Cp4.1LG10g09130 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g09130
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RING finger protein
Location	Cp4.1LG10 : 4772541 .. 4774178 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTGTTCCAGGTATGAAAAGTTACAAATACATCATAAGCTGAAATGTGTGAACGCTTGTGATTTCTCTCTGGTTTGTTGTTCTTGGAGATTCTTGAGGTTGCTGGTTTTTTCAAGTATGTCAGCTTAATGTTTACTGTTCCTGAGCTGTAGGGCATCGGAGTTTCCCGGGGAATATGATGGCCCCTGCCTTCAGATGAGAATGTCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGATTGCCATCTTGCTGGTGCCCTTGGACTGCTGAGGATTTTAATTTACAAGGTCAAGTTTGTCACCTCGTGGTCTCCTAGCATTACATTTTGACATCATCACTTTTATATCTATTTAGCGTTGTTGAATTCACTATGTACATTGTGCTGCAGGTCTACGTGGACGGTACGACCACCATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGGTAGTATTCGAGTATTTTTACATTTTCCATCATATGATTGTTTGCTATATATTTATTTTTTAACTACTGACTTCTGTAATTTGTGCTATGATCAGCTGTTATTTACCCCTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACTGAGGATAAAAAACAGAATGCTGTCTGCATGGAAAGGTACCGAAGAAGAGATGACAATGAATGTATACAGTGTTCGGATGCTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCACGCGTTGTGCTTGAAATGTTACCGTGAATGGTACTATCATCTCTTTTGTTCTACTTTTTCCGTTTTATCGGTAGCTTATTAAACTAAGAACAGCTAAGAACTAAGAACGATTAATTAAAATTTTCCTATGCACCTTAATATTTATTGTCTTCGCTAATTACAGAAGCTACAGAGTCGAATCATCTTTAATTGATTGGATTGAGCCCTTAATATTTATGACTGACTGCATTTAACTGTTTTCGCTACCTTATATCGACTTCAAATAATTACATTGTTCTCGTGAATGTTCTTCAGGCGAACACGTTCACAGTCTTGCCCCTTCTGTCGTGACAGTCTTAAGAGAGTAAACTCGGGCGATCTCTGGGTATTTACTGATAACAGGGACATTGTGGACATGGCAACGGTGACTCGAGAGAATCTCAAAAGGCTTTTCAAGTACGTAGATAAGTTGCCTACGATTGTTCCGGACTCCCTTTTCAACACCTACGATACGCACCTAAGATAAGTGATCGGTTCGTACATAATATAATGTCACTTTTTAAGTAGTTTTTTCTCCAAATGAACAGTCCTTTTGCAATGAGATGACTTGACAAAAGGACTGAAATTCATTCGGCTAAAATTTAGTGAAATCTAGAGAAGGCTTGCAGCTGTTTCTTCCCACTCTCCATTTCTGAAGAAAAAGAAAACCAGTCTTTGAGTTATTGTAGACTGGTAATGAGTGGTGGTGAAGTTTATATAGTTTGATTTAAAGTCTTCCATAAATATTGTATTTAACTCATTTGTACATGTTTGTAAATTCTTGATGGTTATCTATAGAAAGCAGCTTTGAATGCCTAAGTTGGGTTAAAGATCTTTTCGAGATGT

mRNA sequence

ATGCTTTGTTCCAGGGCATCGGAGTTTCCCGGGGAATATGATGGCCCCTGCCTTCAGATGAGAATGTCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGATTGCCATCTTGCTGGTGCCCTTGGACTGCTGAGGATTTTAATTTACAAGGTCTACGTGGACGGTACGACCACCATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGGTAGTATTCGAGTATTTTTACATTTTCCATCATATGATTCTGTTATTTACCCCTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACTGAGGATAAAAAACAGAATGCTGTCTGCATGGAAAGGTACCGAAGAAGAGATGACAATGAATGTATACAGTGTTCGGATGCTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCACGCGTTGTGCTTGAAATGTTACCGTGAATGGCGAACACGTTCACAGTCTTGCCCCTTCTGTCGTGACAGTCTTAAGAGAGTAAACTCGGGCGATCTCTGGGTATTTACTGATAACAGGGACATTGTGGACATGGCAACGGTGACTCGAGAGAATCTCAAAAGGCTTTTCAAGTACGTAGATAAGTTGCCTACGATTGTTCCGGACTCCCTTTTCAACACCTACGATACGCACCTAAGATAAGTGATCGGTTCGTACATAATATAATGTCACTTTTTAAGTAGTTTTTTCTCCAAATGAACAGTCCTTTTGCAATGAGATGACTTGACAAAAGGACTGAAATTCATTCGGCTAAAATTTAGTGAAATCTAGAGAAGGCTTGCAGCTGTTTCTTCCCACTCTCCATTTCTGAAGAAAAAGAAAACCAGTCTTTGAGTTATTGTAGACTGGTAATGAGTGGTGGTGAAGTTTATATAGTTTGATTTAAAGTCTTCCATAAATATTGTATTTAACTCATTTGTACATGTTTGTAAATTCTTGATGGTTATCTATAGAAAGCAGCTTTGAATGCCTAAGTTGGGTTAAAGATCTTTTCGAGATGT

Coding sequence (CDS)

ATGCTTTGTTCCAGGGCATCGGAGTTTCCCGGGGAATATGATGGCCCCTGCCTTCAGATGAGAATGTCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGATTGCCATCTTGCTGGTGCCCTTGGACTGCTGAGGATTTTAATTTACAAGGTCTACGTGGACGGTACGACCACCATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGGTAGTATTCGAGTATTTTTACATTTTCCATCATATGATTCTGTTATTTACCCCTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACTGAGGATAAAAAACAGAATGCTGTCTGCATGGAAAGGTACCGAAGAAGAGATGACAATGAATGTATACAGTGTTCGGATGCTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCACGCGTTGTGCTTGAAATGTTACCGTGAATGGCGAACACGTTCACAGTCTTGCCCCTTCTGTCGTGACAGTCTTAAGAGAGTAAACTCGGGCGATCTCTGGGTATTTACTGATAACAGGGACATTGTGGACATGGCAACGGTGACTCGAGAGAATCTCAAAAGGCTTTTCAAGTACGTAGATAAGTTGCCTACGATTGTTCCGGACTCCCTTTTCAACACCTACGATACGCACCTAAGATAA

Protein sequence

MLCSRASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR

Homology

[Close]

BLAST of Cp4.1LG10g09130 vs. Swiss-Prot
Match: RN141_PONAB (RING finger protein 141 OS=Pongo abelii GN=RNF141 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 139 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 198
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 211

Query: 199 DIVDMA 205
              DMA
Sbjct: 212 TEDDMA 214

[Close]

BLAST of Cp4.1LG10g09130 vs. Swiss-Prot
Match: RN141_BOVIN (RING finger protein 141 OS=Bos taurus GN=RNF141 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 139 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 198
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 211

Query: 199 DIVDMA 205
              DMA
Sbjct: 212 TEDDMA 214

[Close]

BLAST of Cp4.1LG10g09130 vs. Swiss-Prot
Match: RN141_CANLF (RING finger protein 141 OS=Canis lupus familiaris GN=RNF141 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 139 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 198
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 153 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 212

Query: 199 DIVDMA 205
              DMA
Sbjct: 213 TEDDMA 215

[Close]

BLAST of Cp4.1LG10g09130 vs. Swiss-Prot
Match: RN141_RAT (RING finger protein 141 OS=Rattus norvegicus GN=Rnf141 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 139 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 198
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 211

Query: 199 DIVDMA 205
              DMA
Sbjct: 212 TEDDMA 214

[Close]

BLAST of Cp4.1LG10g09130 vs. Swiss-Prot
Match: RN141_MOUSE (RING finger protein 141 OS=Mus musculus GN=Rnf141 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 139 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 198
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 211

Query: 199 DIVDMA 205
              DMA
Sbjct: 212 TEDDMA 214

[Close]

BLAST of Cp4.1LG10g09130 vs. TrEMBL
Match: A0A0A0KLG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517250 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 4.4e-120
Identity = 213/233 (91.42%), Postives = 216/233 (92.70%), Query Frame = 1


Query: 6   ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 65
           ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS
Sbjct: 28  ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 87

Query: 66  THERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDD 125
           THERKASIREFY             +VIYPSLLQLQRGVTDTEDKKQ AVCMERYRRRDD
Sbjct: 88  THERKASIREFY-------------AVIYPSLLQLQRGVTDTEDKKQKAVCMERYRRRDD 147

Query: 126 NECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 185
            ECIQ SDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR
Sbjct: 148 EECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 207

Query: 186 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           VNSGDLWVFTDNRDIVDMATVTRENLKRLFKY+DKLPTIVPDSLF+ YDTHLR
Sbjct: 208 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFDAYDTHLR 247

[Close]

BLAST of Cp4.1LG10g09130 vs. TrEMBL
Match: W9RNK9_9ROSA (RING finger protein 141 OS=Morus notabilis GN=L484_012097 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 3.2e-110
Identity = 197/233 (84.55%), Postives = 209/233 (89.70%), Query Frame = 1


Query: 6   ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 65
           AS+FP EYDG CLQMRMSYSPAAHLFLFLVQWTDC+LAGALGLLRILIYKVYVDGTTTMS
Sbjct: 28  ASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCNLAGALGLLRILIYKVYVDGTTTMS 87

Query: 66  THERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDD 125
           THERKASIREFY             +VIYPSLLQLQ+GVTDTEDKKQ AVCMERYRRRDD
Sbjct: 88  THERKASIREFY-------------AVIYPSLLQLQKGVTDTEDKKQKAVCMERYRRRDD 147

Query: 126 NECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 185
           +E  Q SD DIEREEECGICMET SK+VLPNCNHA+CLKCYREWRTRSQSCPFCRDSLKR
Sbjct: 148 DENRQFSDIDIEREEECGICMETNSKIVLPNCNHAMCLKCYREWRTRSQSCPFCRDSLKR 207

Query: 186 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           VNSGDLWVFTD RDIVDMATVTRENL+RLF Y+DKLP IVPD+LF+TYD+HLR
Sbjct: 208 VNSGDLWVFTDCRDIVDMATVTRENLRRLFMYIDKLPLIVPDNLFDTYDSHLR 247

[Close]

BLAST of Cp4.1LG10g09130 vs. TrEMBL
Match: A0A0D2RSE2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G086900 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 3.5e-109
Identity = 194/237 (81.86%), Postives = 208/237 (87.76%), Query Frame = 1


Query: 2   LCSRASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT 61
           LC RAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT
Sbjct: 27  LC-RASDFPREYDGECLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT 86

Query: 62  TTMSTHERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYR 121
           TTMSTHERKASIREFY             +VIYPSLLQLQRGVTDTEDKKQ AVCMERYR
Sbjct: 87  TTMSTHERKASIREFY-------------AVIYPSLLQLQRGVTDTEDKKQKAVCMERYR 146

Query: 122 RRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRD 181
           R DD E  Q  D D+EREEECGICME   K+VLPNCNHA+CLKCYREWRTRSQSCPFCRD
Sbjct: 147 RNDDKEYRQLIDVDVEREEECGICMELNGKIVLPNCNHAMCLKCYREWRTRSQSCPFCRD 206

Query: 182 SLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           SLKRVNSGDLWVFTD+R+I+DMATVTRENL+RLF Y+DKLP IVPD++F+TYD+HLR
Sbjct: 207 SLKRVNSGDLWVFTDSRNIIDMATVTRENLRRLFLYIDKLPLIVPDTIFDTYDSHLR 249

[Close]

BLAST of Cp4.1LG10g09130 vs. TrEMBL
Match: A0A0D2NNV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G086900 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 4.6e-109
Identity = 192/234 (82.05%), Postives = 206/234 (88.03%), Query Frame = 1


Query: 5   RASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTM 64
           RAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTM
Sbjct: 17  RASDFPREYDGECLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTM 76

Query: 65  STHERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRD 124
           STHERKASIREFY             +VIYPSLLQLQRGVTDTEDKKQ AVCMERYRR D
Sbjct: 77  STHERKASIREFY-------------AVIYPSLLQLQRGVTDTEDKKQKAVCMERYRRND 136

Query: 125 DNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLK 184
           D E  Q  D D+EREEECGICME   K+VLPNCNHA+CLKCYREWRTRSQSCPFCRDSLK
Sbjct: 137 DKEYRQLIDVDVEREEECGICMELNGKIVLPNCNHAMCLKCYREWRTRSQSCPFCRDSLK 196

Query: 185 RVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           RVNSGDLWVFTD+R+I+DMATVTRENL+RLF Y+DKLP IVPD++F+TYD+HLR
Sbjct: 197 RVNSGDLWVFTDSRNIIDMATVTRENLRRLFLYIDKLPLIVPDTIFDTYDSHLR 237

[Close]

BLAST of Cp4.1LG10g09130 vs. TrEMBL
Match: A0A061GGK3_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_029900 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 6.0e-109
Identity = 191/233 (81.97%), Postives = 207/233 (88.84%), Query Frame = 1


Query: 6   ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 65
           AS+FP EYDG C+QMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS
Sbjct: 28  ASDFPREYDGACVQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 87

Query: 66  THERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDD 125
           THERKASIREFY             +VIYPSLLQLQRGVTDTEDKKQ AVCMERYRRR+D
Sbjct: 88  THERKASIREFY-------------AVIYPSLLQLQRGVTDTEDKKQKAVCMERYRRRED 147

Query: 126 NECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 185
            E  Q +D D EREEECGICME  SK+VLPNCNHA+CLKCYREWR+RSQSCPFCRDSLKR
Sbjct: 148 EEYRQLTDVDFEREEECGICMEMNSKIVLPNCNHAMCLKCYREWRSRSQSCPFCRDSLKR 207

Query: 186 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           VNSGDLWVFTD+RDI+DMATVTRENL+RLF Y+DKLP IVPD++F+TYD+HLR
Sbjct: 208 VNSGDLWVFTDSRDIIDMATVTRENLRRLFMYIDKLPLIVPDTIFDTYDSHLR 247

[Close]

BLAST of Cp4.1LG10g09130 vs. TAIR10
Match: AT3G47160.2 (AT3G47160.2 RING/U-box superfamily protein)

HSP 1 Score: 303.1 bits (775), Expect = 1.5e-82
Identity = 141/236 (59.75%), Postives = 177/236 (75.00%), Query Frame = 1


Query: 5   RASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTM 64
           RA ++P E DG  +QMR+SY+PAA   LFLVQWTDCHLAG LGLLR+LIY  Y DG TTM
Sbjct: 35  RALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTM 94

Query: 65  STHERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRD 124
           S +ERK SI++FY             +VI+PSLLQL+RG+TD +D+KQ  VC  RYR +D
Sbjct: 95  SVYERKTSIKDFY-------------AVIFPSLLQLERGITDLDDRKQKEVCKIRYRNKD 154

Query: 125 DNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLK 184
           + E ++ S+ DIEREEECGICME  + VVLPNC H+LC+KCYR+W  RS+SCPFCRDSLK
Sbjct: 155 ETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCPFCRDSLK 214

Query: 185 RVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLF--NTYDTHLR 239
           RVNSGDLW+  +  D V+M T+ REN KRLF Y++KLP +VPD +F  + YD H++
Sbjct: 215 RVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVFASSPYDCHVK 257

[Close]

BLAST of Cp4.1LG10g09130 vs. TAIR10
Match: AT5G01520.1 (AT5G01520.1 RING/U-box superfamily protein)

HSP 1 Score: 300.8 bits (769), Expect = 7.3e-82
Identity = 139/222 (62.61%), Postives = 170/222 (76.58%), Query Frame = 1


Query: 6   ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 65
           ASE+P EYDG  +QMR+SYSPAAHLFLFL+QWTDCH AGALGLLRILIYK YVDG TTMS
Sbjct: 23  ASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGALGLLRILIYKAYVDGKTTMS 82

Query: 66  THERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDD 125
            HERK SIREFY              V++PSLLQL  G+TD E++KQ  +C +RYR++D 
Sbjct: 83  LHERKTSIREFY-------------DVLFPSLLQLHGGITDVEERKQKEICDKRYRKKDR 142

Query: 126 NECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 185
            +  + S+ D+EREEECGIC+E  +KVVLP CNH++C+ CYR WR RSQSCPFCR SLKR
Sbjct: 143 TDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKR 202

Query: 186 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPD 228
           VNSGDLW++T + +I D+  + +ENLKRL  Y+DKLP +  D
Sbjct: 203 VNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSD 231

[Close]

BLAST of Cp4.1LG10g09130 vs. TAIR10
Match: AT5G58787.1 (AT5G58787.1 RING/U-box superfamily protein)

HSP 1 Score: 298.1 bits (762), Expect = 4.7e-81
Identity = 145/235 (61.70%), Postives = 174/235 (74.04%), Query Frame = 1


Query: 6   ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 65
           A ++P E DG  +QMR+SYSP A  FLFLVQWTDC LAG LGLLR+LIY  Y DG TTMS
Sbjct: 24  ALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFLGLLRVLIYMTYADGKTTMS 83

Query: 66  THERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDD 125
            +ERKASIREF              +VI PSL QLQRGVTD +D KQ  VC  RYR++D+
Sbjct: 84  VYERKASIREF-------------QAVILPSLSQLQRGVTDIDDSKQKEVCKMRYRKKDE 143

Query: 126 NECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 185
           +E    S+ +IEREEECGICME  SKVVLPNC H+LC+KCYR+WR RSQSCPFCRDSLKR
Sbjct: 144 SEM---SEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKR 203

Query: 186 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLF--NTYDTHLR 239
           V+SGDLW+F D  D V++  + REN KRLF Y++KLP +VPD ++  + YD H+R
Sbjct: 204 VDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPYDFHVR 242

[Close]

BLAST of Cp4.1LG10g09130 vs. TAIR10
Match: AT1G24440.1 (AT1G24440.1 RING/U-box superfamily protein)

HSP 1 Score: 189.1 bits (479), Expect = 3.1e-48
Identity = 104/239 (43.51%), Postives = 139/239 (58.16%), Query Frame = 1


Query: 6   ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTD--CHLAGALGLLRILIYKVYVDGTTT 65
           A+E P    G  LQM++  S  A  F+FL+QW D  C L        ILIYKV  DG   
Sbjct: 28  AAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWMDFSCLLPRYFDFFHILIYKVRADGRWN 87

Query: 66  MSTHERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKK-----QNAVCME 125
            S + RKA+IREFYG             VI PSL +L     D  D+        A+  +
Sbjct: 88  RSRYGRKATIREFYG-------------VILPSLERLHINFADLPDESLWYPNPKAITKK 147

Query: 126 RYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPF 185
           +Y   D       +  D+ERE+ECGIC+E  +K+VLPNC HA+C+KCYR W T+S+SCPF
Sbjct: 148 QY---DIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPF 207

Query: 186 CRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHL 238
           CR S+KRVNS DLWV T + D+VD  TVT+E+L R + +++ LP   P++ F  Y+ +L
Sbjct: 208 CRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDYPEAAFLVYNEYL 250

[Close]

BLAST of Cp4.1LG10g09130 vs. TAIR10
Match: AT1G13195.1 (AT1G13195.1 RING/U-box superfamily protein)

HSP 1 Score: 186.0 bits (471), Expect = 2.6e-47
Identity = 102/236 (43.22%), Postives = 139/236 (58.90%), Query Frame = 1


Query: 4   SRASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTD----CHLAGALGLLRILIYKVYVD 63
           S A   P   +   LQM++ +S  A L LFL++W D    C +   L L  +L+YKV  D
Sbjct: 32  SLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSD 91

Query: 64  GTTTMSTHERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMER 123
           G   ++TH RKA+I EFYG             VI PSL QL     D  +       ++R
Sbjct: 92  GQPKLTTHGRKATISEFYG-------------VILPSL-QLLHSNLDELETTDIGFDLKR 151

Query: 124 YRRRDDNEC--IQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCP 183
             ++   E    + S+A +EREEECGIC+ET +K+VLPNC H++C+KCYR W  +SQSCP
Sbjct: 152 LSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCP 211

Query: 184 FCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTY 234
           FCR S+KRVNS DLWV   + D+VD  T +RE+L R + Y++ LP   P++LF  Y
Sbjct: 212 FCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVY 253

[Close]

BLAST of Cp4.1LG10g09130 vs. NCBI nr
Match: gi|659078724|ref|XP_008439873.1| (PREDICTED: uncharacterized protein LOC103484529 isoform X1 [Cucumis melo])

HSP 1 Score: 441.8 bits (1135), Expect = 7.5e-121
Identity = 215/237 (90.72%), Postives = 219/237 (92.41%), Query Frame = 1


Query: 2   LCSRASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT 61
           L  RASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT
Sbjct: 39  LSCRASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT 98

Query: 62  TTMSTHERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYR 121
           TTMSTHERKASIREFY             +VIYPSLLQLQRGVTDTEDKKQ AVCMERYR
Sbjct: 99  TTMSTHERKASIREFY-------------AVIYPSLLQLQRGVTDTEDKKQKAVCMERYR 158

Query: 122 RRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRD 181
           RRDD+ECIQ SDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRD
Sbjct: 159 RRDDDECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRD 218

Query: 182 SLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           SLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKY+DKLPTIVPDSLF+ YDTHLR
Sbjct: 219 SLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFDAYDTHLR 262

[Close]

BLAST of Cp4.1LG10g09130 vs. NCBI nr
Match: gi|659078726|ref|XP_008439874.1| (PREDICTED: uncharacterized protein LOC103484529 isoform X2 [Cucumis melo])

HSP 1 Score: 439.1 bits (1128), Expect = 4.9e-120
Identity = 213/233 (91.42%), Postives = 217/233 (93.13%), Query Frame = 1


Query: 6   ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 65
           ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS
Sbjct: 28  ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 87

Query: 66  THERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDD 125
           THERKASIREFY             +VIYPSLLQLQRGVTDTEDKKQ AVCMERYRRRDD
Sbjct: 88  THERKASIREFY-------------AVIYPSLLQLQRGVTDTEDKKQKAVCMERYRRRDD 147

Query: 126 NECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 185
           +ECIQ SDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR
Sbjct: 148 DECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 207

Query: 186 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           VNSGDLWVFTDNRDIVDMATVTRENLKRLFKY+DKLPTIVPDSLF+ YDTHLR
Sbjct: 208 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFDAYDTHLR 247

[Close]

BLAST of Cp4.1LG10g09130 vs. NCBI nr
Match: gi|449433859|ref|XP_004134714.1| (PREDICTED: uncharacterized protein LOC101207068 [Cucumis sativus])

HSP 1 Score: 438.7 bits (1127), Expect = 6.4e-120
Identity = 213/233 (91.42%), Postives = 216/233 (92.70%), Query Frame = 1


Query: 6   ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 65
           ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS
Sbjct: 28  ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 87

Query: 66  THERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDD 125
           THERKASIREFY             +VIYPSLLQLQRGVTDTEDKKQ AVCMERYRRRDD
Sbjct: 88  THERKASIREFY-------------AVIYPSLLQLQRGVTDTEDKKQKAVCMERYRRRDD 147

Query: 126 NECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 185
            ECIQ SDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR
Sbjct: 148 EECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 207

Query: 186 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           VNSGDLWVFTDNRDIVDMATVTRENLKRLFKY+DKLPTIVPDSLF+ YDTHLR
Sbjct: 208 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFDAYDTHLR 247

[Close]

BLAST of Cp4.1LG10g09130 vs. NCBI nr
Match: gi|703114054|ref|XP_010100542.1| (RING finger protein 141 [Morus notabilis])

HSP 1 Score: 406.0 bits (1042), Expect = 4.6e-110
Identity = 197/233 (84.55%), Postives = 209/233 (89.70%), Query Frame = 1


Query: 6   ASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMS 65
           AS+FP EYDG CLQMRMSYSPAAHLFLFLVQWTDC+LAGALGLLRILIYKVYVDGTTTMS
Sbjct: 28  ASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCNLAGALGLLRILIYKVYVDGTTTMS 87

Query: 66  THERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDD 125
           THERKASIREFY             +VIYPSLLQLQ+GVTDTEDKKQ AVCMERYRRRDD
Sbjct: 88  THERKASIREFY-------------AVIYPSLLQLQKGVTDTEDKKQKAVCMERYRRRDD 147

Query: 126 NECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKR 185
           +E  Q SD DIEREEECGICMET SK+VLPNCNHA+CLKCYREWRTRSQSCPFCRDSLKR
Sbjct: 148 DENRQFSDIDIEREEECGICMETNSKIVLPNCNHAMCLKCYREWRTRSQSCPFCRDSLKR 207

Query: 186 VNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           VNSGDLWVFTD RDIVDMATVTRENL+RLF Y+DKLP IVPD+LF+TYD+HLR
Sbjct: 208 VNSGDLWVFTDCRDIVDMATVTRENLRRLFMYIDKLPLIVPDNLFDTYDSHLR 247

[Close]

BLAST of Cp4.1LG10g09130 vs. NCBI nr
Match: gi|823171144|ref|XP_012484701.1| (PREDICTED: uncharacterized protein LOC105798969 isoform X1 [Gossypium raimondii])

HSP 1 Score: 402.5 bits (1033), Expect = 5.1e-109
Identity = 194/237 (81.86%), Postives = 208/237 (87.76%), Query Frame = 1


Query: 2   LCSRASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT 61
           LC RAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT
Sbjct: 27  LC-RASDFPREYDGECLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGT 86

Query: 62  TTMSTHERKASIREFYGSIRVFLHFPSYDSVIYPSLLQLQRGVTDTEDKKQNAVCMERYR 121
           TTMSTHERKASIREFY             +VIYPSLLQLQRGVTDTEDKKQ AVCMERYR
Sbjct: 87  TTMSTHERKASIREFY-------------AVIYPSLLQLQRGVTDTEDKKQKAVCMERYR 146

Query: 122 RRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRD 181
           R DD E  Q  D D+EREEECGICME   K+VLPNCNHA+CLKCYREWRTRSQSCPFCRD
Sbjct: 147 RNDDKEYRQLIDVDVEREEECGICMELNGKIVLPNCNHAMCLKCYREWRTRSQSCPFCRD 206

Query: 182 SLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFNTYDTHLR 239
           SLKRVNSGDLWVFTD+R+I+DMATVTRENL+RLF Y+DKLP IVPD++F+TYD+HLR
Sbjct: 207 SLKRVNSGDLWVFTDSRNIIDMATVTRENLRRLFLYIDKLPLIVPDTIFDTYDSHLR 249

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g09130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RN141_PONAB	1.9e-07	40.91	RING finger protein 141 OS=Pongo abelii GN=RNF141 PE=2 SV=1	[more]
RN141_BOVIN	1.9e-07	40.91	RING finger protein 141 OS=Bos taurus GN=RNF141 PE=2 SV=1	[more]
RN141_CANLF	1.9e-07	40.91	RING finger protein 141 OS=Canis lupus familiaris GN=RNF141 PE=2 SV=1	[more]
RN141_RAT	1.9e-07	40.91	RING finger protein 141 OS=Rattus norvegicus GN=Rnf141 PE=2 SV=1	[more]
RN141_MOUSE	1.9e-07	40.91	RING finger protein 141 OS=Mus musculus GN=Rnf141 PE=1 SV=2	[more]

BLAST of Cp4.1LG10g09130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLG2_CUCSA	4.4e-120	91.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517250 PE=4 SV=1	[more]
W9RNK9_9ROSA	3.2e-110	84.55	RING finger protein 141 OS=Morus notabilis GN=L484_012097 PE=4 SV=1	[more]
A0A0D2RSE2_GOSRA	3.5e-109	81.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G086900 PE=4 SV=1	[more]
A0A0D2NNV8_GOSRA	4.6e-109	82.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G086900 PE=4 SV=1	[more]
A0A061GGK3_THECC	6.0e-109	81.97	RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_029900 PE=4 SV=1	[more]

BLAST of Cp4.1LG10g09130 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G47160.2	1.5e-82	59.75	RING/U-box superfamily protein	[more]
AT5G01520.1	7.3e-82	62.61	RING/U-box superfamily protein	[more]
AT5G58787.1	4.7e-81	61.70	RING/U-box superfamily protein	[more]
AT1G24440.1	3.1e-48	43.51	RING/U-box superfamily protein	[more]
AT1G13195.1	2.6e-47	43.22	RING/U-box superfamily protein	[more]

BLAST of Cp4.1LG10g09130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078724\|ref\|XP_008439873.1\|	7.5e-121	90.72	PREDICTED: uncharacterized protein LOC103484529 isoform X1 [Cucumis melo]	[more]
gi\|659078726\|ref\|XP_008439874.1\|	4.9e-120	91.42	PREDICTED: uncharacterized protein LOC103484529 isoform X2 [Cucumis melo]	[more]
gi\|449433859\|ref\|XP_004134714.1\|	6.4e-120	91.42	PREDICTED: uncharacterized protein LOC101207068 [Cucumis sativus]	[more]
gi\|703114054\|ref\|XP_010100542.1\|	4.6e-110	84.55	RING finger protein 141 [Morus notabilis]	[more]
gi\|823171144\|ref\|XP_012484701.1\|	5.1e-109	81.86	PREDICTED: uncharacterized protein LOC105798969 isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017907	Znf_RING_CS
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g09130.1	Cp4.1LG10g09130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 142..179 score: 9.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 142..180 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 137..187 score: 2.0
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 157..166 scor
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 14..237 score: 8.9E
None	No IPR available	PANTHER	PTHR15315:SF20	SUBFAMILY NOT NAMED	coord: 14..237 score: 8.9E
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 139..185 score: 3.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 131..185 score: 6.03

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g09130	Cucsa.046140	Cucumber (Gy14) v1	cgycpeB0033
Cp4.1LG10g09130	CmaCh03G004690	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g09130	CmaCh07G002530	Cucurbita maxima (Rimu)	cmacpeB866
Cp4.1LG10g09130	CmoCh07G002460	Cucurbita moschata (Rifu)	cmocpeB806
Cp4.1LG10g09130	CmoCh03G004860	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g09130	Cla009610	Watermelon (97103) v1	cpewmB073
Cp4.1LG10g09130	Csa6G517250	Cucumber (Chinese Long) v2	cpecuB085
Cp4.1LG10g09130	MELO3C007294	Melon (DHL92) v3.5.1	cpemeB071
Cp4.1LG10g09130	ClCG01G022860	Watermelon (Charleston Gray)	cpewcgB061
Cp4.1LG10g09130	CSPI06G34520	Wild cucumber (PI 183967)	cpecpiB080
Cp4.1LG10g09130	Lsi01G003260	Bottle gourd (USVL1VR-Ls)	cpelsiB054
Cp4.1LG10g09130	MELO3C007294.2	Melon (DHL92) v3.6.1	cpemedB091
Cp4.1LG10g09130	CsaV3_6G050040	Cucumber (Chinese Long) v3	cpecucB0092
Cp4.1LG10g09130	Bhi03G000331	Wax gourd	cpewgoB0097
Cp4.1LG10g09130	CsGy6G034060	Cucumber (Gy14) v2	cgybcpeB710
Cp4.1LG10g09130	Carg13766	Silver-seed gourd	carcpeB1288
Cp4.1LG10g09130	Carg07788	Silver-seed gourd	carcpeB0913

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG10g09130	Cp4.1LG19g07300	Cucurbita pepo (Zucchini)	cpecpeB076

The following block(s) are covering this gene:

None