Cp4.1LG10g12550 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g12550
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRas-related protein
LocationCp4.1LG10 : 9510770 .. 9514515 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGGTTCGAACCATAGATCAAGTGGTTCATAAAGTTTCTATATTTATAGGATTTGCCAGCTCGAAGTCAGACATCGTAATTCCATTCCAACACGCAGAGGCGTCCCTTTGCCTTGCCTCGCTTCGTTGGAGCTTCGCAATTGAAACTCCTCTACGGTTTCTCTCTACGTTTCCCCCTTTTTCTTCCGCCGATTCACCATTCCAGACCAATTCTCTTCTGTACACTCGATTCCTCTCGCGGCGGCTTGTGTTTTGCTCTTCGATTTCGACCGGAATGTCATACGCCTACCTTTTCAAGTACATCATTATTGGTGATACTGGTACGCCTTTGTATCTATCTGGTTTTCGTTTTGGATCTGGTTTCTGAATTAGGTCGTTTTGATTATGTGTTGATTTGTGCTTAATCTACGTGGTTGATCTGTCTGTCTGATTTGTGGATGTCAACGCTTCTTTTTAATTTGAGAATTTTCTTGCGATTGAGGGGTTTCTTCCGACTTTTGATTGTGTATATTCTTCAGGAGTTGGAAAATCATGTCTTCTTCTCCAATTTACCGATAAGCGATTCCAGCCTGTTCATGACTTGACTATTGGTGTCGAGTTTGGTGCTAGGATGATCACCATTGATAGCAAGCCAATCAAGTTGCAAATATGGGATACGGTTAGCTATCTCTCTTTCATCTCTTCCTTTTCTTTTATTGAACTGAATGAGTTCTATTCTGGTTTATGAATCTGTACGCTACCTAATCTAGGATCCGTCTAAGGGAAAATCATCCCTTAGACGAGTGGGTGATCTTCTGCTATAAGCTTAAATCTTGGTTCAAATAAAATGCACAAACAAGAACTTGTAGTAAAACCAGGAAATCTCCATTCATGCTACTATATAGAGTTCATACTATCTATGAGACTTATATTGATGTCAAGTTTCCCAAAAATTTTACAGGCTGGTCAAGAATCTTTCAGGTCTATTACAAGGTCCTATTATAGAGGGGCTGCTGGAGCATTGCTTGTCTATGACATTACCAGGTCTTGTTTCCTCTTTGTTCCTTCCTAAATTAATACTACTTTCGAGTTTTGATGTAGGAATATTACTGTACTTTAGTGATTTGTGTTTGTTGCCTTCTGTAGCCGTTGGGTTGTGACCGTGAGTATGTTAACTTTCACAGTTCATTATTGATCTTTTCCGAGGAACCTAATATTCAATGTATTAAAACAGTCATCTTGAAGTTGCAATATAATTCGTGTTGGGAGTGAGAGTTCGTTAAAATTCCTCAGTCGCAGGAAACTTAGTACTTCTCATGTCACAGGAAACTTAGTACTTCATGAGAGTAACAAGAGTTTGCCAGAGAGATTATTGGTTAATGGAACTGACCAATGTGTTAGCTGAATGCTGTTCGCAGTAGATTATTAGTTGTGGTATGTTTTTGTGAGATCCCACATCGGTTGGGGAGGAGAATGAAGCATTCTTTATAAGGATGTGGAAACCTCTCTCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAGGCCCAAAGAAGACAATATCTGCTAGTGATTGGCTTGAACCGTTACAAATGGTATCAGAGCCAGACACCAGGCGATGTGCCAGCAAGGAAGCTGAGACACGAGGCGGTGTGCCAGCAAGGACGCTGGGCCTCGAAAGGGGGTGGATTGGAGGGTCCCACATTGATTGGAGAAGGGAACGAGTTCCAGCGAGGACGTTGAGACCCCAAGGAGGGTGGACTGTAAGATCCCACATCGGTTGAGGAGAAGAACGAAGTATTCTTTATAAGGGTGTGGAAACCTCTCCCCAGCAGACACTTTTTAAAAACCTTAAGAAGAAACTCGAAAGAGAAAGCCTAAAGAGGACAATATTTACTAGTGATGGGCTTGGGCTGTTATAGTTTTTGTCTTGTATAGTGTTGGTTTGTGCGAATAACATAAGCAAGACCATAATTGTTAAAATAATGCAGTCACTCAGATTTGACAATAGTTCTTACCTGTTTCAACTGCCTGAAGTTTGATGTGATTCATTCTACCTTCTAATTTAATTTGATATACTGTATAAGCTGAAATGGGGCCTCATACTTTAAATTTATTGAGTCAATGAGGATCTCAGACTGAAGGTTATGTGGCTATCATTTTTTTCAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGCAACAAGTGTGATCTTGCGCACAGAAGGGCTGTCAGCACCGAGGAAGGAGAGCAGTTTGCAAAGGAGCACGGTTTAATCTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGTGATAGAATATGACGTGTAGATTTATAATATTCAATTTTTTTATCTCACAATTCTCCTGATGACCAATCATTTTTAACAGGCATTCATAAAAACTGCTGCGACCATTTATAAGAAGATCCAGGAGGGAGTATTTGATGTATCTAATGAGGTATGCAGTCTGCCTTAACTTATTGCTAGCTGTTTTGTTTTACCTTCGTCATGTGGCTTCGTGGCTTCGTGTAACAGTCCAATTCCACTGCTAGTAGATATTGTCCTCTTTGGGCTTTCCCTTTTGGGCTTTCGAGCTTTCCTCTCAAGGTTTTTAAAACGTGTCTGCTAGGAAAAGGTTTTCACACCCTTAATACTCCCCAACCGATGTGAGAACTCACAATCCACCTCCCTTCGGGGCCCAGCATCCTCGCTGGCACTCGTNCCCCCCCCCCCCCCTCAAGGCCCGGCGTCCTTGCTAGCACACCGCCTCGTGTCCCCCTTCAGGGCTCAACCTCCTCGCTGGCGCATATCCCGGTGCCTAGCTCTATTTCATTTGTAACAGCCAAAACCCATTGTTAGCAGATATTGTCTTGTTTGGGTTTTTCCTTTTGGGTTCCCTTCAAGGTTTTTAAAACGCGTCGGCTAGGGAGAAGTTTCCACACCCTTAATAAAGGATATTTCGTTTTTCTTCCCAACCTATGTGGGATCTCACACTTAGTTTTTAGTCTAAATTATTTAGGACCCATTTGATAATAGTTTCATATTTGTAGTTTTCGATTGTTTTGAAGTTCATGCTTGTTTTCTCGCACGATTTTTTACTATGGTTTCACGGTTTTTAAAGAATCACTTGAACAGTTAATCAAATTAAAGAAGAAAAACCAAAACTTGGCTTGGATTTTGAGAGAAACTCATACTTAAAAGTAGTGTTTATAAGCTTATCATGGATGAATATGATGAGAATGTTGTAATTGATGCTATGTTCTATCTGATATGGTGCAGTCATATGGGATAAAGGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGCAATATAGCTCAATCTGGGGGTTGTTGCAGTTAAACACATCTTGCTGCTCAATCTAGTACAAACTTTGACGATATCTTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAACCCATCACAAAAAGAACAAAACAGAAAAAAAAGAAACCCATAATAGGTTATCATCAGGTACTTGTATAATCATTTGATGTGTCATGTTTTTTCTTTTCTTCTTTTCAATAAGCTAATTATGTCTTCATCGTATTTGATTGTAAAGGTAAATTCATATTAATGCATGTTATTTGTGACAACTGCCTCCTACTTTGTTTTATTGGTTAGTATCTGATCTGTACTTGAGTTTATGAAGCATTT

mRNA sequence

TATGGTTCGAACCATAGATCAAGTGGTTCATAAAGTTTCTATATTTATAGGATTTGCCAGCTCGAAGTCAGACATCGTAATTCCATTCCAACACGCAGAGGCGTCCCTTTGCCTTGCCTCGCTTCGTTGGAGCTTCGCAATTGAAACTCCTCTACGGTTTCTCTCTACGTTTCCCCCTTTTTCTTCCGCCGATTCACCATTCCAGACCAATTCTCTTCTGTACACTCGATTCCTCTCGCGGCGGCTTGTGTTTTGCTCTTCGATTTCGACCGGAATGTCATACGCCTACCTTTTCAAGTACATCATTATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAATTTACCGATAAGCGATTCCAGCCTGTTCATGACTTGACTATTGGTGTCGAGTTTGGTGCTAGGATGATCACCATTGATAGCAAGCCAATCAAGTTGCAAATATGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACAAGGTCCTATTATAGAGGGGCTGCTGGAGCATTGCTTGTCTATGACATTACCAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGCAACAAGTGTGATCTTGCGCACAGAAGGGCTGTCAGCACCGAGGAAGGAGAGCAGTTTGCAAAGGAGCACGGTTTAATCTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATAAAAACTGCTGCGACCATTTATAAGAAGATCCAGGAGGGAGTATTTGATGTATCTAATGAGTCATATGGGATAAAGGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGCAATATAGCTCAATCTGGGGGTTGTTGCAGTTAAACACATCTTGCTGCTCAATCTAGTACAAACTTTGACGATATCTTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAACCCATCACAAAAAGAACAAAACAGAAAAAAAAGAAACCCATAATAGGTTATCATCAGGTACTTGTATAATCATTTGATGTGTCATGTTTTTTCTTTTCTTCTTTTCAATAAGCTAATTATGTCTTCATCGTATTTGATTGTAAAGGTAAATTCATATTAATGCATGTTATTTGTGACAACTGCCTCCTACTTTGTTTTATTGGTTAGTATCTGATCTGTACTTGAGTTTATGAAGCATTT

Coding sequence (CDS)

ATGGTTCGAACCATAGATCAAGTGGTTCATAAAGTTTCTATATTTATAGGATTTGCCAGCTCGAAGTCAGACATCGTAATTCCATTCCAACACGCAGAGGCGTCCCTTTGCCTTGCCTCGCTTCGTTGGAGCTTCGCAATTGAAACTCCTCTACGGTTTCTCTCTACGTTTCCCCCTTTTTCTTCCGCCGATTCACCATTCCAGACCAATTCTCTTCTGTACACTCGATTCCTCTCGCGGCGGCTTGTGTTTTGCTCTTCGATTTCGACCGGAATGTCATACGCCTACCTTTTCAAGTACATCATTATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAATTTACCGATAAGCGATTCCAGCCTGTTCATGACTTGACTATTGGTGTCGAGTTTGGTGCTAGGATGATCACCATTGATAGCAAGCCAATCAAGTTGCAAATATGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACAAGGTCCTATTATAGAGGGGCTGCTGGAGCATTGCTTGTCTATGACATTACCAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGCAACAAGTGTGATCTTGCGCACAGAAGGGCTGTCAGCACCGAGGAAGGAGAGCAGTTTGCAAAGGAGCACGGTTTAATCTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATAAAAACTGCTGCGACCATTTATAAGAAGATCCAGGAGGGAGTATTTGATGTATCTAATGAGTCATATGGGATAAAGGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGCAATATAGCTCAATCTGGGGGTTGTTGCAGTTAA

Protein sequence

MVRTIDQVVHKVSIFIGFASSKSDIVIPFQHAEASLCLASLRWSFAIETPLRFLSTFPPFSSADSPFQTNSLLYTRFLSRRLVFCSSISTGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS
Homology
[Close]
BLAST of Cp4.1LG10g12550 vs. Swiss-Prot
Match: RAB1C_ARATH (Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=1 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 7.8e-115
Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCC 302
           ESYGIKVGYGGIPGPSGGRDG+ +Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]
BLAST of Cp4.1LG10g12550 vs. Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 6.0e-107
Identity = 193/211 (91.47%), Postives = 200/211 (94.79%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQ+GVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGY  IPG SGG   + +Q GGCCS
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCCS 210

[Close]
BLAST of Cp4.1LG10g12550 vs. Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.5e-105
Identity = 192/211 (91.00%), Postives = 200/211 (94.79%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQ+GVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGY  +PG SGG  G+ +Q GGCCS
Sbjct: 181 ESYGIKVGY-VVPGQSGGA-GSSSQGGGCCS 209

[Close]
BLAST of Cp4.1LG10g12550 vs. Swiss-Prot
Match: RAB1B_ARATH (Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.5e-102
Identity = 181/210 (86.19%), Postives = 196/210 (93.33%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQ+GVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCC 302
           ES GIK+GYG   G +GGRDG I+Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]
BLAST of Cp4.1LG10g12550 vs. Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.7e-99
Identity = 183/213 (85.92%), Postives = 191/213 (89.67%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA  IYKKIQ+GVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYG-GIPGPSGGR--DGNIAQSGGCC 302
           ESYGIKVGYG G  GP   +  +G+  +S  CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

[Close]
BLAST of Cp4.1LG10g12550 vs. TrEMBL
Match: V4MRB1_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025789mg PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 6.0e-114
Identity = 233/304 (76.64%), Postives = 245/304 (80.59%), Query Frame = 1 

Query: 20  SSKSDIVIPFQHAEASLCL----ASLR----W----SFAIETPLRFLSTFPPFSSADSP- 79
           S  + I +PF H  AS CL    A LR    W    S    + L+ L +    S   S  
Sbjct: 7   SKVTGISVPFSHRGAS-CLSTSTAKLRHMSSWENSSSLISNSLLQLLFSVSSVSLTSSKQ 66

Query: 80  ------FQTNSLLYTRFLSR--RLVFCSSIS-TGMSYAYLFKYIIIGDTGVGKSCLLLQF 139
                 F  +SL   R L+   RL   SSIS T MSYAYLFKYIIIGDTGVGKSCLLLQF
Sbjct: 67  TEEKDSFHFSSLRLHRELANSIRLNLWSSISSTSMSYAYLFKYIIIGDTGVGKSCLLLQF 126

Query: 140 TDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 199
           TDKRFQPVHDLTIGVEFGARMITID+KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVY
Sbjct: 127 TDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 186

Query: 200 DITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFM 259
           DITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFA+EHGLIFM
Sbjct: 187 DITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAREHGLIFM 246

Query: 260 EASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGNIAQS 302
           EASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSNESYGIKVGYGGIPGPSGGRDG+ +Q 
Sbjct: 247 EASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSTSQG 306

[Close]
BLAST of Cp4.1LG10g12550 vs. TrEMBL
Match: A0A0A0LYF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G172570 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-113
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGYGGIPGPSGGRDG  AQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]
BLAST of Cp4.1LG10g12550 vs. TrEMBL
Match: A9PGF6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00360g PE=2 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.3e-113
Identity = 206/211 (97.63%), Postives = 209/211 (99.05%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGYGGIPGPSGGRDG  AQ+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGGSAQAGGCCS 211

[Close]
BLAST of Cp4.1LG10g12550 vs. TrEMBL
Match: M5WV77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011412mg PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.9e-113
Identity = 205/211 (97.16%), Postives = 210/211 (99.53%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGYGGIPGPSGGRDG+ +Q+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

[Close]
BLAST of Cp4.1LG10g12550 vs. TrEMBL
Match: A0A067GT96_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028237mg PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.9e-113
Identity = 205/211 (97.16%), Postives = 210/211 (99.53%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGYGGIPGPSGGRDG+ +Q+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

[Close]
BLAST of Cp4.1LG10g12550 vs. TAIR10
Match: AT4G17170.1 (AT4G17170.1 RAB GTPase homolog B1C)

HSP 1 Score: 414.8 bits (1065), Expect = 4.4e-116
Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCC 302
           ESYGIKVGYGGIPGPSGGRDG+ +Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]
BLAST of Cp4.1LG10g12550 vs. TAIR10
Match: AT4G35860.1 (AT4G35860.1 GTP-binding 2)

HSP 1 Score: 374.0 bits (959), Expect = 8.6e-104
Identity = 181/210 (86.19%), Postives = 196/210 (93.33%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQ+GVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCC 302
           ES GIK+GYG   G +GGRDG I+Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]
BLAST of Cp4.1LG10g12550 vs. TAIR10
Match: AT4G17160.1 (AT4G17160.1 RAB GTPase homolog B1A)

HSP 1 Score: 329.7 bits (844), Expect = 1.9e-90
Identity = 166/211 (78.67%), Postives = 182/211 (86.26%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITID+KPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDL  +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TAATIYK+IQ+GV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQS-GGCC 302
           E        G  PGP GG+D + +Q   GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204

[Close]
BLAST of Cp4.1LG10g12550 vs. TAIR10
Match: AT5G45750.1 (AT5G45750.1 RAB GTPase homolog A1C)

HSP 1 Score: 195.3 bits (495), Expect = 5.5e-50
Identity = 99/209 (47.37%), Postives = 133/209 (63.64%), Query Frame = 1 

Query: 94  YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDT 153
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D K IK QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69

Query: 154 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 213
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++ +WL++ R H + N+ +ML+GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129

Query: 214 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSNES 273
           L H  AV TE+ + FA++  L FME SA  A NVE AF +    I+  + +   + ++ES
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189

Query: 274 YGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
             +      I     G+D +  + GGCCS
Sbjct: 190 ANVPSKGDKI---DIGKDVSAVKKGGCCS 215

[Close]
BLAST of Cp4.1LG10g12550 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-49
Identity = 99/209 (47.37%), Postives = 130/209 (62.20%), Query Frame = 1 

Query: 94  YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDT 153
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D K +K QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69

Query: 154 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 213
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++  WL++ R H +AN+ IM +GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD 129

Query: 214 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSNES 273
           L H RAVSTE+ + FA+     FME SA  + NVE AF +  + IY+ +     D+ ++ 
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDP 189

Query: 274 YGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
             +  G     G     D +  +  GCCS
Sbjct: 190 AALPKGQTINVGSKD--DVSAVKKVGCCS 216

[Close]
BLAST of Cp4.1LG10g12550 vs. NCBI nr
Match: gi|567221272|ref|XP_006414265.1| (hypothetical protein EUTSA_v10025789mg [Eutrema salsugineum])

HSP 1 Score: 418.7 bits (1075), Expect = 8.7e-114
Identity = 233/304 (76.64%), Postives = 245/304 (80.59%), Query Frame = 1 

Query: 20  SSKSDIVIPFQHAEASLCL----ASLR----W----SFAIETPLRFLSTFPPFSSADSP- 79
           S  + I +PF H  AS CL    A LR    W    S    + L+ L +    S   S  
Sbjct: 7   SKVTGISVPFSHRGAS-CLSTSTAKLRHMSSWENSSSLISNSLLQLLFSVSSVSLTSSKQ 66

Query: 80  ------FQTNSLLYTRFLSR--RLVFCSSIS-TGMSYAYLFKYIIIGDTGVGKSCLLLQF 139
                 F  +SL   R L+   RL   SSIS T MSYAYLFKYIIIGDTGVGKSCLLLQF
Sbjct: 67  TEEKDSFHFSSLRLHRELANSIRLNLWSSISSTSMSYAYLFKYIIIGDTGVGKSCLLLQF 126

Query: 140 TDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 199
           TDKRFQPVHDLTIGVEFGARMITID+KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVY
Sbjct: 127 TDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 186

Query: 200 DITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFM 259
           DITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFA+EHGLIFM
Sbjct: 187 DITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAREHGLIFM 246

Query: 260 EASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGNIAQS 302
           EASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSNESYGIKVGYGGIPGPSGGRDG+ +Q 
Sbjct: 247 EASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSTSQG 306

[Close]
BLAST of Cp4.1LG10g12550 vs. NCBI nr
Match: gi|449443494|ref|XP_004139512.1| (PREDICTED: ras-related protein RABB1c [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 1.9e-113
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGYGGIPGPSGGRDG  AQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]
BLAST of Cp4.1LG10g12550 vs. NCBI nr
Match: gi|729426502|ref|XP_010518742.1| (PREDICTED: ras-related protein RABB1c [Tarenaya hassleriana])

HSP 1 Score: 416.8 bits (1070), Expect = 3.3e-113
Identity = 204/211 (96.68%), Postives = 210/211 (99.53%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKK+Q+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKVQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGYGGIPGPSGGRDG+++Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSLSQGGGCCS 211

[Close]
BLAST of Cp4.1LG10g12550 vs. NCBI nr
Match: gi|224089509|ref|XP_002308739.1| (hypothetical protein POPTR_0006s00360g [Populus trichocarpa])

HSP 1 Score: 416.8 bits (1070), Expect = 3.3e-113
Identity = 206/211 (97.63%), Postives = 209/211 (99.05%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGYGGIPGPSGGRDG  AQ+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGGSAQAGGCCS 211

[Close]
BLAST of Cp4.1LG10g12550 vs. NCBI nr
Match: gi|470114435|ref|XP_004293420.1| (PREDICTED: ras-related protein RABB1c [Fragaria vesca subsp. vesca])

HSP 1 Score: 416.0 bits (1068), Expect = 5.6e-113
Identity = 205/211 (97.16%), Postives = 210/211 (99.53%), Query Frame = 1 

Query: 92  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 151
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 152 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 211
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 212 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 271
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 272 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 303
           ESYGIKVGYGGIPGPSGGRDG+ +Q+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g12550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAB1C_ARATH7.8e-11597.14Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=1 SV=1[more]
RAB2B_MAIZE6.0e-10791.47Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1[more]
RAB2A_MAIZE2.5e-10591.00Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1[more]
RAB1B_ARATH1.5e-10286.19Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2 SV=1[more]
YPTV4_VOLCA2.7e-9985.92GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1[more]
BLAST of Cp4.1LG10g12550 vs. TrEMBL
Match NameE-valueIdentityDescription
V4MRB1_EUTSA6.0e-11476.64Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025789mg PE=4 SV=1[more]
A0A0A0LYF8_CUCSA1.3e-11398.10Uncharacterized protein OS=Cucumis sativus GN=Csa_1G172570 PE=4 SV=1[more]
A9PGF6_POPTR2.3e-11397.63Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00360g PE=2 SV=1[more]
M5WV77_PRUPE3.9e-11397.16Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011412mg PE=4 SV=1[more]
A0A067GT96_CITSI3.9e-11397.16Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028237mg PE=4 SV=1[more]
BLAST of Cp4.1LG10g12550 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17170.14.4e-11697.14 RAB GTPase homolog B1C[more]
AT4G35860.18.6e-10486.19 GTP-binding 2[more]
AT4G17160.11.9e-9078.67 RAB GTPase homolog B1A[more]
AT5G45750.15.5e-5047.37 RAB GTPase homolog A1C[more]
AT5G60860.11.6e-4947.37 RAB GTPase homolog A1F[more]
BLAST of Cp4.1LG10g12550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|567221272|ref|XP_006414265.1|8.7e-11476.64hypothetical protein EUTSA_v10025789mg [Eutrema salsugineum][more]
gi|449443494|ref|XP_004139512.1|1.9e-11398.10PREDICTED: ras-related protein RABB1c [Cucumis sativus][more]
gi|729426502|ref|XP_010518742.1|3.3e-11396.68PREDICTED: ras-related protein RABB1c [Tarenaya hassleriana][more]
gi|224089509|ref|XP_002308739.1|3.3e-11397.63hypothetical protein POPTR_0006s00360g [Populus trichocarpa][more]
gi|470114435|ref|XP_004293420.1|5.6e-11397.16PREDICTED: ras-related protein RABB1c [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0008152 metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g12550.1Cp4.1LG10g12550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 99..259
score: 2.3
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 98..251
score: 1.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 92..276
score: 6.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 93..271
score: 5.64
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 139..161
score: 1.1E-41coord: 236..258
score: 1.1E-41coord: 98..119
score: 1.1E-41coord: 121..137
score: 1.1E-41coord: 201..214
score: 1.1
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 90..302
score: 8.5E
NoneNo IPR availablePANTHERPTHR24073:SF545RAS-RELATED PROTEIN RABB1Ccoord: 90..302
score: 8.5E
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 95..261
score: 1.9
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 100..261
score: 7.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 98..261
score: 5.4E
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 103..302
score: 3.
NoneNo IPR availablePROFILEPS51419RABcoord: 93..301
score: 36

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g12550CmaCh18G006260Cucurbita maxima (Rimu)cmacpeB418
Cp4.1LG10g12550CmaCh13G003270Cucurbita maxima (Rimu)cmacpeB220
Cp4.1LG10g12550CmoCh13G003480Cucurbita moschata (Rifu)cmocpeB189
Cp4.1LG10g12550CmoCh18G006130Cucurbita moschata (Rifu)cmocpeB380
Cp4.1LG10g12550ClCG01G011390Watermelon (Charleston Gray)cpewcgB064
Cp4.1LG10g12550Lsi02G011760Bottle gourd (USVL1VR-Ls)cpelsiB059
Cp4.1LG10g12550Carg24380Silver-seed gourdcarcpeB0062
Cp4.1LG10g12550Carg27225Silver-seed gourdcarcpeB0700
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG10g12550Cp4.1LG20g06700Cucurbita pepo (Zucchini)cpecpeB087
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g12550Cucurbita pepo (Zucchini)cpecpeB082
Cp4.1LG10g12550Cucurbita maxima (Rimu)cmacpeB654
Cp4.1LG10g12550Cucurbita moschata (Rifu)cmocpeB604
Cp4.1LG10g12550Wild cucumber (PI 183967)cpecpiB067
Cp4.1LG10g12550Wild cucumber (PI 183967)cpecpiB075
Cp4.1LG10g12550Cucumber (Chinese Long) v2cpecuB073
Cp4.1LG10g12550Cucumber (Chinese Long) v2cpecuB082
Cp4.1LG10g12550Bottle gourd (USVL1VR-Ls)cpelsiB050
Cp4.1LG10g12550Watermelon (Charleston Gray)cpewcgB077
Cp4.1LG10g12550Watermelon (Charleston Gray)cpewcgB080
Cp4.1LG10g12550Watermelon (97103) v1cpewmB083
Cp4.1LG10g12550Watermelon (97103) v1cpewmB089
Cp4.1LG10g12550Melon (DHL92) v3.5.1cpemeB074
Cp4.1LG10g12550Cucumber (Gy14) v2cgybcpeB465
Cp4.1LG10g12550Melon (DHL92) v3.6.1cpemedB096
Cp4.1LG10g12550Silver-seed gourdcarcpeB0665
Cp4.1LG10g12550Silver-seed gourdcarcpeB0729
Cp4.1LG10g12550Cucumber (Chinese Long) v3cpecucB0077
Cp4.1LG10g12550Wax gourdcpewgoB0090