Cp4.1LG10g09820 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g09820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPectate lyase
LocationCp4.1LG10 : 4407397 .. 4408883 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCCATTGTTATCCCTCTTCTTCCTCGCCACAATTATCCGCCTCCCTTCACCGTCCACGGCCTACTCCAACAGCTACACCAAACTAGCCCTCAATCCCATTGACGCATGCTGGAGGACCAACCCCAACTGGGCGGCCAACCGCCGCGCCCTGGCAGACTGCGCCGTCGGGTTTGGCAGTGACGCATTGGGAGGCAAATTCGGGTCAATCTACGTGGTCATAGACCCGTCGGACGACCCGGAATACCCGAAGCCCGGAACGCTGCGTTTTGGGGTGATCCAAGAGGAGCCATTATGGATTGTATTCGCAAGAGATATGGTGATTACTCTGGAAAGAGAGCTGATGGTGAACAGCTTCAAGACCATTGACGGGCGAGGGGCTAAAGTGGAAATTGGCAATGGGCCATGCATTACCATCCAAAACGTGAGCCATGTCATAATCCACGGCATCACCATCCGTGACTGTAAGCCGGCCAAGCCTGGGCGCGTGAGAAGCTCACTCACCCATTGTGGAGACCGCCAACAGTCCGATGGTGACGCCATTTCTGTATTCAGTTCTTCCCATATTTGGATCGACCATTGCTCCTTGGCTAGCTGCACTGACGGCCTCATTGACGTCATCCACGCTTCCACTGCCGTCACCATCTCTAATAATTACTTCTCTCAACATGATAAAGTAGGCTCCTCAAATTAATTATTTTAATTATACCCTAATTTTTTTTTTCTTGATTTAGAACTAAATAATTAATTAATGTTGTGGTTAGGTGATCCTTCTCGGACACAACGATGAATTTACCGCTGATCGAATTATGAGAGTGACCGTAGCCTTCAATCGTTTCGGCGATGGGCTTGTTCAAAGAATGCCAAGGTAATTAAATCAAGCTCTCCATAATAGTATGATATTGTCCCATTTGAACATAAGCTCCTGGACTTTCCTAAAATGTATTACTTATAAATACACGATCATTCTCTAAATTAGTCAACGTGGGACTCGCCGCCTCCGATAAATTTGCAGGGTGAGATTTGGGTATGCCCATGTTGCCAATAATTGGTACCATAAGTGGGAAATGTACGCTGTGGGTGGCAGTGCAGATCCAAAAATCTTCAGCCAAGGAAACTACTTTGATGCTCCTGATGATTCATCCTCAAAGCAGGTAAATTGATTAGTATGATTGAATACAGTTTTGATCTCTCGACGACGATTACGATTACGATTATGATAACGAGATCGGATTTGTGGGGGTTAAATGTATGTTGTAGGTTACAAAGAGAGAGGTTTATGTGAATGGATGGAAGAAGTGGAAATGGAGGTCTTCAAATGATGTGTTTGTGAATGGGGCTTATTTCATCCCATCTGGGTGGGGGTCTTGTACGCCTATCTACACTCGAGATCAAGCTTTTCCTGTGGCTCATGGCTCTTTGGCTCCTCTTTTGACTGATACCGCTGGCGCTTTGTGTTGTGTTGTTGGTAAAGCTTGTTGA

mRNA sequence

ATGGCTTCCCCATTGTTATCCCTCTTCTTCCTCGCCACAATTATCCGCCTCCCTTCACCGTCCACGGCCTACTCCAACAGCTACACCAAACTAGCCCTCAATCCCATTGACGCATGCTGGAGGACCAACCCCAACTGGGCGGCCAACCGCCGCGCCCTGGCAGACTGCGCCGTCGGGTTTGGCAGTGACGCATTGGGAGGCAAATTCGGGTCAATCTACGTGGTCATAGACCCGTCGGACGACCCGGAATACCCGAAGCCCGGAACGCTGCGTTTTGGGGTGATCCAAGAGGAGCCATTATGGATTGTATTCGCAAGAGATATGGTGATTACTCTGGAAAGAGAGCTGATGGTGAACAGCTTCAAGACCATTGACGGGCGAGGGGCTAAAGTGGAAATTGGCAATGGGCCATGCATTACCATCCAAAACGTGAGCCATGTCATAATCCACGGCATCACCATCCGTGACTGTAAGCCGGCCAAGCCTGGGCGCGTGAGAAGCTCACTCACCCATTGTGGAGACCGCCAACAGTCCGATGGTGACGCCATTTCTGTATTCAGTTCTTCCCATATTTGGATCGACCATTGCTCCTTGGCTAGCTGCACTGACGGCCTCATTGACGTCATCCACGCTTCCACTGCCGTCACCATCTCTAATAATTACTTCTCTCAACATGATAAATGGGAAATGTACGCTGTGGGTGGCAGTGCAGATCCAAAAATCTTCAGCCAAGGAAACTACTTTGATGCTCCTGATGATTCATCCTCAAAGCAGGTTACAAAGAGAGAGGTTTATGTGAATGGATGGAAGAAGTGGAAATGGAGGTCTTCAAATGATGTGTTTGTGAATGGGGCTTATTTCATCCCATCTGGGTGGGGGTCTTGTACGCCTATCTACACTCGAGATCAAGCTTTTCCTGTGGCTCATGGCTCTTTGGCTCCTCTTTTGACTGATACCGCTGGCGCTTTGTGTTGTGTTGTTGGTAAAGCTTGTTGA

Coding sequence (CDS)

ATGGCTTCCCCATTGTTATCCCTCTTCTTCCTCGCCACAATTATCCGCCTCCCTTCACCGTCCACGGCCTACTCCAACAGCTACACCAAACTAGCCCTCAATCCCATTGACGCATGCTGGAGGACCAACCCCAACTGGGCGGCCAACCGCCGCGCCCTGGCAGACTGCGCCGTCGGGTTTGGCAGTGACGCATTGGGAGGCAAATTCGGGTCAATCTACGTGGTCATAGACCCGTCGGACGACCCGGAATACCCGAAGCCCGGAACGCTGCGTTTTGGGGTGATCCAAGAGGAGCCATTATGGATTGTATTCGCAAGAGATATGGTGATTACTCTGGAAAGAGAGCTGATGGTGAACAGCTTCAAGACCATTGACGGGCGAGGGGCTAAAGTGGAAATTGGCAATGGGCCATGCATTACCATCCAAAACGTGAGCCATGTCATAATCCACGGCATCACCATCCGTGACTGTAAGCCGGCCAAGCCTGGGCGCGTGAGAAGCTCACTCACCCATTGTGGAGACCGCCAACAGTCCGATGGTGACGCCATTTCTGTATTCAGTTCTTCCCATATTTGGATCGACCATTGCTCCTTGGCTAGCTGCACTGACGGCCTCATTGACGTCATCCACGCTTCCACTGCCGTCACCATCTCTAATAATTACTTCTCTCAACATGATAAATGGGAAATGTACGCTGTGGGTGGCAGTGCAGATCCAAAAATCTTCAGCCAAGGAAACTACTTTGATGCTCCTGATGATTCATCCTCAAAGCAGGTTACAAAGAGAGAGGTTTATGTGAATGGATGGAAGAAGTGGAAATGGAGGTCTTCAAATGATGTGTTTGTGAATGGGGCTTATTTCATCCCATCTGGGTGGGGGTCTTGTACGCCTATCTACACTCGAGATCAAGCTTTTCCTGTGGCTCATGGCTCTTTGGCTCCTCTTTTGACTGATACCGCTGGCGCTTTGTGTTGTGTTGTTGGTAAAGCTTGTTGA

Protein sequence

MASPLLSLFFLATIIRLPSPSTAYSNSYTKLALNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHASTAVTISNNYFSQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPLLTDTAGALCCVVGKAC
Homology
[Close]
BLAST of Cp4.1LG10g09820 vs. Swiss-Prot
Match: PLY2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 438.3 bits (1126), Expect = 7.2e-122
Identity = 218/361 (60.39%), Postives = 255/361 (70.64%), Query Frame = 1 

Query: 23  AYSNSYT--KLALNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSD 82
           AYSN YT  KL  NPID+CWR NP WA+NRRALADCAVGFG  A+GGK+GSIYVV +PSD
Sbjct: 24  AYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGKSAVGGKYGSIYVVTNPSD 83

Query: 83  DPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCIT 142
           DPE P+PGTLR+ VIQ +PLWI FARDMVI L  EL++NS+KTIDGRGAKVEI  GPCIT
Sbjct: 84  DPENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTIDGRGAKVEIAYGPCIT 143

Query: 143 IQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDHCSLAS 202
           IQ+VSHVIIHGI+I DCKP K GRVRSS TH G R+ SDGDAI++F SSHIWIDHC  + 
Sbjct: 144 IQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSDGDAIAIFDSSHIWIDHCFFSR 203

Query: 203 CTDGLIDVIHASTAVT------------------------------ISNNYF-------- 262
           C DGLIDV+HASTAVT                              I+ N+F        
Sbjct: 204 CQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERM 263

Query: 263 ------------SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVYVNGWK 322
                       ++++KW+MYA+GGSADP IFS+GNYF A DD S KQVTKR      WK
Sbjct: 264 PRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPSKKQVTKRIDSGYDWK 323

Query: 323 KWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPLLTDTAGALCCVVGKA 332
           +WKWR+S DVF NGAYF+PSG+G+ TP+Y R + FPV+HGSL PLLT +AG L C  G+ 
Sbjct: 324 RWKWRTSKDVFKNGAYFVPSGYGTVTPLYGRAERFPVSHGSLVPLLTSSAGPLHCYSGRI 383

[Close]
BLAST of Cp4.1LG10g09820 vs. Swiss-Prot
Match: PLY16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 6.6e-107
Identity = 196/343 (57.14%), Postives = 238/343 (69.39%), Query Frame = 1 

Query: 33  LNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRF 92
           +NP+D+CWR   +WAANR+ LADC VGFGS  LGGK G++YVV +P D+ + P+PG+LR+
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNLYVVTNPYDNAQNPQPGSLRY 105

Query: 93  GVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGI 152
           GVIQ +PLWI FA+DMVITLE ELMVNS+KTIDGRGAKVEI  GPCITIQ+V++VI+HGI
Sbjct: 106 GVIQAKPLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGI 165

Query: 153 TIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHAS 212
           +I DCKP K G VRSS TH G R+ SDGDAI++F SS+IWIDHC LASCTDGLIDVIHAS
Sbjct: 166 SIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHAS 225

Query: 213 TA------------------------------VTISNNYF-------------------- 272
           T                               VT++ N+F                    
Sbjct: 226 TGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVAN 285

Query: 273 SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFV 326
           +++DKW MYA+GGSADP IFS+GNYF A D S+SK+VTKREV   GW  W+WR+S DVF 
Sbjct: 286 NRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVK-GGWNNWRWRTSKDVFK 345

[Close]
BLAST of Cp4.1LG10g09820 vs. Swiss-Prot
Match: PLY17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 4.3e-106
Identity = 199/358 (55.59%), Postives = 241/358 (67.32%), Query Frame = 1 

Query: 19  SPSTA-YSNSYTKLALNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVID 78
           SP+ A Y     +  +NP+D+CWR   +W  NR  LADCAVGFGS  LGGK G+IYVV +
Sbjct: 31  SPAAAPYPAEEPQNIMNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNIYVVTN 90

Query: 79  PSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGP 138
           P D+ + P PG+LR+GVIQ +PLWI FA+DMVITL  ELMVNS+KTIDGRGAKVEI  GP
Sbjct: 91  PYDNAQNPHPGSLRYGVIQAKPLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGP 150

Query: 139 CITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDHCS 198
           CITIQ+V++VI+HGI+I DCKP K G+VRSS TH G R+ SDGDAI++F SS++WIDHC 
Sbjct: 151 CITIQDVTNVIVHGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCY 210

Query: 199 LASCTDGLIDVIHASTA------------------------------VTISNNYF----- 258
           LASCTDGLIDVIHASTA                              VT++ N+F     
Sbjct: 211 LASCTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLV 270

Query: 259 ---------------SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVYVN 318
                          +++DKW MYA+GGSADP IFS+GNYF A D S SK+VTKREV   
Sbjct: 271 ERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVK-G 330

Query: 319 GWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPLLTDTAGALCC 326
           GW  W+WR+SNDVF NGA+F+PSG+GS    Y+  Q F VA G+L P LT  AG L C
Sbjct: 331 GWNNWRWRTSNDVFKNGAFFVPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNC 387

[Close]
BLAST of Cp4.1LG10g09820 vs. Swiss-Prot
Match: PLY15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.9e-78
Identity = 162/350 (46.29%), Postives = 210/350 (60.00%), Query Frame = 1 

Query: 34  NPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSD-DPEYPKPGTLRF 93
           NPID CWR + NW  NR+ LADC +GFG +A+GG+ G  Y+V DP+D D   PKPGTLR 
Sbjct: 122 NPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRH 181

Query: 94  GVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGI 153
            VIQEEPLWIVF RDMVI L++EL++NSFKTID RG+ V I NG CITIQ +++VIIHG+
Sbjct: 182 AVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGL 241

Query: 154 TIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDH-----C----------- 213
            I DCKP     VRSS +H G R  +DGDA+S+F SSHIWIDH     C           
Sbjct: 242 HIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGS 301

Query: 214 -------SLASCTDGLIDVIHAST-------AVTISNNYFSQ------------------ 273
                  +  +  + ++ + H+ +        VTI+ N+F +                  
Sbjct: 302 TAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVN 361

Query: 274 --HDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKR-EVYVNGWKKWKWRSSNDVF 332
             +  WEMYA+GGSA+P I SQGN + AP D  +K+VTKR E   + WKKW WRS  D+ 
Sbjct: 362 NDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLL 421

[Close]
BLAST of Cp4.1LG10g09820 vs. Swiss-Prot
Match: PLY1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2)

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-77
Identity = 162/352 (46.02%), Postives = 201/352 (57.10%), Query Frame = 1 

Query: 34  NPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSDD-PEYPKPGTLRF 93
           NPID CWR +PNW  NR+ LADC +GFG +A+GG+ G  YVV DP DD P  P+PGTLR 
Sbjct: 81  NPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRH 140

Query: 94  GVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGI 153
            VIQ+ PLWIVF RDMVI L++EL+VNSFKTIDGRGA V I NG CITIQ V++VI+HG+
Sbjct: 141 AVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGL 200

Query: 154 TIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDH----------------- 213
            I DCKP     VRSS TH G R  +DGDAIS+F SSH+WIDH                 
Sbjct: 201 HIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGS 260

Query: 214 ---------------CSLASCTDGLIDVIHASTAVTISNNYF------------------ 273
                            L   +D  +     +  VTI+ N+F                  
Sbjct: 261 TAITISNNHLTHHNEVMLLGHSDSYMR--DKAMQVTIAYNHFGVGLIQRMPRCRHGYFHV 320

Query: 274 --SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKR-EVYVNGWKKWKWRSSND 332
             + +  WEMYA+GGSA+P I SQGN + AP +  +K+VTKR +   + WK W WRS  D
Sbjct: 321 VNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGD 380

[Close]
BLAST of Cp4.1LG10g09820 vs. TrEMBL
Match: R0IE75_9BRAS (Pectate lyase OS=Capsella rubella GN=CARUB_v10011187mg PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.8e-120
Identity = 222/385 (57.66%), Postives = 265/385 (68.83%), Query Frame = 1 

Query: 1   MASPLLSLFFLATIIRLPSPSTAYSNSYT----KLALNPIDACWRTNPNWAANRRALADC 60
           MAS  L++  L           AYSN YT    KL+LNPID+CWR NP WA NRRALADC
Sbjct: 1   MASLFLTVSLLLAAFSSSLVEAAYSNGYTYTIPKLSLNPIDSCWRRNPGWAYNRRALADC 60

Query: 61  AVGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLEREL 120
           AVGFG  A+GGK+GS+YVV +P+DDPE P+PGTLR  VIQ +PLWI FARDMVI L+ EL
Sbjct: 61  AVGFGKAAVGGKYGSVYVVTNPTDDPENPRPGTLRHAVIQAKPLWITFARDMVIVLQNEL 120

Query: 121 MVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQ 180
           ++NS+KTIDGRGAKVEI  GPCITIQ+VSHVIIHGI+I DCKP K GRVRSS TH G+R+
Sbjct: 121 IMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHIGNRK 180

Query: 181 QSDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHASTAVT-------------------- 240
            SDGDAI++F SSHIWIDHC  + C DGLIDV+HASTAVT                    
Sbjct: 181 GSDGDAIAIFDSSHIWIDHCHFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDN 240

Query: 241 ----------ISNNYF--------------------SQHDKWEMYAVGGSADPKIFSQGN 300
                     I+ N+F                    ++++KW+MYA+GGSADP IFS+GN
Sbjct: 241 NVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGN 300

Query: 301 YFDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFP 332
           YF APDDSS KQVTKR      W++WKWR+S DVF NGAYF+PSG+G+ TP+Y R + FP
Sbjct: 301 YFVAPDDSSKKQVTKRIDSGYDWRRWKWRTSKDVFKNGAYFVPSGYGTVTPLYKRAEWFP 360

[Close]
BLAST of Cp4.1LG10g09820 vs. TrEMBL
Match: A0A0A0LU35_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_1G059200 PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.6e-118
Identity = 218/374 (58.29%), Postives = 259/374 (69.25%), Query Frame = 1 

Query: 8   LFFLATIIRLPSPSTAYSNSYTKLALNPIDACWRTNPNWAANRRALADCAVGFGSDALGG 67
           L  L  I+ L +PS     +  K  +N ID+CWR   NWA NR+ALADCAVG+G DA+GG
Sbjct: 9   LLILLFILSLINPSLQDYYTPQKKNMNVIDSCWRQTSNWAKNRKALADCAVGYGKDAIGG 68

Query: 68  KFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNSFKTIDGR 127
           KFG+IY V DPSD+P  PK GTLR+GVIQ++PLWIVF +DMVI L+ ELMVNSFKTIDGR
Sbjct: 69  KFGTIYTVTDPSDNPSNPKYGTLRYGVIQDKPLWIVFGKDMVIVLKNELMVNSFKTIDGR 128

Query: 128 GAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFS 187
           GAKVEI  GPCIT+Q VSHVIIHGI+I DCKP K G VR +++H G R+ SDGDAI+VF 
Sbjct: 129 GAKVEIAYGPCITVQGVSHVIIHGISIHDCKPGKAGLVRDTVSHIGKRKGSDGDAIAVFG 188

Query: 188 SSHIWIDHCSLASCTDGLIDVIHAS------------------------------TAVTI 247
           SSH+WIDHC LA CTDGLIDVIHAS                                VTI
Sbjct: 189 SSHVWIDHCYLARCTDGLIDVIHASTSVTISNNYFSQHDKVMLLGHNDGFTDDKIMRVTI 248

Query: 248 SNNYF--------------------SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSK 307
             N F                    +++D+W+MYA+GGSA+P IFS+GNYF AP +S +K
Sbjct: 249 VFNRFGAGLIERMPRVRFGYAHVANNRYDEWKMYAIGGSANPTIFSEGNYFVAPQNSYAK 308

Query: 308 QVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPLLT 332
           QVTKREV  NGWK WKWRSS DVF+NGAYF+PSGWGSC+PIYT+ Q+FPVA GS+ P LT
Sbjct: 309 QVTKREVN-NGWKNWKWRSSRDVFLNGAYFVPSGWGSCSPIYTKAQSFPVAPGSMVPALT 368

[Close]
BLAST of Cp4.1LG10g09820 vs. TrEMBL
Match: D7KN70_ARALL (Pectate lyase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_312221 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.4e-118
Identity = 221/383 (57.70%), Postives = 260/383 (67.89%), Query Frame = 1 

Query: 1   MASPLLSLFFLATIIRLPSPSTAYSNSYT--KLALNPIDACWRTNPNWAANRRALADCAV 60
           MAS  L+L  L           AY N YT  KL LNPID+CWR NP+WA NRR+LADCAV
Sbjct: 1   MASLFLTLSLLFAAFSSFIVEAAYGNGYTIPKLLLNPIDSCWRRNPSWAFNRRSLADCAV 60

Query: 61  GFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMV 120
           GFG  A+GGK+GSIYVV +PSDDPE P+PGTLR  VIQ +PLWI FARDMVI L  EL++
Sbjct: 61  GFGKSAVGGKYGSIYVVTNPSDDPENPRPGTLRHAVIQSKPLWITFARDMVIVLRNELIM 120

Query: 121 NSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQS 180
           NS+KTIDGRGAKVEI  GPCITIQ+VSHVIIHGI+I DCKP K GRVRSS TH G R+ S
Sbjct: 121 NSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGS 180

Query: 181 DGDAISVFSSSHIWIDHCSLASCTDGLIDVIHASTAVT---------------------- 240
           DGDAI++F SSHIWIDHC  + C DGLIDV+HASTAVT                      
Sbjct: 181 DGDAIAIFDSSHIWIDHCYFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNV 240

Query: 241 --------ISNNYF--------------------SQHDKWEMYAVGGSADPKIFSQGNYF 300
                   I+ N+F                    ++++KW+MYA+GGSADP IFS+GNYF
Sbjct: 241 EDKNMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYF 300

Query: 301 DAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVA 332
            A DD S KQVTKR      W++WKWR+S DVF NGAYF+PSG+G+ TP+Y R + FPV+
Sbjct: 301 VASDDPSKKQVTKRIDSGYDWRRWKWRTSKDVFKNGAYFVPSGYGTVTPLYGRAEWFPVS 360

[Close]
BLAST of Cp4.1LG10g09820 vs. TrEMBL
Match: M4DT87_BRARP (Pectate lyase OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.3e-114
Identity = 216/385 (56.10%), Postives = 262/385 (68.05%), Query Frame = 1 

Query: 1   MASPLLSLFFLATIIRLPSPSTAY-SNSY---TKLALNPIDACWRTNPNWAANRRALADC 60
           MAS LL++  L   +  P    AY SNSY    K  LNPID+CWR NPNWA+NRRALADC
Sbjct: 1   MASLLLTVSLLFAALSYPLVEAAYYSNSYYTTPKPLLNPIDSCWRRNPNWASNRRALADC 60

Query: 61  AVGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLEREL 120
           AVGFG  A+GGK+GS+YVV +PSD+PE P+PGTLR  VIQ +PLWI FARDMVI L+ EL
Sbjct: 61  AVGFGKAAIGGKYGSVYVVTNPSDNPENPRPGTLRHAVIQSKPLWITFARDMVIVLQNEL 120

Query: 121 MVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQ 180
           ++NS+KTIDGRGAKVEI  G CIT+Q+V+H+IIHGI+I DCKP K GRVRSS TH G R+
Sbjct: 121 IMNSYKTIDGRGAKVEIAYGACITVQHVNHIIIHGISIHDCKPGKSGRVRSSPTHIGSRK 180

Query: 181 QSDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHASTAVT-------------------- 240
            SDGDAI++F SSHIWIDHC  + C DGLIDV+HASTAVT                    
Sbjct: 181 GSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDN 240

Query: 241 ----------ISNNYF--------------------SQHDKWEMYAVGGSADPKIFSQGN 300
                     I+ N+F                    ++++KW+MYA+GGSA+P IFS+GN
Sbjct: 241 NVEDRIMRVTIAFNHFGPGLIERMPRVRLGYAHVANNRYEKWQMYAIGGSANPTIFSEGN 300

Query: 301 YFDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFP 332
           YF A DD S KQVTKR       K+WKWR+S DVF NGAYF+ SG+G+ TP+Y R + FP
Sbjct: 301 YFVASDDLSKKQVTKRIESGYDSKRWKWRTSKDVFKNGAYFVQSGYGTVTPLYGRAEWFP 360

[Close]
BLAST of Cp4.1LG10g09820 vs. TrEMBL
Match: A0A0D3C9S8_BRAOL (Pectate lyase OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 3.0e-114
Identity = 216/385 (56.10%), Postives = 261/385 (67.79%), Query Frame = 1 

Query: 1   MASPLLSLFFLATIIRLPSPSTAY-SNSY---TKLALNPIDACWRTNPNWAANRRALADC 60
           MAS LL++  L      P    AY SNSY    K  LNPID+CWR NPNWA+NRRALADC
Sbjct: 1   MASLLLTVSLLFAAFSYPLVEAAYYSNSYYTTPKPLLNPIDSCWRRNPNWASNRRALADC 60

Query: 61  AVGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLEREL 120
           AVGFG  A+GGK+GS+YVV +PSD+PE P+PGTLR  VIQ +PLWI FARDMVI L+ EL
Sbjct: 61  AVGFGKAAIGGKYGSVYVVTNPSDNPENPRPGTLRHAVIQSKPLWITFARDMVIVLQNEL 120

Query: 121 MVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQ 180
           ++NS+KTIDGRGAKVEI  G CIT+Q+V+H+IIHGI+I DCKP K GRVRSS TH G R+
Sbjct: 121 IMNSYKTIDGRGAKVEIAYGACITVQHVNHIIIHGISIHDCKPGKSGRVRSSPTHIGSRK 180

Query: 181 QSDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHASTAVT-------------------- 240
            SDGDAI++F SSHIWIDHC  + C DGLIDV+HASTAVT                    
Sbjct: 181 GSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDN 240

Query: 241 ----------ISNNYF--------------------SQHDKWEMYAVGGSADPKIFSQGN 300
                     I+ N+F                    ++++KW+MYA+GGSA+P IFS+GN
Sbjct: 241 NVEDRIMRVTIAFNHFGPGLIERMPRVRLGYAHIANNRYEKWQMYAIGGSANPTIFSEGN 300

Query: 301 YFDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFP 332
           YF A DD S KQVTKR       K+WKWR+S DVF NGAYF+ SG+G+ TP+Y R + FP
Sbjct: 301 YFVASDDPSKKQVTKRIESGYDSKRWKWRTSKDVFKNGAYFVQSGYGTVTPLYGRAEWFP 360

[Close]
BLAST of Cp4.1LG10g09820 vs. TAIR10
Match: AT1G11920.1 (AT1G11920.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 438.3 bits (1126), Expect = 4.1e-123
Identity = 218/361 (60.39%), Postives = 255/361 (70.64%), Query Frame = 1 

Query: 23  AYSNSYT--KLALNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSD 82
           AYSN YT  KL  NPID+CWR NP WA+NRRALADCAVGFG  A+GGK+GSIYVV +PSD
Sbjct: 24  AYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGKSAVGGKYGSIYVVTNPSD 83

Query: 83  DPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCIT 142
           DPE P+PGTLR+ VIQ +PLWI FARDMVI L  EL++NS+KTIDGRGAKVEI  GPCIT
Sbjct: 84  DPENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTIDGRGAKVEIAYGPCIT 143

Query: 143 IQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDHCSLAS 202
           IQ+VSHVIIHGI+I DCKP K GRVRSS TH G R+ SDGDAI++F SSHIWIDHC  + 
Sbjct: 144 IQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSDGDAIAIFDSSHIWIDHCFFSR 203

Query: 203 CTDGLIDVIHASTAVT------------------------------ISNNYF-------- 262
           C DGLIDV+HASTAVT                              I+ N+F        
Sbjct: 204 CQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERM 263

Query: 263 ------------SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVYVNGWK 322
                       ++++KW+MYA+GGSADP IFS+GNYF A DD S KQVTKR      WK
Sbjct: 264 PRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPSKKQVTKRIDSGYDWK 323

Query: 323 KWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPLLTDTAGALCCVVGKA 332
           +WKWR+S DVF NGAYF+PSG+G+ TP+Y R + FPV+HGSL PLLT +AG L C  G+ 
Sbjct: 324 RWKWRTSKDVFKNGAYFVPSGYGTVTPLYGRAERFPVSHGSLVPLLTSSAGPLHCYSGRI 383

[Close]
BLAST of Cp4.1LG10g09820 vs. TAIR10
Match: AT4G22080.1 (AT4G22080.1 root hair specific 14)

HSP 1 Score: 388.7 bits (997), Expect = 3.7e-108
Identity = 196/343 (57.14%), Postives = 238/343 (69.39%), Query Frame = 1 

Query: 33  LNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRF 92
           +NP+D+CWR   +WAANR+ LADC VGFGS  LGGK G++YVV +P D+ + P+PG+LR+
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNLYVVTNPYDNAQNPQPGSLRY 105

Query: 93  GVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGI 152
           GVIQ +PLWI FA+DMVITLE ELMVNS+KTIDGRGAKVEI  GPCITIQ+V++VI+HGI
Sbjct: 106 GVIQAKPLWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGI 165

Query: 153 TIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHAS 212
           +I DCKP K G VRSS TH G R+ SDGDAI++F SS+IWIDHC LASCTDGLIDVIHAS
Sbjct: 166 SIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHAS 225

Query: 213 TA------------------------------VTISNNYF-------------------- 272
           T                               VT++ N+F                    
Sbjct: 226 TGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVAN 285

Query: 273 SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFV 326
           +++DKW MYA+GGSADP IFS+GNYF A D S+SK+VTKREV   GW  W+WR+S DVF 
Sbjct: 286 NRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVK-GGWNNWRWRTSKDVFK 345

[Close]
BLAST of Cp4.1LG10g09820 vs. TAIR10
Match: AT4G22090.1 (AT4G22090.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-107
Identity = 199/358 (55.59%), Postives = 241/358 (67.32%), Query Frame = 1 

Query: 19  SPSTA-YSNSYTKLALNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVID 78
           SP+ A Y     +  +NP+D+CWR   +W  NR  LADCAVGFGS  LGGK G+IYVV +
Sbjct: 31  SPAAAPYPAEEPQNIMNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNIYVVTN 90

Query: 79  PSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGP 138
           P D+ + P PG+LR+GVIQ +PLWI FA+DMVITL  ELMVNS+KTIDGRGAKVEI  GP
Sbjct: 91  PYDNAQNPHPGSLRYGVIQAKPLWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGP 150

Query: 139 CITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDHCS 198
           CITIQ+V++VI+HGI+I DCKP K G+VRSS TH G R+ SDGDAI++F SS++WIDHC 
Sbjct: 151 CITIQDVTNVIVHGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCY 210

Query: 199 LASCTDGLIDVIHASTA------------------------------VTISNNYF----- 258
           LASCTDGLIDVIHASTA                              VT++ N+F     
Sbjct: 211 LASCTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLV 270

Query: 259 ---------------SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVYVN 318
                          +++DKW MYA+GGSADP IFS+GNYF A D S SK+VTKREV   
Sbjct: 271 ERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVK-G 330

Query: 319 GWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPLLTDTAGALCC 326
           GW  W+WR+SNDVF NGA+F+PSG+GS    Y+  Q F VA G+L P LT  AG L C
Sbjct: 331 GWNNWRWRTSNDVFKNGAFFVPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNC 387

[Close]
BLAST of Cp4.1LG10g09820 vs. TAIR10
Match: AT4G13710.1 (AT4G13710.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 293.5 bits (750), Expect = 1.6e-79
Identity = 162/350 (46.29%), Postives = 210/350 (60.00%), Query Frame = 1 

Query: 34  NPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSD-DPEYPKPGTLRF 93
           NPID CWR + NW  NR+ LADC +GFG +A+GG+ G  Y+V DP+D D   PKPGTLR 
Sbjct: 122 NPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRH 181

Query: 94  GVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGI 153
            VIQEEPLWIVF RDMVI L++EL++NSFKTID RG+ V I NG CITIQ +++VIIHG+
Sbjct: 182 AVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGL 241

Query: 154 TIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDH-----C----------- 213
            I DCKP     VRSS +H G R  +DGDA+S+F SSHIWIDH     C           
Sbjct: 242 HIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGS 301

Query: 214 -------SLASCTDGLIDVIHAST-------AVTISNNYFSQ------------------ 273
                  +  +  + ++ + H+ +        VTI+ N+F +                  
Sbjct: 302 TAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVN 361

Query: 274 --HDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKR-EVYVNGWKKWKWRSSNDVF 332
             +  WEMYA+GGSA+P I SQGN + AP D  +K+VTKR E   + WKKW WRS  D+ 
Sbjct: 362 NDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLL 421

[Close]
BLAST of Cp4.1LG10g09820 vs. TAIR10
Match: AT1G04680.1 (AT1G04680.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 291.6 bits (745), Expect = 6.2e-79
Identity = 162/352 (46.02%), Postives = 201/352 (57.10%), Query Frame = 1 

Query: 34  NPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSDD-PEYPKPGTLRF 93
           NPID CWR +PNW  NR+ LADC +GFG +A+GG+ G  YVV DP DD P  P+PGTLR 
Sbjct: 81  NPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRH 140

Query: 94  GVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGI 153
            VIQ+ PLWIVF RDMVI L++EL+VNSFKTIDGRGA V I NG CITIQ V++VI+HG+
Sbjct: 141 AVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGL 200

Query: 154 TIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDH----------------- 213
            I DCKP     VRSS TH G R  +DGDAIS+F SSH+WIDH                 
Sbjct: 201 HIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGS 260

Query: 214 ---------------CSLASCTDGLIDVIHASTAVTISNNYF------------------ 273
                            L   +D  +     +  VTI+ N+F                  
Sbjct: 261 TAITISNNHLTHHNEVMLLGHSDSYMR--DKAMQVTIAYNHFGVGLIQRMPRCRHGYFHV 320

Query: 274 --SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKR-EVYVNGWKKWKWRSSND 332
             + +  WEMYA+GGSA+P I SQGN + AP +  +K+VTKR +   + WK W WRS  D
Sbjct: 321 VNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGD 380

[Close]
BLAST of Cp4.1LG10g09820 vs. NCBI nr
Match: gi|778722519|ref|XP_004134978.2| (PREDICTED: putative pectate lyase 2 [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 1.2e-145
Identity = 267/384 (69.53%), Postives = 289/384 (75.26%), Query Frame = 1 

Query: 1   MASPLLS---LFFLATIIRLPSPSTAYSNSYTKLALNPIDACWRTNPNWAANRRALADCA 60
           MASPLL    LFFL T+I  P P+    N Y+K +LNPIDACWR N NWAANRRALADCA
Sbjct: 1   MASPLLLSAFLFFLPTVISTPKPN----NYYSKPSLNPIDACWRNNRNWAANRRALADCA 60

Query: 61  VGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELM 120
           VGFGSDALGGKFGSIYVV DPSDDPEYP+PGTLRFGVIQ +PLWIVFARDMVITL+RELM
Sbjct: 61  VGFGSDALGGKFGSIYVVTDPSDDPEYPEPGTLRFGVIQMQPLWIVFARDMVITLKRELM 120

Query: 121 VNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQ 180
           VNS+KTIDGRGA VEI NGPCITIQNVSHVIIHGI+I DCKP KPGRVRSS+THCGDRQQ
Sbjct: 121 VNSYKTIDGRGANVEISNGPCITIQNVSHVIIHGISIHDCKPGKPGRVRSSVTHCGDRQQ 180

Query: 181 SDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHA-------------------------- 240
           SDGDAIS+FSSSHIWIDHC LA CTDGLIDVIHA                          
Sbjct: 181 SDGDAISIFSSSHIWIDHCYLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEF 240

Query: 241 ----STAVTISNNYFSQ--------------------HDKWEMYAVGGSADPKIFSQGNY 300
                  VT++ N F                      ++KWEMYA+GGSADP IFSQGNY
Sbjct: 241 RDDRIMRVTVAFNRFGAGLVQRMPRVRFGYAHVANNWYNKWEMYAMGGSADPTIFSQGNY 300

Query: 301 FDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPV 332
           F AP+D  SKQVTKREVY +GWK WKWRSSNDVF+NGAYFIP+GWGSCTP YT+ QAFPV
Sbjct: 301 FMAPNDPFSKQVTKREVYESGWKSWKWRSSNDVFMNGAYFIPTGWGSCTPFYTQAQAFPV 360

[Close]
BLAST of Cp4.1LG10g09820 vs. NCBI nr
Match: gi|659079016|ref|XP_008440030.1| (PREDICTED: putative pectate lyase 2 [Cucumis melo])

HSP 1 Score: 521.5 bits (1342), Expect = 1.0e-144
Identity = 266/385 (69.09%), Postives = 288/385 (74.81%), Query Frame = 1 

Query: 1   MASPLL--SLF--FLATIIRLPSPSTAYSNSYTKLALNPIDACWRTNPNWAANRRALADC 60
           MA PLL  S+F  FL TII  P P+  Y      ++LNPIDACWR NPNWAANRRALADC
Sbjct: 1   MAFPLLLLSIFLSFLPTIISTPKPNNYYDKP---ISLNPIDACWRNNPNWAANRRALADC 60

Query: 61  AVGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLEREL 120
           AVGFGSDALGGKFGSIYVV DPSDDPEYP+PGTLRFGVIQ +PLWIVFARDM ITL+REL
Sbjct: 61  AVGFGSDALGGKFGSIYVVTDPSDDPEYPEPGTLRFGVIQLKPLWIVFARDMAITLKREL 120

Query: 121 MVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQ 180
           MVNSFKTIDGRGAKVEI NGPC+TIQNVSHVIIHGI+I DCKP KPGRVRS++THCGDRQ
Sbjct: 121 MVNSFKTIDGRGAKVEISNGPCVTIQNVSHVIIHGISIHDCKPGKPGRVRSTVTHCGDRQ 180

Query: 181 QSDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHA------------------------- 240
           +SDGDAIS+FSSSHIWIDHC LA CTDGLIDVIHA                         
Sbjct: 181 ESDGDAISIFSSSHIWIDHCYLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDE 240

Query: 241 -----STAVTISNNYFSQ--------------------HDKWEMYAVGGSADPKIFSQGN 300
                   VT++ N F                      ++KWEMYA+GGSADP IFSQGN
Sbjct: 241 FRDDRIMRVTVAFNRFGAGLVQRMPRVRFGYAHVANNWYNKWEMYAMGGSADPTIFSQGN 300

Query: 301 YFDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFP 332
           YF APDD  SKQVTKREVY +GWK WKWRSSNDVF+NGAYFIP+GWGSCTP YTR QAFP
Sbjct: 301 YFMAPDDPFSKQVTKREVYESGWKTWKWRSSNDVFMNGAYFIPTGWGSCTPFYTRAQAFP 360

[Close]
BLAST of Cp4.1LG10g09820 vs. NCBI nr
Match: gi|565491926|ref|XP_006303602.1| (hypothetical protein CARUB_v10011187mg [Capsella rubella])

HSP 1 Score: 439.9 bits (1130), Expect = 4.0e-120
Identity = 222/385 (57.66%), Postives = 265/385 (68.83%), Query Frame = 1 

Query: 1   MASPLLSLFFLATIIRLPSPSTAYSNSYT----KLALNPIDACWRTNPNWAANRRALADC 60
           MAS  L++  L           AYSN YT    KL+LNPID+CWR NP WA NRRALADC
Sbjct: 1   MASLFLTVSLLLAAFSSSLVEAAYSNGYTYTIPKLSLNPIDSCWRRNPGWAYNRRALADC 60

Query: 61  AVGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLEREL 120
           AVGFG  A+GGK+GS+YVV +P+DDPE P+PGTLR  VIQ +PLWI FARDMVI L+ EL
Sbjct: 61  AVGFGKAAVGGKYGSVYVVTNPTDDPENPRPGTLRHAVIQAKPLWITFARDMVIVLQNEL 120

Query: 121 MVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQ 180
           ++NS+KTIDGRGAKVEI  GPCITIQ+VSHVIIHGI+I DCKP K GRVRSS TH G+R+
Sbjct: 121 IMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHIGNRK 180

Query: 181 QSDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHASTAVT-------------------- 240
            SDGDAI++F SSHIWIDHC  + C DGLIDV+HASTAVT                    
Sbjct: 181 GSDGDAIAIFDSSHIWIDHCHFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDN 240

Query: 241 ----------ISNNYF--------------------SQHDKWEMYAVGGSADPKIFSQGN 300
                     I+ N+F                    ++++KW+MYA+GGSADP IFS+GN
Sbjct: 241 NVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGN 300

Query: 301 YFDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFP 332
           YF APDDSS KQVTKR      W++WKWR+S DVF NGAYF+PSG+G+ TP+Y R + FP
Sbjct: 301 YFVAPDDSSKKQVTKRIDSGYDWRRWKWRTSKDVFKNGAYFVPSGYGTVTPLYKRAEWFP 360

[Close]
BLAST of Cp4.1LG10g09820 vs. NCBI nr
Match: gi|15221143|ref|NP_172656.1| (putative pectate lyase [Arabidopsis thaliana])

HSP 1 Score: 438.3 bits (1126), Expect = 1.2e-119
Identity = 218/361 (60.39%), Postives = 255/361 (70.64%), Query Frame = 1 

Query: 23  AYSNSYT--KLALNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSD 82
           AYSN YT  KL  NPID+CWR NP WA+NRRALADCAVGFG  A+GGK+GSIYVV +PSD
Sbjct: 24  AYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVGFGKSAVGGKYGSIYVVTNPSD 83

Query: 83  DPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCIT 142
           DPE P+PGTLR+ VIQ +PLWI FARDMVI L  EL++NS+KTIDGRGAKVEI  GPCIT
Sbjct: 84  DPENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTIDGRGAKVEIAYGPCIT 143

Query: 143 IQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDHCSLAS 202
           IQ+VSHVIIHGI+I DCKP K GRVRSS TH G R+ SDGDAI++F SSHIWIDHC  + 
Sbjct: 144 IQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSDGDAIAIFDSSHIWIDHCFFSR 203

Query: 203 CTDGLIDVIHASTAVT------------------------------ISNNYF-------- 262
           C DGLIDV+HASTAVT                              I+ N+F        
Sbjct: 204 CQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERM 263

Query: 263 ------------SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVYVNGWK 322
                       ++++KW+MYA+GGSADP IFS+GNYF A DD S KQVTKR      WK
Sbjct: 264 PRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPSKKQVTKRIDSGYDWK 323

Query: 323 KWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPLLTDTAGALCCVVGKA 332
           +WKWR+S DVF NGAYF+PSG+G+ TP+Y R + FPV+HGSL PLLT +AG L C  G+ 
Sbjct: 324 RWKWRTSKDVFKNGAYFVPSGYGTVTPLYGRAERFPVSHGSLVPLLTSSAGPLHCYSGRI 383

[Close]
BLAST of Cp4.1LG10g09820 vs. NCBI nr
Match: gi|1009108184|ref|XP_015883447.1| (PREDICTED: putative pectate lyase 2 [Ziziphus jujuba])

HSP 1 Score: 436.0 bits (1120), Expect = 5.7e-119
Identity = 216/366 (59.02%), Postives = 257/366 (70.22%), Query Frame = 1 

Query: 18  PSPSTAYSNSYTKLA--LNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVV 77
           P P ++Y    T     +N ID+CW++ PNWA NR+ALADCAVGFG DA+GGK+G IY+V
Sbjct: 33  PEPISSYIYGITSKTNTMNVIDSCWQSKPNWANNRQALADCAVGFGKDAMGGKYGKIYLV 92

Query: 78  IDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGN 137
             P+DDP  PKPGTLR+GVIQ +PLWI+FA+DMVITL+ EL+VNSFKTIDGRGAKVEI N
Sbjct: 93  TSPADDPVNPKPGTLRYGVIQTQPLWIIFAKDMVITLKNELIVNSFKTIDGRGAKVEIAN 152

Query: 138 GPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSLTHCGDRQQSDGDAISVFSSSHIWIDH 197
           GPCIT+Q VSHVIIHGI+I DCKP   G VRSS TH G R  SDGDAIS+F SSH+W+DH
Sbjct: 153 GPCITVQGVSHVIIHGISIHDCKPGYAGLVRSSPTHVGQRLGSDGDAISIFGSSHVWVDH 212

Query: 198 CSLASCTDGLIDVIHASTA------------------------------VTISNNYF--- 257
           C +A CTDGL+DVIHASTA                              VTI+ N F   
Sbjct: 213 CFMARCTDGLVDVIHASTAITISNNYFSQHDKVMLLGHNDKYRADKIMRVTIAFNRFGAG 272

Query: 258 -----------------SQHDKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVY 317
                            +++D+W+MYA+GGSA+P IFS+GNYF AP++ +SK+VTKREV 
Sbjct: 273 LIERMPRVRFGYAHVANNRYDEWQMYALGGSANPTIFSEGNYFVAPNNINSKEVTKREVK 332

Query: 318 VNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPLLTDTAGALCC 332
             GWK WKWRSSNDVF NGAYF+ SGWGSC P+YT  Q+F VA G + P LT TAG L C
Sbjct: 333 -KGWKDWKWRSSNDVFKNGAYFVQSGWGSCYPLYTPTQSFKVAPGDMVPALTSTAGPLPC 392

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g09820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PLY2_ARATH7.2e-12260.39Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=3 SV=2[more]
PLY16_ARATH6.6e-10757.14Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1[more]
PLY17_ARATH4.3e-10655.59Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1[more]
PLY15_ARATH2.9e-7846.29Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1[more]
PLY1_ARATH1.1e-7746.02Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2[more]
BLAST of Cp4.1LG10g09820 vs. TrEMBL
Match NameE-valueIdentityDescription
R0IE75_9BRAS2.8e-12057.66Pectate lyase OS=Capsella rubella GN=CARUB_v10011187mg PE=3 SV=1[more]
A0A0A0LU35_CUCSA2.6e-11858.29Pectate lyase OS=Cucumis sativus GN=Csa_1G059200 PE=3 SV=1[more]
D7KN70_ARALL3.4e-11857.70Pectate lyase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_312221 PE=3 SV=1[more]
M4DT87_BRARP2.3e-11456.10Pectate lyase OS=Brassica rapa subsp. pekinensis PE=3 SV=1[more]
A0A0D3C9S8_BRAOL3.0e-11456.10Pectate lyase OS=Brassica oleracea var. oleracea PE=3 SV=1[more]
BLAST of Cp4.1LG10g09820 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G11920.14.1e-12360.39 Pectin lyase-like superfamily protein[more]
AT4G22080.13.7e-10857.14 root hair specific 14[more]
AT4G22090.12.4e-10755.59 Pectin lyase-like superfamily protein[more]
AT4G13710.11.6e-7946.29 Pectin lyase-like superfamily protein[more]
AT1G04680.16.2e-7946.02 Pectin lyase-like superfamily protein[more]
BLAST of Cp4.1LG10g09820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778722519|ref|XP_004134978.2|1.2e-14569.53PREDICTED: putative pectate lyase 2 [Cucumis sativus][more]
gi|659079016|ref|XP_008440030.1|1.0e-14469.09PREDICTED: putative pectate lyase 2 [Cucumis melo][more]
gi|565491926|ref|XP_006303602.1|4.0e-12057.66hypothetical protein CARUB_v10011187mg [Capsella rubella][more]
gi|15221143|ref|NP_172656.1|1.2e-11960.39putative pectate lyase [Arabidopsis thaliana][more]
gi|1009108184|ref|XP_015883447.1|5.7e-11959.02PREDICTED: putative pectate lyase 2 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018082AmbAllergen
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
IPR002022Pec_lyase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045490 pectin catabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
molecular_function GO:0030570 pectate lyase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g09820.1Cp4.1LG10g09820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002022Pectate lyase/Amb allergenPFAMPF00544Pec_lyase_Ccoord: 116..230
score: 1.3
IPR002022Pectate lyase/Amb allergenSMARTSM00656amb_allcoord: 107..254
score: 1.1
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 34..322
score: 8.1
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 227..322
score: 3.4E-14coord: 34..226
score: 6.2
IPR018082AmbAllergenPRINTSPR00807AMBALLERGENcoord: 79..104
score: 2.9E-39coord: 115..131
score: 2.9E-39coord: 56..73
score: 2.9E-39coord: 179..200
score: 2.9
NoneNo IPR availablePANTHERPTHR31683FAMILY NOT NAMEDcoord: 31..331
score: 9.1E
NoneNo IPR availablePANTHERPTHR31683:SF18PECTATE LYASE 2-RELATEDcoord: 31..331
score: 9.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g09820Cucsa.045020Cucumber (Gy14) v1cgycpeB0033
Cp4.1LG10g09820Cucsa.085530Cucumber (Gy14) v1cgycpeB0157
Cp4.1LG10g09820CmaCh13G007570Cucurbita maxima (Rimu)cmacpeB219
Cp4.1LG10g09820CmaCh03G005500Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g09820CmoCh13G007880Cucurbita moschata (Rifu)cmocpeB188
Cp4.1LG10g09820CmoCh03G005740Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g09820Cla019359Watermelon (97103) v1cpewmB070
Cp4.1LG10g09820Cla014431Watermelon (97103) v1cpewmB073
Cp4.1LG10g09820Csa1G059200Cucumber (Chinese Long) v2cpecuB055
Cp4.1LG10g09820Csa6G513500Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g09820MELO3C002431Melon (DHL92) v3.5.1cpemeB049
Cp4.1LG10g09820MELO3C007411Melon (DHL92) v3.5.1cpemeB071
Cp4.1LG10g09820ClCG01G021750Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g09820ClCG03G004510Watermelon (Charleston Gray)cpewcgB070
Cp4.1LG10g09820CSPI06G33350Wild cucumber (PI 183967)cpecpiB080
Cp4.1LG10g09820CSPI01G10340Wild cucumber (PI 183967)cpecpiB050
Cp4.1LG10g09820Lsi01G004490Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g09820Lsi02G005730Bottle gourd (USVL1VR-Ls)cpelsiB057
Cp4.1LG10g09820MELO3C007411.2Melon (DHL92) v3.6.1cpemedB091
Cp4.1LG10g09820MELO3C002431.2Melon (DHL92) v3.6.1cpemedB063
Cp4.1LG10g09820CsaV3_1G010410Cucumber (Chinese Long) v3cpecucB0059
Cp4.1LG10g09820CsaV3_6G048810Cucumber (Chinese Long) v3cpecucB0092
Cp4.1LG10g09820Bhi08G001482Wax gourdcpewgoB0108
Cp4.1LG10g09820CsGy6G032880Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g09820CsGy1G010350Cucumber (Gy14) v2cgybcpeB023
Cp4.1LG10g09820Carg07558Silver-seed gourdcarcpeB1397
Cp4.1LG10g09820Carg13683Silver-seed gourdcarcpeB1288
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG10g09820Cp4.1LG20g03400Cucurbita pepo (Zucchini)cpecpeB086
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g09820Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g09820Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g09820Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g09820Silver-seed gourdcarcpeB0913
Cp4.1LG10g09820Wax gourdcpewgoB0097