Cp4.1LG11g00010 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g00010
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger CCCH domain-containing protein
LocationCp4.1LG11 : 489610 .. 490530 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAACGAATCAATGTTTCTCAATCTCACGCCTCACATTTCATCCTGGGACTCCCTCGACGATCCCGCCGCCGCAATCCCATCCTATTTCACCGCGGGCAACGTGTCGCCGCTCGATTCGCCGACGGCGGCGGTTATGGACTACGATTCATCTCTCTGGGAGGATCAAGACTTGCCGGCCATTGTGGACGCCTTCACGTGCGACCATTTCCGGATGTACGAGTTCAAAGTCCGCGCGTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCCTACGCCCACGCCGGCGAAAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAACTATTCCGGCACCGAGTGTCCGGATTTACGTCATGGGTGTTGTATGAAAGGAGACGCTTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCTGATCGGTACCGGACTCAGCCGTGCCGTGACGGAGCAGGCTGCCGAAGGCGGGTCTGTTTCTTCGCTCACTCGTCGGAGCAACTCCGAATCCCAGGGAAACAGAGCATCAGGTCTCCCCGAGGCAGGGAAATCACCGCCTCTGCCGTATCATCTCCGACGTCCATCCTAATATCATCATCGTCAGACTCGCCGCCTATGTCTCCGATCAGCCCTTTAACCACCGGTGGGGAATCATTCAGTAGATTAGTCGCATTGATGCACAATCTCCACTTCGATGAATTAAAAACGAATCCGGGGATCTCCGGCTTCGGTCCAAATTTCCGACGAAACTCCGGCGCATTTGATTCATGGGACAGAGATAACGAAGAAGAACCAGCAATGGAGAGAGTAGAATCAGGGAGAAACCTACGAGCCCAAATGTACGCGAAATTGATGAGAGAGAACTCGGTGGAGCGTGTCCGGCCGCTGATATTGGCCGGATCTCGGAACTAA

mRNA sequence

ATGATTAACGAATCAATGTTTCTCAATCTCACGCCTCACATTTCATCCTGGGACTCCCTCGACGATCCCGCCGCCGCAATCCCATCCTATTTCACCGCGGGCAACGTGTCGCCGCTCGATTCGCCGACGGCGGCGGTTATGGACTACGATTCATCTCTCTGGGAGGATCAAGACTTGCCGGCCATTGTGGACGCCTTCACGTGCGACCATTTCCGGATGTACGAGTTCAAAGTCCGCGCGTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCCTACGCCCACGCCGGCGAAAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAACTATTCCGGCACCGAGTGTCCGGATTTACGTCATGGGTGTTGTATGAAAGGAGACGCTTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCTGATCGGTACCGGACTCAGCCGTGCCGTGACGGAGCAGGCTGCCGAAGGCGGGTCTGTTTCTTCGCTCACTCGTCGGAGCAACTCCGAATCCCAGGGAAACAGAGCATCAGGTCTCCCCGAGGCAGGGAAATCACCGCCTCTGCCGTATCATCTCCGACGTCCATCCTAATATCATCATCGTCAGACTCGCCGCCTATGTCTCCGATCAGCCCTTTAACCACCGGTGGGGAATCATTCAGTAGATTAGTCGCATTGATGCACAATCTCCACTTCGATGAATTAAAAACGAATCCGGGGATCTCCGGCTTCGGTCCAAATTTCCGACGAAACTCCGGCGCATTTGATTCATGGGACAGAGATAACGAAGAAGAACCAGCAATGGAGAGAGTAGAATCAGGGAGAAACCTACGAGCCCAAATGTACGCGAAATTGATGAGAGAGAACTCGGTGGAGCGTGTCCGGCCGCTGATATTGGCCGGATCTCGGAACTAA

Coding sequence (CDS)

ATGATTAACGAATCAATGTTTCTCAATCTCACGCCTCACATTTCATCCTGGGACTCCCTCGACGATCCCGCCGCCGCAATCCCATCCTATTTCACCGCGGGCAACGTGTCGCCGCTCGATTCGCCGACGGCGGCGGTTATGGACTACGATTCATCTCTCTGGGAGGATCAAGACTTGCCGGCCATTGTGGACGCCTTCACGTGCGACCATTTCCGGATGTACGAGTTCAAAGTCCGCGCGTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCCTACGCCCACGCCGGCGAAAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAACTATTCCGGCACCGAGTGTCCGGATTTACGTCATGGGTGTTGTATGAAAGGAGACGCTTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCTGATCGGTACCGGACTCAGCCGTGCCGTGACGGAGCAGGCTGCCGAAGGCGGGTCTGTTTCTTCGCTCACTCGTCGGAGCAACTCCGAATCCCAGGGAAACAGAGCATCAGGTCTCCCCGAGGCAGGGAAATCACCGCCTCTGCCGTATCATCTCCGACGTCCATCCTAATATCATCATCGTCAGACTCGCCGCCTATGTCTCCGATCAGCCCTTTAACCACCGGTGGGGAATCATTCAGTAGATTAGTCGCATTGATGCACAATCTCCACTTCGATGAATTAAAAACGAATCCGGGGATCTCCGGCTTCGGTCCAAATTTCCGACGAAACTCCGGCGCATTTGATTCATGGGACAGAGATAACGAAGAAGAACCAGCAATGGAGAGAGTAGAATCAGGGAGAAACCTACGAGCCCAAATGTACGCGAAATTGATGAGAGAGAACTCGGTGGAGCGTGTCCGGCCGCTGATATTGGCCGGATCTCGGAACTAA

Protein sequence

MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLPAIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREITASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLILAGSRN
Homology
[Close]
BLAST of Cp4.1LG11g00010 vs. Swiss-Prot
Match: C3H20_ARATH (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.4e-72
Identity = 155/339 (45.72%), Postives = 194/339 (57.23%), Query Frame = 1 

Query: 1   MINES-MFLNLTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDL 60
           MI ES    N T HI  W   +D   +   Y +    S +    A +  Y  S   D D 
Sbjct: 2   MIGESHRGFNPTVHIPPWPLSEDLTVS-DIYGSPDGGSSMMEALAELQRYLPSNEPDPDS 61

Query: 61  P-------AIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYS 120
                   + +DA+TCDHFRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF+YS
Sbjct: 62  DPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYS 121

Query: 121 GTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLR 180
           GT CP+ R GCC +GDACE++HGVFE WLHP RYRTQPC+DG  CRRRVCFFAHS +Q+R
Sbjct: 122 GTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIR 181

Query: 181 IPGKQSIRSPRGREITASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSR-------- 240
           +   QS       ++ +  +       IS SS+SPP+SP     +     SR        
Sbjct: 182 VLPNQSPDRVDSFDVLSPTIRRAFQFSISPSSNSPPVSPRGDSDSSCSLLSRSLGSNLGN 241

Query: 241 -LVALMHNLHFDELKT------NPGISGF------------GPNFR------RNSGAFDS 299
            +VA + NL  +++K+      N  I G+            GP FR         G  + 
Sbjct: 242 DVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGFGSPRGSVLGPGFRSLPTTPTRPGFMNI 301

[Close]
BLAST of Cp4.1LG11g00010 vs. Swiss-Prot
Match: C3H23_ARATH (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.2e-66
Identity = 147/316 (46.52%), Postives = 196/316 (62.03%), Query Frame = 1 

Query: 11  TPHISSWDSLDDPAAAIPSYFTAGNVSPLD----SPT------AAVMDY--DSSLWEDQD 70
           T HI  WD ++DP A I S F++ N++ ++    SP+      A++  Y   + L  D D
Sbjct: 13  TIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTNDSD 72

Query: 71  LPA------IVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYS 130
             +      + D+F+ D FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+YS
Sbjct: 73  SSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYS 132

Query: 131 GTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLR 190
           GT CP+ R G C +GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAH++EQLR
Sbjct: 133 GTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLR 192

Query: 191 IPGKQSIRSPRGREITASAVSSPTSILISSS----SDSPPMSPISPLTTGGESFSRLVAL 250
           +    S+    G    +   +SPTSIL+S S    S+SPP+SP         S   L+A 
Sbjct: 193 VL-PCSLDPDLG--FFSGLATSPTSILVSPSFSPPSESPPLSP---------STGELIAS 252

Query: 251 MHNLHFDE---LKTNPGISG----FGPNFRRNSGAFDSWDR----DNEEEPAMERVESGR 294
           M  +  +      ++P  S     F  + R    A  +W R    + EE PAME VESG+
Sbjct: 253 MRKMQLNGGGCSWSSPMRSAVRLPFSSSLRPIQAA--TWPRIREFEIEEAPAMEFVESGK 312

[Close]
BLAST of Cp4.1LG11g00010 vs. Swiss-Prot
Match: C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-65
Identity = 133/263 (50.57%), Postives = 165/263 (62.74%), Query Frame = 1 

Query: 63  VDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHG 122
           +DA++CDHFRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK++YSGT CPD R G
Sbjct: 72  IDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKG 131

Query: 123 CCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSP 182
            C KGD+CE+AHGVFE WLHP RYRTQPC+DG  C R++CFFAHS +QLR    +S    
Sbjct: 132 GCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLRFLHTRSPDRV 191

Query: 183 RGREITASAVSSPTSILISSSSDSPPMSP-----ISPLT------TGGESFSRLVALMHN 242
              ++++   +    + IS  S SPPMSP      SP+T       G  S + +V    N
Sbjct: 192 DSFDVSSPIRARAFQLSISPVSGSPPMSPRADSESSPMTQSLSRSLGSCSINDVVPSFRN 251

Query: 243 LHFDELKT---NPGISGFG--------------PNFRRNSGAFDSWDRDNEEEPAMER-V 297
           L F+ +K+   N  + GFG              P      G  D W+   EEEP MER V
Sbjct: 252 LQFNSVKSFPRNNPLFGFGSPRGSILGPGFQSLPTTPTRPGNLDIWEYGLEEEPVMERVV 311

[Close]
BLAST of Cp4.1LG11g00010 vs. Swiss-Prot
Match: C3H2_ORYSJ (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.9e-56
Identity = 120/239 (50.21%), Postives = 151/239 (63.18%), Query Frame = 1 

Query: 44  AAVMDY----DSSLWEDQD-----LPAIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPY 103
           AA+ DY    D  +  D++     + A VDA+ CD FRMYEFKVR CARGRSHDWT+CP+
Sbjct: 41  AALRDYLPANDVGVGADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPF 100

Query: 104 AHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDG 163
           AH GEKARRRDPRK++YSGT CPD R G C +GDACEYAHGVFE WLHP RYRTQPC+DG
Sbjct: 101 AHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDG 160

Query: 164 AGCRRRVCFFAHSSEQLRI-PGKQSI--------------RSPRGREITASAV------S 223
             CRRRVCFFAH+ +QLR+ P +QS                SP  R+   S +      S
Sbjct: 161 TACRRRVCFFAHTPDQLRVLPAQQSSPRSVASSPLAESYDGSPLRRQAFESYLTKTIMSS 220

Query: 224 SPTSILI----SSSSDSPPMSP--ISPLTTG-----GESFSRLVALMHNLHFDELKTNP 242
           SPTS L+    S  S+SPP+SP   + +  G     G   + ++A    L  +++K++P
Sbjct: 221 SPTSTLMSPPKSPPSESPPLSPDGAAAIRRGSWPGVGSPVNDVLASFRQLRLNKVKSSP 279

[Close]
BLAST of Cp4.1LG11g00010 vs. Swiss-Prot
Match: C3H35_ORYSJ (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.0e-53
Identity = 106/187 (56.68%), Postives = 123/187 (65.78%), Query Frame = 1 

Query: 61  AIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLR 120
           A VDA+ CD FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPR++ YSGT CPD R
Sbjct: 68  AAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFR 127

Query: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRI---PGKQ 180
            G C +GDACE+AHGVFE WLHP RYRTQPC+DG  CRRRVCFFAH+ +QLR+     +Q
Sbjct: 128 KGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQ 187

Query: 181 SIRSPRG-----------------------REITASAV------SSPTSILI----SSSS 212
              SPRG                       R+   S +      SSPTS L+    S  S
Sbjct: 188 GSNSPRGCGGGGAGAAASPLAESYDGSPLRRQAFESYLTKSIMSSSPTSTLVSPPRSPPS 247

[Close]
BLAST of Cp4.1LG11g00010 vs. TrEMBL
Match: A0A0A0LNN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352420 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 5.9e-149
Identity = 254/307 (82.74%), Postives = 276/307 (89.90%), Query Frame = 1 

Query: 1   MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLP 60
           MI ESM LN T HIS+WDSLDDP+ AI SYF+  +VSPLDSPTAA+MD+DSSLWED DLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  AIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLR 120
           A VDA++CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKFNYSG ECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIR 180
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+R
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRGREITASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTN 240
           SPR RE+   AVSSPTSIL+S SSDSPP+SPISP+ +GGESFSRLVALMH+L  DELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGISGFGPNFRRNSG-AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPL 300
           PG+S F PN RR+SG AFD WDR+NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRP+
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ILAGSRN 307
           I AGS N
Sbjct: 301 ISAGSLN 307

[Close]
BLAST of Cp4.1LG11g00010 vs. TrEMBL
Match: Q5NDD3_CUCSA (Putative CCCH-type zinc finger protein CsSEF1 OS=Cucumis sativus GN=se2c5 PE=2 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 6.5e-148
Identity = 253/307 (82.41%), Postives = 274/307 (89.25%), Query Frame = 1 

Query: 1   MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLP 60
           MI ESM LN T HIS+WDSLDDP+ AI SYF+  +VSPLDSPTAA+MD+DSSLWED DLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  AIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLR 120
           A VDA++CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKFNYSG ECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIR 180
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+R
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRGREITASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTN 240
           SPR RE+   AVSSPTSIL+S SSDSPP+SPISP+ +GGES SRLVALMH+L  DELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESLSRLVALMHSLRLDELKTN 240

Query: 241 PGISGFGPNFRRNSG-AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPL 300
           PG+S F PN RR+SG AFD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRP+
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRGNEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ILAGSRN 307
           I AGS N
Sbjct: 301 ISAGSLN 307

[Close]
BLAST of Cp4.1LG11g00010 vs. TrEMBL
Match: F6H381_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00610 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.9e-78
Identity = 179/361 (49.58%), Postives = 211/361 (58.45%), Query Frame = 1 

Query: 1   MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVS---PLDSPTAA------VMDYDS 60
           MI E    N T  +  WD  DDP A + S F    V+      SPT        + +  S
Sbjct: 2   MIGEPTRSNPTVQVPPWDPYDDPTAGMGSPFPVSGVNFNGNAASPTGGDYNPFIISEAFS 61

Query: 61  SLWE-----------DQDLPAIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK 120
           SL               +   +VDAF+CD FRM+EFKVR CARGRSHDWT+CPYAH GEK
Sbjct: 62  SLQRYLPSNEFGTESGDESETVVDAFSCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEK 121

Query: 121 ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRR 180
           ARRRDPRKF+YSGT CP+ R G C KGD+CE+AHGVFE WLHP RYRTQPC+DG+GCRRR
Sbjct: 122 ARRRDPRKFHYSGTACPEFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCKDGSGCRRR 181

Query: 181 VCFFAHSSEQLRIPGKQSIRSPRGRE---------------ITASAVSSPTSILI----S 240
           VCFFAH+ EQLR+  +QS R+    E                  S +SSPTS LI    S
Sbjct: 182 VCFFAHTPEQLRVLPQQSPRNHGSAESYDGSPLRLAFDPYLSKGSFISSPTSTLISPPVS 241

Query: 241 SSSDSPPMSPISPLTTGG-ESFSRLVALMHNLHFDELKTNP---GI---SGFG------- 296
             SDSPPMSP SP  TG   S S LVA M NL   + K +P   G+   SGFG       
Sbjct: 242 PPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQVGKAKMSPQSWGVQMGSGFGSPRGSTL 301

[Close]
BLAST of Cp4.1LG11g00010 vs. TrEMBL
Match: A5BHR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036981 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.9e-78
Identity = 179/361 (49.58%), Postives = 211/361 (58.45%), Query Frame = 1 

Query: 1   MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVS---PLDSPTAA------VMDYDS 60
           MI E    N T  +  WD  DDP A + S F    V+      SPT        + +  S
Sbjct: 49  MIGEPTRSNPTVQVPPWDPYDDPTAGMGSPFPVSGVNFNGNAASPTGGDYNPFIISEAFS 108

Query: 61  SLWE-----------DQDLPAIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK 120
           SL               +   +VDAF+CD FRM+EFKVR CARGRSHDWT+CPYAH GEK
Sbjct: 109 SLQRYLPSNEFGTESGDESETVVDAFSCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEK 168

Query: 121 ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRR 180
           ARRRDPRKF+YSGT CP+ R G C KGD+CE+AHGVFE WLHP RYRTQPC+DG+GCRRR
Sbjct: 169 ARRRDPRKFHYSGTACPEFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCKDGSGCRRR 228

Query: 181 VCFFAHSSEQLRIPGKQSIRSPRGRE---------------ITASAVSSPTSILI----S 240
           VCFFAH+ EQLR+  +QS R+    E                  S +SSPTS LI    S
Sbjct: 229 VCFFAHTPEQLRVLPQQSPRNHGSAESYDGSPLRLAFDPYLSKGSFISSPTSTLISPPVS 288

Query: 241 SSSDSPPMSPISPLTTGG-ESFSRLVALMHNLHFDELKTNP---GI---SGFG------- 296
             SDSPPMSP SP  TG   S S LVA M NL   + K +P   G+   SGFG       
Sbjct: 289 PPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQVGKAKMSPQSWGVQMGSGFGSPRGSTL 348

[Close]
BLAST of Cp4.1LG11g00010 vs. TrEMBL
Match: A0A067KDD1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07708 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.5e-77
Identity = 177/343 (51.60%), Postives = 208/343 (60.64%), Query Frame = 1 

Query: 9   NLTPHISSWDSL-DDPAAAIPSYFT-AGNVSP--LDSPTAAVMDYDSSLWED--QDLPAI 68
           N T  I  WD   D+P + +PS F   GN S   LDS TA      S+  +    DL   
Sbjct: 11  NPTVQIPPWDPFFDEPTSPLPSPFANCGNTSSPFLDSLTALHRYLPSNEPDSLSDDLDFA 70

Query: 69  VDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHG 128
           VDAF+CDHFRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPR+++YSGT CPD R G
Sbjct: 71  VDAFSCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRRYHYSGTACPDFRKG 130

Query: 129 CCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIR-- 188
            C KGD+CE+AHGVFE WLHP RYRTQPC+DG  CRRRVCFFAH+ +QLR+  +QS R  
Sbjct: 131 GCKKGDSCEFAHGVFECWLHPARYRTQPCKDGPACRRRVCFFAHTPDQLRVLPQQSPRGN 190

Query: 189 ----------SPRGREITA------SAVSSPTSIL----ISSSSDSPPMSPISPLTTGGE 248
                     SP    I +      S +SSPTSIL    +S  SDSPP+SP SP   GG 
Sbjct: 191 APGSVEMEVGSPLRHHIDSYLSKAGSFLSSPTSILTSPPMSPPSDSPPISPSSPQVVGGS 250

Query: 249 --SFSRLVALMHNLHFDELKTNPGI------SGFG--------PNF------------RR 296
             S S LVA M +L F ++K           SGFG        P+F            R 
Sbjct: 251 FNSVSELVASMRSLQFSKMKAGSASWGMQNGSGFGSPRGSSLRPSFCSLPSTPTRAMTRA 310

[Close]
BLAST of Cp4.1LG11g00010 vs. TAIR10
Match: AT2G19810.1 (AT2G19810.1 CCCH-type zinc finger family protein)

HSP 1 Score: 272.3 bits (695), Expect = 3.6e-73
Identity = 155/339 (45.72%), Postives = 194/339 (57.23%), Query Frame = 1 

Query: 1   MINES-MFLNLTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDL 60
           MI ES    N T HI  W   +D   +   Y +    S +    A +  Y  S   D D 
Sbjct: 2   MIGESHRGFNPTVHIPPWPLSEDLTVS-DIYGSPDGGSSMMEALAELQRYLPSNEPDPDS 61

Query: 61  P-------AIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYS 120
                   + +DA+TCDHFRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF+YS
Sbjct: 62  DPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYS 121

Query: 121 GTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLR 180
           GT CP+ R GCC +GDACE++HGVFE WLHP RYRTQPC+DG  CRRRVCFFAHS +Q+R
Sbjct: 122 GTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIR 181

Query: 181 IPGKQSIRSPRGREITASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSR-------- 240
           +   QS       ++ +  +       IS SS+SPP+SP     +     SR        
Sbjct: 182 VLPNQSPDRVDSFDVLSPTIRRAFQFSISPSSNSPPVSPRGDSDSSCSLLSRSLGSNLGN 241

Query: 241 -LVALMHNLHFDELKT------NPGISGF------------GPNFR------RNSGAFDS 299
            +VA + NL  +++K+      N  I G+            GP FR         G  + 
Sbjct: 242 DVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGFGSPRGSVLGPGFRSLPTTPTRPGFMNI 301

[Close]
BLAST of Cp4.1LG11g00010 vs. TAIR10
Match: AT2G25900.1 (AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 252.7 bits (644), Expect = 2.9e-67
Identity = 147/316 (46.52%), Postives = 196/316 (62.03%), Query Frame = 1 

Query: 11  TPHISSWDSLDDPAAAIPSYFTAGNVSPLD----SPT------AAVMDY--DSSLWEDQD 70
           T HI  WD ++DP A I S F++ N++ ++    SP+      A++  Y   + L  D D
Sbjct: 13  TIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTNDSD 72

Query: 71  LPA------IVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYS 130
             +      + D+F+ D FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+YS
Sbjct: 73  SSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYS 132

Query: 131 GTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLR 190
           GT CP+ R G C +GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAH++EQLR
Sbjct: 133 GTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLR 192

Query: 191 IPGKQSIRSPRGREITASAVSSPTSILISSS----SDSPPMSPISPLTTGGESFSRLVAL 250
           +    S+    G    +   +SPTSIL+S S    S+SPP+SP         S   L+A 
Sbjct: 193 VL-PCSLDPDLG--FFSGLATSPTSILVSPSFSPPSESPPLSP---------STGELIAS 252

Query: 251 MHNLHFDE---LKTNPGISG----FGPNFRRNSGAFDSWDR----DNEEEPAMERVESGR 294
           M  +  +      ++P  S     F  + R    A  +W R    + EE PAME VESG+
Sbjct: 253 MRKMQLNGGGCSWSSPMRSAVRLPFSSSLRPIQAA--TWPRIREFEIEEAPAMEFVESGK 312

[Close]
BLAST of Cp4.1LG11g00010 vs. TAIR10
Match: AT4G29190.1 (AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 251.1 bits (640), Expect = 8.5e-67
Identity = 133/263 (50.57%), Postives = 165/263 (62.74%), Query Frame = 1 

Query: 63  VDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHG 122
           +DA++CDHFRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK++YSGT CPD R G
Sbjct: 72  IDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKG 131

Query: 123 CCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSP 182
            C KGD+CE+AHGVFE WLHP RYRTQPC+DG  C R++CFFAHS +QLR    +S    
Sbjct: 132 GCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLRFLHTRSPDRV 191

Query: 183 RGREITASAVSSPTSILISSSSDSPPMSP-----ISPLT------TGGESFSRLVALMHN 242
              ++++   +    + IS  S SPPMSP      SP+T       G  S + +V    N
Sbjct: 192 DSFDVSSPIRARAFQLSISPVSGSPPMSPRADSESSPMTQSLSRSLGSCSINDVVPSFRN 251

Query: 243 LHFDELKT---NPGISGFG--------------PNFRRNSGAFDSWDRDNEEEPAMER-V 297
           L F+ +K+   N  + GFG              P      G  D W+   EEEP MER V
Sbjct: 252 LQFNSVKSFPRNNPLFGFGSPRGSILGPGFQSLPTTPTRPGNLDIWEYGLEEEPVMERVV 311

[Close]
BLAST of Cp4.1LG11g00010 vs. TAIR10
Match: AT2G41900.1 (AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain)

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-48
Identity = 100/199 (50.25%), Postives = 124/199 (62.31%), Query Frame = 1 

Query: 33  AGNVSPLDSP-TAAVMDYDSSLWEDQDLPAIVDA-FTCDHFRMYEFKVRACARGRSHDWT 92
           +G+ SPL SP      ++      D  LP I ++ +  D FRMY FKVR C+R  SHDWT
Sbjct: 222 SGSGSPLGSPFKLKSTEFKKEYPVDPSLPDIKNSIYATDEFRMYSFKVRPCSRAYSHDWT 281

Query: 93  KCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQP 152
           +CP+ H GE ARRRDPRKF+YS   CPD R G C +GD CEYAHGVFE WLHP +YRT+ 
Sbjct: 282 ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 341

Query: 153 CRDGAGCRRRVCFFAHSSEQLR---IPGKQSIRSPRGREITASAVSSPTSILISSSSDSP 212
           C+DG GC RRVCFFAH+ E+LR        ++ SPR     A+A+    S+L  S S   
Sbjct: 342 CKDGTGCARRVCFFAHTPEELRPLYASTGSAVPSPRSNADYAAAL----SLLPGSPSGVS 401

Query: 213 PMSPISPLTTG-GESFSRL 226
            MSP+SP   G G S S +
Sbjct: 402 VMSPLSPSAAGNGMSHSNM 416

[Close]
BLAST of Cp4.1LG11g00010 vs. TAIR10
Match: AT1G03790.1 (AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 185.3 bits (469), Expect = 5.8e-47
Identity = 95/177 (53.67%), Postives = 113/177 (63.84%), Query Frame = 1 

Query: 64  DAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRH-G 123
           D +  DHFRM+EFK+R C R RSHDWT CP+AH GEKARRRDPR+F YSG  CP+ R  G
Sbjct: 76  DPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGG 135

Query: 124 CCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLR------IPGK 183
            C +GD CE+AHGVFE WLHP RYRT+ C+DG  C+R+VCFFAHS  QLR      + G 
Sbjct: 136 DCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPENVSGV 195

Query: 184 QSIRSPRGRE-ITASAVSSPTSILIS-------SSSDSPPMSPISPLTTGGESFSRL 226
            +  SP  +        SSPTS L+        S S SPPMSP +       +FSRL
Sbjct: 196 SASPSPAAKNPCCLFCSSSPTSTLLGNLSHLSRSPSLSPPMSPANK----AAAFSRL 248

[Close]
BLAST of Cp4.1LG11g00010 vs. NCBI nr
Match: gi|659087535|ref|XP_008444505.1| (PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 [Cucumis melo])

HSP 1 Score: 545.4 bits (1404), Expect = 6.2e-152
Identity = 258/306 (84.31%), Postives = 277/306 (90.52%), Query Frame = 1 

Query: 1   MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLP 60
           MI ESM LN T HIS+WDSLDDP+AAI SYF+AG+VSPLDSPTAA+MD+DSSLWED DLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  AIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLR 120
           A VD F+CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKFNYSG ECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIR 180
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+R
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRGREITASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTN 240
           SPR REI   AVSSPTSIL+S SSDSPP+SPISP+ +GGES SRLVALMH+L  DE KTN
Sbjct: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESSSRLVALMHSLRLDEXKTN 240

Query: 241 PGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI 300
           PG+S F PN RRNSGAFD WDR+NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRPLI
Sbjct: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300

Query: 301 LAGSRN 307
            AGS+N
Sbjct: 301 SAGSQN 306

[Close]
BLAST of Cp4.1LG11g00010 vs. NCBI nr
Match: gi|700207293|gb|KGN62412.1| (hypothetical protein Csa_2G352420 [Cucumis sativus])

HSP 1 Score: 535.0 bits (1377), Expect = 8.4e-149
Identity = 254/307 (82.74%), Postives = 276/307 (89.90%), Query Frame = 1 

Query: 1   MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLP 60
           MI ESM LN T HIS+WDSLDDP+ AI SYF+  +VSPLDSPTAA+MD+DSSLWED DLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  AIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLR 120
           A VDA++CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKFNYSG ECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIR 180
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+R
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRGREITASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTN 240
           SPR RE+   AVSSPTSIL+S SSDSPP+SPISP+ +GGESFSRLVALMH+L  DELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGISGFGPNFRRNSG-AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPL 300
           PG+S F PN RR+SG AFD WDR+NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRP+
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ILAGSRN 307
           I AGS N
Sbjct: 301 ISAGSLN 307

[Close]
BLAST of Cp4.1LG11g00010 vs. NCBI nr
Match: gi|821595297|ref|NP_001295793.1| (zinc finger CCCH domain-containing protein 20 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 9.3e-148
Identity = 253/307 (82.41%), Postives = 274/307 (89.25%), Query Frame = 1 

Query: 1   MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLP 60
           MI ESM LN T HIS+WDSLDDP+ AI SYF+  +VSPLDSPTAA+MD+DSSLWED DLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  AIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLR 120
           A VDA++CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKFNYSG ECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIR 180
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+R
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRGREITASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTN 240
           SPR RE+   AVSSPTSIL+S SSDSPP+SPISP+ +GGES SRLVALMH+L  DELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESLSRLVALMHSLRLDELKTN 240

Query: 241 PGISGFGPNFRRNSG-AFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPL 300
           PG+S F PN RR+SG AFD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRP+
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRGNEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ILAGSRN 307
           I AGS N
Sbjct: 301 ISAGSLN 307

[Close]
BLAST of Cp4.1LG11g00010 vs. NCBI nr
Match: gi|147865633|emb|CAN83255.1| (hypothetical protein VITISV_036981 [Vitis vinifera])

HSP 1 Score: 300.8 bits (769), Expect = 2.7e-78
Identity = 179/361 (49.58%), Postives = 211/361 (58.45%), Query Frame = 1 

Query: 1   MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVS---PLDSPTAA------VMDYDS 60
           MI E    N T  +  WD  DDP A + S F    V+      SPT        + +  S
Sbjct: 49  MIGEPTRSNPTVQVPPWDPYDDPTAGMGSPFPVSGVNFNGNAASPTGGDYNPFIISEAFS 108

Query: 61  SLWE-----------DQDLPAIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK 120
           SL               +   +VDAF+CD FRM+EFKVR CARGRSHDWT+CPYAH GEK
Sbjct: 109 SLQRYLPSNEFGTESGDESETVVDAFSCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEK 168

Query: 121 ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRR 180
           ARRRDPRKF+YSGT CP+ R G C KGD+CE+AHGVFE WLHP RYRTQPC+DG+GCRRR
Sbjct: 169 ARRRDPRKFHYSGTACPEFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCKDGSGCRRR 228

Query: 181 VCFFAHSSEQLRIPGKQSIRSPRGRE---------------ITASAVSSPTSILI----S 240
           VCFFAH+ EQLR+  +QS R+    E                  S +SSPTS LI    S
Sbjct: 229 VCFFAHTPEQLRVLPQQSPRNHGSAESYDGSPLRLAFDPYLSKGSFISSPTSTLISPPVS 288

Query: 241 SSSDSPPMSPISPLTTGG-ESFSRLVALMHNLHFDELKTNP---GI---SGFG------- 296
             SDSPPMSP SP  TG   S S LVA M NL   + K +P   G+   SGFG       
Sbjct: 289 PPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQVGKAKMSPQSWGVQMGSGFGSPRGSTL 348

[Close]
BLAST of Cp4.1LG11g00010 vs. NCBI nr
Match: gi|225429416|ref|XP_002275926.1| (PREDICTED: zinc finger CCCH domain-containing protein 23 [Vitis vinifera])

HSP 1 Score: 300.8 bits (769), Expect = 2.7e-78
Identity = 179/361 (49.58%), Postives = 211/361 (58.45%), Query Frame = 1 

Query: 1   MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVS---PLDSPTAA------VMDYDS 60
           MI E    N T  +  WD  DDP A + S F    V+      SPT        + +  S
Sbjct: 2   MIGEPTRSNPTVQVPPWDPYDDPTAGMGSPFPVSGVNFNGNAASPTGGDYNPFIISEAFS 61

Query: 61  SLWE-----------DQDLPAIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEK 120
           SL               +   +VDAF+CD FRM+EFKVR CARGRSHDWT+CPYAH GEK
Sbjct: 62  SLQRYLPSNEFGTESGDESETVVDAFSCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEK 121

Query: 121 ARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRR 180
           ARRRDPRKF+YSGT CP+ R G C KGD+CE+AHGVFE WLHP RYRTQPC+DG+GCRRR
Sbjct: 122 ARRRDPRKFHYSGTACPEFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCKDGSGCRRR 181

Query: 181 VCFFAHSSEQLRIPGKQSIRSPRGRE---------------ITASAVSSPTSILI----S 240
           VCFFAH+ EQLR+  +QS R+    E                  S +SSPTS LI    S
Sbjct: 182 VCFFAHTPEQLRVLPQQSPRNHGSAESYDGSPLRLAFDPYLSKGSFISSPTSTLISPPVS 241

Query: 241 SSSDSPPMSPISPLTTGG-ESFSRLVALMHNLHFDELKTNP---GI---SGFG------- 296
             SDSPPMSP SP  TG   S S LVA M NL   + K +P   G+   SGFG       
Sbjct: 242 PPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQVGKAKMSPQSWGVQMGSGFGSPRGSTL 301

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g00010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H20_ARATH6.4e-7245.72Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana GN=At2g198... [more]
C3H23_ARATH5.2e-6646.52Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana GN=At2g259... [more]
C3H49_ARATH1.5e-6550.57Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g291... [more]
C3H2_ORYSJ2.9e-5650.21Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=... [more]
C3H35_ORYSJ3.0e-5356.68Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica GN... [more]
BLAST of Cp4.1LG11g00010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNN8_CUCSA5.9e-14982.74Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352420 PE=4 SV=1[more]
Q5NDD3_CUCSA6.5e-14882.41Putative CCCH-type zinc finger protein CsSEF1 OS=Cucumis sativus GN=se2c5 PE=2 S... [more]
F6H381_VITVI1.9e-7849.58Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00610 PE=4 SV=... [more]
A5BHR5_VITVI1.9e-7849.58Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036981 PE=4 SV=1[more]
A0A067KDD1_JATCU3.5e-7751.60Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07708 PE=4 SV=1[more]
BLAST of Cp4.1LG11g00010 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19810.13.6e-7345.72 CCCH-type zinc finger family protein[more]
AT2G25900.12.9e-6746.52 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT4G29190.18.5e-6750.57 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G41900.13.1e-4850.25 CCCH-type zinc finger protein with ARM repeat domain[more]
AT1G03790.15.8e-4753.67 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of Cp4.1LG11g00010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087535|ref|XP_008444505.1|6.2e-15284.31PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 [C... [more]
gi|700207293|gb|KGN62412.1|8.4e-14982.74hypothetical protein Csa_2G352420 [Cucumis sativus][more]
gi|821595297|ref|NP_001295793.1|9.3e-14882.41zinc finger CCCH domain-containing protein 20 [Cucumis sativus][more]
gi|147865633|emb|CAN83255.1|2.7e-7849.58hypothetical protein VITISV_036981 [Vitis vinifera][more]
gi|225429416|ref|XP_002275926.1|2.7e-7849.58PREDICTED: zinc finger CCCH domain-containing protein 23 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044271 cellular nitrogen compound biosynthetic process
biological_process GO:2000112 regulation of cellular macromolecule biosynthetic process
biological_process GO:0010468 regulation of gene expression
biological_process GO:0051171 regulation of nitrogen compound metabolic process
biological_process GO:0080090 regulation of primary metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g00010.1Cp4.1LG11g00010.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 145..168
score: 26.0coord: 110..136
score: 0
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 110..137
score: 11.263coord: 145..169
score: 7
NoneNo IPR availablePANTHERPTHR14493UNCHARACTERIZEDcoord: 61..293
score: 3.1
NoneNo IPR availablePANTHERPTHR14493:SF41SUBFAMILY NOT NAMEDcoord: 61..293
score: 3.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g00010Cucsa.353170Cucumber (Gy14) v1cgycpeB0919
Cp4.1LG11g00010Cucsa.395310Cucumber (Gy14) v1cgycpeB1039
Cp4.1LG11g00010CmaCh05G001120Cucurbita maxima (Rimu)cmacpeB766
Cp4.1LG11g00010CmaCh09G003260Cucurbita maxima (Rimu)cmacpeB030
Cp4.1LG11g00010CmaCh12G006220Cucurbita maxima (Rimu)cmacpeB179
Cp4.1LG11g00010CmoCh01G018150Cucurbita moschata (Rifu)cmocpeB420
Cp4.1LG11g00010CmoCh09G003240Cucurbita moschata (Rifu)cmocpeB006
Cp4.1LG11g00010CmoCh12G005600Cucurbita moschata (Rifu)cmocpeB154
Cp4.1LG11g00010CmoCh05G001180Cucurbita moschata (Rifu)cmocpeB720
Cp4.1LG11g00010Cla022659Watermelon (97103) v1cpewmB101
Cp4.1LG11g00010Cla020897Watermelon (97103) v1cpewmB110
Cp4.1LG11g00010Csa2G352420Cucumber (Chinese Long) v2cpecuB096
Cp4.1LG11g00010MELO3C016852Melon (DHL92) v3.5.1cpemeB107
Cp4.1LG11g00010MELO3C010774Melon (DHL92) v3.5.1cpemeB091
Cp4.1LG11g00010ClCG05G017680Watermelon (Charleston Gray)cpewcgB115
Cp4.1LG11g00010ClCG08G016820Watermelon (Charleston Gray)cpewcgB125
Cp4.1LG11g00010CSPI04G25130Wild cucumber (PI 183967)cpecpiB112
Cp4.1LG11g00010CSPI02G18220Wild cucumber (PI 183967)cpecpiB092
Cp4.1LG11g00010Lsi08G015600Bottle gourd (USVL1VR-Ls)cpelsiB100
Cp4.1LG11g00010Lsi04G014430Bottle gourd (USVL1VR-Ls)cpelsiB085
Cp4.1LG11g00010MELO3C010774.2Melon (DHL92) v3.6.1cpemedB115
Cp4.1LG11g00010MELO3C016852.2Melon (DHL92) v3.6.1cpemedB132
Cp4.1LG11g00010CsaV3_4G035420Cucumber (Chinese Long) v3cpecucB0127
Cp4.1LG11g00010CsaV3_2G025800Cucumber (Chinese Long) v3cpecucB0106
Cp4.1LG11g00010Bhi09G002606Wax gourdcpewgoB0157
Cp4.1LG11g00010Bhi04G000432Wax gourdcpewgoB0141
Cp4.1LG11g00010CsGy4G023430Cucumber (Gy14) v2cgybcpeB478
Cp4.1LG11g00010Carg10671Silver-seed gourdcarcpeB1078
Cp4.1LG11g00010Carg21747Silver-seed gourdcarcpeB0446
Cp4.1LG11g00010Carg11908Silver-seed gourdcarcpeB0263
Cp4.1LG11g00010Carg23979Silver-seed gourdcarcpeB0975
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG11g00010Cp4.1LG02g06310Cucurbita pepo (Zucchini)cpecpeB125
Cp4.1LG11g00010Cp4.1LG06g02240Cucurbita pepo (Zucchini)cpecpeB136
Cp4.1LG11g00010Cp4.1LG07g06240Cucurbita pepo (Zucchini)cpecpeB146
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g00010Melon (DHL92) v3.6.1cpemedB103
Cp4.1LG11g00010Cucumber (Chinese Long) v3cpecucB0141
Cp4.1LG11g00010Cucurbita maxima (Rimu)cmacpeB460
Cp4.1LG11g00010Cucumber (Chinese Long) v2cpecuB116
Cp4.1LG11g00010Cucumber (Gy14) v2cgybcpeB161