Cp4.1LG10g11750 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g11750
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING/U-box superfamily protein
LocationCp4.1LG10 : 8573238 .. 8573933 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTCGCTGCTTCTACGCCGATTCAGTATCGTCTTTACACCGCCGCCGCCCAATCCGAAACCCATACAGCTTTGGAAGTCCGAATGCGCTCTTTCAACCGTCTGATCTCTGCTTCTTCCTTCCCCGGAGTTCCGCCGCAAATTCTGTTTGAAACCAGACCCATTCCGGTGAACGATGCTCTGTTTCATCTCTCTCTGCGCCAACTCCATGATCCTCTGTTTCACATCCCCCGGTTACTCTCCACACTCGACATCCACGCCGCCGCCAGCGAAGTAATTGGCTGGAAAATCGCGTCTCAGATCGCCCAATTGTCCGGCGGAAACAGAGAGACGAGGTTCCACATCGTGGTGGAGGTGGATTTCATCCAAAACATCTGGATGGGTCAGGTGGCCGGAGTGTACCAGGGGCAGGGAAACGGCGGCGGACTGGTGGAGGAGACTGTTGTGGTGGATGAGTCGCCGGCGAGGAGGAGGCAGAGGAGAGGAGTGGTGGCGCGTGTTGAAGTGGAGGAAGAGAAGGAATTATTGGGAGATTGCTGTATCTGTTTGGATGAGATGAATAAGAAGAGGGAGGTGATAAGAACTCCGTGCGGGCATGTGTATCATGAATCATGCATCTTCCAGTGGCTCAACCTCCATAACTCTTGCCCTCTCTGTAAGAGGCCACTGCCATTGGAGGACAACTCAGCCTGA

mRNA sequence

ATGTCTTTCGCTGCTTCTACGCCGATTCAGTATCGTCTTTACACCGCCGCCGCCCAATCCGAAACCCATACAGCTTTGGAAGTCCGAATGCGCTCTTTCAACCGTCTGATCTCTGCTTCTTCCTTCCCCGGAGTTCCGCCGCAAATTCTGTTTGAAACCAGACCCATTCCGGTGAACGATGCTCTGTTTCATCTCTCTCTGCGCCAACTCCATGATCCTCTGTTTCACATCCCCCGGTTACTCTCCACACTCGACATCCACGCCGCCGCCAGCGAAGTAATTGGCTGGAAAATCGCGTCTCAGATCGCCCAATTGTCCGGCGGAAACAGAGAGACGAGGTTCCACATCGTGGTGGAGGTGGATTTCATCCAAAACATCTGGATGGGTCAGGTGGCCGGAGTGTACCAGGGGCAGGGAAACGGCGGCGGACTGGTGGAGGAGACTGTTGTGGTGGATGAGTCGCCGGCGAGGAGGAGGCAGAGGAGAGGAGTGGTGGCGCGTGTTGAAGTGGAGGAAGAGAAGGAATTATTGGGAGATTGCTGTATCTGTTTGGATGAGATGAATAAGAAGAGGGAGGTGATAAGAACTCCGTGCGGGCATGTGTATCATGAATCATGCATCTTCCAGTGGCTCAACCTCCATAACTCTTGCCCTCTCTGTAAGAGGCCACTGCCATTGGAGGACAACTCAGCCTGA

Coding sequence (CDS)

ATGTCTTTCGCTGCTTCTACGCCGATTCAGTATCGTCTTTACACCGCCGCCGCCCAATCCGAAACCCATACAGCTTTGGAAGTCCGAATGCGCTCTTTCAACCGTCTGATCTCTGCTTCTTCCTTCCCCGGAGTTCCGCCGCAAATTCTGTTTGAAACCAGACCCATTCCGGTGAACGATGCTCTGTTTCATCTCTCTCTGCGCCAACTCCATGATCCTCTGTTTCACATCCCCCGGTTACTCTCCACACTCGACATCCACGCCGCCGCCAGCGAAGTAATTGGCTGGAAAATCGCGTCTCAGATCGCCCAATTGTCCGGCGGAAACAGAGAGACGAGGTTCCACATCGTGGTGGAGGTGGATTTCATCCAAAACATCTGGATGGGTCAGGTGGCCGGAGTGTACCAGGGGCAGGGAAACGGCGGCGGACTGGTGGAGGAGACTGTTGTGGTGGATGAGTCGCCGGCGAGGAGGAGGCAGAGGAGAGGAGTGGTGGCGCGTGTTGAAGTGGAGGAAGAGAAGGAATTATTGGGAGATTGCTGTATCTGTTTGGATGAGATGAATAAGAAGAGGGAGGTGATAAGAACTCCGTGCGGGCATGTGTATCATGAATCATGCATCTTCCAGTGGCTCAACCTCCATAACTCTTGCCCTCTCTGTAAGAGGCCACTGCCATTGGAGGACAACTCAGCCTGA

Protein sequence

MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEVDFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVARVEVEEEKELLGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNSA
Homology
[Close]
BLAST of Cp4.1LG10g11750 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.6e-11
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 1 

Query: 174 KELLGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           K  +  C +C+DE     +V + PC HV+H+ C+  WL LHNSCP+C+  LP +D
Sbjct: 210 KSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]
BLAST of Cp4.1LG10g11750 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.1e-11
Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 1 

Query: 180 CCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           C +C+D+  +  E  + PC H+YH+ C+  WL LHNSCP+C+  LP +D
Sbjct: 224 CAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDD 272

[Close]
BLAST of Cp4.1LG10g11750 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.9e-10
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 1 

Query: 180 CCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNS 231
           C +CL E  ++  VI  PC H++H +CI  WL+  NSCPLC+  LP +D+S
Sbjct: 88  CPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDS 138

[Close]
BLAST of Cp4.1LG10g11750 vs. Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 1 

Query: 180 CCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNS 231
           C +CL E   +  VI  PC H++H +CI  WL+  NSCPLC+  LP +D+S
Sbjct: 88  CPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDS 138

[Close]
BLAST of Cp4.1LG10g11750 vs. Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-09
Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 1 

Query: 180 CCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNS 231
           C +CL E  ++   I  PC H++H SCI  WL+  NSCPLC+  LP +D++
Sbjct: 76  CPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPTDDDT 126

[Close]
BLAST of Cp4.1LG10g11750 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53
Identity = 117/232 (50.43%), Postives = 157/232 (67.67%), Query Frame = 1 

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFA S PIQYRLY  A+ +  +  L+V +    ++IS S   G P ++L +T  IP ++
Sbjct: 1   MSFAISNPIQYRLY--ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALF+LSLRQL  PLF+I ++LS+L+I  AAS+ +  +IAS I Q+   N ET FHI+ EV
Sbjct: 61  ALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVV--ARVEVEEEKELLG 180
           DFI+ IW+          G GG   EETVV+DE+P   ++  GV    R+  EE+ E LG
Sbjct: 121 DFIRLIWL-------PSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDN 230
           DC ICLDE++ +KREV+R PCGHVYHESCIF+WL  HNSCPLC++PL  +D+
Sbjct: 181 DCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDD 223

[Close]
BLAST of Cp4.1LG10g11750 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-53
Identity = 117/231 (50.65%), Postives = 156/231 (67.53%), Query Frame = 1 

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFA S PIQYRLY  A+ +  +  L+V +    ++IS S   G P ++L +T  IP ++
Sbjct: 1   MSFAISNPIQYRLY--ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALF+LSLRQL  PLF+I ++LS+L+I  AAS+ +  +IAS I Q+   N ET FHI+ EV
Sbjct: 61  ALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVV--ARVEVEEEKELLG 180
           DFI+ IW+          G GG   EETVV+DE+P   ++  GV    R+  EE+ E LG
Sbjct: 121 DFIRLIWL-------PSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           DC ICLDE++ +KREV+R PCGHVYHESCIF+WL  HNSCPLC++PL  +D
Sbjct: 181 DCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDD 222

[Close]
BLAST of Cp4.1LG10g11750 vs. TrEMBL
Match: A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34
Identity = 93/231 (40.26%), Postives = 128/231 (55.41%), Query Frame = 1 

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSF  S+PI Y L    A    +  LEV++    R IS SSF     +IL+ET+P P N+
Sbjct: 1   MSFEISSPIPYLLN---ANGFGNGVLEVQLSYLERAISVSSFS---QRILYETQPTPFNN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNR--ETRFHIVV 120
           ALF+LS+ QL  PLFHI + L +L+I     E I  +IAS +A +  GN    + F+++ 
Sbjct: 61  ALFYLSVHQLQHPLFHIRQFLYSLNIRR---ETIARQIASFVAHMCNGNTGWNSNFYVIA 120

Query: 121 EVDFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVARVEVEEEKELLG 180
            VD ++                        + ++E P     R   V R+   + +E  G
Sbjct: 121 RVDLVR-----------------------VIRIEEQPRAEGWRGVAVERLSKLKSEEEKG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           DC +CLDE++ +KREVIR PCGHVYHESCIF+WLN  NSCPLC+   PL +
Sbjct: 181 DCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

[Close]
BLAST of Cp4.1LG10g11750 vs. TrEMBL
Match: A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-22
Identity = 68/218 (31.19%), Postives = 112/218 (51.38%), Query Frame = 1 

Query: 15  TAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVNDALFHLSLRQLHDPL 74
           +AA   +    +E+R+  F++L+ + S      QIL +T PI ++D L    LR+L DP 
Sbjct: 20  SAATNGQPLQFVELRLGHFSQLVLSPSH-----QILQQTSPILISDTLIRFPLRELEDPP 79

Query: 75  F----HIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEVDFIQNIWMGQ 134
           F     + R LS+ +I  A  + I  KI+S   QL  GN  + FHI+  +DF+   W+  
Sbjct: 80  FISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHIIAALDFVYTHWVDL 139

Query: 135 VAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVARVEVEEEKELLGDCCICLDEMN-- 194
                          E+   V +   R    R +  + +    +E+  +C +C ++++  
Sbjct: 140 DPA------------EDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLHGK 199

Query: 195 --KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPL 225
             K++EV R PCGH++H+SCI +WL + NSCPLC+  L
Sbjct: 200 TEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGEL 220

[Close]
BLAST of Cp4.1LG10g11750 vs. TrEMBL
Match: A0A0A0L3Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G551140 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.1e-22
Identity = 73/221 (33.03%), Postives = 106/221 (47.96%), Query Frame = 1 

Query: 26  LEVRMRSFNRLISASSFPGVPPQILFETRPIPVNDALFHLSLRQLHDP----LFHIPRLL 85
           +++R+R F +L+   S      QIL +T P  ++D L   SL +L DP     F + R L
Sbjct: 31  VQLRLRHFGQLVHTPS-----QQILQQTSPTLISDTLIPFSLWELEDPPFISYFFLFRFL 90

Query: 86  STLDIHAAASEVIGWKIAS---QIAQLSGGNRETRFHIVVEVDFIQNIWMGQVAGVYQGQ 145
           S+ DI AA  + I + I+S   QI   +  N    FHI+ +VD +   W           
Sbjct: 91  SSYDISAAVCDAIFYNISSFAGQILLAADSNINVNFHIIADVDIVYTHW----------- 150

Query: 146 GNGGGLVEETVVVDESPARRRQRRGVVARVEVE-------EEKELLGDCCICLDEM---- 205
                 V+     D    R+     V+ RV  E       EEKE    C +C +++    
Sbjct: 151 ------VDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCSVCYEQLYGKR 210

Query: 206 ----NKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPL 225
                K++EV R PCGH+YH+SCI +WL + NSCPLC+R L
Sbjct: 211 ENENEKEKEVSRIPCGHMYHKSCILKWLKISNSCPLCRREL 229

[Close]
BLAST of Cp4.1LG10g11750 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-12
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 1 

Query: 174 KELLGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           K  +  C +C+DE     +V + PC HV+H+ C+  WL LHNSCP+C+  LP +D
Sbjct: 210 KSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]
BLAST of Cp4.1LG10g11750 vs. TAIR10
Match: AT5G15820.1 (AT5G15820.1 RING/U-box superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-11
Identity = 37/113 (32.74%), Postives = 53/113 (46.90%), Query Frame = 1 

Query: 120 VDFIQNIWMGQVAGVYQGQGN---GGGLVEETVVVDESPARRRQRRGVV-ARVEVEEEKE 179
           +D    +W+  V G      N   G     ET +    PA +    G+    + +EE   
Sbjct: 227 MDLDVEVWLDSVDGYAPMDYNAIIGQMFDNETGIKGTPPASKSVVDGLPDVELTIEELSS 286

Query: 180 LLGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           +   C IC DE+  K +V R PC H YH  CI  WL + N+CP+C+  LP +D
Sbjct: 287 VSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHELPTDD 339

[Close]
BLAST of Cp4.1LG10g11750 vs. TAIR10
Match: AT3G02340.1 (AT3G02340.1 RING/U-box superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-11
Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 1 

Query: 146 EETVVVDESPARRRQRRGV-VARVEVEEEKELLGDCCICLDEMNKKREVIRTPCGHVYHE 205
           +ET +    PA +   + + V  + VEE  +    C +C DEM  + +V R PC H YH 
Sbjct: 300 DETGIRGNPPAAKSVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHG 359

Query: 206 SCIFQWLNLHNSCPLCKRPLPLED 229
            CI  WL + N+CP+C+  LP +D
Sbjct: 360 ECIIPWLGIRNTCPVCRYELPTDD 383

[Close]
BLAST of Cp4.1LG10g11750 vs. TAIR10
Match: AT1G60360.1 (AT1G60360.1 RING/U-box superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-11
Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 1 

Query: 177 LGDCCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDNSA 232
           +  C +C++E     +    PC H+YH+ CI  WL L+NSCP+C+R LPL +  A
Sbjct: 221 MSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLPLVNTVA 275

[Close]
BLAST of Cp4.1LG10g11750 vs. TAIR10
Match: AT5G08139.1 (AT5G08139.1 RING/U-box superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-11
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 1 

Query: 180 CCICLDEMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           C +C DEMN   + ++ PC H YH  CI  WL + N+CP+C+  LP +D
Sbjct: 309 CAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDD 357

[Close]
BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: gi|778730084|ref|XP_011659694.1| (PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 2.2e-53
Identity = 117/232 (50.43%), Postives = 157/232 (67.67%), Query Frame = 1 

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFA S PIQYRLY  A+ +  +  L+V +    ++IS S   G P ++L +T  IP ++
Sbjct: 1   MSFAISNPIQYRLY--ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALF+LSLRQL  PLF+I ++LS+L+I  AAS+ +  +IAS I Q+   N ET FHI+ EV
Sbjct: 61  ALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVV--ARVEVEEEKELLG 180
           DFI+ IW+          G GG   EETVV+DE+P   ++  GV    R+  EE+ E LG
Sbjct: 121 DFIRLIWL-------PSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLEDN 230
           DC ICLDE++ +KREV+R PCGHVYHESCIF+WL  HNSCPLC++PL  +D+
Sbjct: 181 DCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDD 223

[Close]
BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: gi|449454422|ref|XP_004144954.1| (PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 2.9e-53
Identity = 117/231 (50.65%), Postives = 156/231 (67.53%), Query Frame = 1 

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSFA S PIQYRLY  A+ +  +  L+V +    ++IS S   G P ++L +T  IP ++
Sbjct: 1   MSFAISNPIQYRLY--ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEV 120
           ALF+LSLRQL  PLF+I ++LS+L+I  AAS+ +  +IAS I Q+   N ET FHI+ EV
Sbjct: 61  ALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEV 120

Query: 121 DFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVV--ARVEVEEEKELLG 180
           DFI+ IW+          G GG   EETVV+DE+P   ++  GV    R+  EE+ E LG
Sbjct: 121 DFIRLIWL-------PSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           DC ICLDE++ +KREV+R PCGHVYHESCIF+WL  HNSCPLC++PL  +D
Sbjct: 181 DCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDD 222

[Close]
BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: gi|778697402|ref|XP_011654314.1| (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 2.3e-34
Identity = 93/231 (40.26%), Postives = 128/231 (55.41%), Query Frame = 1 

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MSF  S+PI Y L    A    +  LEV++    R IS SSF     +IL+ET+P P N+
Sbjct: 1   MSFEISSPIPYLLN---ANGFGNGVLEVQLSYLERAISVSSFS---QRILYETQPTPFNN 60

Query: 61  ALFHLSLRQLHDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNR--ETRFHIVV 120
           ALF+LS+ QL  PLFHI + L +L+I     E I  +IAS +A +  GN    + F+++ 
Sbjct: 61  ALFYLSVHQLQHPLFHIRQFLYSLNIRR---ETIARQIASFVAHMCNGNTGWNSNFYVIA 120

Query: 121 EVDFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVARVEVEEEKELLG 180
            VD ++                        + ++E P     R   V R+   + +E  G
Sbjct: 121 RVDLVR-----------------------VIRIEEQPRAEGWRGVAVERLSKLKSEEEKG 180

Query: 181 DCCICLDEMN-KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLED 229
           DC +CLDE++ +KREVIR PCGHVYHESCIF+WLN  NSCPLC+   PL +
Sbjct: 181 DCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

[Close]
BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: gi|659132530|ref|XP_008466247.1| (PREDICTED: uncharacterized protein LOC103503717 [Cucumis melo])

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 76/232 (32.76%), Postives = 122/232 (52.59%), Query Frame = 1 

Query: 1   MSFAASTPIQYRLYTAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVND 60
           MS   +  ++  ++++ A +     +E+R+R +++L+S SS      QI+ +T P P++D
Sbjct: 1   MSSTTTLSLECCIHSSVATTADEQLVEIRLRRYSKLVSPSS-----NQIIQQTFPTPISD 60

Query: 61  ALFHLSLRQL---HDPLFHIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIV 120
           ALFH  L +L   + P F    LL  L    A S  I   I+S   QL+ GN    FH++
Sbjct: 61  ALFHFPLPELELENPPFFFHDLLLQFLS--PADSTAIFHNISSFALQLAAGNLNLNFHLI 120

Query: 121 VEVDFIQNIWMGQVAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVARVEVEEEKELL 180
             VD +  I +       Q            +V + +PA   +R  +  + +    +E +
Sbjct: 121 ATVDLLYTISVDLDLDPPQ---------YSPLVRNGAPASVIERL-MDEKYDDGNGREEM 180

Query: 181 GD-CCICLDEMN------KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKR 223
           GD CC+C +++N      K+ EV R PCGHVYH+ CI +WLN++NSCPLC+R
Sbjct: 181 GDQCCVCYEDLNCEREEEKEEEVTRIPCGHVYHKYCILKWLNINNSCPLCRR 215

[Close]
BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match: gi|778674460|ref|XP_011650219.1| (PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 2.0e-22
Identity = 68/218 (31.19%), Postives = 112/218 (51.38%), Query Frame = 1 

Query: 15  TAAAQSETHTALEVRMRSFNRLISASSFPGVPPQILFETRPIPVNDALFHLSLRQLHDPL 74
           +AA   +    +E+R+  F++L+ + S      QIL +T PI ++D L    LR+L DP 
Sbjct: 20  SAATNGQPLQFVELRLGHFSQLVLSPSH-----QILQQTSPILISDTLIRFPLRELEDPP 79

Query: 75  F----HIPRLLSTLDIHAAASEVIGWKIASQIAQLSGGNRETRFHIVVEVDFIQNIWMGQ 134
           F     + R LS+ +I  A  + I  KI+S   QL  GN  + FHI+  +DF+   W+  
Sbjct: 80  FISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHIIAALDFVYTHWVDL 139

Query: 135 VAGVYQGQGNGGGLVEETVVVDESPARRRQRRGVVARVEVEEEKELLGDCCICLDEMN-- 194
                          E+   V +   R    R +  + +    +E+  +C +C ++++  
Sbjct: 140 DPA------------EDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYEDLHGK 199

Query: 195 --KKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPL 225
             K++EV R PCGH++H+SCI +WL + NSCPLC+  L
Sbjct: 200 TEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGEL 220

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g11750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNG1L_ARATH3.6e-1143.64E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RING1_GOSHI8.1e-1144.90E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RN181_RAT8.9e-1047.06E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
RN181_MOUSE1.5e-0947.06E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1[more]
RN181_HUMAN4.4e-0945.10E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1[more]
BLAST of Cp4.1LG10g11750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K696_CUCSA1.6e-5350.43Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1[more]
A0A0A0K2W2_CUCSA2.0e-5350.65Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1[more]
A0A0A0KYC0_CUCSA1.6e-3440.26Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1[more]
A0A0A0LRB0_CUCSA1.4e-2231.19Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1[more]
A0A0A0L3Z2_CUCSA7.1e-2233.03Uncharacterized protein OS=Cucumis sativus GN=Csa_4G551140 PE=4 SV=1[more]
BLAST of Cp4.1LG10g11750 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.12.0e-1243.64 RING/U-box superfamily protein[more]
AT5G15820.12.3e-1132.74 RING/U-box superfamily protein[more]
AT3G02340.12.9e-1136.90 RING/U-box superfamily protein[more]
AT1G60360.12.9e-1141.82 RING/U-box superfamily protein[more]
AT5G08139.13.8e-1144.90 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG10g11750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730084|ref|XP_011659694.1|2.2e-5350.43PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus][more]
gi|449454422|ref|XP_004144954.1|2.9e-5350.65PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus][more]
gi|778697402|ref|XP_011654314.1|2.3e-3440.26PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus][more]
gi|659132530|ref|XP_008466247.1|1.6e-2232.76PREDICTED: uncharacterized protein LOC103503717 [Cucumis melo][more]
gi|778674460|ref|XP_011650219.1|2.0e-2231.19PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g11750.1Cp4.1LG10g11750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 179..221
score: 4.2
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 180..220
score: 3.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 180..221
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 179..224
score: 1.1
NoneNo IPR availableunknownCoilCoilcoord: 230..231
scor
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 106..228
score: 3.3E-21coord: 1..54
score: 3.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 168..226
score: 1.06

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g11750CmaCh07G013020Cucurbita maxima (Rimu)cmacpeB863
Cp4.1LG10g11750CmoCh07G013470Cucurbita moschata (Rifu)cmocpeB803
Cp4.1LG10g11750MELO3C009075Melon (DHL92) v3.5.1cpemeB072
Cp4.1LG10g11750Lsi01G019150Bottle gourd (USVL1VR-Ls)cpelsiB055
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g11750Cucurbita pepo (Zucchini)cpecpeB079
Cp4.1LG10g11750Cucurbita pepo (Zucchini)cpecpeB085
Cp4.1LG10g11750Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g11750Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g11750Wild cucumber (PI 183967)cpecpiB066
Cp4.1LG10g11750Cucumber (Chinese Long) v2cpecuB071
Cp4.1LG10g11750Watermelon (Charleston Gray)cpewcgB079
Cp4.1LG10g11750Watermelon (97103) v1cpewmB080
Cp4.1LG10g11750Cucumber (Gy14) v2cgybcpeB464
Cp4.1LG10g11750Melon (DHL92) v3.6.1cpemedB094
Cp4.1LG10g11750Silver-seed gourdcarcpeB0276
Cp4.1LG10g11750Silver-seed gourdcarcpeB0398
Cp4.1LG10g11750Cucumber (Chinese Long) v3cpecucB0076
Cp4.1LG10g11750Wax gourdcpewgoB0104