLPT+LNG+L+WPVCDFLTYKF+PVHLQ 
Sbjct: 166 FGPTITSVFFSYNASLQGESGSEIAARLKRDLLPTLLNGVLFWPVCDFLTYKFIPVHLQP 225

Query: 308 FAHNHTA 315
            A++  A
Sbjct: 226 LANSSFA 232

[Close]
BLAST of Cp4.1LG11g01420 vs. TrEMBL
Match: A0A061FEM4_THECC (Peroxisomal membrane 22 kDa family protein isoform 2 OS=Theobroma cacao GN=TCM_034728 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.6e-45
Identity = 88/121 (72.73%), Postives = 103/121 (85.12%), Query Frame = 1 

Query: 188 QMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAV 247
           QMIT  S G +D IRT RM AYGLL+LGPSQHLWFN +S   P RD+L+TFKKMFLGQAV
Sbjct: 108 QMITSESSG-YDSIRTLRMAAYGLLLLGPSQHLWFNLLSKALPRRDMLTTFKKMFLGQAV 167

Query: 248 YGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQL 307
           YGP+ T+VFFSYNA+L GESG EI ARL RDLLPT++NG ++WP+CDF+TYKFVPVHLQ+
Sbjct: 168 YGPVSTTVFFSYNAALQGESGEEIVARLKRDLLPTLINGAMFWPLCDFVTYKFVPVHLQV 227

Query: 308 F 309
           F
Sbjct: 228 F 227

[Close]
BLAST of Cp4.1LG11g01420 vs. TrEMBL
Match: W9RRN9_9ROSA (PXMP2/4 family protein 4 OS=Morus notabilis GN=L484_010271 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.0e-44
Identity = 91/135 (67.41%), Postives = 107/135 (79.26%), Query Frame = 1 

Query: 176 SSSNCLVYLNC---VQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTR 235
           S S+ L+Y       Q+IT P+ GS D IRT RM AYGLLILGPSQHLWFN MS I P R
Sbjct: 96  SISSSLIYAAADFTSQLITSPASGSLDSIRTLRMAAYGLLILGPSQHLWFNSMSEILPKR 155

Query: 236 DLLSTFKKMFLGQAVYGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPV 295
           DLL+T KK+F+GQA+YGP IT+ FFSYNA L GESG EI ARL RDLLPT++NG ++WPV
Sbjct: 156 DLLTTLKKIFMGQAIYGPCITTCFFSYNAGLQGESGGEIVARLKRDLLPTLINGAMFWPV 215

Query: 296 CDFLTYKFVPVHLQL 308
           CDF+T+KFVPVHLQ+
Sbjct: 216 CDFVTFKFVPVHLQV 230

[Close]
BLAST of Cp4.1LG11g01420 vs. TrEMBL
Match: A5ARH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002029 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44
Identity = 86/130 (66.15%), Postives = 104/130 (80.00%), Query Frame = 1 

Query: 188 QMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAV 247
           Q I +P  GSFD IRT RMT YGLLILGPSQHLWFNF++ + P RD+++T KK+ +GQA+
Sbjct: 96  QKIMLPPSGSFDPIRTLRMTGYGLLILGPSQHLWFNFVAKVLPKRDVITTLKKIIMGQAI 155

Query: 248 YGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQL 307
           +GP I SVFFS NA+L GESG EI ARL RDLLPT LNGLLYWP+CDF+T++FVPVHLQ+
Sbjct: 156 FGPCINSVFFSVNAALQGESGDEIVARLKRDLLPTQLNGLLYWPICDFVTFRFVPVHLQI 215

Query: 308 FAHNHTARSL 318
           +  N    SL
Sbjct: 216 YGVNLKPLSL 225

[Close]
BLAST of Cp4.1LG11g01420 vs. TrEMBL
Match: A0A061FMN8_THECC (Peroxisomal membrane 22 kDa family protein isoform 1 OS=Theobroma cacao GN=TCM_034728 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.8e-44
Identity = 87/119 (73.11%), Postives = 101/119 (84.87%), Query Frame = 1 

Query: 188 QMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAV 247
           QMIT  S G +D IRT RM AYGLL+LGPSQHLWFN +S   P RD+L+TFKKMFLGQAV
Sbjct: 108 QMITSESSG-YDSIRTLRMAAYGLLLLGPSQHLWFNLLSKALPRRDMLTTFKKMFLGQAV 167

Query: 248 YGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQ 307
           YGP+ T+VFFSYNA+L GESG EI ARL RDLLPT++NG ++WP+CDF+TYKFVPVHLQ
Sbjct: 168 YGPVSTTVFFSYNAALQGESGEEIVARLKRDLLPTLINGAMFWPLCDFVTYKFVPVHLQ 225

[Close]
BLAST of Cp4.1LG11g01420 vs. TAIR10
Match: AT5G43140.1 (AT5G43140.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 178.3 bits (451), Expect = 8.9e-45
Identity = 85/148 (57.43%), Postives = 114/148 (77.03%), Query Frame = 1 

Query: 162 LRNLPSYILLFWFISSSNCLVYLNC---VQMITMPSPGSFDLIRTTRMTAYGLLILGPSQ 221
           LR L S+  +   I++S  ++Y+      QMITM   GSFDLIRT RM ++GL+ LGPSQ
Sbjct: 83  LRKLESHPFMTKSITTS--VIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGPSQ 142

Query: 222 HLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLLGESGREIAARLNRD 281
           HLWF+++S I P RD+L+TFKK+ +GQ ++GP+  +VF+SYNA+L GE+  EI ARL RD
Sbjct: 143 HLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEIVARLKRD 202

Query: 282 LLPTMLNGLLYWPVCDFLTYKFVPVHLQ 307
           LLPT+ NGL+YWPVCDF+T+K+VPVHLQ
Sbjct: 203 LLPTLKNGLMYWPVCDFVTFKYVPVHLQ 228

[Close]
BLAST of Cp4.1LG11g01420 vs. TAIR10
Match: AT4G33905.1 (AT4G33905.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 169.9 bits (429), Expect = 3.2e-42
Identity = 81/139 (58.27%), Postives = 102/139 (73.38%), Query Frame = 1 

Query: 176 SSSNCLVYLNC---VQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTR 235
           S ++ L+Y+      Q I   S  S+DL+RT RM  YGLLILGP+ H WFN MS++ P R
Sbjct: 99  SVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILGPTLHYWFNLMSSLFPKR 158

Query: 236 DLLSTFKKMFLGQAVYGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPV 295
           DL++TFKKM +GQ VYGP +  VFFS NA+L GE+G EI ARL RDLLPTMLNG++YWP+
Sbjct: 159 DLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVARLKRDLLPTMLNGVMYWPL 218

Query: 296 CDFLTYKFVPVHLQLFAHN 312
           CDF+T+KF PV+LQ    N
Sbjct: 219 CDFITFKFCPVYLQPLVSN 237

[Close]
BLAST of Cp4.1LG11g01420 vs. TAIR10
Match: AT2G14860.1 (AT2G14860.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-40
Identity = 76/139 (54.68%), Postives = 99/139 (71.22%), Query Frame = 1 

Query: 176 SSSNCLVYLNC---VQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTR 235
           S ++ L+Y+      Q I   S  S+DL+RT RM  YGL +LGP+ H WFNFMS + P +
Sbjct: 90  SVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLHYWFNFMSRLFPKQ 149

Query: 236 DLLSTFKKMFLGQAVYGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPV 295
           DL++TFKKM +GQ +YGPI+T +FFS NASL GE G  I ARL RDLLP + NG++YWP+
Sbjct: 150 DLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARLKRDLLPALFNGVMYWPL 209

Query: 296 CDFLTYKFVPVHLQLFAHN 312
           CDF+T++F PVHLQ    N
Sbjct: 210 CDFITFRFFPVHLQPLVSN 228

[Close]
BLAST of Cp4.1LG11g01420 vs. TAIR10
Match: AT2G42770.1 (AT2G42770.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 72.4 bits (176), Expect = 6.9e-13
Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 1 

Query: 199 DLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFFS 258
           D IR  RM++YG L+ GP  + W+ F+    P     +   K+ L Q + GP + +V F+
Sbjct: 105 DWIRALRMSSYGFLLYGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFA 164

Query: 259 YNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQL 308
           +N   LG+   E+  +  +D LPT+L G  +W     L +  VP+  ++
Sbjct: 165 WNNLWLGKLS-ELGNKYQKDALPTLLYGFRFWVPVSILNFWVVPLQARV 212

[Close]
BLAST of Cp4.1LG11g01420 vs. NCBI nr
Match: gi|659087659|ref|XP_008444568.1| (PREDICTED: PXMP2/4 family protein 4 [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 9.9e-54
Identity = 105/127 (82.68%), Postives = 115/127 (90.55%), Query Frame = 1 

Query: 188 QMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAV 247
           Q IT+ S GSFDLIRTTRM AYGLLILGPSQHLWFNFMSTISP+RDL STF+K+FLGQAV
Sbjct: 110 QTITLSSSGSFDLIRTTRMAAYGLLILGPSQHLWFNFMSTISPSRDLFSTFRKIFLGQAV 169

Query: 248 YGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQL 307
           YGPIITSVFFSYNASL GESG EIAARL RDLLPT+LNG+L+WPVCDFLTYKF+PVHLQ 
Sbjct: 170 YGPIITSVFFSYNASLQGESGSEIAARLKRDLLPTLLNGVLFWPVCDFLTYKFIPVHLQP 229

Query: 308 FAHNHTA 315
            A++  A
Sbjct: 230 LANSSFA 236

[Close]
BLAST of Cp4.1LG11g01420 vs. NCBI nr
Match: gi|449450271|ref|XP_004142887.1| (PREDICTED: PXMP2/4 family protein 4 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 4.2e-52
Identity = 102/127 (80.31%), Postives = 113/127 (88.98%), Query Frame = 1 

Query: 188 QMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAV 247
           Q IT+ S GSFDLIRT RM AYGLLILGPSQHLWFNFMSTISP+RD LSTF+K+FLGQAV
Sbjct: 106 QTITLSSSGSFDLIRTARMAAYGLLILGPSQHLWFNFMSTISPSRDFLSTFRKIFLGQAV 165

Query: 248 YGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQL 307
           +GP ITSVFFSYNASL GESG EIAARL RDLLPT+LNG+L+WPVCDFLTYKF+PVHLQ 
Sbjct: 166 FGPTITSVFFSYNASLQGESGSEIAARLKRDLLPTLLNGVLFWPVCDFLTYKFIPVHLQP 225

Query: 308 FAHNHTA 315
            A++  A
Sbjct: 226 LANSSFA 232

[Close]
BLAST of Cp4.1LG11g01420 vs. NCBI nr
Match: gi|590597166|ref|XP_007018535.1| (Peroxisomal membrane 22 kDa family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 189.5 bits (480), Expect = 1.1e-44
Identity = 88/121 (72.73%), Postives = 103/121 (85.12%), Query Frame = 1 

Query: 188 QMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAV 247
           QMIT  S G +D IRT RM AYGLL+LGPSQHLWFN +S   P RD+L+TFKKMFLGQAV
Sbjct: 108 QMITSESSG-YDSIRTLRMAAYGLLLLGPSQHLWFNLLSKALPRRDMLTTFKKMFLGQAV 167

Query: 248 YGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQL 307
           YGP+ T+VFFSYNA+L GESG EI ARL RDLLPT++NG ++WP+CDF+TYKFVPVHLQ+
Sbjct: 168 YGPVSTTVFFSYNAALQGESGEEIVARLKRDLLPTLINGAMFWPLCDFVTYKFVPVHLQV 227

Query: 308 F 309
           F
Sbjct: 228 F 227

[Close]
BLAST of Cp4.1LG11g01420 vs. NCBI nr
Match: gi|703133839|ref|XP_010105487.1| (PXMP2/4 family protein 4 [Morus notabilis])

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44
Identity = 91/135 (67.41%), Postives = 107/135 (79.26%), Query Frame = 1 

Query: 176 SSSNCLVYLNC---VQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTR 235
           S S+ L+Y       Q+IT P+ GS D IRT RM AYGLLILGPSQHLWFN MS I P R
Sbjct: 96  SISSSLIYAAADFTSQLITSPASGSLDSIRTLRMAAYGLLILGPSQHLWFNSMSEILPKR 155

Query: 236 DLLSTFKKMFLGQAVYGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPV 295
           DLL+T KK+F+GQA+YGP IT+ FFSYNA L GESG EI ARL RDLLPT++NG ++WPV
Sbjct: 156 DLLTTLKKIFMGQAIYGPCITTCFFSYNAGLQGESGGEIVARLKRDLLPTLINGAMFWPV 215

Query: 296 CDFLTYKFVPVHLQL 308
           CDF+T+KFVPVHLQ+
Sbjct: 216 CDFVTFKFVPVHLQV 230

[Close]
BLAST of Cp4.1LG11g01420 vs. NCBI nr
Match: gi|147857986|emb|CAN80360.1| (hypothetical protein VITISV_002029 [Vitis vinifera])

HSP 1 Score: 188.0 bits (476), Expect = 3.2e-44
Identity = 86/130 (66.15%), Postives = 104/130 (80.00%), Query Frame = 1 

Query: 188 QMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAV 247
           Q I +P  GSFD IRT RMT YGLLILGPSQHLWFNF++ + P RD+++T KK+ +GQA+
Sbjct: 96  QKIMLPPSGSFDPIRTLRMTGYGLLILGPSQHLWFNFVAKVLPKRDVITTLKKIIMGQAI 155

Query: 248 YGPIITSVFFSYNASLLGESGREIAARLNRDLLPTMLNGLLYWPVCDFLTYKFVPVHLQL 307
           +GP I SVFFS NA+L GESG EI ARL RDLLPT LNGLLYWP+CDF+T++FVPVHLQ+
Sbjct: 156 FGPCINSVFFSVNAALQGESGDEIVARLKRDLLPTQLNGLLYWPICDFVTFRFVPVHLQI 215

Query: 308 FAHNHTARSL 318
           +  N    SL
Sbjct: 216 YGVNLKPLSL 225

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g01420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SYM1_GIBZE1.4e-0725.40Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL ... [more]
BLAST of Cp4.1LG11g01420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL22_CUCSA2.9e-5280.31Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354840 PE=3 SV=1[more]
A0A061FEM4_THECC7.6e-4572.73Peroxisomal membrane 22 kDa family protein isoform 2 OS=Theobroma cacao GN=TCM_0... [more]
W9RRN9_9ROSA1.0e-4467.41PXMP2/4 family protein 4 OS=Morus notabilis GN=L484_010271 PE=3 SV=1[more]
A5ARH5_VITVI2.2e-4466.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002029 PE=3 SV=1[more]
A0A061FMN8_THECC3.8e-4473.11Peroxisomal membrane 22 kDa family protein isoform 1 OS=Theobroma cacao GN=TCM_0... [more]
BLAST of Cp4.1LG11g01420 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G43140.18.9e-4557.43 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein[more]
AT4G33905.13.2e-4258.27 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein[more]
AT2G14860.11.0e-4054.68 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein[more]
AT2G42770.16.9e-1331.19 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein[more]
BLAST of Cp4.1LG11g01420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087659|ref|XP_008444568.1|9.9e-5482.68PREDICTED: PXMP2/4 family protein 4 [Cucumis melo][more]
gi|449450271|ref|XP_004142887.1|4.2e-5280.31PREDICTED: PXMP2/4 family protein 4 [Cucumis sativus][more]
gi|590597166|ref|XP_007018535.1|1.1e-4472.73Peroxisomal membrane 22 kDa family protein isoform 2 [Theobroma cacao][more]
gi|703133839|ref|XP_010105487.1|1.4e-4467.41PXMP2/4 family protein 4 [Morus notabilis][more]
gi|147857986|emb|CAN80360.1|3.2e-4466.15hypothetical protein VITISV_002029 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g01420.1Cp4.1LG11g01420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 195..306
score: 9.4E-98coord: 69..120
score: 9.4
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 263..311
score: 2.
NoneNo IPR availablePANTHERPTHR11266:SF43SUBFAMILY NOT NAMEDcoord: 69..120
score: 9.4E-98coord: 195..306
score: 9.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g01420Cucsa.395720Cucumber (Gy14) v1cgycpeB1039
Cp4.1LG11g01420CmaCh12G005910Cucurbita maxima (Rimu)cmacpeB179
Cp4.1LG11g01420CmaCh05G001490Cucurbita maxima (Rimu)cmacpeB766
Cp4.1LG11g01420CmoCh05G001500Cucurbita moschata (Rifu)cmocpeB720
Cp4.1LG11g01420CmoCh12G005300Cucurbita moschata (Rifu)cmocpeB154
Cp4.1LG11g01420Cla022618Watermelon (97103) v1cpewmB101
Cp4.1LG11g01420Csa2G354840Cucumber (Chinese Long) v2cpecuB096
Cp4.1LG11g01420MELO3C010815Melon (DHL92) v3.5.1cpemeB091
Cp4.1LG11g01420ClCG08G016380Watermelon (Charleston Gray)cpewcgB125
Cp4.1LG11g01420CSPI02G18630Wild cucumber (PI 183967)cpecpiB092
Cp4.1LG11g01420Lsi08G015170Bottle gourd (USVL1VR-Ls)cpelsiB100
Cp4.1LG11g01420MELO3C010815.2Melon (DHL92) v3.6.1cpemedB115
Cp4.1LG11g01420CsaV3_2G026230Cucumber (Chinese Long) v3cpecucB0106
Cp4.1LG11g01420Bhi04G000383Wax gourdcpewgoB0141
Cp4.1LG11g01420Carg11875Silver-seed gourdcarcpeB0263
Cp4.1LG11g01420Carg16399Silver-seed gourdcarcpeB0636
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG11g01420Cp4.1LG07g05010Cucurbita pepo (Zucchini)cpecpeB146
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g01420Silver-seed gourdcarcpeB0446
Cp4.1LG11g01420Silver-seed gourdcarcpeB0556
Cp4.1LG11g01420Silver-seed gourdcarcpeB1078
Cp4.1LG11g01420Cucumber (Chinese Long) v3cpecucB0127
Cp4.1LG11g01420Cucumber (Chinese Long) v3cpecucB0136
Cp4.1LG11g01420Cucumber (Chinese Long) v3cpecucB0141
Cp4.1LG11g01420Wax gourdcpewgoB0152
Cp4.1LG11g01420Wax gourdcpewgoB0157
Cp4.1LG11g01420Cucurbita pepo (Zucchini)cpecpeB062
Cp4.1LG11g01420Cucurbita pepo (Zucchini)cpecpeB111
Cp4.1LG11g01420Cucurbita pepo (Zucchini)cpecpeB125
Cp4.1LG11g01420Cucurbita pepo (Zucchini)cpecpeB133
Cp4.1LG11g01420Cucurbita pepo (Zucchini)cpecpeB136
Cp4.1LG11g01420Cucumber (Gy14) v1cgycpeB0213
Cp4.1LG11g01420Cucumber (Gy14) v1cgycpeB0592
Cp4.1LG11g01420Cucumber (Gy14) v1cgycpeB0919
Cp4.1LG11g01420Cucurbita maxima (Rimu)cmacpeB030
Cp4.1LG11g01420Cucurbita maxima (Rimu)cmacpeB108
Cp4.1LG11g01420Cucurbita maxima (Rimu)cmacpeB460
Cp4.1LG11g01420Cucurbita moschata (Rifu)cmocpeB006
Cp4.1LG11g01420Cucurbita moschata (Rifu)cmocpeB087
Cp4.1LG11g01420Cucurbita moschata (Rifu)cmocpeB420
Cp4.1LG11g01420Wild cucumber (PI 183967)cpecpiB112
Cp4.1LG11g01420Wild cucumber (PI 183967)cpecpiB122
Cp4.1LG11g01420Cucumber (Chinese Long) v2cpecuB116
Cp4.1LG11g01420Cucumber (Chinese Long) v2cpecuB124
Cp4.1LG11g01420Bottle gourd (USVL1VR-Ls)cpelsiB080
Cp4.1LG11g01420Bottle gourd (USVL1VR-Ls)cpelsiB085
Cp4.1LG11g01420Watermelon (Charleston Gray)cpewcgB103
Cp4.1LG11g01420Watermelon (Charleston Gray)cpewcgB113
Cp4.1LG11g01420Watermelon (97103) v1cpewmB108
Cp4.1LG11g01420Watermelon (97103) v1cpewmB112
Cp4.1LG11g01420Melon (DHL92) v3.5.1cpemeB081
Cp4.1LG11g01420Melon (DHL92) v3.5.1cpemeB107
Cp4.1LG11g01420Melon (DHL92) v3.5.1cpemeB110
Cp4.1LG11g01420Cucumber (Gy14) v2cgybcpeB161
Cp4.1LG11g01420Cucumber (Gy14) v2cgybcpeB478
Cp4.1LG11g01420Cucumber (Gy14) v2cgybcpeB719
Cp4.1LG11g01420Cucumber (Gy14) v2cgybcpeB896
Cp4.1LG11g01420Melon (DHL92) v3.6.1cpemedB103
Cp4.1LG11g01420Melon (DHL92) v3.6.1cpemedB132
Cp4.1LG11g01420Melon (DHL92) v3.6.1cpemedB135