CmoCh03G005450 (gene) Cucurbita moschata (Rifu)

NameCmoCh03G005450
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUbiquitin, putative
LocationCmo_Chr03 : 5477315 .. 5478130 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGTTGTTCGTACCTGAGAAAGGAGAGGCGTTCGCCATTGAAGTTGGTTTCTTCGATACCGTTTTGGAAATCAAAGAGAAGATTCAAAAATATCACCATATCCCCATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTAGCTTCCGAATCTCAAAACAATTCTCAATCCCAACCCCAAATCGACCCAAACCATTCAATCGGGCGCCTCAAACAGAGGATCCACGACATCAACTCTGTGGGCCCCATCAACGGGATCATGCTCCAATCCAACGCCGCCTCCCCTACCGAGTTACAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTCCGAGGTTGAGGTTTGTTTGCGGCCGTCGCCTACGGTTTCGACTGCTGCGCCTGGCATGACAACGCCACCGCCGCCACAGCCGTCGACGACAACAACGACGACAACAGTGGCAGCTGCGACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAACCCAACCGATAACGTGGGAGAATTAAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTACATTTTCATCTTCCACCCGAAGGTTTCTTTTTCATTTATGACCGCGACGTTATGGATGAAGACCGGTCCTTCCGTTGGCATGGTGTGGCCCACGGCGATACAATTGAGATCTTCAATGGCAGCGTTTCTGGCGGATCTTAA

mRNA sequence

ATGGATGTGTTGTTCGTACCTGAGAAAGGAGAGGCGTTCGCCATTGAAGTTGGTTTCTTCGATACCGTTTTGGAAATCAAAGAGAAGATTCAAAAATATCACCATATCCCCATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTAGCTTCCGAATCTCAAAACAATTCTCAATCCCAACCCCAAATCGACCCAAACCATTCAATCGGGCGCCTCAAACAGAGGATCCACGACATCAACTCTGTGGGCCCCATCAACGGGATCATGCTCCAATCCAACGCCGCCTCCCCTACCGAGTTACAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTCCGAGGTTGAGGTTTGTTTGCGGCCGTCGCCTACGGTTTCGACTGCTGCGCCTGGCATGACAACGCCACCGCCGCCACAGCCGTCGACGACAACAACGACGACAACAGTGGCAGCTGCGACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAACCCAACCGATAACGTGGGAGAATTAAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTACATTTTCATCTTCCACCCGAAGGTTTCTTTTTCATTTATGACCGCGACGTTATGGATGAAGACCGGTCCTTCCGTTGGCATGGTGTGGCCCACGGCGATACAATTGAGATCTTCAATGGCAGCGTTTCTGGCGGATCTTAA

Coding sequence (CDS)

ATGGATGTGTTGTTCGTACCTGAGAAAGGAGAGGCGTTCGCCATTGAAGTTGGTTTCTTCGATACCGTTTTGGAAATCAAAGAGAAGATTCAAAAATATCACCATATCCCCATCCCCAAACAAACCCTAATCTTCAATGGCCACGTCCTCCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAGCATTCTCGCATTCAACTCCTCGTAGCTTCCGAATCTCAAAACAATTCTCAATCCCAACCCCAAATCGACCCAAACCATTCAATCGGGCGCCTCAAACAGAGGATCCACGACATCAACTCTGTGGGCCCCATCAACGGGATCATGCTCCAATCCAACGCCGCCTCCCCTACCGAGTTACAGGATCAACGTTCCTTGCGTGACAGCGAGATGTCGGAGAATTCCGAGGTTGAGGTTTGTTTGCGGCCGTCGCCTACGGTTTCGACTGCTGCGCCTGGCATGACAACGCCACCGCCGCCACAGCCGTCGACGACAACAACGACGACAACAGTGGCAGCTGCGACGGTGGCAACGAGTGGGTCGTCGAAGAACAAGTTGAAAGTAATGGTGCAACCGAAATTTGGGAACTCAAAGATACCAATGGAAGTGAACCCAACCGATAACGTGGGAGAATTAAAGAAAGAGCTGCAAAAGCTACAGCAGAGACTACATTTTCATCTTCCACCCGAAGGTTTCTTTTTCATTTATGACCGCGACGTTATGGATGAAGACCGGTCCTTCCGTTGGCATGGTGTGGCCCACGGCGATACAATTGAGATCTTCAATGGCAGCGTTTCTGGCGGATCTTAA
BLAST of CmoCh03G005450 vs. TrEMBL
Match: V4U8Q0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018056mg PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.9e-72
Identity = 157/299 (52.51%), Postives = 203/299 (67.89%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQ---NNSQSQPQ-------------------------IDPNHSIG 120
           ILQ+SRIQLLVAS+++      QS P                          +D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNAASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTA 180
           RLK++IH++ S+ P+N +++QS+ A   ELQD RSLRD E+ +N+E++V +RPSPT    
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQSSGA---ELQDHRSLRDCELMDNAEIDVHVRPSPT---- 180

Query: 181 APGMTTPPPPQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVG 240
                       +T+TT+          SG    KLK++V  + GN +IP+EVN +DNV 
Sbjct: 181 ------------ATSTTS----------SGMGSRKLKLLVLTQCGNKRIPVEVNASDNVS 240

Query: 241 ELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           EL+KELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 ELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

BLAST of CmoCh03G005450 vs. TrEMBL
Match: A0A067G7E3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044874mg PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.1e-72
Identity = 157/299 (52.51%), Postives = 203/299 (67.89%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQ---NNSQSQPQ-------------------------IDPNHSIG 120
           ILQ+SRIQLLVAS+++      QS P                          +D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNAASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTA 180
           RLK++IH++ S+ P+N +++QS+ A   ELQD RSLRD E+ +N+E++V +RPSPT    
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQSSGA---ELQDHRSLRDCELMDNAEIDVHVRPSPT---- 180

Query: 181 APGMTTPPPPQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVG 240
                       +T+TT+          SG    KLK++V  + GN +IP+EVN +DNV 
Sbjct: 181 ------------ATSTTS----------SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVS 240

Query: 241 ELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           EL+KELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 ELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

BLAST of CmoCh03G005450 vs. TrEMBL
Match: A0A061GGR6_THECC (Ubiquitin, putative OS=Theobroma cacao GN=TCM_030159 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.5e-68
Identity = 154/296 (52.03%), Postives = 196/296 (66.22%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F  ++G +F+IEVGFFDTVLEIKEK+QKY  IPI +QTL+FNG VLQD+RDVE+CE
Sbjct: 1   MDVTFECQRGRSFSIEVGFFDTVLEIKEKVQKYQGIPISRQTLVFNGQVLQDERDVEYCE 60

Query: 61  ILQHSRIQLLVASESQN-----NSQSQP-------------------QIDPNHSIGRLKQ 120
           ILQ+S IQLLVA E+         +S P                   ++D N ++ RLK+
Sbjct: 61  ILQNSSIQLLVAPEADKPQVVKTEKSSPSKKLQLKINIPSSKASIPLEMDVNDTVLRLKE 120

Query: 121 RIHDINSVGPINGIMLQSNAASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVS-TAAPG 180
           +I ++  V P+N +++QS+ A   ELQD  SLRD E+ +N+E++V ++PSPT S T + G
Sbjct: 121 KIREMEPV-PVNRLVVQSSGA---ELQDHLSLRDCELPDNTEIDVNIKPSPTGSGTGSAG 180

Query: 181 MTTPPPPQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELK 240
            TT                         +K  LKVMV PK G  KIP+EVN +DNV EL+
Sbjct: 181 ATT------------------------GTKRLLKVMVLPKCGTKKIPVEVNASDNVAELR 240

Query: 241 KELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           KELQKLQQRL FHLP EG+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 KELQKLQQRLQFHLPQEGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 268

BLAST of CmoCh03G005450 vs. TrEMBL
Match: B9RXR6_RICCO (Ubiquitin, putative OS=Ricinus communis GN=RCOM_0905760 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.9e-68
Identity = 156/301 (51.83%), Postives = 194/301 (64.45%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F   KG  F+IE+G+FDTVLEIKEKIQKY  IPI KQTL+FNG VLQD+RD+E+CE
Sbjct: 1   MDVFFETPKGRQFSIELGYFDTVLEIKEKIQKYQDIPINKQTLVFNGQVLQDERDIEYCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQPQI-----------------------------DPNHSI 120
           IL +S IQLL+A +   N +++PQI                             D N +I
Sbjct: 61  ILHNSHIQLLIAPD---NDETKPQIKTEESSPPSKKIQLSIKIPSSKLHVPIEMDVNDTI 120

Query: 121 GRLKQRIHDINSVGPINGIMLQSNAASPTELQDQRSLRDSEMSENSEVEVCLRPSPT-VS 180
            RLK++IH+I SV P++ ++LQS   S  EL D RSLR+SE+ +NSE+ V +RPSPT + 
Sbjct: 121 LRLKEKIHEIESV-PVSRLVLQS---SNGELLDNRSLRESELLDNSEISVNIRPSPTGLG 180

Query: 181 TAAPGMTTPPPPQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDN 240
           T + G T                         +   KLK+MV  K G  KIP+EVN +DN
Sbjct: 181 TGSGGPT-------------------------AGTKKLKLMVLTKCGTQKIPVEVNASDN 240

Query: 241 VGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGG 272
           VGEL+KELQKL QRLHFHLP EG+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GG
Sbjct: 241 VGELRKELQKLHQRLHFHLPQEGYFFIYKQNVMDDDRSFRWHHVCQGDTIEIFNGSVTGG 269

BLAST of CmoCh03G005450 vs. TrEMBL
Match: A0A0D2VGU1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G016700 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.9e-67
Identity = 155/290 (53.45%), Postives = 195/290 (67.24%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F  +KG+ F+IEVGFFDTVLEIKEKI KYH IPIP QTLIFNGHVLQDDRDVE+CE
Sbjct: 1   MDVIFETQKGKPFSIEVGFFDTVLEIKEKIHKYHGIPIPHQTLIFNGHVLQDDRDVEYCE 60

Query: 61  ILQHSRIQLLVASESQ-NNSQSQPQID---PNHSIGRLKQRIHDINSVGPINGIMLQSNA 120
           ILQ+SRIQLLV+S+S  +NS  QPQ +    +H +    ++I  +NS  P +  ++ S  
Sbjct: 61  ILQNSRIQLLVSSDSDTSNSTKQPQPNAAAADHQLPSPAKKI-QLNSNTPSSNTVVPSET 120

Query: 121 ---ASPTELQ------------DQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTPPP 180
               +P  L+            D  S R+ E++ENS+V+V ++PSPT S           
Sbjct: 121 DVNYNPLRLKEKIHGQMDPVPVDSLSSRECELAENSDVDVNIKPSPTGS----------- 180

Query: 181 PQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKL 240
                     T +A T A + ++  KLK++V PK G  KIP+EVN TDNV EL+KELQKL
Sbjct: 181 ---------GTGSAGTTAGTPTAAKKLKLLVLPKCGTKKIPVEVNATDNVSELRKELQKL 240

Query: 241 QQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
            QRLHF LP EG+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 HQRLHFQLPQEGYFFIYKQNVMDDDRSFRWHQVGQGDTIEIFNGSVTGGS 269

BLAST of CmoCh03G005450 vs. TAIR10
Match: AT4G05230.1 (AT4G05230.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 82/207 (39.61%), Postives = 118/207 (57.00%), Query Frame = 1

Query: 74  ESQNNSQSQPQIDPNHSIGRLKQRIHDINSVGPING--IMLQSNAASPTELQDQRSLRDS 133
           E+++ S  + ++    ++  +KQ+I     + P++   ++ Q N      LQD   +   
Sbjct: 6   ETRSGSTFEIELGYWDTVLEIKQKIEKYQRI-PVSKQTLLFQGNV-----LQDHLDIEQC 65

Query: 134 EMSENSEVEVCLR-PSPTVSTAAPGMTTPPPPQPSTTTTTTTVAAATVATSGSSKN---- 193
            +  +S +++ +  P  + +      T   P   ST  T+     +TV    S+ N    
Sbjct: 66  VILNHSRIQLSISSPDQSRNNIQVFKTEQFPQSNSTEQTSNGHHESTVMIPMSNNNNNNN 125

Query: 194 --KLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMD 253
             KL+VMV PK G  KIP++VN  DNVGEL+KEL K+QQR    LP EG+FFIY ++VMD
Sbjct: 126 PKKLRVMVLPKSGTRKIPVDVNAGDNVGELRKELAKIQQRFQLSLPQEGYFFIYKQNVMD 185

Query: 254 EDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           E+RSFRWH V  GDTIEIFNGSVSGGS
Sbjct: 186 ENRSFRWHRVDQGDTIEIFNGSVSGGS 206

BLAST of CmoCh03G005450 vs. TAIR10
Match: AT4G03370.1 (AT4G03370.1 Ubiquitin family protein)

HSP 1 Score: 104.8 bits (260), Expect = 8.8e-23
Identity = 88/283 (31.10%), Postives = 132/283 (46.64%), Query Frame = 1

Query: 8   EKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEILQHSRI 67
           E G  F+I++G  DTVL  K KI+    IP+ +QT+ F G +L+D  D+   +ILQ+  +
Sbjct: 8   ESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLL 67

Query: 68  QLLVASESQNNSQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNAASPTELQDQRS 127
            L + S   N +Q+Q    P++ I    + + + +S       +L      P        
Sbjct: 68  HLSI-SPDDNPTQNQVPQSPSNPI---HEFVKNQDSAEDKKNPVLLHQTGKPPLPPKSSP 127

Query: 128 LRDSEMSENSEVEVCLRPSPTVSTAAPGMTTPPPPQP-------------------STTT 187
           L     S+N          P ++   P +  P    P                   S+ +
Sbjct: 128 LTTENFSKNQ------HDRPVITKMVPELLGPQGTSPVTVGRRRNRDQEVQNRVSSSSDS 187

Query: 188 TTTTVAAATVATSGSSKN---KLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRL 247
               +          +KN   K+ VMVQP     +I +EVN   NV  L+KEL K+Q+R 
Sbjct: 188 VKEVINIPDTPARKKTKNYPLKITVMVQPFEETRRIQVEVNVLSNVEVLRKELVKMQERG 247

Query: 248 HFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVS 269
             +LP EGFFFI+ +DV+ ED+SF  + VA GDTIEIF G V+
Sbjct: 248 ELNLPHEGFFFIHKQDVLREDQSFMANRVAPGDTIEIFQGYVT 280

BLAST of CmoCh03G005450 vs. TAIR10
Match: AT4G05260.1 (AT4G05260.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20
Identity = 86/268 (32.09%), Postives = 129/268 (48.13%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F  + G  F IE+G++DTVLEIK+KI+KY  IP+P QTL F G+ L+D  D+  C+
Sbjct: 1   MDVYFETQNGRKFCIELGYWDTVLEIKKKIEKYQRIPVPNQTLFF-GNALEDHLDIGQCK 60

Query: 61  ILQHSRIQLLVASESQNNSQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNAASPT 120
           ILQ+S + L V  +  +N+    Q +    I      I D+     I G  L        
Sbjct: 61  ILQNSHVVLFVLPDPNDNNDQVLQTEEQPPI------IGDL-----IYGEDLPLTTEVVL 120

Query: 121 ELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTPPPPQPSTTTTTTTVAAAT-VA 180
            ++    ++DS +  N +      PS        G    P      T  + +V   T + 
Sbjct: 121 NIRPFCPVQDSPVRNNDQSP----PSDAAKDIIKGHQDSPVRNNEQTPPSDSVKENTNIQ 180

Query: 181 TSGSSKNKLKVMVQPKFGNSKIPMEVN----PTDNVGELKKELQKLQQRLHFHLPPEG-F 240
            S   K  L + V P  G  K    ++     T  V  L++EL + + R H   P +G +
Sbjct: 181 DSPVGKIILTLRVMPYSGKIKAAKNLHFITYKTYRVKMLRQELVQNELRDHLDRPQDGDY 240

Query: 241 FFIYDRDVMDEDRSFRWHGVAHGDTIEI 263
           FF++   V++ED+SF W+ VAH D +EI
Sbjct: 241 FFVHKGRVLNEDQSFEWNSVAHTDIVEI 252

BLAST of CmoCh03G005450 vs. TAIR10
Match: AT4G02950.1 (AT4G02950.1 Ubiquitin family protein)

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-19
Identity = 86/283 (30.39%), Postives = 135/283 (47.70%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           + V+   + G +F I+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+
Sbjct: 36  ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95

Query: 61  ILQHSRIQLLVASESQNNSQSQPQIDPNHSIGRLKQRIHDI--NSVGPINGIMLQSNAAS 120
           I  +SRI L ++ +        PQ   N S       IH+   N   P++    QS+A +
Sbjct: 96  IRHNSRILLSISPDDNPTQNQVPQT--NQSPSTPSNPIHEFVNNQDSPLSP---QSSALT 155

Query: 121 PTELQDQRSLR-----------DSEMSENS-EVEVCLRPSPTVSTAAPGMTTPPPPQPST 180
             +    +  R           D+  S  S  ++  L P  + + A   +        + 
Sbjct: 156 MEKFSKNQQDRPPLMRVVAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRNRDQEVKNR 215

Query: 181 TTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLH 240
            ++ +      +  + S   K+ VM+QP      I +EV   DNV EL+KEL K+Q+R  
Sbjct: 216 ESSPSDSVEEVINFTDSPAMKMIVMLQPYGYTRMIQVEVTADDNVEELRKELVKMQERGE 275

Query: 241 FHLPPEGFFFIYDRD--VMDEDRSFRWHGVAHGDTIEIFNGSV 268
            +LP   ++ I+     V+ ED+SF  +GVA+GDTI+I  G V
Sbjct: 276 LNLPQGMYYLIHKHKQAVLHEDQSFLTNGVAYGDTIQISQGYV 313

BLAST of CmoCh03G005450 vs. TAIR10
Match: AT4G03360.1 (AT4G03360.1 Ubiquitin family protein)

HSP 1 Score: 92.0 bits (227), Expect = 5.9e-19
Identity = 86/281 (30.60%), Postives = 134/281 (47.69%), Query Frame = 1

Query: 3   VLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCEIL 62
           V+   + G +F I+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+I 
Sbjct: 4   VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 63

Query: 63  QHSRIQLLVASESQNNSQSQPQIDPNHSIGRLKQRIHDI--NSVGPINGIMLQSNAASPT 122
            +SRI L ++ +        PQ   N S       IH+   N   P++    +S+A +  
Sbjct: 64  HNSRILLSISPDDNPTQNQVPQT--NQSPSTPSNPIHEFVNNQDSPLSP---KSSALTME 123

Query: 123 ELQDQRSLR-----------DSEMSENS-EVEVCLRPSPTVSTAAPGMTTPPPPQPSTTT 182
           +    +  R           D+  S  S  ++  L P  + + A   +        +  +
Sbjct: 124 KFSKNQQDRPPLMRVVAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRNRDQEVKNRVS 183

Query: 183 TTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKELQKLQQRLHFH 242
           + +      +  + S   K+ VMVQP      I +EV   DNV EL+KEL K+Q+R   +
Sbjct: 184 SPSDSVEEVINITDSLAMKMIVMVQPYGYTRMIQVEVTADDNVEELRKELVKMQERGELN 243

Query: 243 LPPEGFFFIYDRD--VMDEDRSFRWHGVAHGDTIEIFNGSV 268
           LP   ++ I+     V+ ED+SF  +GVA+GDTI+I  G V
Sbjct: 244 LPQGMYYLIHKHKQAVLHEDQSFLTNGVAYGDTIQISQGYV 279

BLAST of CmoCh03G005450 vs. NCBI nr
Match: gi|567913557|ref|XP_006449092.1| (hypothetical protein CICLE_v10018056mg [Citrus clementina])

HSP 1 Score: 279.6 bits (714), Expect = 5.6e-72
Identity = 157/299 (52.51%), Postives = 203/299 (67.89%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQ---NNSQSQPQ-------------------------IDPNHSIG 120
           ILQ+SRIQLLVAS+++      QS P                          +D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNAASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTA 180
           RLK++IH++ S+ P+N +++QS+ A   ELQD RSLRD E+ +N+E++V +RPSPT    
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQSSGA---ELQDHRSLRDCELMDNAEIDVHVRPSPT---- 180

Query: 181 APGMTTPPPPQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVG 240
                       +T+TT+          SG    KLK++V  + GN +IP+EVN +DNV 
Sbjct: 181 ------------ATSTTS----------SGMGSRKLKLLVLTQCGNKRIPVEVNASDNVS 240

Query: 241 ELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           EL+KELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 ELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

BLAST of CmoCh03G005450 vs. NCBI nr
Match: gi|568827267|ref|XP_006467986.1| (PREDICTED: polyubiquitin 9 [Citrus sinensis])

HSP 1 Score: 279.3 bits (713), Expect = 7.4e-72
Identity = 157/299 (52.51%), Postives = 203/299 (67.89%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV+F P++G+AF IEVGFFDTVLEIKEKI+KY  IP+PKQTL+FNG VLQDDRDVE CE
Sbjct: 1   MDVIFEPQRGKAFTIEVGFFDTVLEIKEKIEKYQGIPVPKQTLVFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQ---NNSQSQPQ-------------------------IDPNHSIG 120
           ILQ+SRIQLLVAS+++      QS P                          +D N ++ 
Sbjct: 61  ILQNSRIQLLVASDNKPQVKTEQSSPSKKIHLKINIPSNSKTHHHHHHLPLDMDVNDTVL 120

Query: 121 RLKQRIHDINSVGPINGIMLQSNAASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTA 180
           RLK++IH++ S+ P+N +++QS+ A   ELQD RSLRD E+ +N+E++V +RPSPT    
Sbjct: 121 RLKEKIHEMESI-PVNRLLVQSSGA---ELQDHRSLRDCELMDNAEIDVHVRPSPT---- 180

Query: 181 APGMTTPPPPQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVG 240
                       +T+TT+          SG    KLK++V  + GN +IP+EVN +DNV 
Sbjct: 181 ------------ATSTTS----------SGMGPRKLKLLVLTQCGNKRIPVEVNASDNVS 240

Query: 241 ELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           EL+KELQKL QR HFHLP +G+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 ELRKELQKLHQRYHFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 269

BLAST of CmoCh03G005450 vs. NCBI nr
Match: gi|802779511|ref|XP_012091408.1| (PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Jatropha curcas])

HSP 1 Score: 269.6 bits (688), Expect = 5.8e-69
Identity = 161/294 (54.76%), Postives = 199/294 (67.69%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F  ++G  F+IEVGFFDTVLEIKEKIQKY  IP+ KQTLIFNG VLQDDRDVE CE
Sbjct: 1   MDVFFETQRGRPFSIEVGFFDTVLEIKEKIQKYQGIPVNKQTLIFNGQVLQDDRDVEHCE 60

Query: 61  ILQHSRIQLLVASESQNN----SQSQP-------------------QIDPNHSIGRLKQR 120
           ILQ+S IQLL+A ++        +S P                   ++D N ++ RLK++
Sbjct: 61  ILQNSHIQLLIAPDNDKPQIKVEESSPSKKIQLSIKIPSSKLHVPLEMDLNDTVLRLKEK 120

Query: 121 IHDINSVGPINGIMLQSNAASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMT 180
           I ++ SV PI+ ++LQSN     ELQD RSL + E+ ENSE+ V +RPSPT S       
Sbjct: 121 IQEMESV-PIHRLILQSNGG---ELQDNRSLHECELMENSEINVNIRPSPTCS------- 180

Query: 181 TPPPPQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELKKE 240
                      T +T AAAT  T+G +KNKLK+MV  K G  KIP+E+N +DNVGEL+KE
Sbjct: 181 ----------GTGSTGAAAT--TTG-TKNKLKLMVLTKCGTKKIPVEMNASDNVGELRKE 240

Query: 241 LQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           LQKL Q+L FHLP EG+FFIY ++VMDED+SFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 LQKLHQKLQFHLPQEGYFFIYKQNVMDEDQSFRWHHVCQGDTIEIFNGSVTGGS 270

BLAST of CmoCh03G005450 vs. NCBI nr
Match: gi|590625807|ref|XP_007025986.1| (Ubiquitin, putative [Theobroma cacao])

HSP 1 Score: 266.2 bits (679), Expect = 6.4e-68
Identity = 154/296 (52.03%), Postives = 196/296 (66.22%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F  ++G +F+IEVGFFDTVLEIKEK+QKY  IPI +QTL+FNG VLQD+RDVE+CE
Sbjct: 1   MDVTFECQRGRSFSIEVGFFDTVLEIKEKVQKYQGIPISRQTLVFNGQVLQDERDVEYCE 60

Query: 61  ILQHSRIQLLVASESQN-----NSQSQP-------------------QIDPNHSIGRLKQ 120
           ILQ+S IQLLVA E+         +S P                   ++D N ++ RLK+
Sbjct: 61  ILQNSSIQLLVAPEADKPQVVKTEKSSPSKKLQLKINIPSSKASIPLEMDVNDTVLRLKE 120

Query: 121 RIHDINSVGPINGIMLQSNAASPTELQDQRSLRDSEMSENSEVEVCLRPSPTVS-TAAPG 180
           +I ++  V P+N +++QS+ A   ELQD  SLRD E+ +N+E++V ++PSPT S T + G
Sbjct: 121 KIREMEPV-PVNRLVVQSSGA---ELQDHLSLRDCELPDNTEIDVNIKPSPTGSGTGSAG 180

Query: 181 MTTPPPPQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDNVGELK 240
            TT                         +K  LKVMV PK G  KIP+EVN +DNV EL+
Sbjct: 181 ATT------------------------GTKRLLKVMVLPKCGTKKIPVEVNASDNVAELR 240

Query: 241 KELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGGS 272
           KELQKLQQRL FHLP EG+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GGS
Sbjct: 241 KELQKLQQRLQFHLPQEGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS 268

BLAST of CmoCh03G005450 vs. NCBI nr
Match: gi|255554995|ref|XP_002518535.1| (PREDICTED: uncharacterized protein LOC8267377 [Ricinus communis])

HSP 1 Score: 265.8 bits (678), Expect = 8.4e-68
Identity = 156/301 (51.83%), Postives = 194/301 (64.45%), Query Frame = 1

Query: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60
           MDV F   KG  F+IE+G+FDTVLEIKEKIQKY  IPI KQTL+FNG VLQD+RD+E+CE
Sbjct: 1   MDVFFETPKGRQFSIELGYFDTVLEIKEKIQKYQDIPINKQTLVFNGQVLQDERDIEYCE 60

Query: 61  ILQHSRIQLLVASESQNNSQSQPQI-----------------------------DPNHSI 120
           IL +S IQLL+A +   N +++PQI                             D N +I
Sbjct: 61  ILHNSHIQLLIAPD---NDETKPQIKTEESSPPSKKIQLSIKIPSSKLHVPIEMDVNDTI 120

Query: 121 GRLKQRIHDINSVGPINGIMLQSNAASPTELQDQRSLRDSEMSENSEVEVCLRPSPT-VS 180
            RLK++IH+I SV P++ ++LQS   S  EL D RSLR+SE+ +NSE+ V +RPSPT + 
Sbjct: 121 LRLKEKIHEIESV-PVSRLVLQS---SNGELLDNRSLRESELLDNSEISVNIRPSPTGLG 180

Query: 181 TAAPGMTTPPPPQPSTTTTTTTVAAATVATSGSSKNKLKVMVQPKFGNSKIPMEVNPTDN 240
           T + G T                         +   KLK+MV  K G  KIP+EVN +DN
Sbjct: 181 TGSGGPT-------------------------AGTKKLKLMVLTKCGTQKIPVEVNASDN 240

Query: 241 VGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVSGG 272
           VGEL+KELQKL QRLHFHLP EG+FFIY ++VMD+DRSFRWH V  GDTIEIFNGSV+GG
Sbjct: 241 VGELRKELQKLHQRLHFHLPQEGYFFIYKQNVMDDDRSFRWHHVCQGDTIEIFNGSVTGG 269

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
V4U8Q0_9ROSI3.9e-7252.51Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018056mg PE=4 SV=1[more]
A0A067G7E3_CITSI5.1e-7252.51Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044874mg PE=4 SV=1[more]
A0A061GGR6_THECC4.5e-6852.03Ubiquitin, putative OS=Theobroma cacao GN=TCM_030159 PE=4 SV=1[more]
B9RXR6_RICCO5.9e-6851.83Ubiquitin, putative OS=Ricinus communis GN=RCOM_0905760 PE=4 SV=1[more]
A0A0D2VGU1_GOSRA2.9e-6753.45Uncharacterized protein OS=Gossypium raimondii GN=B456_011G016700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G05230.11.4e-2539.61 Ubiquitin-like superfamily protein[more]
AT4G03370.18.8e-2331.10 Ubiquitin family protein[more]
AT4G05260.11.4e-2032.09 Ubiquitin-like superfamily protein[more]
AT4G02950.14.5e-1930.39 Ubiquitin family protein[more]
AT4G03360.15.9e-1930.60 Ubiquitin family protein[more]
Match NameE-valueIdentityDescription
gi|567913557|ref|XP_006449092.1|5.6e-7252.51hypothetical protein CICLE_v10018056mg [Citrus clementina][more]
gi|568827267|ref|XP_006467986.1|7.4e-7252.51PREDICTED: polyubiquitin 9 [Citrus sinensis][more]
gi|802779511|ref|XP_012091408.1|5.8e-6954.76PREDICTED: ubiquitin-like protein-NEDD8-like protein RUB3 [Jatropha curcas][more]
gi|590625807|ref|XP_007025986.1|6.4e-6852.03Ubiquitin, putative [Theobroma cacao][more]
gi|255554995|ref|XP_002518535.1|8.4e-6851.83PREDICTED: uncharacterized protein LOC8267377 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR019954Ubiquitin_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G005450.1CmoCh03G005450.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 5..71
score: 3.8E-14coord: 196..261
score: 4.
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 190..265
score: 5.2coord: 1..72
score: 1.4E-9coord: 74..144
score:
IPR000626Ubiquitin domainPROFILEPS50053UBIQUITIN_2coord: 1..71
score: 14.447coord: 67..144
score: 8.524coord: 188..269
score: 9
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
scor
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 179..261
score: 1.2E-11coord: 1..71
score: 2.9E-16coord: 84..144
score: 5.
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 187..264
score: 4.7E-53coord: 1..146
score: 4.7
NoneNo IPR availablePANTHERPTHR10666:SF159SUBFAMILY NOT NAMEDcoord: 1..146
score: 4.7E-53coord: 187..264
score: 4.7

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G005450Cucumber (Chinese Long) v3cmocucB0760
CmoCh03G005450Cucumber (Chinese Long) v3cmocucB0797
CmoCh03G005450Watermelon (97103) v2cmowmbB650
CmoCh03G005450Watermelon (97103) v2cmowmbB656
CmoCh03G005450Wax gourdcmowgoB0803
CmoCh03G005450Cucurbita moschata (Rifu)cmocmoB182
CmoCh03G005450Cucurbita moschata (Rifu)cmocmoB335
CmoCh03G005450Cucurbita moschata (Rifu)cmocmoB362
CmoCh03G005450Cucurbita moschata (Rifu)cmocmoB394
CmoCh03G005450Cucurbita moschata (Rifu)cmocmoB428
CmoCh03G005450Cucurbita moschata (Rifu)cmocmoB455
CmoCh03G005450Cucumber (Gy14) v1cgycmoB0159
CmoCh03G005450Cucurbita maxima (Rimu)cmacmoB235
CmoCh03G005450Cucurbita maxima (Rimu)cmacmoB418
CmoCh03G005450Cucurbita maxima (Rimu)cmacmoB529
CmoCh03G005450Cucurbita maxima (Rimu)cmacmoB858
CmoCh03G005450Wild cucumber (PI 183967)cmocpiB648
CmoCh03G005450Cucumber (Chinese Long) v2cmocuB637
CmoCh03G005450Melon (DHL92) v3.5.1cmomeB581
CmoCh03G005450Watermelon (Charleston Gray)cmowcgB583
CmoCh03G005450Watermelon (97103) v1cmowmB614
CmoCh03G005450Cucurbita pepo (Zucchini)cmocpeB602
CmoCh03G005450Cucurbita pepo (Zucchini)cmocpeB609
CmoCh03G005450Cucurbita pepo (Zucchini)cmocpeB631
CmoCh03G005450Cucurbita pepo (Zucchini)cmocpeB624
CmoCh03G005450Bottle gourd (USVL1VR-Ls)cmolsiB581
CmoCh03G005450Bottle gourd (USVL1VR-Ls)cmolsiB596
CmoCh03G005450Cucumber (Gy14) v2cgybcmoB947
CmoCh03G005450Cucumber (Gy14) v2cgybcmoB116
CmoCh03G005450Cucumber (Gy14) v2cgybcmoB231
CmoCh03G005450Melon (DHL92) v3.6.1cmomedB667
CmoCh03G005450Melon (DHL92) v3.6.1cmomedB670
CmoCh03G005450Silver-seed gourdcarcmoB0045
CmoCh03G005450Silver-seed gourdcarcmoB0886
CmoCh03G005450Silver-seed gourdcarcmoB1246
CmoCh03G005450Silver-seed gourdcarcmoB1353