CmoCh05G001500 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G001500
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Location	Cmo_Chr05 : 657611 .. 659672 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACCCAGGCCTTTATCTAGCGTATGCCCATGTGGGCTTTAGACCCGCATCCATGACGAAGTAGGCTTGCCGTTGAATATTCTGCTTTTGATTTATTCATGCTGAGCTCACTGAAATCACTGAGCGAGAAGACAGAAGCGCGAAAAAGTTCGTAGGATATGGTGAATAGCTTGCGTCGGCGTTGTGGCTGGCTTCTGCGGCCGGTCGTTGCCCATATCGATACAACCACCAAAGCTTCTGTCTCTGCTAAGATTCGGTGGAGGTCGTATTTCAGTTTCGGGTCATCTCCAATGAGATTCAGAGTCAGAGAAAGTAAAGTTCCTTGCCCAACTATCTTGGAAACTATTCGGTATCGATTCTTTTCCTCAGTTTCTGCATCGAAATCAAGGATTGGATTTGTTGGATGGTACATGAGGAAACTCGACACTCACCCGTTTATCACTAAAAGTATCACTTCTTCGCTCATTTATGGGGCTTCTGACTTGACCTCTCAGGTAGAAGATGGTTTTTATGACTGTTTGCATTTCGTTTCCGCCTTCTTTCAGAGTTTTTATTTTCTCATTCATGGTACAGTTCGTGAATTACACGCATGTCATGAATAAACGAGATTGAGTATTGGATAAGACAATTTTATTACTGTACATAGCGTTTTGGAGTAGAAATGTTATATGAAAGGAGGAAGATAGGCATTTTCTGGTGAGTGAATTAGGACTTGAGAGACATCTCAGATGAATTGCCTTATCTTGTAAGCTTCTTACCTTTTATATTTCATTATCATTTTGGTTTTGTTTGGGTTCTATCTGTTTTACAGGGATGGATAAGGATGTCTTCTTTTCTGGGCCTTTTCTACTTATCCTTAACCTCTTGTTCCTTGTATTTCATGGCCATTGATGAATTTGGTTCACTTGTTCAACTTTCTTCAGTTTTCTACTACACCCTTCATGGAGGCAGCTACACCCTTGCAATTTACCTTCTTATATCCTCTTGTTCTGGTTTATTTCGTCTTCTAATTGTTTGGTTTACTTATATTGTGTTCAGATGATTACAATGCCATCTCCTGGCTCTTTTGACTTAATAAGAACAACACGGATGACTGCTTATGGGTTGTTGATATTGGGGCCATCCCAGCATTTGTGGTTTAATTTCATGTCTACAATCTCACCAACACGAGATTTATTGTCAACTTTCAAGAAGATGTTTCTGGGGCAGGCTGTGTATGGACCTATTATTACCTCTGTTTTCTTCTCCTACAATGCATCGTTGCAAGGTAATTAGAAAGTGGAAGTTGTAGAACTTAAGATAATCTTTCAATGCCTTGCCATCAGTTGGTAGTGAAAGCCCCTCTGGCTTTATAGGCTCAACGAACCATGAACTGATGGAATTTATAACGTTTTGTTCTAATGTCACTCCTGTAACGCAGGCTGTGAAATATAATTCTGAATGCACTATTTTCAAATTCAGGTGAAAGTGGCCGTGAGATTGCTGCTAGATTAAACCGCGATTTGCTTCCAACAATGTTAAATGGGCTGTTGTATTGGCCAGTCTGCGATTTCGTCACATACAAATTTGTCCCCGTTCATCTACAGGTATGAACTTGGTACTCATTATACAGATCCGAGATGCTGCGATATGTAATCTTTGTTTTGATCGCTCAACTTAGCTGTTTGCTCATAACCACACAGCTAGAAGTCTTATTGAGTTTTGGGACATTGATTTTGCAGCCATTGATAAACAGTTCGTTTCAATATGTGTGGACCATTTATCTGACATACATGGCAAGCTTAAAAGCAGTTGAGATCAATTGAAGCAGTAGTAGATTTGAAGAGAGTGCCCATTTGTTTTCAGGAATCGGTTCCCTTATTCGTCTGTCTTGTTTGACAACAACCCTTGTGAAGCAGCAGCCTTCTACACTGCTTGGTAAGTAAAGCAACAACCCTTGACTGCTCCTTTTATGCAACTTGTGAATGGCTCTTATTATTCACATTCAGCACTGAATTTGGATGTGCTGCTCCCACAGGAAGGAGAAGCTCTTCAATTCAAGGACTTCTTCTACTTCGCGTGA

mRNA sequence

CGACCCAGGCCTTTATCTAGCGTATGCCCATGTGGGCTTTAGACCCGCATCCATGACGAAGTAGGCTTGCCGTTGAATATTCTGCTTTTGATTTATTCATGCTGAGCTCACTGAAATCACTGAGCGAGAAGACAGAAGCGCGAAAAAGTTCGTAGGATATGGTGAATAGCTTGCGTCGGCGTTGTGGCTGGCTTCTGCGGCCGGTCGTTGCCCATATCGATACAACCACCAAAGCTTCTGTCTCTGCTAAGATTCGGTGGAGGTCGTATTTCAGTTTCGGGTCATCTCCAATGAGATTCAGAGTCAGAGAAAGTAAAGTTCCTTGCCCAACTATCTTGGAAACTATTCGGTATCGATTCTTTTCCTCAGTTTCTGCATCGAAATCAAGGATTGGATTTGTTGGATGGTACATGAGGAAACTCGACACTCACCCGTTTATCACTAAAAGTATCACTTCTTCGCTCATTTATGGGGCTTCTGACTTGACCTCTCAGATGATTACAATGCCATCTCCTGGCTCTTTTGACTTAATAAGAACAACACGGATGACTGCTTATGGGTTGTTGATATTGGGGCCATCCCAGCATTTGTGGTTTAATTTCATGTCTACAATCTCACCAACACGAGATTTATTGTCAACTTTCAAGAAGATGTTTCTGGGGCAGGCTGTGTATGGACCTATTATTACCTCTGTTTTCTTCTCCTACAATGCATCGTTGCAAGTTGGTAGTGAAAGCCCCTCTGGCTTTATAGGCTCAACGAACCATGAACTGATGGAATTTATAACGTTTTGTTCTAATGTCACTCCTGTAACGCAGGCTGTGAAATATAATTCTGAATGCACTATTTTCAAATTCAGTGGCCGTGAGATTGCTGCTAGATTAAACCGCGATTTGCTTCCAACAATGTTAAATGGGCTGTTGTATTGGCCAGTCTGCGATTTCGTCACATACAAATTTGTCCCCGTTCATCTACAGCTGTTTGCTCATAACCACACAGCTAGAAGTCTTATTGAGTTTTGGGACATTGATTTTGCAGCCATTGATAAACAGTTCGTTTCAATATGTGTGGACCATTTATCTGACATACATGGCAAGCTTAAAAGCAGAATCGGTTCCCTTATTCGTCTGTCTTGTTTGACAACAACCCTTGTGAAGCAGCAGCCTTCTACACTGCTTGCACTGAATTTGGATGTGCTGCTCCCACAGGAAGGAGAAGCTCTTCAATTCAAGGACTTCTTCTACTTCGCGTGA

Coding sequence (CDS)

ATGGTGAATAGCTTGCGTCGGCGTTGTGGCTGGCTTCTGCGGCCGGTCGTTGCCCATATCGATACAACCACCAAAGCTTCTGTCTCTGCTAAGATTCGGTGGAGGTCGTATTTCAGTTTCGGGTCATCTCCAATGAGATTCAGAGTCAGAGAAAGTAAAGTTCCTTGCCCAACTATCTTGGAAACTATTCGGTATCGATTCTTTTCCTCAGTTTCTGCATCGAAATCAAGGATTGGATTTGTTGGATGGTACATGAGGAAACTCGACACTCACCCGTTTATCACTAAAAGTATCACTTCTTCGCTCATTTATGGGGCTTCTGACTTGACCTCTCAGATGATTACAATGCCATCTCCTGGCTCTTTTGACTTAATAAGAACAACACGGATGACTGCTTATGGGTTGTTGATATTGGGGCCATCCCAGCATTTGTGGTTTAATTTCATGTCTACAATCTCACCAACACGAGATTTATTGTCAACTTTCAAGAAGATGTTTCTGGGGCAGGCTGTGTATGGACCTATTATTACCTCTGTTTTCTTCTCCTACAATGCATCGTTGCAAGTTGGTAGTGAAAGCCCCTCTGGCTTTATAGGCTCAACGAACCATGAACTGATGGAATTTATAACGTTTTGTTCTAATGTCACTCCTGTAACGCAGGCTGTGAAATATAATTCTGAATGCACTATTTTCAAATTCAGTGGCCGTGAGATTGCTGCTAGATTAAACCGCGATTTGCTTCCAACAATGTTAAATGGGCTGTTGTATTGGCCAGTCTGCGATTTCGTCACATACAAATTTGTCCCCGTTCATCTACAGCTGTTTGCTCATAACCACACAGCTAGAAGTCTTATTGAGTTTTGGGACATTGATTTTGCAGCCATTGATAAACAGTTCGTTTCAATATGTGTGGACCATTTATCTGACATACATGGCAAGCTTAAAAGCAGAATCGGTTCCCTTATTCGTCTGTCTTGTTTGACAACAACCCTTGTGAAGCAGCAGCCTTCTACACTGCTTGCACTGAATTTGGATGTGCTGCTCCCACAGGAAGGAGAAGCTCTTCAATTCAAGGACTTCTTCTACTTCGCGTGA

Homology

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BLAST of CmoCh05G001500 vs. Swiss-Prot
Match: SYM1_GIBZE (Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.0e-08
Identity = 31/112 (27.68%), Postives = 57/112 (50.89%), Query Frame = 1


Query: 80  FVGWYMRKLDTHPFITKSITSSLIYGASDLTS-QMITMPSPGSFDLIRTTRMTAYGLLIL 139
           F+ WY  +L   P +T+S+T++ ++   D+T+ Q++        DL+RT RM  YG  + 
Sbjct: 4   FIRWYNSRLAARPLLTQSVTTAFLFATGDVTAQQLVEKRGAQKHDLVRTGRMALYGGFVF 63

Query: 140 GPSQHLWFNFMSTISPTRD--LLSTFKKMFLGQAVYGPIITSVFFSYNASLQ 189
           GP    WF F++     R+        ++   Q  + P++  VF S  A+++
Sbjct: 64  GPVATTWFAFLARRVNVRNNKKAEVLARVACDQLGFAPVMIGVFLSSMATME 115

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BLAST of CmoCh05G001500 vs. Swiss-Prot
Match: SYM1_NEUCR (Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 5.9e-08
Identity = 29/111 (26.13%), Postives = 55/111 (49.55%), Query Frame = 1


Query: 81  VGWYMRKLDTHPFITKSITSSLIYGASDLTS-QMITMPSPGSFDLIRTTRMTAYGLLILG 140
           + WY  +L   P +T+++T+S+++G  D+ + Q++      + DL RT RM  YG  + G
Sbjct: 2   LSWYKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFG 61

Query: 141 PSQHLWFNFMS--TISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLQ 189
           P+   WF F+    + P     +   ++   Q ++ P    +F    A L+
Sbjct: 62  PAATTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIFLGSMAVLE 112

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BLAST of CmoCh05G001500 vs. TrEMBL
Match: A0A0A0LL22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354840 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 6.7e-67
Identity = 134/192 (69.79%), Postives = 154/192 (80.21%), Query Frame = 1


Query: 2   VNSLRRRCGWLLRPVVAHIDTTTKASVSAKIRWRSYFSFGSSPMRFRVRESKVPCPTILE 61
           +NSLRR   WLL PVVA+I+ + KASVS KI+WR+Y SFGS PMRF  R +++  P+   
Sbjct: 1   MNSLRRSYSWLLLPVVANINISAKASVSPKIQWRAYLSFGSPPMRFTSRGNQIYSPSTQH 60

Query: 62  TIRYRFFSSVSASKSRIGFVGWYMRKLDTHPFITKSITSSLIYGASDLTSQMITMPSPGS 121
                 FSS S+SK  IGFVGWY+RK+DTHPFITK IT+SLIY A+DLTSQ IT+ S GS
Sbjct: 61  R-----FSSSSSSKPGIGFVGWYLRKVDTHPFITKGITASLIYAAADLTSQTITLSSSGS 120

Query: 122 FDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFF 181
           FDLIRT RM AYGLLILGPSQHLWFNFMSTISP+RD LSTF+K+FLGQAV+GP ITSVFF
Sbjct: 121 FDLIRTARMAAYGLLILGPSQHLWFNFMSTISPSRDFLSTFRKIFLGQAVFGPTITSVFF 180

Query: 182 SYNASLQVGSES 194
           SYNASLQ  S S
Sbjct: 181 SYNASLQGESGS 187

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BLAST of CmoCh05G001500 vs. TrEMBL
Match: F6GZN2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g09300 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.3e-41
Identity = 98/210 (46.67%), Postives = 130/210 (61.90%), Query Frame = 1


Query: 31  KIRWRSYFSFGSSPMRFRVRESKVPCPTILETIRYRFFSSVSASKSRIGFVGWYMRKLDT 90
           KI+  +  SF S      +R S++  P  +  +  R FSS S+  S+IGF+GWY+  L+T
Sbjct: 17  KIKTSTPSSFASVHQLRNIRNSEISRP--INLLSSRSFSSSSSRSSKIGFLGWYLGMLET 76

Query: 91  HPFITKSITSSLIYGASDLTSQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMS 150
            P ITKS+TSSLI+ A+DLTSQ I +P  GSFD IRT RMT YGLLILGPSQHLWFNF++
Sbjct: 77  SPLITKSVTSSLIFAAADLTSQKIMLPPSGSFDPIRTLRMTGYGLLILGPSQHLWFNFVA 136

Query: 151 TISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLQVGSES-----------PSGFIG 210
            + P RD+++T KK+ +GQA++GP I SVFFS NA+LQ  S             P+   G
Sbjct: 137 KVLPKRDVITTLKKIIMGQAIFGPCINSVFFSVNAALQGESGDEIVARLKRDLLPTQLNG 196

Query: 211 STNHELMEFITFCSNVTPVTQAVKYNSECT 230
                + +F+TF     PV      NS C+
Sbjct: 197 LLYWPICDFVTF--RFVPVHLQPLMNSSCS 222

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BLAST of CmoCh05G001500 vs. TrEMBL
Match: I3SB40_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 92/177 (51.98%), Postives = 118/177 (66.67%), Query Frame = 1


Query: 65  YRFFSSVSASKSRIGFVGWYMRKLDTHPFITKSITSSLIYGASDLTSQMITMPSPGSFDL 124
           Y  FSS S+S  ++GF+GWY+RKL+ HP +TKSIT+S+I+ ASDLTSQMIT+ S  SFDL
Sbjct: 52  YPPFSSSSSSSHKLGFIGWYLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDL 111

Query: 125 IRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYN 184
            RT+RM  YGLLILGPSQH+WFNF+S I P  D+ +T KK+FLGQAV+GP+I SVFFSYN
Sbjct: 112 KRTSRMAIYGLLILGPSQHMWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFSYN 171

Query: 185 ASLQVGSESPSGFIGSTNHELM-------------EFITFCSNVTPVTQAVKYNSEC 229
            ++Q   ES    I     +L+             +F+TF     P+      NS C
Sbjct: 172 GAVQ--GESCDEIITRLKRDLLPTLLGGALFWPPCDFVTF--KFVPIHLQPLLNSSC 224

[Close]

BLAST of CmoCh05G001500 vs. TrEMBL
Match: A5ARH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002029 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.4e-40
Identity = 90/176 (51.14%), Postives = 120/176 (68.18%), Query Frame = 1


Query: 31  KIRWRSYFSFGSSPMRFRVRESKVPCPTILETIRYRFFSSVSASKSRIGFVGWYMRKLDT 90
           KI+  +  SF S      +R S++  P  +  +  R FSS S+  S+IGF+GWY+  L+T
Sbjct: 17  KIKTSTPSSFASVHQLRNIRNSEISRP--INLLSSRSFSSSSSRSSKIGFLGWYLGMLET 76

Query: 91  HPFITKSITSSLIYGASDLTSQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMS 150
            P ITKS+TSSLI+ A+DLTSQ I +P  GSFD IRT RMT YGLLILGPSQHLWFNF++
Sbjct: 77  SPLITKSVTSSLIFAAADLTSQKIMLPPSGSFDPIRTLRMTGYGLLILGPSQHLWFNFVA 136

Query: 151 TISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLQVGSESPSGFIGSTNHELM 207
            + P RD+++T KK+ +GQA++GP I SVFFS NA+LQ   ES    +     +L+
Sbjct: 137 KVLPKRDVITTLKKIIMGQAIFGPCINSVFFSVNAALQ--GESGDEIVARLKRDLL 188

[Close]

BLAST of CmoCh05G001500 vs. TrEMBL
Match: A0A067H1E4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024491mg PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.1e-40
Identity = 91/168 (54.17%), Postives = 120/168 (71.43%), Query Frame = 1


Query: 33  RWRSYFSFGSSPMRFRVRESKVPCPTILETIRYRFFS------SVSASKSRIGFVGWYMR 92
           +WR ++   S P+  ++R+ K+     L + RYR  S      S ++S S+ GFVGWY+ 
Sbjct: 41  QWRRFYC--SRPLS-KIRDPKIFRSFNLSS-RYRSHSHSFSSFSSNSSSSKFGFVGWYLG 100

Query: 93  KLDTHPFITKSITSSLIYGASDLTSQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWF 152
           KL++HP  TK I+SSLIY A+DLTSQMIT+P  GS D IRT RM  YG+LILGPSQH WF
Sbjct: 101 KLESHPLTTKGISSSLIYVAADLTSQMITLPPSGSIDSIRTLRMAVYGMLILGPSQHYWF 160

Query: 153 NFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLQVGSESP 195
           NF+S I P RD L+T KK+F+GQA+YGP+ T++FFSYNA+LQ G + P
Sbjct: 161 NFLSRILPKRDALTTLKKIFMGQAIYGPLTTTIFFSYNAALQ-GKQKP 203

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BLAST of CmoCh05G001500 vs. TAIR10
Match: AT5G43140.1 (AT5G43140.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.8e-40
Identity = 84/185 (45.41%), Postives = 118/185 (63.78%), Query Frame = 1


Query: 57  PTILETIRYRFFSSVSASKSRIGFVGWYMRKLDTHPFITKSITSSLIYGASDLTSQMITM 116
           P +    R     + S+S  +  F+ WY+RKL++HPF+TKSIT+S+IY A+DLTSQMITM
Sbjct: 55  PRVFSVSRNLTTKASSSSSKQPAFLRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITM 114

Query: 117 PSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPII 176
              GSFDLIRT RM ++GL+ LGPSQHLWF+++S I P RD+L+TFKK+ +GQ ++GP+ 
Sbjct: 115 EPTGSFDLIRTARMASFGLIFLGPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVS 174

Query: 177 TSVFFSYNASLQVGSESPSGFIGSTNHELM-------------EFITFCSNVTPVTQAVK 229
            +VF+SYNA+LQ   E+    +     +L+             +F+TF     PV     
Sbjct: 175 NTVFYSYNAALQ--GENSEEIVARLKRDLLPTLKNGLMYWPVCDFVTF--KYVPVHLQPL 234

[Close]

BLAST of CmoCh05G001500 vs. TAIR10
Match: AT2G14860.1 (AT2G14860.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 159.1 bits (401), Expect = 5.3e-39
Identity = 91/184 (49.46%), Postives = 118/184 (64.13%), Query Frame = 1


Query: 40  FGSSPMRFRVRESKV-PCPTILETIRYRFFSSVSASKSRIGFVGWYMRKLDTHPFITKSI 99
           F S  +  R +E+ V P P++        FSS S+S SRIGFVGWY+  + +HP +TKS+
Sbjct: 40  FRSRQLLERAKETGVSPSPSL-------GFSS-SSSPSRIGFVGWYLGMVKSHPVVTKSV 99

Query: 100 TSSLIYGASDLTSQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDL 159
           TSSLIY A+DL+SQ I   S  S+DL+RT RM  YGL +LGP+ H WFNFMS + P +DL
Sbjct: 100 TSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLHYWFNFMSRLFPKQDL 159

Query: 160 LSTFKKMFLGQAVYGPIITSVFFSYNASLQVGSES-----------PSGFIGSTNHELME 212
           ++TFKKM +GQ +YGPI+T +FFS NASLQ    S           P+ F G     L +
Sbjct: 160 ITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARLKRDLLPALFNGVMYWPLCD 215

[Close]

BLAST of CmoCh05G001500 vs. TAIR10
Match: AT4G33905.1 (AT4G33905.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-35
Identity = 80/154 (51.95%), Postives = 102/154 (66.23%), Query Frame = 1


Query: 69  SSVSASKSRIGFVGWYMRKLDTHPFITKSITSSLIYGASDLTSQMITMPSPGSFDLIRTT 128
           SS S++ S  GF+GWY+  + + P +TKS+TSSLIY A+DL+SQ I   S  S+DL+RT 
Sbjct: 71  SSSSSTVSTAGFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTA 130

Query: 129 RMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLQ 188
           RM  YGLLILGP+ H WFN MS++ P RDL++TFKKM +GQ VYGP +  VFFS NA+LQ
Sbjct: 131 RMGGYGLLILGPTLHYWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQ 190

Query: 189 --VGSE---------SPSGFIGSTNHELMEFITF 212
              GSE          P+   G     L +FITF
Sbjct: 191 GENGSEIVARLKRDLLPTMLNGVMYWPLCDFITF 224

[Close]

BLAST of CmoCh05G001500 vs. TAIR10
Match: AT5G19750.1 (AT5G19750.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-10
Identity = 34/108 (31.48%), Postives = 55/108 (50.93%), Query Frame = 1


Query: 81  VGWYMRKLDTHPFITKSITSSLIYGASDLTSQMITMPSPGSFDLIRTTRMTAYGLLILGP 140
           + WY   L   P +TK++T++L+    DL  Q +T+    S D  RT   T  GL ++GP
Sbjct: 115 LSWYQALLSNSPVLTKAVTAALLNLVGDLICQ-LTINKTSSLDKKRTLTFTFLGLGLVGP 174

Query: 141 SQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLQ 189
           + H W+ ++S +     L     ++ L Q V+ PI   VF S   +L+
Sbjct: 175 TLHFWYLYLSKVVTASGLSGAVIRLLLDQFVFAPIFVGVFLSAVVTLE 221

[Close]

BLAST of CmoCh05G001500 vs. TAIR10
Match: AT2G42770.1 (AT2G42770.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-06
Identity = 25/74 (33.78%), Postives = 40/74 (54.05%), Query Frame = 1


Query: 123 DLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFFS 182
           D IR  RM++YG L+ GP  + W+ F+    P     +   K+ L Q + GP + +V F+
Sbjct: 105 DWIRALRMSSYGFLLYGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFA 164

Query: 183 YNASLQVGSESPSG 197
           +N +L +G  S  G
Sbjct: 165 WN-NLWLGKLSELG 177

[Close]

BLAST of CmoCh05G001500 vs. NCBI nr
Match: gi|659087659|ref|XP_008444568.1| (PREDICTED: PXMP2/4 family protein 4 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 5.6e-75
Identity = 146/192 (76.04%), Postives = 166/192 (86.46%), Query Frame = 1


Query: 2   VNSLRRRCGWLLRPVVAHIDTTTKASVSAKIRWRSYFSFGSSPMRFRVRESKVPCPTILE 61
           +NSLRR C WLL PVVA+I+ +TKASVS+KI+WR+YFSFGSS MRF +RESK+  P+   
Sbjct: 1   MNSLRRTCSWLLLPVVANINISTKASVSSKIQWRAYFSFGSSSMRFTIRESKISSPSFST 60

Query: 62  TIRYRFFSSVSASKSRIGFVGWYMRKLDTHPFITKSITSSLIYGASDLTSQMITMPSPGS 121
             ++RF SS SA KS IGFVGWY+RK+DTHPFITKSIT+SLIY A+DLTSQ IT+ S GS
Sbjct: 61  HTQHRFSSSSSA-KSGIGFVGWYLRKVDTHPFITKSITASLIYAAADLTSQTITLSSSGS 120

Query: 122 FDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFF 181
           FDLIRTTRM AYGLLILGPSQHLWFNFMSTISP+RDL STF+K+FLGQAVYGPIITSVFF
Sbjct: 121 FDLIRTTRMAAYGLLILGPSQHLWFNFMSTISPSRDLFSTFRKIFLGQAVYGPIITSVFF 180

Query: 182 SYNASLQVGSES 194
           SYNASLQ  S S
Sbjct: 181 SYNASLQGESGS 191

[Close]

BLAST of CmoCh05G001500 vs. NCBI nr
Match: gi|449450271|ref|XP_004142887.1| (PREDICTED: PXMP2/4 family protein 4 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 9.6e-67
Identity = 134/192 (69.79%), Postives = 154/192 (80.21%), Query Frame = 1


Query: 2   VNSLRRRCGWLLRPVVAHIDTTTKASVSAKIRWRSYFSFGSSPMRFRVRESKVPCPTILE 61
           +NSLRR   WLL PVVA+I+ + KASVS KI+WR+Y SFGS PMRF  R +++  P+   
Sbjct: 1   MNSLRRSYSWLLLPVVANINISAKASVSPKIQWRAYLSFGSPPMRFTSRGNQIYSPSTQH 60

Query: 62  TIRYRFFSSVSASKSRIGFVGWYMRKLDTHPFITKSITSSLIYGASDLTSQMITMPSPGS 121
                 FSS S+SK  IGFVGWY+RK+DTHPFITK IT+SLIY A+DLTSQ IT+ S GS
Sbjct: 61  R-----FSSSSSSKPGIGFVGWYLRKVDTHPFITKGITASLIYAAADLTSQTITLSSSGS 120

Query: 122 FDLIRTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFF 181
           FDLIRT RM AYGLLILGPSQHLWFNFMSTISP+RD LSTF+K+FLGQAV+GP ITSVFF
Sbjct: 121 FDLIRTARMAAYGLLILGPSQHLWFNFMSTISPSRDFLSTFRKIFLGQAVFGPTITSVFF 180

Query: 182 SYNASLQVGSES 194
           SYNASLQ  S S
Sbjct: 181 SYNASLQGESGS 187

[Close]

BLAST of CmoCh05G001500 vs. NCBI nr
Match: gi|729335287|ref|XP_010538140.1| (PREDICTED: protein SYM1 [Tarenaya hassleriana])

HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 84/123 (68.29%), Postives = 104/123 (84.55%), Query Frame = 1


Query: 66  RFFSSVSASKSRIGFVGWYMRKLDTHPFITKSITSSLIYGASDLTSQMITMPSPGSFDLI 125
           R  ++ S+S S++GF+ WY+RKLD+HPFITKSIT+SLIY A+DLTSQMI MP  GSFDLI
Sbjct: 70  RLSTNCSSSSSKVGFLRWYLRKLDSHPFITKSITTSLIYAAADLTSQMIMMPPSGSFDLI 129

Query: 126 RTTRMTAYGLLILGPSQHLWFNFMSTISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNA 185
           RT+RM +YGLL LGPSQHLWFNF+STI P RD+ +T KK+ +GQA+YGP   +VFFSYNA
Sbjct: 130 RTSRMASYGLLFLGPSQHLWFNFLSTILPKRDVRTTLKKIIMGQAIYGPCANTVFFSYNA 189

Query: 186 SLQ 189
           +LQ
Sbjct: 190 ALQ 192

[Close]

BLAST of CmoCh05G001500 vs. NCBI nr
Match: gi|302142216|emb|CBI19419.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 176.4 bits (446), Expect = 9.0e-41
Identity = 98/210 (46.67%), Postives = 130/210 (61.90%), Query Frame = 1


Query: 31  KIRWRSYFSFGSSPMRFRVRESKVPCPTILETIRYRFFSSVSASKSRIGFVGWYMRKLDT 90
           KI+  +  SF S      +R S++  P  +  +  R FSS S+  S+IGF+GWY+  L+T
Sbjct: 55  KIKTSTPSSFASVHQLRNIRNSEISRP--INLLSSRSFSSSSSRSSKIGFLGWYLGMLET 114

Query: 91  HPFITKSITSSLIYGASDLTSQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMS 150
            P ITKS+TSSLI+ A+DLTSQ I +P  GSFD IRT RMT YGLLILGPSQHLWFNF++
Sbjct: 115 SPLITKSVTSSLIFAAADLTSQKIMLPPSGSFDPIRTLRMTGYGLLILGPSQHLWFNFVA 174

Query: 151 TISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLQVGSES-----------PSGFIG 210
            + P RD+++T KK+ +GQA++GP I SVFFS NA+LQ  S             P+   G
Sbjct: 175 KVLPKRDVITTLKKIIMGQAIFGPCINSVFFSVNAALQGESGDEIVARLKRDLLPTQLNG 234

Query: 211 STNHELMEFITFCSNVTPVTQAVKYNSECT 230
                + +F+TF     PV      NS C+
Sbjct: 235 LLYWPICDFVTF--RFVPVHLQPLMNSSCS 260

[Close]

BLAST of CmoCh05G001500 vs. NCBI nr
Match: gi|225458806|ref|XP_002283290.1| (PREDICTED: PXMP2/4 family protein 4 [Vitis vinifera])

HSP 1 Score: 176.4 bits (446), Expect = 9.0e-41
Identity = 98/210 (46.67%), Postives = 130/210 (61.90%), Query Frame = 1


Query: 31  KIRWRSYFSFGSSPMRFRVRESKVPCPTILETIRYRFFSSVSASKSRIGFVGWYMRKLDT 90
           KI+  +  SF S      +R S++  P  +  +  R FSS S+  S+IGF+GWY+  L+T
Sbjct: 17  KIKTSTPSSFASVHQLRNIRNSEISRP--INLLSSRSFSSSSSRSSKIGFLGWYLGMLET 76

Query: 91  HPFITKSITSSLIYGASDLTSQMITMPSPGSFDLIRTTRMTAYGLLILGPSQHLWFNFMS 150
            P ITKS+TSSLI+ A+DLTSQ I +P  GSFD IRT RMT YGLLILGPSQHLWFNF++
Sbjct: 77  SPLITKSVTSSLIFAAADLTSQKIMLPPSGSFDPIRTLRMTGYGLLILGPSQHLWFNFVA 136

Query: 151 TISPTRDLLSTFKKMFLGQAVYGPIITSVFFSYNASLQVGSES-----------PSGFIG 210
            + P RD+++T KK+ +GQA++GP I SVFFS NA+LQ  S             P+   G
Sbjct: 137 KVLPKRDVITTLKKIIMGQAIFGPCINSVFFSVNAALQGESGDEIVARLKRDLLPTQLNG 196

Query: 211 STNHELMEFITFCSNVTPVTQAVKYNSECT 230
                + +F+TF     PV      NS C+
Sbjct: 197 LLYWPICDFVTF--RFVPVHLQPLMNSSCS 222

The following BLAST results are available for this feature:

BLAST of CmoCh05G001500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYM1_GIBZE	2.0e-08	27.68	Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL ...	[more]
SYM1_NEUCR	5.9e-08	26.13	Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 ...	[more]

BLAST of CmoCh05G001500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL22_CUCSA	6.7e-67	69.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354840 PE=3 SV=1	[more]
F6GZN2_VITVI	6.3e-41	46.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g09300 PE=3 SV=...	[more]
I3SB40_LOTJA	1.4e-40	51.98	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A5ARH5_VITVI	2.4e-40	51.14	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002029 PE=3 SV=1	[more]
A0A067H1E4_CITSI	3.1e-40	54.17	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024491mg PE=3 SV=1	[more]

BLAST of CmoCh05G001500 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43140.1	2.8e-40	45.41	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G14860.1	5.3e-39	49.46	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G33905.1	1.6e-35	51.95	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G19750.1	1.0e-10	31.48	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G42770.1	1.2e-06	33.78	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

BLAST of CmoCh05G001500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659087659\|ref\|XP_008444568.1\|	5.6e-75	76.04	PREDICTED: PXMP2/4 family protein 4 [Cucumis melo]	[more]
gi\|449450271\|ref\|XP_004142887.1\|	9.6e-67	69.79	PREDICTED: PXMP2/4 family protein 4 [Cucumis sativus]	[more]
gi\|729335287\|ref\|XP_010538140.1\|	1.6e-42	68.29	PREDICTED: protein SYM1 [Tarenaya hassleriana]	[more]
gi\|302142216\|emb\|CBI19419.3\|	9.0e-41	46.67	unnamed protein product [Vitis vinifera]	[more]
gi\|225458806\|ref\|XP_002283290.1\|	9.0e-41	46.67	PREDICTED: PXMP2/4 family protein 4 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007248	Mpv17_PMP22

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G001500.1	CmoCh05G001500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 69..188 score: 1.8E-96coord: 235..273 score: 1.8
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 236..278 score: 6.
None	No IPR available	PANTHER	PTHR11266:SF43	SUBFAMILY NOT NAMED	coord: 235..273 score: 1.8E-96coord: 69..188 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G001500	Cucsa.395720	Cucumber (Gy14) v1	cgycmoB1093
CmoCh05G001500	CmaCh05G001490	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G001500	CmaCh12G005910	Cucurbita maxima (Rimu)	cmacmoB199
CmoCh05G001500	Cla022618	Watermelon (97103) v1	cmowmB748
CmoCh05G001500	Csa2G354840	Cucumber (Chinese Long) v2	cmocuB777
CmoCh05G001500	MELO3C010815	Melon (DHL92) v3.5.1	cmomeB718
CmoCh05G001500	ClCG08G016380	Watermelon (Charleston Gray)	cmowcgB716
CmoCh05G001500	CSPI02G18630	Wild cucumber (PI 183967)	cmocpiB782
CmoCh05G001500	Lsi08G015170	Bottle gourd (USVL1VR-Ls)	cmolsiB731
CmoCh05G001500	Cp4.1LG11g01420	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G001500	Cp4.1LG07g05010	Cucurbita pepo (Zucchini)	cmocpeB750
CmoCh05G001500	MELO3C010815.2	Melon (DHL92) v3.6.1	cmomedB815
CmoCh05G001500	CsaV3_2G026230	Cucumber (Chinese Long) v3	cmocucB0918
CmoCh05G001500	Cla97C08G160090	Watermelon (97103) v2	cmowmbB802
CmoCh05G001500	Bhi04G000383	Wax gourd	cmowgoB0944
CmoCh05G001500	Carg11875	Silver-seed gourd	carcmoB0263
CmoCh05G001500	Carg16399	Silver-seed gourd	carcmoB0617

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh05G001500	CmoCh12G005300	Cucurbita moschata (Rifu)	cmocmoB156

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G001500	Melon (DHL92) v3.6.1	cmomedB826
CmoCh05G001500	Melon (DHL92) v3.6.1	cmomedB831
CmoCh05G001500	Silver-seed gourd	carcmoB0443
CmoCh05G001500	Silver-seed gourd	carcmoB1047
CmoCh05G001500	Cucumber (Chinese Long) v3	cmocucB0933
CmoCh05G001500	Cucumber (Chinese Long) v3	cmocucB0949
CmoCh05G001500	Watermelon (97103) v2	cmowmbB793
CmoCh05G001500	Wax gourd	cmowgoB0955
CmoCh05G001500	Wax gourd	cmowgoB0960
CmoCh05G001500	Cucurbita maxima (Rimu)	cmacmoB483
CmoCh05G001500	Cucurbita moschata (Rifu)	cmocmoB033
CmoCh05G001500	Cucurbita moschata (Rifu)	cmocmoB129
CmoCh05G001500	Cucurbita moschata (Rifu)	cmocmoB369
CmoCh05G001500	Cucumber (Gy14) v1	cgycmoB0969
CmoCh05G001500	Cucurbita maxima (Rimu)	cmacmoB062
CmoCh05G001500	Wild cucumber (PI 183967)	cmocpiB795
CmoCh05G001500	Cucumber (Chinese Long) v2	cmocuB792
CmoCh05G001500	Melon (DHL92) v3.5.1	cmomeB709
CmoCh05G001500	Melon (DHL92) v3.5.1	cmomeB729
CmoCh05G001500	Watermelon (Charleston Gray)	cmowcgB707
CmoCh05G001500	Watermelon (97103) v1	cmowmB753
CmoCh05G001500	Cucurbita pepo (Zucchini)	cmocpeB734
CmoCh05G001500	Cucurbita pepo (Zucchini)	cmocpeB740
CmoCh05G001500	Bottle gourd (USVL1VR-Ls)	cmolsiB714
CmoCh05G001500	Bottle gourd (USVL1VR-Ls)	cmolsiB715
CmoCh05G001500	Cucumber (Gy14) v2	cgybcmoB238
CmoCh05G001500	Cucumber (Gy14) v2	cgybcmoB533
CmoCh05G001500	Cucumber (Gy14) v2	cgybcmoB953