CmoCh03G004860 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G004860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RING finger protein 141
Location	Cmo_Chr03 : 5214269 .. 5217319 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGGTACTCCTCCGAAGCAACACGAAGCTCTAAAATACGCACTCTTCTAGAGAGAGAAAGAGAGAGAGAGAGAGAAAACGGAGCTCGCACGCTCTCTACCCACTTCTAGATAGAGATAGAGACAGAGGGTCTTTTTCTTTCTTCGATTGCGAATTAGGGTTTTTTCTTCGCGTTTTTGGAGCGGAAATTTGGAGGAATTTGTTCGGTTTTGCTTGTTTCTTCCCCGCTTGGGTGGAGATGTATGTATCTTCCATGAGAAAATCGTTCAAGGACTCTCTCAAATTGCTTGAAGCTGATATTCAGCATGCTAATACTCTGTAAGTGAGCTTTGATTCTTTTTTTTTTTCTCTGCCTTGAATATCGTCTTTGACTGTTTATGGAAGGCTTTTGTCTGATCACTTTTGGTGTCTGGGCTTCTCCCTCCGATTTTGCTTGTAATGCAGTTTCTAGGTTTGATTTTTAGTATTGTGGGTCTTGAAGTTGCTGTTTATGAGCCGTATACTCTTCGTTAATAATGAATTTTTGGAACGTGATTGTCGTTTACCTGCTGTGTTTGGAGCTTGGCAAACTCATTTTGTGTAATTTTTTATTTCAATGATGATTTGGTTTCTGTCTTGCTAACGCTCATATACACTCATATATAGGGACAAATTTGTGTTTCTTTCTCTGTTTTATAGTTCTCTTTCTTGAAAGGGAAATTGTTTGGTCATTTGGCGTTGGATGATTTGGCAATGTATATGTCACACTTCAAATAGTTTGTCATCATTCTCATGAATTGTTCTTGGGTTTATTGTTGATGTGTTCTCTAAGATTTCTGCATCCCACTGTGGACTTGTGGTGCAGATTAGGAACACTCTTTGACATATTTATGAATTCAAGAAGCGAATTATTTACCTATGTACCTCGTCTCTTGAACAATAACTTGAACTATGCAGTACTTTCTCTGAGAGAGTAGTTTAGAACTCATTTAATCTTGTTCTTCCTAGCTCTCCAGATGCGCCGTATCATATTTGATCTTTATTATTGGCAAATGTCTCCATTACGACTCATTTTCCCTTTTATTATAGCCAAATATCTTGTTTCATTTATTACTCTTTCCATTTATTGCTCTTTCCATATTCTTTGTAATTTATTCGAGTATGTAAATGATTATAGATAGAGAACTTTAGTGGTGGTTTAGCGAATATTCTCAGATGCATCTACTCTTTGAAGTGTGATAATGAATAAACAAGGCATACTTTATACTTCAAAAAAATTACTAAGCACAAGCACTTTCTTAGTTTTTTTGTTCTTTTTAAATTTGAAATTTTGAGAAATATGATCCGTTTTTTTTTTGTCTTCTTCTTAAAGAGAATAAAAGACAGAAAAGAAAAAAAAAACAAACATGTTCCAATGGGCCGTAGTTTTTATGTTATGGATCATGCTTTGTTCCAGGTATGAAAAGTTACAAATACATAATAAGCTGAAATGTGTCAACGCTTGTGATTTCTCTCTGGTTTGTTGTTCTTGGAGATTCTTGAGGTTGCTTGTTTTTCAAGTATGTCAGCTTAATGTTTACTGTTCCTGAGCTGTAGGGCATCGGAGTTTCCCGGGGAATATGATGGCCCCTGCCTTCAGATGAGAATGTCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGATTGCCATCTTGCAGGTGCTCTTGGACTGCTGAGGATTTTAATTTACAAGGTCAAGTTTGTCACCTCGTGGTCTCCTAGCATTACATTTTGACATCATCACTTTTATGTCTATTTAGCGTTATTGAATTCACTATGTACATTGTGCTGCAGGTCTACGTGGATGGTACGACCACCATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGGTAGTTTTCGAGTATTTTTACATTTTCCATCATATGATTGTTTGCTATATATTTATTTTTTAACTACTGACTTCTGTAATTTGTGCTATGATCAGCTGTTATTTACCCCTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACTGAGGATAAAAAACAGAATGCTGTCTGCATGGAAAGGTACCGAAGAAGAGATGACAATGAATGTATACAGTGTTCGGATGCTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCACGCGTTGTGCTTGAAATGTTACCGTGAATGGTACTATCATCTCTTTTGTTCTACTTTTAACGTTTTCTCGGTAGCTTATTAAACTAAGAACTAAGAAGGATTAATTAAAATTTTCCTATGCACCTTAATATTTATTGTCTTCGTTAATTACAGAAGCTACAGAGTCGAAAGCCTTTTGTTCATCTTTAATTGATTGGATGGAGCCCTTAATATTTATGACTGCCTGCATTTAACTGCTTTTGCTACCTTATATCGACTTCAAATAATTACATTGTTCTCATGAATGTTCTTCAGGCGAACACGTTCCCAGTCATGCCCCTTCTGTCGTGACAGTCTTAAGAGAGTAAACTCGGGCGATCTCTGGGTATTTACTGATAACAGGGACATTGTGGACATGGCAACGGTGACTCGAGAGAATCTCAAAAGGCTTTTCAAGTACGTAGATAAGTTGCCTACGATTGTTCCGGACTCCCTTTTCAACGCCTACGACACGCACCTAAGATAAGTGATCGGTTCGTACATAATATAATGTCACTTTTTAAGTAGTTTTTTCTCCAAATGAACAGTCCTTTTGCTATGAGATGACTTGACGAAAGGACTGAAATTCATTCGGCGGCTAAAATTTAGTGAAATCTAGAGAAGGCTTGCACAGCTGTTTCTTCCCACTCCCATTTCTGAAGAAAAAGAAAACCAGTCTTTGAGTTATTGTAGACTGGTAATGAGTGGTGGTGAAGTTTATATAGTTTGATTTAAAGTCTTCCATAAATATTGTATTTAACTCATTTGCACATGTTTGTAAATTCTTGATGTTATCTATAGAAAGCAGCTTTGAATGCCTATGTTGGGTTAAAGATCT

mRNA sequence

AAGAGGTACTCCTCCGAAGCAACACGAAGCTCTAAAATACGCACTCTTCTAGAGAGAGAAAGAGAGAGAGAGAGAGAAAACGGAGCTCGCACGCTCTCTACCCACTTCTAGATAGAGATAGAGACAGAGGGTCTTTTTCTTTCTTCGATTGCGAATTAGGGTTTTTTCTTCGCGTTTTTGGAGCGGAAATTTGGAGGAATTTGTTCGGTTTTGCTTGTTTCTTCCCCGCTTGGGTGGAGATGTATGTATCTTCCATGAGAAAATCGTTCAAGGACTCTCTCAAATTGCTTGAAGCTGATATTCAGCATGCTAATACTCTGGCATCGGAGTTTCCCGGGGAATATGATGGCCCCTGCCTTCAGATGAGAATGTCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGATTGCCATCTTGCAGGTGCTCTTGGACTGCTGAGGATTTTAATTTACAAGGTCTACGTGGATGGTACGACCACCATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGCTGTTATTTACCCCTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACTGAGGATAAAAAACAGAATGCTGTCTGCATGGAAAGGTACCGAAGAAGAGATGACAATGAATGTATACAGTGTTCGGATGCTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCACGCGTTGTGCTTGAAATGTTACCGTGAATGGCGAACACGTTCCCAGTCATGCCCCTTCTGTCGTGACAGTCTTAAGAGAGTAAACTCGGGCGATCTCTGGGTATTTACTGATAACAGGGACATTGTGGACATGGCAACGGTGACTCGAGAGAATCTCAAAAGGCTTTTCAAGTACGTAGATAAGTTGCCTACGATTGTTCCGGACTCCCTTTTCAACGCCTACGACACGCACCTAAGATAAGTGATCGGTTCGTACATAATATAATGTCACTTTTTAAGTAGTTTTTTCTCCAAATGAACAGTCCTTTTGCTATGAGATGACTTGACGAAAGGACTGAAATTCATTCGGCGGCTAAAATTTAGTGAAATCTAGAGAAGGCTTGCACAGCTGTTTCTTCCCACTCCCATTTCTGAAGAAAAAGAAAACCAGTCTTTGAGTTATTGTAGACTGGTAATGAGTGGTGGTGAAGTTTATATAGTTTGATTTAAAGTCTTCCATAAATATTGTATTTAACTCATTTGCACATGTTTGTAAATTCTTGATGTTATCTATAGAAAGCAGCTTTGAATGCCTATGTTGGGTTAAAGATCT

Coding sequence (CDS)

ATGTATGTATCTTCCATGAGAAAATCGTTCAAGGACTCTCTCAAATTGCTTGAAGCTGATATTCAGCATGCTAATACTCTGGCATCGGAGTTTCCCGGGGAATATGATGGCCCCTGCCTTCAGATGAGAATGTCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGATTGCCATCTTGCAGGTGCTCTTGGACTGCTGAGGATTTTAATTTACAAGGTCTACGTGGATGGTACGACCACCATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGCTGTTATTTACCCCTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACTGAGGATAAAAAACAGAATGCTGTCTGCATGGAAAGGTACCGAAGAAGAGATGACAATGAATGTATACAGTGTTCGGATGCTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCACGCGTTGTGCTTGAAATGTTACCGTGAATGGCGAACACGTTCCCAGTCATGCCCCTTCTGTCGTGACAGTCTTAAGAGAGTAAACTCGGGCGATCTCTGGGTATTTACTGATAACAGGGACATTGTGGACATGGCAACGGTGACTCGAGAGAATCTCAAAAGGCTTTTCAAGTACGTAGATAAGTTGCCTACGATTGTTCCGGACTCCCTTTTCAACGCCTACGACACGCACCTAAGATAA

Homology

[Close]

BLAST of CmoCh03G004860 vs. Swiss-Prot
Match: RN141_PONAB (RING finger protein 141 OS=Pongo abelii GN=RNF141 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 148 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 207
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 211

Query: 208 DIVDMA 214
              DMA
Sbjct: 212 TEDDMA 214

[Close]

BLAST of CmoCh03G004860 vs. Swiss-Prot
Match: RN141_BOVIN (RING finger protein 141 OS=Bos taurus GN=RNF141 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 148 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 207
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 211

Query: 208 DIVDMA 214
              DMA
Sbjct: 212 TEDDMA 214

[Close]

BLAST of CmoCh03G004860 vs. Swiss-Prot
Match: RN141_CANLF (RING finger protein 141 OS=Canis lupus familiaris GN=RNF141 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 148 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 207
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 153 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 212

Query: 208 DIVDMA 214
              DMA
Sbjct: 213 TEDDMA 215

[Close]

BLAST of CmoCh03G004860 vs. Swiss-Prot
Match: RN141_RAT (RING finger protein 141 OS=Rattus norvegicus GN=Rnf141 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 148 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 207
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 211

Query: 208 DIVDMA 214
              DMA
Sbjct: 212 TEDDMA 214

[Close]

BLAST of CmoCh03G004860 vs. Swiss-Prot
Match: RN141_MOUSE (RING finger protein 141 OS=Mus musculus GN=Rnf141 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 148 EEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNR 207
           EEEC ICM+  + ++LP C H+ C KC  +W  R ++CP CR  L+   + + WV +D  
Sbjct: 152 EEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWVVSDAP 211

Query: 208 DIVDMA 214
              DMA
Sbjct: 212 TEDDMA 214

[Close]

BLAST of CmoCh03G004860 vs. TrEMBL
Match: A0A0A0KLG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517250 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 9.9e-139
Identity = 241/247 (97.57%), Postives = 244/247 (98.79%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLK+LEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD ECIQ SDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDEECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKY+DKLPTIVPDSLF+
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFD 240

Query: 241 AYDTHLR 248
           AYDTHLR
Sbjct: 241 AYDTHLR 247

[Close]

BLAST of CmoCh03G004860 vs. TrEMBL
Match: W9RNK9_9ROSA (RING finger protein 141 OS=Morus notabilis GN=L484_012097 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.0e-127
Identity = 222/247 (89.88%), Postives = 235/247 (95.14%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MY+SSMRKSFKDSLK+LEADIQHANTLAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYISSMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DC+LAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQ+GVTDTEDKK
Sbjct: 61  DCNLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD+E  Q SD DIEREEECGICMET SK+VLPNCNHA+CLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDDENRQFSDIDIEREEECGICMETNSKIVLPNCNHAMCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
           RSQSCPFCRDSLKRVNSGDLWVFTD RDIVDMATVTRENL+RLF Y+DKLP IVPD+LF+
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDCRDIVDMATVTRENLRRLFMYIDKLPLIVPDNLFD 240

Query: 241 AYDTHLR 248
            YD+HLR
Sbjct: 241 TYDSHLR 247

[Close]

BLAST of CmoCh03G004860 vs. TrEMBL
Match: I1KLI6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G195400 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 4.3e-126
Identity = 217/247 (87.85%), Postives = 232/247 (93.93%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MYV+SMRKSFKDSLK+LEADIQHANTLAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQL++GVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD E  Q SD DIERE+ECGICM+  SK+VLPNCNHA+CLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDEEYRQSSDIDIEREDECGICMDMNSKIVLPNCNHAMCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
            SQSCPFCRDSLKRVNSGDLWVFTD RD+VDMATVTRENL+RLF Y+DKLP IVPDSLF+
Sbjct: 181 ISQSCPFCRDSLKRVNSGDLWVFTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFD 240

Query: 241 AYDTHLR 248
            YD+H+R
Sbjct: 241 TYDSHIR 247

[Close]

BLAST of CmoCh03G004860 vs. TrEMBL
Match: A0A0B2PDE5_GLYSO (RING finger protein 141 OS=Glycine soja GN=glysoja_027360 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 4.3e-126
Identity = 217/247 (87.85%), Postives = 232/247 (93.93%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MYV+SMRKSFKDSLK+LEADIQHANTLAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQL++GVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD E  Q SD DIERE+ECGICM+  SK+VLPNCNHA+CLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDEEYRQSSDIDIEREDECGICMDMNSKIVLPNCNHAMCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
            SQSCPFCRDSLKRVNSGDLWVFTD RD+VDMATVTRENL+RLF Y+DKLP IVPDSLF+
Sbjct: 181 ISQSCPFCRDSLKRVNSGDLWVFTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFD 240

Query: 241 AYDTHLR 248
            YD+H+R
Sbjct: 241 TYDSHIR 247

[Close]

BLAST of CmoCh03G004860 vs. TrEMBL
Match: A0A0S3S971_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G029000 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 4.3e-126
Identity = 216/247 (87.45%), Postives = 233/247 (94.33%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MYV+SMRKSFKDSLK+LEADIQHANTLAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQ+G+TDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGITDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD +  Q SD DIERE+ECGICM+  +K+VLPNCNHA+CLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDEDYRQSSDIDIEREDECGICMDMNTKIVLPNCNHAMCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
            SQSCPFCRDSLKRVNSGDLWVFTD RD+VDMATVTRENL+RLF Y+DKLP IVPDSLF+
Sbjct: 181 ISQSCPFCRDSLKRVNSGDLWVFTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFD 240

Query: 241 AYDTHLR 248
           AYD+H+R
Sbjct: 241 AYDSHIR 247

[Close]

BLAST of CmoCh03G004860 vs. TAIR10
Match: AT5G01520.1 (AT5G01520.1 RING/U-box superfamily protein)

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-95
Identity = 159/231 (68.83%), Postives = 190/231 (82.25%), Query Frame = 1


Query: 6   MRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLA 65
           MRKSFKDSLK LEADIQ ANTLASE+P EYDG  +QMR+SYSPAAHLFLFL+QWTDCH A
Sbjct: 1   MRKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFA 60

Query: 66  GALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKKQNAVC 125
           GALGLLRILIYK YVDG TTMS HERK SIREFY V++PSLLQL  G+TD E++KQ  +C
Sbjct: 61  GALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEIC 120

Query: 126 MERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSC 185
            +RYR++D  +  + S+ D+EREEECGIC+E  +KVVLP CNH++C+ CYR WR RSQSC
Sbjct: 121 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSC 180

Query: 186 PFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPD 237
           PFCR SLKRVNSGDLW++T + +I D+  + +ENLKRL  Y+DKLP +  D
Sbjct: 181 PFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSD 231

[Close]

BLAST of CmoCh03G004860 vs. TAIR10
Match: AT5G58787.1 (AT5G58787.1 RING/U-box superfamily protein)

HSP 1 Score: 342.8 bits (878), Expect = 1.7e-94
Identity = 164/241 (68.05%), Postives = 192/241 (79.67%), Query Frame = 1


Query: 9   SFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGAL 68
           SFKDSLK LEADIQHANTLA ++P E DG  +QMR+SYSP A  FLFLVQWTDC LAG L
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFL 64

Query: 69  GLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKKQNAVCMER 128
           GLLR+LIY  Y DG TTMS +ERKASIREF AVI PSL QLQRGVTD +D KQ  VC  R
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEVCKMR 124

Query: 129 YRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFC 188
           YR++D++E    S+ +IEREEECGICME  SKVVLPNC H+LC+KCYR+WR RSQSCPFC
Sbjct: 125 YRKKDESEM---SEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFC 184

Query: 189 RDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLF--NAYDTHL 248
           RDSLKRV+SGDLW+F D  D V++  + REN KRLF Y++KLP +VPD ++  + YD H+
Sbjct: 185 RDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPYDFHV 242

[Close]

BLAST of CmoCh03G004860 vs. TAIR10
Match: AT3G47160.2 (AT3G47160.2 RING/U-box superfamily protein)

HSP 1 Score: 336.3 bits (861), Expect = 1.6e-92
Identity = 158/253 (62.45%), Postives = 194/253 (76.68%), Query Frame = 1


Query: 9   SFKDSLKLLEADIQHANTLAS------------EFPGEYDGPCLQMRMSYSPAAHLFLFL 68
           SFKDSLK LEADIQHANT+ S            ++P E DG  +QMR+SY+PAA   LFL
Sbjct: 5   SFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQFLLFL 64

Query: 69  VQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDT 128
           VQWTDCHLAG LGLLR+LIY  Y DG TTMS +ERK SI++FYAVI+PSLLQL+RG+TD 
Sbjct: 65  VQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDL 124

Query: 129 EDKKQNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYR 188
           +D+KQ  VC  RYR +D+ E ++ S+ DIEREEECGICME  + VVLPNC H+LC+KCYR
Sbjct: 125 DDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYR 184

Query: 189 EWRTRSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPD 248
           +W  RS+SCPFCRDSLKRVNSGDLW+  +  D V+M T+ REN KRLF Y++KLP +VPD
Sbjct: 185 DWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPD 244

[Close]

BLAST of CmoCh03G004860 vs. TAIR10
Match: AT1G24440.1 (AT1G24440.1 RING/U-box superfamily protein)

HSP 1 Score: 229.6 bits (584), Expect = 2.1e-60
Identity = 119/253 (47.04%), Postives = 159/253 (62.85%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MY    + S++DSLK+LEADI+HAN LA+E P    G  LQM++  S  A  F+FL+QW 
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 61  D--CHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTED 120
           D  C L        ILIYKV  DG    S + RKA+IREFY VI PSL +L     D  D
Sbjct: 61  DFSCLLPRYFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADLPD 120

Query: 121 KK-----QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLK 180
           +        A+  ++Y   D       +  D+ERE+ECGIC+E  +K+VLPNC HA+C+K
Sbjct: 121 ESLWYPNPKAITKKQY---DIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCIK 180

Query: 181 CYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTI 240
           CYR W T+S+SCPFCR S+KRVNS DLWV T + D+VD  TVT+E+L R + +++ LP  
Sbjct: 181 CYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKD 240

Query: 241 VPDSLFNAYDTHL 247
            P++ F  Y+ +L
Sbjct: 241 YPEAAFLVYNEYL 250

[Close]

BLAST of CmoCh03G004860 vs. TAIR10
Match: AT1G13195.1 (AT1G13195.1 RING/U-box superfamily protein)

HSP 1 Score: 222.2 bits (565), Expect = 3.4e-58
Identity = 115/245 (46.94%), Postives = 157/245 (64.08%), Query Frame = 1


Query: 4   SSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTD-- 63
           SS   S+ +SLK+LEAD+QHAN+LA   P   +   LQM++ +S  A L LFL++W D  
Sbjct: 10  SSSSSSYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLS 69

Query: 64  --CHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDK 123
             C +   L L  +L+YKV  DG   ++TH RKA+I EFY VI PSL QL     D  + 
Sbjct: 70  SSCLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSL-QLLHSNLDELET 129

Query: 124 KQNAVCMERYRRRDDNEC--IQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYRE 183
                 ++R  ++   E    + S+A +EREEECGIC+ET +K+VLPNC H++C+KCYR 
Sbjct: 130 TDIGFDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRN 189

Query: 184 WRTRSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDS 243
           W  +SQSCPFCR S+KRVNS DLWV   + D+VD  T +RE+L R + Y++ LP   P++
Sbjct: 190 WNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEA 249

[Close]

BLAST of CmoCh03G004860 vs. NCBI nr
Match: gi|659078726|ref|XP_008439874.1| (PREDICTED: uncharacterized protein LOC103484529 isoform X2 [Cucumis melo])

HSP 1 Score: 501.1 bits (1289), Expect = 1.1e-138
Identity = 241/247 (97.57%), Postives = 245/247 (99.19%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLK+LEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD+ECIQ SDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDDECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKY+DKLPTIVPDSLF+
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFD 240

Query: 241 AYDTHLR 248
           AYDTHLR
Sbjct: 241 AYDTHLR 247

[Close]

BLAST of CmoCh03G004860 vs. NCBI nr
Match: gi|449433859|ref|XP_004134714.1| (PREDICTED: uncharacterized protein LOC101207068 [Cucumis sativus])

HSP 1 Score: 500.7 bits (1288), Expect = 1.4e-138
Identity = 241/247 (97.57%), Postives = 244/247 (98.79%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLK+LEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD ECIQ SDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDEECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKY+DKLPTIVPDSLF+
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFD 240

Query: 241 AYDTHLR 248
           AYDTHLR
Sbjct: 241 AYDTHLR 247

[Close]

BLAST of CmoCh03G004860 vs. NCBI nr
Match: gi|703114054|ref|XP_010100542.1| (RING finger protein 141 [Morus notabilis])

HSP 1 Score: 464.2 bits (1193), Expect = 1.5e-127
Identity = 222/247 (89.88%), Postives = 235/247 (95.14%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MY+SSMRKSFKDSLK+LEADIQHANTLAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYISSMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DC+LAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQ+GVTDTEDKK
Sbjct: 61  DCNLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD+E  Q SD DIEREEECGICMET SK+VLPNCNHA+CLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDDENRQFSDIDIEREEECGICMETNSKIVLPNCNHAMCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
           RSQSCPFCRDSLKRVNSGDLWVFTD RDIVDMATVTRENL+RLF Y+DKLP IVPD+LF+
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDCRDIVDMATVTRENLRRLFMYIDKLPLIVPDNLFD 240

Query: 241 AYDTHLR 248
            YD+HLR
Sbjct: 241 TYDSHLR 247

[Close]

BLAST of CmoCh03G004860 vs. NCBI nr
Match: gi|965602177|dbj|BAT89354.1| (hypothetical protein VIGAN_06029000 [Vigna angularis var. angularis])

HSP 1 Score: 458.8 bits (1179), Expect = 6.2e-126
Identity = 216/247 (87.45%), Postives = 233/247 (94.33%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MYV+SMRKSFKDSLK+LEADIQHANTLAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQ+G+TDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGITDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD +  Q SD DIERE+ECGICM+  +K+VLPNCNHA+CLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDEDYRQSSDIDIEREDECGICMDMNTKIVLPNCNHAMCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
            SQSCPFCRDSLKRVNSGDLWVFTD RD+VDMATVTRENL+RLF Y+DKLP IVPDSLF+
Sbjct: 181 ISQSCPFCRDSLKRVNSGDLWVFTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFD 240

Query: 241 AYDTHLR 248
           AYD+H+R
Sbjct: 241 AYDSHIR 247

[Close]

BLAST of CmoCh03G004860 vs. NCBI nr
Match: gi|920687074|gb|KOM31057.1| (hypothetical protein LR48_Vigan01g061200 [Vigna angularis])

HSP 1 Score: 458.8 bits (1179), Expect = 6.2e-126
Identity = 216/247 (87.45%), Postives = 233/247 (94.33%), Query Frame = 1


Query: 1   MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60
           MYV+SMRKSFKDSLK+LEADIQHANTLAS+FP EYDG CLQMRMSYSPAAHLFLFLVQWT
Sbjct: 1   MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQ+G+TDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGITDTEDKK 120

Query: 121 QNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180
           Q AVCMERYRRRDD +  Q SD DIERE+ECGICM+  +K+VLPNCNHA+CLKCYREWRT
Sbjct: 121 QKAVCMERYRRRDDEDYRQSSDIDIEREDECGICMDMNTKIVLPNCNHAMCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYVDKLPTIVPDSLFN 240
            SQSCPFCRDSLKRVNSGDLWVFTD RD+VDMATVTRENL+RLF Y+DKLP IVPDSLF+
Sbjct: 181 ISQSCPFCRDSLKRVNSGDLWVFTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFD 240

Query: 241 AYDTHLR 248
           AYD+H+R
Sbjct: 241 AYDSHIR 247

The following BLAST results are available for this feature:

BLAST of CmoCh03G004860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RN141_PONAB	2.0e-07	40.91	RING finger protein 141 OS=Pongo abelii GN=RNF141 PE=2 SV=1	[more]
RN141_BOVIN	2.0e-07	40.91	RING finger protein 141 OS=Bos taurus GN=RNF141 PE=2 SV=1	[more]
RN141_CANLF	2.0e-07	40.91	RING finger protein 141 OS=Canis lupus familiaris GN=RNF141 PE=2 SV=1	[more]
RN141_RAT	2.0e-07	40.91	RING finger protein 141 OS=Rattus norvegicus GN=Rnf141 PE=2 SV=1	[more]
RN141_MOUSE	2.0e-07	40.91	RING finger protein 141 OS=Mus musculus GN=Rnf141 PE=1 SV=2	[more]

BLAST of CmoCh03G004860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLG2_CUCSA	9.9e-139	97.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517250 PE=4 SV=1	[more]
W9RNK9_9ROSA	1.0e-127	89.88	RING finger protein 141 OS=Morus notabilis GN=L484_012097 PE=4 SV=1	[more]
I1KLI6_SOYBN	4.3e-126	87.85	Uncharacterized protein OS=Glycine max GN=GLYMA_07G195400 PE=4 SV=1	[more]
A0A0B2PDE5_GLYSO	4.3e-126	87.85	RING finger protein 141 OS=Glycine soja GN=glysoja_027360 PE=4 SV=1	[more]
A0A0S3S971_PHAAN	4.3e-126	87.45	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G029000 PE=...	[more]

BLAST of CmoCh03G004860 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G01520.1	2.1e-95	68.83	RING/U-box superfamily protein	[more]
AT5G58787.1	1.7e-94	68.05	RING/U-box superfamily protein	[more]
AT3G47160.2	1.6e-92	62.45	RING/U-box superfamily protein	[more]
AT1G24440.1	2.1e-60	47.04	RING/U-box superfamily protein	[more]
AT1G13195.1	3.4e-58	46.94	RING/U-box superfamily protein	[more]

BLAST of CmoCh03G004860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078726\|ref\|XP_008439874.1\|	1.1e-138	97.57	PREDICTED: uncharacterized protein LOC103484529 isoform X2 [Cucumis melo]	[more]
gi\|449433859\|ref\|XP_004134714.1\|	1.4e-138	97.57	PREDICTED: uncharacterized protein LOC101207068 [Cucumis sativus]	[more]
gi\|703114054\|ref\|XP_010100542.1\|	1.5e-127	89.88	RING finger protein 141 [Morus notabilis]	[more]
gi\|965602177\|dbj\|BAT89354.1\|	6.2e-126	87.45	hypothetical protein VIGAN_06029000 [Vigna angularis var. angularis]	[more]
gi\|920687074\|gb\|KOM31057.1\|	6.2e-126	87.45	hypothetical protein LR48_Vigan01g061200 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G004860.1	CmoCh03G004860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 151..188 score: 9.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 151..189 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 146..196 score: 2.1
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 166..175 scor
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 36..246 score: 6.7E
None	No IPR available	PANTHER	PTHR15315:SF20	SUBFAMILY NOT NAMED	coord: 36..246 score: 6.7E
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 148..194 score: 3.5
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 148..195 score: 6.45

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G004860	Cucsa.046140	Cucumber (Gy14) v1	cgycmoB0042
CmoCh03G004860	CmaCh03G004690	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G004860	CmaCh07G002530	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G004860	Cla009610	Watermelon (97103) v1	cmowmB623
CmoCh03G004860	Csa6G517250	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G004860	MELO3C007294	Melon (DHL92) v3.5.1	cmomeB600
CmoCh03G004860	ClCG01G022860	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G004860	CSPI06G34520	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G004860	Lsi01G003260	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G004860	Cp4.1LG10g09130	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G004860	Cp4.1LG19g07300	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G004860	MELO3C007294.2	Melon (DHL92) v3.6.1	cmomedB686
CmoCh03G004860	CsaV3_6G050040	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G004860	Cla97C01G022760	Watermelon (97103) v2	cmowmbB642
CmoCh03G004860	Bhi03G000331	Wax gourd	cmowgoB0781
CmoCh03G004860	CsGy6G034060	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G004860	Carg13766	Silver-seed gourd	carcmoB1246
CmoCh03G004860	Carg07788	Silver-seed gourd	carcmoB0886

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G004860	CmoCh07G002460	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:

None