Cp4.1LG10g09620 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG10g09620
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin, putative
LocationCp4.1LG10 : 4522979 .. 4523794 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGTTGTTCGTACCTGAGAAAGGAGAGGCCTTCGCCATTGAAGTTGGTTTCTTCGATACCGTTTTGGAAATCAAAGAGAAGATTCAAAAATATCACCATATCCCCATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCCAAGACGACCGCGACGTTGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTAGCTTCCGAATCCCAAAACAATTCCCAATCCCAACCCCAATCCCAACCCCAAATCGACCCGAACCATTCAATCGGGCGCCTCAAACAGAGGATCCACGACATCAACTCTGTGGGCCCCATCAACGGGATCATGCTCCAATCCAACGCCTCCACTACTGAGTTACAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTCCGAAGTTGAGGTTTGTTTACGGCCGTCGCCTACGGTTTCGACCGCTGCGCCCGGGATGACAACGCCGCCGCCGCCGCCACAGCCGTCGACAACAACAGCAGCGGCTGGGACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAACCCAACCGATAACGTGGGGGAATTAAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTACATTTTCATCTGCCACCGGAGGGTTTCTTTTTCATTTATGACCGCGATGTTATGGACGAAGACCGGTCCTTCCGTTGGCATGGTGTGGCCCAGGGCGATACAATTGAGATCTTCAATGGCAGCGTTTCTGGCGGATCTTAA

mRNA sequence

ATGGATGTGTTGTTCGTACCTGAGAAAGGAGAGGCCTTCGCCATTGAAGTTGGTTTCTTCGATACCGTTTTGGAAATCAAAGAGAAGATTCAAAAATATCACCATATCCCCATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCCAAGACGACCGCGACGTTGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTAGCTTCCGAATCCCAAAACAATTCCCAATCCCAACCCCAATCCCAACCCCAAATCGACCCGAACCATTCAATCGGGCGCCTCAAACAGAGGATCCACGACATCAACTCTGTGGGCCCCATCAACGGGATCATGCTCCAATCCAACGCCTCCACTACTGAGTTACAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTCCGAAGTTGAGGTTTGTTTACGGCCGTCGCCTACGGTTTCGACCGCTGCGCCCGGGATGACAACGCCGCCGCCGCCGCCACAGCCGTCGACAACAACAGCAGCGGCTGGGACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAACCCAACCGATAACGTGGGGGAATTAAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTACATTTTCATCTGCCACCGGAGGGTTTCTTTTTCATTTATGACCGCGATGTTATGGACGAAGACCGGTCCTTCCGTTGGCATGGTGTGGCCCAGGGCGATACAATTGAGATCTTCAATGGCAGCGTTTCTGGCGGATCTTAA

Coding sequence (CDS)

ATGGATGTGTTGTTCGTACCTGAGAAAGGAGAGGCCTTCGCCATTGAAGTTGGTTTCTTCGATACCGTTTTGGAAATCAAAGAGAAGATTCAAAAATATCACCATATCCCCATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCCAAGACGACCGCGACGTTGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTAGCTTCCGAATCCCAAAACAATTCCCAATCCCAACCCCAATCCCAACCCCAAATCGACCCGAACCATTCAATCGGGCGCCTCAAACAGAGGATCCACGACATCAACTCTGTGGGCCCCATCAACGGGATCATGCTCCAATCCAACGCCTCCACTACTGAGTTACAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTCCGAAGTTGAGGTTTGTTTACGGCCGTCGCCTACGGTTTCGACCGCTGCGCCCGGGATGACAACGCCGCCGCCGCCGCCACAGCCGTCGACAACAACAGCAGCGGCTGGGACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAACCCAACCGATAACGTGGGGGAATTAAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTACATTTTCATCTGCCACCGGAGGGTTTCTTTTTCATTTATGACCGCGATGTTATGGACGAAGACCGGTCCTTCCGTTGGCATGGTGTGGCCCAGGGCGATACAATTGAGATCTTCAATGGCAGCGTTTCTGGCGGATCTTAA

Protein sequence

MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEILQHSRIQLLVASESQNNSQSQPQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTPPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS
BLAST of Cp4.1LG10g09620 vs. TrEMBL
Match: V4U8Q0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018056mg PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.0e-72
Identity = 157/295 (53.22%), Postives = 204/295 (69.15%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQ---NNSQSQPQSQPQI---------------------DPNHSIG 120
           ILQ+SRIQLLVAS+++      QS P  +  +                     D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA 180
           RLK++IH++ S+ P+N +++QS+ +  ELQD RSLRD E+ +N+E++V +RPSPT +   
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQSSGA--ELQDHRSLRDCELMDNAEIDVHVRPSPTAT--- 180

Query: 181 PGMTTPPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKK 240
                       STT+        SG    KLK++V  + GN +IP+EVN +DNV EL+K
Sbjct: 181 ------------STTS--------SGMGSRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 240

Query: 241 ELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
           ELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

BLAST of Cp4.1LG10g09620 vs. TrEMBL
Match: A0A067G7E3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044874mg PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.3e-72
Identity = 157/295 (53.22%), Postives = 204/295 (69.15%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQ---NNSQSQPQSQPQI---------------------DPNHSIG 120
           ILQ+SRIQLLVAS+++      QS P  +  +                     D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA 180
           RLK++IH++ S+ P+N +++QS+ +  ELQD RSLRD E+ +N+E++V +RPSPT +   
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQSSGA--ELQDHRSLRDCELMDNAEIDVHVRPSPTAT--- 180

Query: 181 PGMTTPPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKK 240
                       STT+        SG    KLK++V  + GN +IP+EVN +DNV EL+K
Sbjct: 181 ------------STTS--------SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 240

Query: 241 ELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
           ELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

BLAST of Cp4.1LG10g09620 vs. TrEMBL
Match: B9RXR6_RICCO (Ubiquitin, putative OS=Ricinus communis GN=RCOM_0905760 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 3.1e-69
Identity = 159/294 (54.08%), Postives = 198/294 (67.35%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F   KG  F+IE+G+FDTVLEIKEKIQKY  IPI KQTL+FNG VLQD+RD+E+CE
Sbjct: 1   MDVFFETPKGRQFSIELGYFDTVLEIKEKIQKYQDIPINKQTLVFNGQVLQDERDIEYCE 60

Query: 61  ILQHSRIQLLVASESQNNS------QSQPQSQP----------------QIDPNHSIGRL 120
           IL +S IQLL+A ++          +S P S+                 ++D N +I RL
Sbjct: 61  ILHNSHIQLLIAPDNDETKPQIKTEESSPPSKKIQLSIKIPSSKLHVPIEMDVNDTILRL 120

Query: 121 KQRIHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPT-VSTAAP 180
           K++IH+I SV P++ ++LQS  S  EL D RSLR+SE+ +NSE+ V +RPSPT + T + 
Sbjct: 121 KEKIHEIESV-PVSRLVLQS--SNGELLDNRSLRESELLDNSEISVNIRPSPTGLGTGSG 180

Query: 181 GMTTPPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKE 240
           G T              AGT         KLK+MV  K G  KIP+EVN +DNVGEL+KE
Sbjct: 181 GPT--------------AGT--------KKLKLMVLTKCGTQKIPVEVNASDNVGELRKE 240

Query: 241 LQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
           LQKL QRLHFHLP EG+FFIY ++VMD+DRSFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 LQKLHQRLHFHLPQEGYFFIYKQNVMDDDRSFRWHHVCQGDTIEIFNGSVTGGS 269

BLAST of Cp4.1LG10g09620 vs. TrEMBL
Match: A0A061GGR6_THECC (Ubiquitin, putative OS=Theobroma cacao GN=TCM_030159 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.1e-69
Identity = 157/291 (53.95%), Postives = 201/291 (69.07%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F  ++G +F+IEVGFFDTVLEIKEK+QKY  IPI +QTL+FNG VLQD+RDVE+CE
Sbjct: 1   MDVTFECQRGRSFSIEVGFFDTVLEIKEKVQKYQGIPISRQTLVFNGQVLQDERDVEYCE 60

Query: 61  ILQHSRIQLLVASESQN-----NSQSQPQSQPQI---------------DPNHSIGRLKQ 120
           ILQ+S IQLLVA E+         +S P  + Q+               D N ++ RLK+
Sbjct: 61  ILQNSSIQLLVAPEADKPQVVKTEKSSPSKKLQLKINIPSSKASIPLEMDVNDTVLRLKE 120

Query: 121 RIHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMT 180
           +I ++  V P+N +++QS+ +  ELQD  SLRD E+ +N+E++V ++PSPT S       
Sbjct: 121 KIREMEPV-PVNRLVVQSSGA--ELQDHLSLRDCELPDNTEIDVNIKPSPTGSG------ 180

Query: 181 TPPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQK 240
                      T +AG  AT+G+ K  LKVMV PK G  KIP+EVN +DNV EL+KELQK
Sbjct: 181 -----------TGSAG--ATTGT-KRLLKVMVLPKCGTKKIPVEVNASDNVAELRKELQK 240

Query: 241 LQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
           LQQRL FHLP EG+FFIY ++VMD+DRSFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 LQQRLQFHLPQEGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 268

BLAST of Cp4.1LG10g09620 vs. TrEMBL
Match: A0A0D2VGU1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G016700 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.4e-68
Identity = 156/288 (54.17%), Postives = 196/288 (68.06%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F  +KG+ F+IEVGFFDTVLEIKEKI KYH IPIP QTLIFNGHVLQDDRDVE+CE
Sbjct: 1   MDVIFETQKGKPFSIEVGFFDTVLEIKEKIHKYHGIPIPHQTLIFNGHVLQDDRDVEYCE 60

Query: 61  ILQHSRIQLLVASESQ-NNSQSQPQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQS- 120
           ILQ+SRIQLLV+S+S  +NS  QPQ       +H +    ++I  +NS  P +  ++ S 
Sbjct: 61  ILQNSRIQLLVSSDSDTSNSTKQPQPNAAA-ADHQLPSPAKKI-QLNSNTPSSNTVVPSE 120

Query: 121 ---NASTTELQ------------DQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTPP 180
              N +   L+            D  S R+ E++ENS+V+V ++PSPT            
Sbjct: 121 TDVNYNPLRLKEKIHGQMDPVPVDSLSSRECELAENSDVDVNIKPSPT------------ 180

Query: 181 PPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQ 240
                 + T +AGT A + ++  KLK++V PK G  KIP+EVN TDNV EL+KELQKL Q
Sbjct: 181 -----GSGTGSAGTTAGTPTAAKKLKLLVLPKCGTKKIPVEVNATDNVSELRKELQKLHQ 240

Query: 241 RLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
           RLHF LP EG+FFIY ++VMD+DRSFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 RLHFQLPQEGYFFIYKQNVMDDDRSFRWHQVGQGDTIEIFNGSVTGGS 269

BLAST of Cp4.1LG10g09620 vs. TAIR10
Match: AT4G05230.1 (AT4G05230.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 3.8e-26
Identity = 80/186 (43.01%), Postives = 105/186 (56.45%), Query Frame = 1

Query: 98  LKQRIHDINSVGPING--IMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTA 157
           +KQ+I     + P++   ++ Q N     LQD   +    +  +S +++ +         
Sbjct: 26  IKQKIEKYQRI-PVSKQTLLFQGNV----LQDHLDIEQCVILNHSRIQLSISSPDQSRNN 85

Query: 158 APGMTTPPPPPQPSTTTAAAG----TVATSGSSKN------KLKVMVQPKFGNSKIPMEV 217
                T   P   ST   + G    TV    S+ N      KL+VMV PK G  KIP++V
Sbjct: 86  IQVFKTEQFPQSNSTEQTSNGHHESTVMIPMSNNNNNNNPKKLRVMVLPKSGTRKIPVDV 145

Query: 218 NPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNG 272
           N  DNVGEL+KEL K+QQR    LP EG+FFIY ++VMDE+RSFRWH V QGDTIEIFNG
Sbjct: 146 NAGDNVGELRKELAKIQQRFQLSLPQEGYFFIYKQNVMDENRSFRWHRVDQGDTIEIFNG 205

BLAST of Cp4.1LG10g09620 vs. TAIR10
Match: AT4G05260.1 (AT4G05260.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 2.4e-20
Identity = 85/269 (31.60%), Postives = 132/269 (49.07%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F  + G  F IE+G++DTVLEIK+KI+KY  IP+P QTL F G+ L+D  D+  C+
Sbjct: 1   MDVYFETQNGRKFCIELGYWDTVLEIKKKIEKYQRIPVPNQTLFF-GNALEDHLDIGQCK 60

Query: 61  ILQHSRIQLLVASESQNNSQS--QPQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQS 120
           ILQ+S + L V  +  +N+    Q + QP I  +   G       D+    P+   ++ +
Sbjct: 61  ILQNSHVVLFVLPDPNDNNDQVLQTEEQPPIIGDLIYG------EDL----PLTTEVVLN 120

Query: 121 NASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTPPPPPQPSTTTAAAGTV 180
                 +QD   +R+++ S  S+    +      S       TPP       T      +
Sbjct: 121 IRPFCPVQDS-PVRNNDQSPPSDAAKDIIKGHQDSPVRNNEQTPPSDSVKENT-----NI 180

Query: 181 ATSGSSKNKLKVMVQPKFGNSKIPMEVN----PTDNVGELKKELQKLQQRLHFHLPPEG- 240
             S   K  L + V P  G  K    ++     T  V  L++EL + + R H   P +G 
Sbjct: 181 QDSPVGKIILTLRVMPYSGKIKAAKNLHFITYKTYRVKMLRQELVQNELRDHLDRPQDGD 240

Query: 241 FFFIYDRDVMDEDRSFRWHGVAQGDTIEI 263
           +FF++   V++ED+SF W+ VA  D +EI
Sbjct: 241 YFFVHKGRVLNEDQSFEWNSVAHTDIVEI 252

BLAST of Cp4.1LG10g09620 vs. TAIR10
Match: AT4G03370.1 (AT4G03370.1 Ubiquitin family protein)

HSP 1 Score: 95.1 bits (235), Expect = 6.9e-20
Identity = 86/291 (29.55%), Postives = 128/291 (43.99%), Query Frame = 1

Query: 8   EKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEILQHSRI 67
           E G  F+I++G  DTVL  K KI+    IP+ +QT+ F G +L+D  D+   +ILQ+  +
Sbjct: 8   ESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLL 67

Query: 68  QLLVASESQNNSQSQPQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNASTTELQD 127
            L + S   N +Q+Q    P  +P H   + +    D       N ++L           
Sbjct: 68  HLSI-SPDDNPTQNQVPQSPS-NPIHEFVKNQDSAEDKK-----NPVLLHQTGKPPLPPK 127

Query: 128 QRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTPPPPPQPSTTTAAAG----------- 187
              L     S+N          P ++   P +  P       T+    G           
Sbjct: 128 SSPLTTENFSKNQ------HDRPVITKMVPELLGP-----QGTSPVTVGRRRNRDQEVQN 187

Query: 188 -TVATSGSSKNKLKVMVQPKFGNSK------------------IPMEVNPTDNVGELKKE 247
              ++S S K  + +   P    +K                  I +EVN   NV  L+KE
Sbjct: 188 RVSSSSDSVKEVINIPDTPARKKTKNYPLKITVMVQPFEETRRIQVEVNVLSNVEVLRKE 247

Query: 248 LQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVS 269
           L K+Q+R   +LP EGFFFI+ +DV+ ED+SF  + VA GDTIEIF G V+
Sbjct: 248 LVKMQERGELNLPHEGFFFIHKQDVLREDQSFMANRVAPGDTIEIFQGYVT 280

BLAST of Cp4.1LG10g09620 vs. TAIR10
Match: AT4G02950.1 (AT4G02950.1 Ubiquitin family protein)

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18
Identity = 92/287 (32.06%), Postives = 137/287 (47.74%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           + V+   + G +F I+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+
Sbjct: 36  ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95

Query: 61  ILQHSRIQLLVASESQNNSQSQPQSQPQIDPNHSIGRLKQRIHDI--NSVGPINGIMLQS 120
           I  +SRI L ++ +        PQ+      N S       IH+   N   P++    QS
Sbjct: 96  IRHNSRILLSISPDDNPTQNQVPQT------NQSPSTPSNPIHEFVNNQDSPLSP---QS 155

Query: 121 NASTTEL-----QDQRSLR----------DSEMSENSEVEVCLRPSPTVSTAAPGMTTPP 180
           +A T E      QD+  L            S  S + +  +  R S TV+  +       
Sbjct: 156 SALTMEKFSKNQQDRPPLMRVVAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRNRDQE 215

Query: 181 PPPQPSTTTAAAGTVAT-SGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQ 240
              + S+ + +   V   + S   K+ VM+QP      I +EV   DNV EL+KEL K+Q
Sbjct: 216 VKNRESSPSDSVEEVINFTDSPAMKMIVMLQPYGYTRMIQVEVTADDNVEELRKELVKMQ 275

Query: 241 QRLHFHLPPEGFFFIYDRD--VMDEDRSFRWHGVAQGDTIEIFNGSV 268
           +R   +LP   ++ I+     V+ ED+SF  +GVA GDTI+I  G V
Sbjct: 276 ERGELNLPQGMYYLIHKHKQAVLHEDQSFLTNGVAYGDTIQISQGYV 313

BLAST of Cp4.1LG10g09620 vs. TAIR10
Match: AT4G03360.1 (AT4G03360.1 Ubiquitin family protein)

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-18
Identity = 91/285 (31.93%), Postives = 136/285 (47.72%), Query Frame = 1

Query: 3   VLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEIL 62
           V+   + G +F I+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+I 
Sbjct: 4   VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 63

Query: 63  QHSRIQLLVASESQNNSQSQPQSQPQIDPNHSIGRLKQRIHDI--NSVGPINGIMLQSNA 122
            +SRI L ++ +        PQ+      N S       IH+   N   P++    +S+A
Sbjct: 64  HNSRILLSISPDDNPTQNQVPQT------NQSPSTPSNPIHEFVNNQDSPLSP---KSSA 123

Query: 123 STTEL-----QDQRSLR-------DSEMSENS-EVEVCLRPSPTVSTAAPGMTTPPPPPQ 182
            T E      QD+  L        D+  S  S  ++  L P  + + A   +       +
Sbjct: 124 LTMEKFSKNQQDRPPLMRVVAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRNRDQEVK 183

Query: 183 ---PSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQR 242
               S + +    +  + S   K+ VMVQP      I +EV   DNV EL+KEL K+Q+R
Sbjct: 184 NRVSSPSDSVEEVINITDSLAMKMIVMVQPYGYTRMIQVEVTADDNVEELRKELVKMQER 243

Query: 243 LHFHLPPEGFFFIYDRD--VMDEDRSFRWHGVAQGDTIEIFNGSV 268
              +LP   ++ I+     V+ ED+SF  +GVA GDTI+I  G V
Sbjct: 244 GELNLPQGMYYLIHKHKQAVLHEDQSFLTNGVAYGDTIQISQGYV 279

BLAST of Cp4.1LG10g09620 vs. NCBI nr
Match: gi|567913557|ref|XP_006449092.1| (hypothetical protein CICLE_v10018056mg [Citrus clementina])

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72
Identity = 157/295 (53.22%), Postives = 204/295 (69.15%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQ---NNSQSQPQSQPQI---------------------DPNHSIG 120
           ILQ+SRIQLLVAS+++      QS P  +  +                     D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA 180
           RLK++IH++ S+ P+N +++QS+ +  ELQD RSLRD E+ +N+E++V +RPSPT +   
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQSSGA--ELQDHRSLRDCELMDNAEIDVHVRPSPTAT--- 180

Query: 181 PGMTTPPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKK 240
                       STT+        SG    KLK++V  + GN +IP+EVN +DNV EL+K
Sbjct: 181 ------------STTS--------SGMGSRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 240

Query: 241 ELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
           ELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

BLAST of Cp4.1LG10g09620 vs. NCBI nr
Match: gi|568827267|ref|XP_006467986.1| (PREDICTED: polyubiquitin 9 [Citrus sinensis])

HSP 1 Score: 281.2 bits (718), Expect = 1.9e-72
Identity = 157/295 (53.22%), Postives = 204/295 (69.15%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQ---NNSQSQPQSQPQI---------------------DPNHSIG 120
           ILQ+SRIQLLVAS+++      QS P  +  +                     D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAA 180
           RLK++IH++ S+ P+N +++QS+ +  ELQD RSLRD E+ +N+E++V +RPSPT +   
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQSSGA--ELQDHRSLRDCELMDNAEIDVHVRPSPTAT--- 180

Query: 181 PGMTTPPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKK 240
                       STT+        SG    KLK++V  + GN +IP+EVN +DNV EL+K
Sbjct: 181 ------------STTS--------SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVSELRK 240

Query: 241 ELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
           ELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 ELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

BLAST of Cp4.1LG10g09620 vs. NCBI nr
Match: gi|802779511|ref|XP_012091408.1| (PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Jatropha curcas])

HSP 1 Score: 278.9 bits (712), Expect = 9.6e-72
Identity = 158/290 (54.48%), Postives = 196/290 (67.59%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F  ++G  F+IEVGFFDTVLEIKEKIQKY  IP+ KQTLIFNG VLQDDRDVE CE
Sbjct: 1   MDVFFETQRGRPFSIEVGFFDTVLEIKEKIQKYQGIPVNKQTLIFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQPQSQP-------------------QIDPNHSIGRLKQR 120
           ILQ+S IQLL+A ++        +S P                   ++D N ++ RLK++
Sbjct: 61  ILQNSHIQLLIAPDNDKPQIKVEESSPSKKIQLSIKIPSSKLHVPLEMDLNDTVLRLKEK 120

Query: 121 IHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTT 180
           I ++ SV PI+ ++LQSN    ELQD RSL + E+ ENSE+ V +RPSPT S        
Sbjct: 121 IQEMESV-PIHRLILQSNGG--ELQDNRSLHECELMENSEINVNIRPSPTCSG------- 180

Query: 181 PPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKL 240
                     T + G  AT+  +KNKLK+MV  K G  KIP+E+N +DNVGEL+KELQKL
Sbjct: 181 ----------TGSTGAAATTTGTKNKLKLMVLTKCGTKKIPVEMNASDNVGELRKELQKL 240

Query: 241 QQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
            Q+L FHLP EG+FFIY ++VMDED+SFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 HQKLQFHLPQEGYFFIYKQNVMDEDQSFRWHHVCQGDTIEIFNGSVTGGS 270

BLAST of Cp4.1LG10g09620 vs. NCBI nr
Match: gi|645236530|ref|XP_008224781.1| (PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Prunus mume])

HSP 1 Score: 273.5 bits (698), Expect = 4.0e-70
Identity = 153/297 (51.52%), Postives = 198/297 (66.67%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+  P++G +F IEVG+FDTVLEIKEK+QKY  I +P QTL+FNG VL+DD+DV +CE
Sbjct: 1   MDVILEPQRGRSFTIEVGYFDTVLEIKEKVQKYQGISVPHQTLVFNGQVLEDDKDVAYCE 60

Query: 61  ILQHSRIQLLVASESQ-------NNSQSQPQSQP-------------------QIDPNHS 120
           IL +S +QL+VASES+       NN+     S P                   ++D N +
Sbjct: 61  ILNNSHVQLIVASESEKPTTTNNNNNVKVEDSSPSNKIQLNVKIPTSKMHVPVEMDINDT 120

Query: 121 IGRLKQRIHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPTVST 180
           + +LK++I  ++   P+  ++L S  +  ELQD RSLRD E+S+N+E+EV LRPSPT   
Sbjct: 121 VTKLKEKIQAMDQAVPVGRLVLHSLGN--ELQDHRSLRDYELSDNAEIEVSLRPSPTAVA 180

Query: 181 AAPGMTTPPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGEL 240
           A          P     T  AG       S+NKLK+MV PK G  KIP+E+NP+DNVGEL
Sbjct: 181 AVAS-------PVAMGGTGGAGVAV----SRNKLKLMVLPKCGTKKIPVEMNPSDNVGEL 240

Query: 241 KKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
           +KELQKL QRLHFHLP E +FFIY ++VM++DRSFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 RKELQKLHQRLHFHLPQESYFFIYKQNVMEDDRSFRWHQVGQGDTIEIFNGSVTGGS 284

BLAST of Cp4.1LG10g09620 vs. NCBI nr
Match: gi|255554995|ref|XP_002518535.1| (PREDICTED: uncharacterized protein LOC8267377 [Ricinus communis])

HSP 1 Score: 270.0 bits (689), Expect = 4.5e-69
Identity = 159/294 (54.08%), Postives = 198/294 (67.35%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F   KG  F+IE+G+FDTVLEIKEKIQKY  IPI KQTL+FNG VLQD+RD+E+CE
Sbjct: 1   MDVFFETPKGRQFSIELGYFDTVLEIKEKIQKYQDIPINKQTLVFNGQVLQDERDIEYCE 60

Query: 61  ILQHSRIQLLVASESQNNS------QSQPQSQP----------------QIDPNHSIGRL 120
           IL +S IQLL+A ++          +S P S+                 ++D N +I RL
Sbjct: 61  ILHNSHIQLLIAPDNDETKPQIKTEESSPPSKKIQLSIKIPSSKLHVPIEMDVNDTILRL 120

Query: 121 KQRIHDINSVGPINGIMLQSNASTTELQDQRSLRDSEMSENSEVEVCLRPSPT-VSTAAP 180
           K++IH+I SV P++ ++LQS  S  EL D RSLR+SE+ +NSE+ V +RPSPT + T + 
Sbjct: 121 KEKIHEIESV-PVSRLVLQS--SNGELLDNRSLRESELLDNSEISVNIRPSPTGLGTGSG 180

Query: 181 GMTTPPPPPQPSTTTAAAGTVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKE 240
           G T              AGT         KLK+MV  K G  KIP+EVN +DNVGEL+KE
Sbjct: 181 GPT--------------AGT--------KKLKLMVLTKCGTQKIPVEVNASDNVGELRKE 240

Query: 241 LQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAQGDTIEIFNGSVSGGS 272
           LQKL QRLHFHLP EG+FFIY ++VMD+DRSFRWH V QGDTIEIFNGSV+GGS
Sbjct: 241 LQKLHQRLHFHLPQEGYFFIYKQNVMDDDRSFRWHHVCQGDTIEIFNGSVTGGS 269

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
V4U8Q0_9ROSI1.0e-7253.22Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018056mg PE=4 SV=1[more]
A0A067G7E3_CITSI1.3e-7253.22Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044874mg PE=4 SV=1[more]
B9RXR6_RICCO3.1e-6954.08Ubiquitin, putative OS=Ricinus communis GN=RCOM_0905760 PE=4 SV=1[more]
A0A061GGR6_THECC9.1e-6953.95Ubiquitin, putative OS=Theobroma cacao GN=TCM_030159 PE=4 SV=1[more]
A0A0D2VGU1_GOSRA3.4e-6854.17Uncharacterized protein OS=Gossypium raimondii GN=B456_011G016700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G05230.13.8e-2643.01 Ubiquitin-like superfamily protein[more]
AT4G05260.12.4e-2031.60 Ubiquitin-like superfamily protein[more]
AT4G03370.16.9e-2029.55 Ubiquitin family protein[more]
AT4G02950.11.0e-1832.06 Ubiquitin family protein[more]
AT4G03360.12.9e-1831.93 Ubiquitin family protein[more]
Match NameE-valueIdentityDescription
gi|567913557|ref|XP_006449092.1|1.5e-7253.22hypothetical protein CICLE_v10018056mg [Citrus clementina][more]
gi|568827267|ref|XP_006467986.1|1.9e-7253.22PREDICTED: polyubiquitin 9 [Citrus sinensis][more]
gi|802779511|ref|XP_012091408.1|9.6e-7254.48PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Jatropha curcas][more]
gi|645236530|ref|XP_008224781.1|4.0e-7051.52PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Prunus mume][more]
gi|255554995|ref|XP_002518535.1|4.5e-6954.08PREDICTED: uncharacterized protein LOC8267377 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR019954Ubiquitin_CS
IPR000626Ubiquitin_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g09620.1Cp4.1LG10g09620.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 5..71
score: 3.7E-14coord: 196..261
score: 2.
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 73..147
score: 4.8coord: 1..72
score: 1.4E-9coord: 190..265
score:
IPR000626Ubiquitin domainPROFILEPS50053UBIQUITIN_2coord: 188..269
score: 9.831coord: 1..71
score: 14
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
scor
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 179..261
score: 5.4E-12coord: 1..71
score: 2.9E-16coord: 88..147
score: 4.
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..149
score: 1.3E-53coord: 187..264
score: 1.3
NoneNo IPR availablePANTHERPTHR10666:SF159SUBFAMILY NOT NAMEDcoord: 1..149
score: 1.3E-53coord: 187..264
score: 1.3

The following gene(s) are paralogous to this gene:

None