Cp4.1LG10g12390 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g12390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Mitochondrial transcription termination factor family protein
Location	Cp4.1LG10 : 9665611 .. 9666102 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTGGATAATTGGATCTTCCTCTGTTGCCTCGAACCCTAGATTTTATCGCACTAAAAAGCCTCCTCAAACAGGAGAATGTGGAAATTCCGGGGGAATTTCGACTAGGGATAGCAGGAATGGTAATCGGATTCCTCGGGCCACTAGAAAGGCGGCTCAGTTTATGGATGCTGAGAATATGAGTAGAAATTCACCGATCTTTCTTGAAAAACTTCTAGGAAGAGTTGAACATGAGAGCGATATTGGGCGATCGATTACTCGATTCTTGCGCTATCATCCGATTAATGAATTCGAGCCTTTCTTTGAGAGTGTAGGCCTGCAACCTGCAGAGTATAATGCGTTTCTTCCCCGTGATTTGATGTTCTTGAGTGATGATAGTTTATTGCTAGAGAACTATAATGTGTTGTGTAACTATGGAATTGAACGAAATAAGATAGGGAAGATCTACAAGGAGGCGACTCAGATCTTGGTCTCAGCCAAGCTAGTGTAG

mRNA sequence

ATGTATTGGATAATTGGATCTTCCTCTGTTGCCTCGAACCCTAGATTTTATCGCACTAAAAAGCCTCCTCAAACAGGAGAATGTGGAAATTCCGGGGGAATTTCGACTAGGGATAGCAGGAATGGTAATCGGATTCCTCGGGCCACTAGAAAGGCGGCTCAGTTTATGGATGCTGAGAATATGAGTAGAAATTCACCGATCTTTCTTGAAAAACTTCTAGGAAGAGTTGAACATGAGAGCGATATTGGGCGATCGATTACTCGATTCTTGCGCTATCATCCGATTAATGAATTCGAGCCTTTCTTTGAGAGTGTAGGCCTGCAACCTGCAGAGTATAATGCGTTTCTTCCCCGTGATTTGATGTTCTTGAGTGATGATAGTTTATTGCTAGAGAACTATAATGTGTTGTGTAACTATGGAATTGAACGAAATAAGATAGGGAAGATCTACAAGGAGGCGACTCAGATCTTGGTCTCAGCCAAGCTAGTGTAG

Coding sequence (CDS)

ATGTATTGGATAATTGGATCTTCCTCTGTTGCCTCGAACCCTAGATTTTATCGCACTAAAAAGCCTCCTCAAACAGGAGAATGTGGAAATTCCGGGGGAATTTCGACTAGGGATAGCAGGAATGGTAATCGGATTCCTCGGGCCACTAGAAAGGCGGCTCAGTTTATGGATGCTGAGAATATGAGTAGAAATTCACCGATCTTTCTTGAAAAACTTCTAGGAAGAGTTGAACATGAGAGCGATATTGGGCGATCGATTACTCGATTCTTGCGCTATCATCCGATTAATGAATTCGAGCCTTTCTTTGAGAGTGTAGGCCTGCAACCTGCAGAGTATAATGCGTTTCTTCCCCGTGATTTGATGTTCTTGAGTGATGATAGTTTATTGCTAGAGAACTATAATGTGTTGTGTAACTATGGAATTGAACGAAATAAGATAGGGAAGATCTACAAGGAGGCGACTCAGATCTTGGTCTCAGCCAAGCTAGTGTAG

Protein sequence

MYWIIGSSSVASNPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQFMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESVGLQPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQILVSAKLV

Homology

[Close]

BLAST of Cp4.1LG10g12390 vs. Swiss-Prot
Match: MTEFH_ARATH (Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana GN=MTERF18 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-14
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 1


Query: 49  TRKAAQFMDAENMSRNSPIFLEKLLGRVEHE-SDIGRSITRFLRYHPINEFEPFFESVGL 108
           T ++  +  AE ++ N+ + +  L+ +++       +S+ + L YHPINEFE FFES+G+
Sbjct: 47  TTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHPINEFEFFFESIGI 106

Query: 109 QPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQILV 159
             +E + FLP    F S+D  +L+    L  +G   NK+GK+YKE   + V
Sbjct: 107 DYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNKLGKLYKEERLVFV 157

[Close]

BLAST of Cp4.1LG10g12390 vs. TrEMBL
Match: A0A0A0L2G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507370 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.9e-58
Identity = 121/170 (71.18%), Postives = 130/170 (76.47%), Query Frame = 1


Query: 1   MYWIIGSSSVASNPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQ------ 60
           +YW  G  SVASNPRFY  KK PQT E  NSGG+    SRNG RI RAT K AQ      
Sbjct: 29  LYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGRRISRATIKEAQAAMLEY 88

Query: 61  --------FMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESVG 120
                   F DA+ MS+NSPIFL+KLLGRVEHE DIGRSI RFLRYHPINEFEPFFESVG
Sbjct: 89  LHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRFLRYHPINEFEPFFESVG 148

Query: 121 LQPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           LQPAEYNAFLPR+LMFLSDD LLLEN++VL NYG+ERNK GKIYKE TQI
Sbjct: 149 LQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKIYKEVTQI 198

[Close]

BLAST of Cp4.1LG10g12390 vs. TrEMBL
Match: A0A061F4J6_THECC (Mitochondrial transcription termination factor family protein, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_024876 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.5e-47
Identity = 106/171 (61.99%), Postives = 118/171 (69.01%), Query Frame = 1


Query: 2   YWIIGSSSVAS--NPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQ----- 61
           +W  GS  +A   NPR YRTK+   T    NS      D  N  RIPRAT K AQ     
Sbjct: 29  FWQTGSFHIAQRQNPRLYRTKRSVVTE---NSDKTMFSDGENVARIPRATLKEAQAALLE 88

Query: 62  ---------FMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESV 121
                    F DAENMS+NSP FL+KLL +VE E D+G S+TRFLRYHPINEFEPFFES+
Sbjct: 89  YLHSTRSIHFTDAENMSKNSPHFLQKLLKKVESEKDVGSSMTRFLRYHPINEFEPFFESL 148

Query: 122 GLQPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           GL+P EY+  LPRDLMFLSDD LLLENY VLCNYGIERNKIGKIYKEA Q+
Sbjct: 149 GLKPCEYSPLLPRDLMFLSDDCLLLENYRVLCNYGIERNKIGKIYKEAIQV 196

[Close]

BLAST of Cp4.1LG10g12390 vs. TrEMBL
Match: A0A061EXQ3_THECC (Mitochondrial transcription termination factor family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_024876 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.5e-47
Identity = 106/171 (61.99%), Postives = 118/171 (69.01%), Query Frame = 1


Query: 2   YWIIGSSSVAS--NPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQ----- 61
           +W  GS  +A   NPR YRTK+   T    NS      D  N  RIPRAT K AQ     
Sbjct: 29  FWQTGSFHIAQRQNPRLYRTKRSVVTE---NSDKTMFSDGENVARIPRATLKEAQAALLE 88

Query: 62  ---------FMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESV 121
                    F DAENMS+NSP FL+KLL +VE E D+G S+TRFLRYHPINEFEPFFES+
Sbjct: 89  YLHSTRSIHFTDAENMSKNSPHFLQKLLKKVESEKDVGSSMTRFLRYHPINEFEPFFESL 148

Query: 122 GLQPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           GL+P EY+  LPRDLMFLSDD LLLENY VLCNYGIERNKIGKIYKEA Q+
Sbjct: 149 GLKPCEYSPLLPRDLMFLSDDCLLLENYRVLCNYGIERNKIGKIYKEAIQV 196

[Close]

BLAST of Cp4.1LG10g12390 vs. TrEMBL
Match: A5BGN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06290 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 94/165 (56.97%), Postives = 114/165 (69.09%), Query Frame = 1


Query: 6   GSSSVASNPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQ----------- 65
           GS  +  NPRFY  K   ++    +    ST D  N   I R TR  AQ           
Sbjct: 36  GSFRIRQNPRFYGRKTSAESENFQSPVETSTVDFENVGHISRTTRAQAQAALLEYLHCTR 95

Query: 66  ---FMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESVGLQPAE 125
              FMDAENMS+NSP FLEK+LG+V++E++IG+SITRFLRYHPINEFEPFFES+GL P+E
Sbjct: 96  SLQFMDAENMSKNSPFFLEKILGKVKNEAEIGKSITRFLRYHPINEFEPFFESLGLTPSE 155

Query: 126 YNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           +   LPR+LMFL DD +LLENY +LCNYGI RNKIGKIYKEA ++
Sbjct: 156 FTNLLPRNLMFLCDDQVLLENYYILCNYGIARNKIGKIYKEAPEV 200

[Close]

BLAST of Cp4.1LG10g12390 vs. TrEMBL
Match: M5VSG6_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023810mg PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-42
Identity = 98/176 (55.68%), Postives = 116/176 (65.91%), Query Frame = 1


Query: 5   IGSSSVASNPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAA----------- 64
           IGS S A +PR YRTK+  +  +  N    ST D +N  RI  + +K A           
Sbjct: 30  IGSFSNAESPRLYRTKRASEDKDSENLDKSSTGDEKNAGRISSSIKKEAEAALLDYLHGT 89

Query: 65  ---QFMDAENMSRNSPIFLEKLLGRVEHESDI----------GRSITRFLRYHPINEFEP 124
              QFMDAENMS+NSP FL+KLL RV+ E DI          GR I+RFLRYHPINEFEP
Sbjct: 90  RGLQFMDAENMSKNSPHFLDKLLKRVDSEKDILMKKNNKKEIGREISRFLRYHPINEFEP 149

Query: 125 FFESVGLQPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           FFES+GL+P+EY   L R LMFLSDD LL+ NY VLC+YGI RNKIGKIYKEAT++
Sbjct: 150 FFESLGLKPSEYFPLLQRSLMFLSDDKLLVHNYTVLCHYGIARNKIGKIYKEATEV 205

[Close]

BLAST of Cp4.1LG10g12390 vs. TAIR10
Match: AT4G19650.1 (AT4G19650.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 131.7 bits (330), Expect = 4.0e-31
Identity = 57/99 (57.58%), Postives = 80/99 (80.81%), Query Frame = 1


Query: 59  ENMSRNSPIFLEKLLGRVE-HESDIGRSITRFLRYHPINEFEPFFESVGLQPAEYNAFLP 118
           E++S+NSP F+  LL +++ ++ D+ + +T+FLRY+PINEFEPFFES+GL P E+  FLP
Sbjct: 90  EHISKNSPCFMSTLLSKIDDNQKDVSKGLTKFLRYNPINEFEPFFESLGLCPYEFETFLP 149

Query: 119 RDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           R LMFLSDD ++ EN++ LCNYGI R KIG++YKEA +I
Sbjct: 150 RKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREI 188

[Close]

BLAST of Cp4.1LG10g12390 vs. TAIR10
Match: AT5G06810.1 (AT5G06810.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 129.0 bits (323), Expect = 2.6e-30
Identity = 70/165 (42.42%), Postives = 105/165 (63.64%), Query Frame = 1


Query: 10  VASNPRFYRTKKPPQTGEC-GNSGGISTRDSRNGNRIPRATRKAA----------QFMDA 69
           ++ NPRF+ T++     E  G   G+ TR     N I +  + A           QF+ A
Sbjct: 591 LSRNPRFFATQRALVDAEVSGEKWGLRTR-----NEIRKVAQVAMFDYFYQTRGLQFLVA 650

Query: 70  ENMSRNSPIFLEKLLGR-------VEHESDIGRSITRFLRYHPINEFEPFFESVGLQPAE 129
           E+MS+N+P+F + LL +       V+ + DI ++ITRFL +HP+NEFEPF ES+GL+P+E
Sbjct: 651 ESMSKNAPVFNDNLLKKLNGCDVDVDDDDDIVKAITRFLWFHPVNEFEPFLESLGLKPSE 710

Query: 130 YNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           ++  +P D MFL++D+ LLENY+V  NYGI R K+GKI+KEA ++
Sbjct: 711 FSHLIPCDKMFLNEDAFLLENYHVFWNYGIGREKMGKIFKEAREV 750

[Close]

BLAST of Cp4.1LG10g12390 vs. TAIR10
Match: AT3G60400.1 (AT3G60400.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 1


Query: 49  TRKAAQFMDAENMSRNSPIFLEKLLGRVEHE-SDIGRSITRFLRYHPINEFEPFFESVGL 108
           T ++  +  AE ++ N+ + +  L+ +++       +S+ + L YHPINEFE FFES+G+
Sbjct: 47  TTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHPINEFEFFFESIGI 106

Query: 109 QPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQILV 159
             +E + FLP    F S+D  +L+    L  +G   NK+GK+YKE   + V
Sbjct: 107 DYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNKLGKLYKEERLVFV 157

[Close]

BLAST of Cp4.1LG10g12390 vs. NCBI nr
Match: gi|659082933|ref|XP_008442104.1| (PREDICTED: uncharacterized protein LOC103486064 isoform X1 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 6.0e-61
Identity = 123/170 (72.35%), Postives = 136/170 (80.00%), Query Frame = 1


Query: 1   MYWIIGSSSVASNPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQ------ 60
           +YW IG  SVASNPRFY  KK PQT E  NSGG+    SRNG+R+ RAT K AQ      
Sbjct: 30  LYWGIGFPSVASNPRFYGNKKAPQTEEYENSGGMLNMGSRNGHRVSRATIKEAQAALFEY 89

Query: 61  --------FMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESVG 120
                   F+DAENMS+NSPIFL+KLLGRVEH+ DIGRS+ RFLRY+PINEFEPFFESVG
Sbjct: 90  LHSTRGIEFLDAENMSKNSPIFLKKLLGRVEHKGDIGRSVMRFLRYNPINEFEPFFESVG 149

Query: 121 LQPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           LQPAEYNAFLPR+LMFLSDD LLLEN++VLCNYGIERNK GKIYKEATQI
Sbjct: 150 LQPAEYNAFLPRNLMFLSDDDLLLENFHVLCNYGIERNKTGKIYKEATQI 199

[Close]

BLAST of Cp4.1LG10g12390 vs. NCBI nr
Match: gi|659082935|ref|XP_008442105.1| (PREDICTED: uncharacterized protein LOC103486064 isoform X2 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 6.0e-61
Identity = 123/170 (72.35%), Postives = 136/170 (80.00%), Query Frame = 1


Query: 1   MYWIIGSSSVASNPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQ------ 60
           +YW IG  SVASNPRFY  KK PQT E  NSGG+    SRNG+R+ RAT K AQ      
Sbjct: 30  LYWGIGFPSVASNPRFYGNKKAPQTEEYENSGGMLNMGSRNGHRVSRATIKEAQAALFEY 89

Query: 61  --------FMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESVG 120
                   F+DAENMS+NSPIFL+KLLGRVEH+ DIGRS+ RFLRY+PINEFEPFFESVG
Sbjct: 90  LHSTRGIEFLDAENMSKNSPIFLKKLLGRVEHKGDIGRSVMRFLRYNPINEFEPFFESVG 149

Query: 121 LQPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           LQPAEYNAFLPR+LMFLSDD LLLEN++VLCNYGIERNK GKIYKEATQI
Sbjct: 150 LQPAEYNAFLPRNLMFLSDDDLLLENFHVLCNYGIERNKTGKIYKEATQI 199

[Close]

BLAST of Cp4.1LG10g12390 vs. NCBI nr
Match: gi|449457339|ref|XP_004146406.1| (PREDICTED: uncharacterized protein LOC101221161 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 2.8e-58
Identity = 121/170 (71.18%), Postives = 130/170 (76.47%), Query Frame = 1


Query: 1   MYWIIGSSSVASNPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQ------ 60
           +YW  G  SVASNPRFY  KK PQT E  NSGG+    SRNG RI RAT K AQ      
Sbjct: 29  LYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGRRISRATIKEAQAAMLEY 88

Query: 61  --------FMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESVG 120
                   F DA+ MS+NSPIFL+KLLGRVEHE DIGRSI RFLRYHPINEFEPFFESVG
Sbjct: 89  LHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRFLRYHPINEFEPFFESVG 148

Query: 121 LQPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           LQPAEYNAFLPR+LMFLSDD LLLEN++VL NYG+ERNK GKIYKE TQI
Sbjct: 149 LQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKIYKEVTQI 198

[Close]

BLAST of Cp4.1LG10g12390 vs. NCBI nr
Match: gi|659093230|ref|XP_008447435.1| (PREDICTED: uncharacterized protein LOC103489881 isoform X2 [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 3.6e-58
Identity = 119/169 (70.41%), Postives = 134/169 (79.29%), Query Frame = 1


Query: 2   YWIIGSSSVASNPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQ------- 61
           Y  IG S VASNPRFYRTK+ P+T ECGNSGG+    SR G+ I RAT K AQ       
Sbjct: 30  YRRIGFSPVASNPRFYRTKETPKTEECGNSGGMLNMGSRKGHEITRATIKEAQATLLEYL 89

Query: 62  -------FMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESVGL 121
                  F+DAENMS+NSPIFLEKLLG+VEHE +IG SI +FLRYHPINEFEPFFESVGL
Sbjct: 90  HFTRGIQFLDAENMSKNSPIFLEKLLGKVEHEGNIGWSIMQFLRYHPINEFEPFFESVGL 149

Query: 122 QPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           QPAEYNAFLPR+LMFLSD  LLLEN++VLCNYGIERNK GKI++EAT+I
Sbjct: 150 QPAEYNAFLPRNLMFLSDADLLLENFHVLCNYGIERNKTGKIFREATEI 198

[Close]

BLAST of Cp4.1LG10g12390 vs. NCBI nr
Match: gi|659093228|ref|XP_008447433.1| (PREDICTED: uncharacterized protein LOC103489881 isoform X1 [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 3.6e-58
Identity = 119/169 (70.41%), Postives = 134/169 (79.29%), Query Frame = 1


Query: 2   YWIIGSSSVASNPRFYRTKKPPQTGECGNSGGISTRDSRNGNRIPRATRKAAQ------- 61
           Y  IG S VASNPRFYRTK+ P+T ECGNSGG+    SR G+ I RAT K AQ       
Sbjct: 30  YRRIGFSPVASNPRFYRTKETPKTEECGNSGGMLNMGSRKGHEITRATIKEAQATLLEYL 89

Query: 62  -------FMDAENMSRNSPIFLEKLLGRVEHESDIGRSITRFLRYHPINEFEPFFESVGL 121
                  F+DAENMS+NSPIFLEKLLG+VEHE +IG SI +FLRYHPINEFEPFFESVGL
Sbjct: 90  HFTRGIQFLDAENMSKNSPIFLEKLLGKVEHEGNIGWSIMQFLRYHPINEFEPFFESVGL 149

Query: 122 QPAEYNAFLPRDLMFLSDDSLLLENYNVLCNYGIERNKIGKIYKEATQI 157
           QPAEYNAFLPR+LMFLSD  LLLEN++VLCNYGIERNK GKI++EAT+I
Sbjct: 150 QPAEYNAFLPRNLMFLSDADLLLENFHVLCNYGIERNKTGKIFREATEI 198

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g12390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MTEFH_ARATH	3.2e-14	34.23	Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana G...	[more]

BLAST of Cp4.1LG10g12390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2G9_CUCSA	1.9e-58	71.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507370 PE=4 SV=1	[more]
A0A061F4J6_THECC	4.5e-47	61.99	Mitochondrial transcription termination factor family protein, putative isoform ...	[more]
A0A061EXQ3_THECC	4.5e-47	61.99	Mitochondrial transcription termination factor family protein, putative isoform ...	[more]
A5BGN8_VITVI	1.4e-43	56.97	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06290 PE=4 SV=...	[more]
M5VSG6_PRUPE	2.0e-42	55.68	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023810mg PE=4 S...	[more]

BLAST of Cp4.1LG10g12390 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19650.1	4.0e-31	57.58	Mitochondrial transcription termination factor family protein	[more]
AT5G06810.1	2.6e-30	42.42	Mitochondrial transcription termination factor family protein	[more]
AT3G60400.1	1.8e-15	34.23	Mitochondrial transcription termination factor family protein	[more]

BLAST of Cp4.1LG10g12390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082933\|ref\|XP_008442104.1\|	6.0e-61	72.35	PREDICTED: uncharacterized protein LOC103486064 isoform X1 [Cucumis melo]	[more]
gi\|659082935\|ref\|XP_008442105.1\|	6.0e-61	72.35	PREDICTED: uncharacterized protein LOC103486064 isoform X2 [Cucumis melo]	[more]
gi\|449457339\|ref\|XP_004146406.1\|	2.8e-58	71.18	PREDICTED: uncharacterized protein LOC101221161 [Cucumis sativus]	[more]
gi\|659093230\|ref\|XP_008447435.1\|	3.6e-58	70.41	PREDICTED: uncharacterized protein LOC103489881 isoform X2 [Cucumis melo]	[more]
gi\|659093228\|ref\|XP_008447433.1\|	3.6e-58	70.41	PREDICTED: uncharacterized protein LOC103489881 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009536	plastid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g12390.1	Cp4.1LG10g12390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 12..156 score: 1.1
None	No IPR available	PANTHER	PTHR13068:SF38	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 12..156 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g12390	Cucsa.263970	Cucumber (Gy14) v1	cgycpeB0697
Cp4.1LG10g12390	CmaCh03G000310	Cucurbita maxima (Rimu)	cmacpeB654
Cp4.1LG10g12390	CmoCh03G000300	Cucurbita moschata (Rifu)	cmocpeB604
Cp4.1LG10g12390	Csa4G507370	Cucumber (Chinese Long) v2	cpecuB082
Cp4.1LG10g12390	MELO3C008910	Melon (DHL92) v3.5.1	cpemeB074
Cp4.1LG10g12390	CSPI04G20290	Wild cucumber (PI 183967)	cpecpiB067
Cp4.1LG10g12390	MELO3C008910.2	Melon (DHL92) v3.6.1	cpemedB096
Cp4.1LG10g12390	CsaV3_4G030480	Cucumber (Chinese Long) v3	cpecucB0077
Cp4.1LG10g12390	Bhi03G002334	Wax gourd	cpewgoB0090
Cp4.1LG10g12390	CsGy4G018900	Cucumber (Gy14) v2	cgybcpeB465
Cp4.1LG10g12390	Carg25007	Silver-seed gourd	carcpeB0743

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g12390	Bottle gourd (USVL1VR-Ls)	cpelsiB050
Cp4.1LG10g12390	Watermelon (Charleston Gray)	cpewcgB077
Cp4.1LG10g12390	Watermelon (Charleston Gray)	cpewcgB080
Cp4.1LG10g12390	Watermelon (97103) v1	cpewmB083
Cp4.1LG10g12390	Watermelon (97103) v1	cpewmB089
Cp4.1LG10g12390	Silver-seed gourd	carcpeB0665
Cp4.1LG10g12390	Cucurbita pepo (Zucchini)	cpecpeB082
Cp4.1LG10g12390	Wild cucumber (PI 183967)	cpecpiB075
Cp4.1LG10g12390	Cucumber (Chinese Long) v2	cpecuB073