Cp4.1LG10g04800 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g04800
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protamine P1 family protein
Location	Cp4.1LG10 : 1182664 .. 1183470 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAATCGGTGAAACCGATTTCCAGTCCCAGTCGGATCGACCTGTTTCCGCCGCCATTGATGAGCTTTCTGAGGGCTGATGCCGGAAATCGGAGTAAAAGCGGCCGGTCTCGCTCCAGTCCGATCTTCATCAGGAAGAAGAACGTCGCCATTGAAACTCAAGAGCCGTCCTCTCCGAAGGTTACTTGTATGGGCCAAGTCCGTACCAATAAACGTTCCTCTAGACCTCCCGCCAAGCGATGCCGATGGATTAGAAGCGTTCTCTCTTTCAATCGACGCCATTGTAGAACCTTCTGGAACAGGTCGACGATGTTCTTCCAAGGAAAGCGTGAAATTAGACGAAAATCATCGATCACTGAATCTCGCGTCCGAGACGAAGCGGAAGATTCGGAGCAAAATGAAGAGAGCGAGGGAGCAGCCAGAGATGAGGTCTTTGCGTCATCGGCTCCATCGCCGCCGAAAAACGCTCTTATCCTGACGAGGTGTAGATCTGCACCTCATCGGTCGTCGTTTTACGGCAATCGGTACGAGATTTCGTCGATTAGGAGCGACAGAGCTGAAGAAGAAGAAGGAGAAGGAGAGAAAACAGAGCACAATAATGGAAACGGAGCGGCATCGAAAAATGAGTCCCAAAATTCGGAGCGAATGTTCCGAAAACTCGAAAATTCAAACGGAGAAGAAGATCGAAGCTCTGTAAATAACAAAGAGAGCAAAATCGAGGAAAACTCAATGTCCAATCGGAGCCTGATTCTAACGAGATGCAAATCGGAACCTGGCAGAATTAGGGAGGAACTTTACGGATAA

mRNA sequence

ATGAAGCAATCGGTGAAACCGATTTCCAGTCCCAGTCGGATCGACCTGTTTCCGCCGCCATTGATGAGCTTTCTGAGGGCTGATGCCGGAAATCGGAGTAAAAGCGGCCGGTCTCGCTCCAGTCCGATCTTCATCAGGAAGAAGAACGTCGCCATTGAAACTCAAGAGCCGTCCTCTCCGAAGGTTACTTGTATGGGCCAAGTCCGTACCAATAAACGTTCCTCTAGACCTCCCGCCAAGCGATGCCGATGGATTAGAAGCGTTCTCTCTTTCAATCGACGCCATTGTAGAACCTTCTGGAACAGGTCGACGATGTTCTTCCAAGGAAAGCGTGAAATTAGACGAAAATCATCGATCACTGAATCTCGCGTCCGAGACGAAGCGGAAGATTCGGAGCAAAATGAAGAGAGCGAGGGAGCAGCCAGAGATGAGGTCTTTGCGTCATCGGCTCCATCGCCGCCGAAAAACGCTCTTATCCTGACGAGGTGTAGATCTGCACCTCATCGGTCGTCGTTTTACGGCAATCGGTACGAGATTTCGTCGATTAGGAGCGACAGAGCTGAAGAAGAAGAAGGAGAAGGAGAGAAAACAGAGCACAATAATGGAAACGGAGCGGCATCGAAAAATGAGTCCCAAAATTCGGAGCGAATGTTCCGAAAACTCGAAAATTCAAACGGAGAAGAAGATCGAAGCTCTGTAAATAACAAAGAGAGCAAAATCGAGGAAAACTCAATGTCCAATCGGAGCCTGATTCTAACGAGATGCAAATCGGAACCTGGCAGAATTAGGGAGGAACTTTACGGATAA

Coding sequence (CDS)

ATGAAGCAATCGGTGAAACCGATTTCCAGTCCCAGTCGGATCGACCTGTTTCCGCCGCCATTGATGAGCTTTCTGAGGGCTGATGCCGGAAATCGGAGTAAAAGCGGCCGGTCTCGCTCCAGTCCGATCTTCATCAGGAAGAAGAACGTCGCCATTGAAACTCAAGAGCCGTCCTCTCCGAAGGTTACTTGTATGGGCCAAGTCCGTACCAATAAACGTTCCTCTAGACCTCCCGCCAAGCGATGCCGATGGATTAGAAGCGTTCTCTCTTTCAATCGACGCCATTGTAGAACCTTCTGGAACAGGTCGACGATGTTCTTCCAAGGAAAGCGTGAAATTAGACGAAAATCATCGATCACTGAATCTCGCGTCCGAGACGAAGCGGAAGATTCGGAGCAAAATGAAGAGAGCGAGGGAGCAGCCAGAGATGAGGTCTTTGCGTCATCGGCTCCATCGCCGCCGAAAAACGCTCTTATCCTGACGAGGTGTAGATCTGCACCTCATCGGTCGTCGTTTTACGGCAATCGGTACGAGATTTCGTCGATTAGGAGCGACAGAGCTGAAGAAGAAGAAGGAGAAGGAGAGAAAACAGAGCACAATAATGGAAACGGAGCGGCATCGAAAAATGAGTCCCAAAATTCGGAGCGAATGTTCCGAAAACTCGAAAATTCAAACGGAGAAGAAGATCGAAGCTCTGTAAATAACAAAGAGAGCAAAATCGAGGAAAACTCAATGTCCAATCGGAGCCTGATTCTAACGAGATGCAAATCGGAACCTGGCAGAATTAGGGAGGAACTTTACGGATAA

Protein sequence

MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSPKVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRRHCRTFWNRSTMFFQGKREIRRKSSITESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNSERMFRKLENSNGEEDRSSVNNKESKIEENSMSNRSLILTRCKSEPGRIREELYG

Homology

[Close]

BLAST of Cp4.1LG10g04800 vs. TrEMBL
Match: A0A0A0KK43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G439970 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.3e-79
Identity = 187/271 (69.00%), Postives = 206/271 (76.01%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRADAGNRSKS RSRSSPIF+ KKNVAIETQEPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFVGKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRHCRTFWNRSTMFFQGKREIRRKSSI 120
           KVTCMGQVRTNK SS + PA RCRWIRSVLSFNRRHCRTFWNRS M  +GKREIRR   I
Sbjct: 61  KVTCMGQVRTNKHSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLCRGKREIRR---I 120

Query: 121 TESRVRDEAEDSEQN-EESEGAARDEVFAS-SAPSPPKNALILTRCRSAPHRSSFYGNRY 180
           +ESRV +EAEDSE++ EE +G   D V++S S PSPPKNALIL+RCRSAP+RSSF G RY
Sbjct: 121 SESRVGNEAEDSEKDEEEDDGRDGDAVYSSFSVPSPPKNALILSRCRSAPNRSSFNGTRY 180

Query: 181 EISSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNSERMFRKLENSNGEEDRSSVNNKE 240
             SSI SD   E E E EKTE    N AASK E   SER+ +K+E+S G+ D  SVN   
Sbjct: 181 RSSSITSDGTVEVE-EEEKTEGGFRNNAASKIELGKSERLLKKVESSKGDGDSKSVNGNR 240

Query: 241 SKIEENSMSNRSLILTRCKSEPGRIREELYG 269
                    N +LILTR KSEPGRI E+LYG
Sbjct: 241 ---------NLNLILTRSKSEPGRIAEKLYG 258

[Close]

BLAST of Cp4.1LG10g04800 vs. TrEMBL
Match: F6HR04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02260 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-38
Identity = 131/300 (43.67%), Postives = 168/300 (56.00%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MK S K +SSP R + FPPPLM FLR++ G+RS+ GRSRSSP+F+RKKN AIETQEPSSP
Sbjct: 149 MKLSSKTMSSPGRTEKFPPPLMRFLRSNVGSRSR-GRSRSSPMFVRKKNTAIETQEPSSP 208

Query: 61  KVTCMGQVRT--NKRSSRPPAKR-------CRWIRSVLSFNR-------RHCRTFWNRST 120
           KVTC+GQVR   +K+ S    K        CRWIR+ L  N        +  R  W +  
Sbjct: 209 KVTCIGQVRVRRSKQGSGKATKARKKTRGWCRWIRNALCCNHFVGRLKPKPFRPVWRKWV 268

Query: 121 MF----FQGKREIRRKSSITESRVRDEAEDSEQ-----NEESEGAARDEVFASSAPSPPK 180
           +F    F+ K EIR  SS  ES++ D  E+SEQ     NEE E      VF SS+ SPPK
Sbjct: 269 LFFRVRFRRKSEIREDSSRIESKLEDRVEESEQSDDVGNEEEEA----RVFYSSSFSPPK 328

Query: 181 NALILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNSE 240
           NAL+LTRCRSAP+RSS   +R+  S + ++  EE++ E E T+  N    AS+NE  + +
Sbjct: 329 NALLLTRCRSAPYRSSSLASRFWGSPLATE--EEQKTEPENTDQQN---PASENEPSSRD 388

Query: 241 RMFRKLENSNGEEDRSSVNNKESKIEENS--------------MSNRSLILTRCKSEPGR 262
                  +   + D   +N  E    E S               +   LILTRCKSEP R
Sbjct: 389 SAAESRTDPETDRDSEYLNQSEDSTSERSTKPTKTEAFKTGEEATAHPLILTRCKSEPAR 438

[Close]

BLAST of Cp4.1LG10g04800 vs. TrEMBL
Match: A5C568_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015697 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 130/300 (43.33%), Postives = 166/300 (55.33%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MK S K +SSP R + FPPPLM FL ++ G+RS+ GRSRSSP+F+RKKN AIETQEPSSP
Sbjct: 425 MKLSSKTMSSPGRTEKFPPPLMRFLXSNVGSRSR-GRSRSSPMFVRKKNTAIETQEPSSP 484

Query: 61  KVTCMGQVRT--NKRSSRPPAKR-------CRWIRSVLSFNR-------RHCRTFWNRST 120
           KVTC+GQVR   +K+ S    K        CRWIR  L  N        +  R  W +  
Sbjct: 485 KVTCIGQVRVRRSKQGSGKATKARKKTRGWCRWIRKALCCNHFVGRLKPKPFRPVWRKWV 544

Query: 121 MF----FQGKREIRRKSSITESRVRDEAEDSEQ-----NEESEGAARDEVFASSAPSPPK 180
           +F    F+ K EIR  SS  ES++ D  E+SEQ     NEE E      VF SS+ SPPK
Sbjct: 545 LFFRVRFRRKSEIREDSSRIESKLEDRVEESEQSDDVGNEEEEA----RVFYSSSFSPPK 604

Query: 181 NALILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNSE 240
           NAL+LTRCRSAP+RSS   +R+  S + ++  EE++ E E T+  N    AS+NE  + +
Sbjct: 605 NALLLTRCRSAPYRSSSLASRFWGSPLATE--EEQKTEPENTDQQN---PASENEPSSRD 664

Query: 241 RMFRKLENSNGEEDRSSVNNKESKIEENS--------------MSNRSLILTRCKSEPGR 262
                  +   + D   +N  E    E S               +   LILTRCKSEP R
Sbjct: 665 SAAESRTDPETDRDSEYLNQSEDSTSERSTKPTKTEAFKTGEEATAHPLILTRCKSEPAR 714

[Close]

BLAST of Cp4.1LG10g04800 vs. TrEMBL
Match: U5G778_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s13260g PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.9e-37
Identity = 135/309 (43.69%), Postives = 176/309 (56.96%), Query Frame = 1


Query: 1   MKQSVKPISSPSRID-LFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSS 60
           MK S KPISSP R +  +PPPLM FLR + G+RS+ GRSRSSP+F+RKKN+AIETQEPSS
Sbjct: 1   MKLSAKPISSPGRTEKYYPPPLMRFLRTNVGSRSR-GRSRSSPMFVRKKNIAIETQEPSS 60

Query: 61  PKVTCMGQVR------TNKRSSRPPAKRCRWIRSVL----SFNRRHC-----RTFWNRST 120
           PKVTCMGQVR       N +  +P  +RC+WIR  L     FNRR       R  W +  
Sbjct: 61  PKVTCMGQVRVRRSKQANTQPGKPKKRRCKWIRKTLLCHHHFNRRRLKLKSFRPSWPKWV 120

Query: 121 MFFQGKREIRRK------SSITESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNAL 180
            FF+   E + K      SS  E ++   +ED EQ  E E     +V+ S+  +PP+NAL
Sbjct: 121 HFFRVGIERKNKIVEDCSSSKVEPKIGVRSEDFEQEREEE-EMEPKVYVSTENTPPRNAL 180

Query: 181 ILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEK--TEHNNGNGA-ASKNESQNSE 240
           +LTRCRSAP+RSS    R+  S   S    EE G+ ++   + N  NG+  SK ES + E
Sbjct: 181 LLTRCRSAPYRSSSLAGRFWGSPSES----EETGQKQRCTPQENGENGSPTSKRESVSQE 240

Query: 241 ---------------RMFRKLE---NSNGEEDRSSVNNKESKIEENSMSNRSLILTRCKS 267
                            F++ E    S  E + +S N +ESK E+ S + R L+LTRCKS
Sbjct: 241 PDQESSLDPETEVKISHFKESEGSITSIRERNANSANIEESKTEKVS-TVRPLVLTRCKS 300

[Close]

BLAST of Cp4.1LG10g04800 vs. TrEMBL
Match: A0A061ESH6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_022109 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-36
Identity = 131/312 (41.99%), Postives = 166/312 (53.21%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MK S KPISSP R + +PPPLM FLR++ G+RS+ GRSRSSP+F+RKKN AIETQEP+SP
Sbjct: 1   MKLSAKPISSPGRAEKYPPPLMRFLRSNVGSRSR-GRSRSSPMFVRKKNTAIETQEPTSP 60

Query: 61  KVTCMGQVRTNK---------RSSRPPAKR--CRWIRSVLSFN--------RRHCRTFWN 120
           KVTCMGQVR  +         R   P  +R  C WIR+ L           +  CR  W 
Sbjct: 61  KVTCMGQVRVKRSKQAGTKPGRHGAPTRRRSLCNWIRNALFCRHFAGKVKAKPSCRPTWK 120

Query: 121 RSTMFFQ----GKREIRRKSSITESRVRDEAEDSEQNEESEGAARDEV---FASSAPSPP 180
           +   FFQ     K + R  SS   +++ D  E +E+ EE       E     +SS+ SPP
Sbjct: 121 KWGAFFQMGSCRKPKTREDSSKFGNKIEDFVEGNEEEEEESEKNEKEAKIFVSSSSSSPP 180

Query: 181 KNALILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEKTEHNNGNG---------- 240
           KNALILTRCRSAP+RSS    R+  S + +    EEE E  + E     G          
Sbjct: 181 KNALILTRCRSAPYRSSSLACRFWESPLANQETNEEETEETEEEKRENRGFQKEEAEVPT 240

Query: 241 ----AASKNESQNSERMFRKLENS----NGEEDRSS--VNNKESKIEENSMSNRSLILTR 267
               +  +N    S+    KLE S      EE ++    NN+E K E+   + R LILTR
Sbjct: 241 SEKVSIYRNSDHGSQMDSEKLEKSGFCKEFEEGKTEKPENNEELKTEQFG-NVRPLILTR 300

[Close]

BLAST of Cp4.1LG10g04800 vs. TAIR10
Match: AT5G03110.1 (AT5G03110.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 106/292 (36.30%), Postives = 147/292 (50.34%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRA--DAGNRSKS-----GRSRSSPIFIRK-KNVAI 60
           M  S +P+SSP R++ +PPP M FLR+  + G+ S+S     GRSR+SP+F+R+ K+ A 
Sbjct: 1   MMISRRPVSSPGRVEKYPPPFMGFLRSKSNGGSTSRSRSRSRGRSRASPLFVRRNKSAAA 60

Query: 61  ETQEPSSPKVTCMGQVRTNKRSSR--------PPAKRCRWIRSVLSFNRRHCR----TFW 120
             QEPSSPKVTCMGQVR N+   +        P  +RC W+R+   +N+   +    TFW
Sbjct: 61  VAQEPSSPKVTCMGQVRVNRSKPKIKPESRDNPTRRRCEWLRNASFYNKFAGKIKTMTFW 120

Query: 121 N--RSTMFFQGKREIRRKSSITESRVRDEAED-SEQNEESEGAARDEV---FASSAPSPP 180
              R   F    R ++ K S          E   E  EE EG    E+   F S A +PP
Sbjct: 121 PKWRLCSFSCACRNLKEKDSPRSQLDHPTTESVREIKEEIEGEENFEIPKLFVSPATTPP 180

Query: 181 KNALILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNS 240
            NAL+LTR RSAP+RSS    R+           EE  + E     N      ++E  +S
Sbjct: 181 INALLLTRSRSAPYRSSSLAFRF----------WEENNQREVESQQN-----VRSEKTDS 240

Query: 241 ERMFRKLENSNGEEDRSSVNNKESKIEENSMSNRSLILTRCKSEPGRIREEL 267
           E    K+   NG  +   V+  E +  +     R  +LTR KSEP RI E++
Sbjct: 241 EVPIEKI---NGFHEPEYVDRDEEEFTKLRFV-RQPVLTRSKSEPARIGEKM 273

[Close]

BLAST of Cp4.1LG10g04800 vs. TAIR10
Match: AT2G37100.1 (AT2G37100.1 protamine P1 family protein)

HSP 1 Score: 101.7 bits (252), Expect = 7.3e-22
Identity = 109/302 (36.09%), Postives = 144/302 (47.68%), Query Frame = 1


Query: 4   SVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNV--AIETQEPSSPK 63
           S +P+SSP R +  PP LM FLR  + +RS+S RSR  PIF R+KN   A ETQEP+SPK
Sbjct: 5   SSRPVSSPGRTEN-PPLLMRFLRTKSRSRSRS-RSRR-PIFFRRKNASAAAETQEPTSPK 64

Query: 64  VTCMGQVRTNKRSSRPP---------------AKRCRWIRSVLSFNRRHCRTF------- 123
           VTCMGQVR N+     P               ++RC W+++        C +F       
Sbjct: 65  VTCMGQVRINRSKKPKPETARVSGGATERRRQSRRCGWVKNAFP-----CHSFTGIIKPT 124

Query: 124 -----WNRSTMF----FQGKREIRRKSSITESRVRDEAEDSEQNEESEGAARDEVFASSA 183
                W +   F    F  K E R  SS +E        + E+ EE+      E  ASS 
Sbjct: 125 CFSPVWRKWKSFSHASFSKKSEKRSSSSRSEPIFGRSTVEPEEPEETRKEENQEEEASSC 184

Query: 184 PS----PPKNALILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEKTEHNNGNGAA 243
            S    PP+NA +LTRCRSAP+RS    N     S+  D  +EE  +     H     A+
Sbjct: 185 KSFTATPPRNAFLLTRCRSAPYRSPSSAN-----SLFED--QEETNKAPFQRH-----AS 244

Query: 244 SKNESQNSERMFRKLENSNGEED--RSSVNNKESKIEENSMSNRSLILTRCKSEPGRIRE 267
           S+N S + E      E +   ED  R S  ++E K        + LILTRC SEP R+  
Sbjct: 245 SENVSVSEEPKTSVTETTERLEDSRRESAASEEPKRSVLGSPRQCLILTRCNSEPARLVP 286

[Close]

BLAST of Cp4.1LG10g04800 vs. NCBI nr
Match: gi|659097998|ref|XP_008449922.1| (PREDICTED: uncharacterized protein LOC103491651 [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 3.4e-85
Identity = 194/271 (71.59%), Postives = 213/271 (78.60%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRADAGNRSKS RSRSSPIFIRKKNVAIET+EPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFIRKKNVAIETEEPSSP 60

Query: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRHCRTFWNRSTMFFQGKREIRRKSSI 120
           KVTCMGQVRTNKRSS + PA RCRWIRSVLSFNRRHCRTFWNRS M F+GKREIRR   I
Sbjct: 61  KVTCMGQVRTNKRSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLFRGKREIRR---I 120

Query: 121 TESRVRDEAEDSEQNEESE-GAARDEVFASSA-PSPPKNALILTRCRSAPHRSSFYGNRY 180
           +ESRV +EAEDSE++EE + G  RD V+ASS+ PSPPKNALILTRCRS P+RSSF  NRY
Sbjct: 121 SESRVGNEAEDSEKDEEDDDGRDRDAVYASSSVPSPPKNALILTRCRSTPNRSSFNDNRY 180

Query: 181 EISSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNSERMFRKLENSNGEEDRSSVNNKE 240
             SSI SD +  EE E  KTE   GN  ASK E +NSER+ +KLE+S G+ D  SVN   
Sbjct: 181 RSSSITSDGSTVEEEE--KTERGFGNNTASKIELRNSERLLKKLESSKGDGDCKSVN--- 240

Query: 241 SKIEENSMSNRSLILTRCKSEPGRIREELYG 269
                    NR+LILTRCKSEP RI E+LYG
Sbjct: 241 --------GNRNLILTRCKSEPARIAEKLYG 255

[Close]

BLAST of Cp4.1LG10g04800 vs. NCBI nr
Match: gi|700192927|gb|KGN48131.1| (hypothetical protein Csa_6G439970 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 4.7e-79
Identity = 187/271 (69.00%), Postives = 206/271 (76.01%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRADAGNRSKS RSRSSPIF+ KKNVAIETQEPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFVGKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRHCRTFWNRSTMFFQGKREIRRKSSI 120
           KVTCMGQVRTNK SS + PA RCRWIRSVLSFNRRHCRTFWNRS M  +GKREIRR   I
Sbjct: 61  KVTCMGQVRTNKHSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLCRGKREIRR---I 120

Query: 121 TESRVRDEAEDSEQN-EESEGAARDEVFAS-SAPSPPKNALILTRCRSAPHRSSFYGNRY 180
           +ESRV +EAEDSE++ EE +G   D V++S S PSPPKNALIL+RCRSAP+RSSF G RY
Sbjct: 121 SESRVGNEAEDSEKDEEEDDGRDGDAVYSSFSVPSPPKNALILSRCRSAPNRSSFNGTRY 180

Query: 181 EISSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNSERMFRKLENSNGEEDRSSVNNKE 240
             SSI SD   E E E EKTE    N AASK E   SER+ +K+E+S G+ D  SVN   
Sbjct: 181 RSSSITSDGTVEVE-EEEKTEGGFRNNAASKIELGKSERLLKKVESSKGDGDSKSVNGNR 240

Query: 241 SKIEENSMSNRSLILTRCKSEPGRIREELYG 269
                    N +LILTR KSEPGRI E+LYG
Sbjct: 241 ---------NLNLILTRSKSEPGRIAEKLYG 258

[Close]

BLAST of Cp4.1LG10g04800 vs. NCBI nr
Match: gi|645220228|ref|XP_008239278.1| (PREDICTED: uncharacterized protein LOC103337883 [Prunus mume])

HSP 1 Score: 172.9 bits (437), Expect = 7.3e-40
Identity = 138/316 (43.67%), Postives = 178/316 (56.33%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MK S KPISSP R D FPPPLM FLR + G+RS+ GR RSSP+F+RKKN  IETQEPSSP
Sbjct: 1   MKLSAKPISSPGRTDKFPPPLMRFLRTNVGSRSR-GRLRSSPMFVRKKNTPIETQEPSSP 60

Query: 61  KVTCMGQVRTNKRSSR-------------PPAKRCRWIRSVLSFNRRHCRTF-------- 120
           KVTCMGQVR  + S++             P  +RC+WI++ L      CR F        
Sbjct: 61  KVTCMGQVRVRRSSNQGASKPLRARRTGVPTLRRCKWIQNALL-----CRHFPGKIKPKS 120

Query: 121 ----WNRSTMFFQ----GKREIRRKSSITESRVRD--EAEDSEQNEESEGAARDEVF-AS 180
               W +   FFQ     K EI+  +   ES+  D  E  D E+ E+ E   + + F +S
Sbjct: 121 FGPVWRKWVPFFQVVFCRKGEIKEDAPKIESKFGDGIEVSDGEEEEDQEYERKAKAFVSS 180

Query: 181 SAPSPPKNALILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEKTEHNNGNGAASK 240
           S+ SPPKNAL+LTRCRSAP+RSS   +R+  S IR++  EEE    + TE  NG G  ++
Sbjct: 181 SSSSPPKNALLLTRCRSAPYRSSSLASRFWGSPIRAEETEEE----QSTETQNG-GNCTE 240

Query: 241 NESQNSER-----MFRKLENSNGEEDR------SSVNNK-------ESKIEENSMSNRSL 267
           NE   SER        KL++ + E+ +      SS+  +       E K E+   S R L
Sbjct: 241 NERPISERESISDQEAKLDSESEEKLKFFMDLESSIRERMAKSASIEDKDEDFGGSARPL 300

[Close]

BLAST of Cp4.1LG10g04800 vs. NCBI nr
Match: gi|731399217|ref|XP_002275200.2| (PREDICTED: uncharacterized protein LOC100249937 [Vitis vinifera])

HSP 1 Score: 167.9 bits (424), Expect = 2.4e-38
Identity = 131/300 (43.67%), Postives = 168/300 (56.00%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MK S K +SSP R + FPPPLM FLR++ G+RS+ GRSRSSP+F+RKKN AIETQEPSSP
Sbjct: 1   MKLSSKTMSSPGRTEKFPPPLMRFLRSNVGSRSR-GRSRSSPMFVRKKNTAIETQEPSSP 60

Query: 61  KVTCMGQVRT--NKRSSRPPAKR-------CRWIRSVLSFNR-------RHCRTFWNRST 120
           KVTC+GQVR   +K+ S    K        CRWIR+ L  N        +  R  W +  
Sbjct: 61  KVTCIGQVRVRRSKQGSGKATKARKKTRGWCRWIRNALCCNHFVGRLKPKPFRPVWRKWV 120

Query: 121 MF----FQGKREIRRKSSITESRVRDEAEDSEQ-----NEESEGAARDEVFASSAPSPPK 180
           +F    F+ K EIR  SS  ES++ D  E+SEQ     NEE E      VF SS+ SPPK
Sbjct: 121 LFFRVRFRRKSEIREDSSRIESKLEDRVEESEQSDDVGNEEEEA----RVFYSSSFSPPK 180

Query: 181 NALILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNSE 240
           NAL+LTRCRSAP+RSS   +R+  S + ++  EE++ E E T+  N    AS+NE  + +
Sbjct: 181 NALLLTRCRSAPYRSSSLASRFWGSPLATE--EEQKTEPENTDQQN---PASENEPSSRD 240

Query: 241 RMFRKLENSNGEEDRSSVNNKESKIEENS--------------MSNRSLILTRCKSEPGR 262
                  +   + D   +N  E    E S               +   LILTRCKSEP R
Sbjct: 241 SAAESRTDPETDRDSEYLNQSEDSTSERSTKPTKTEAFKTGEEATAHPLILTRCKSEPAR 290

[Close]

BLAST of Cp4.1LG10g04800 vs. NCBI nr
Match: gi|147841694|emb|CAN68658.1| (hypothetical protein VITISV_015697 [Vitis vinifera])

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-37
Identity = 130/300 (43.33%), Postives = 166/300 (55.33%), Query Frame = 1


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MK S K +SSP R + FPPPLM FL ++ G+RS+ GRSRSSP+F+RKKN AIETQEPSSP
Sbjct: 425 MKLSSKTMSSPGRTEKFPPPLMRFLXSNVGSRSR-GRSRSSPMFVRKKNTAIETQEPSSP 484

Query: 61  KVTCMGQVRT--NKRSSRPPAKR-------CRWIRSVLSFNR-------RHCRTFWNRST 120
           KVTC+GQVR   +K+ S    K        CRWIR  L  N        +  R  W +  
Sbjct: 485 KVTCIGQVRVRRSKQGSGKATKARKKTRGWCRWIRKALCCNHFVGRLKPKPFRPVWRKWV 544

Query: 121 MF----FQGKREIRRKSSITESRVRDEAEDSEQ-----NEESEGAARDEVFASSAPSPPK 180
           +F    F+ K EIR  SS  ES++ D  E+SEQ     NEE E      VF SS+ SPPK
Sbjct: 545 LFFRVRFRRKSEIREDSSRIESKLEDRVEESEQSDDVGNEEEEA----RVFYSSSFSPPK 604

Query: 181 NALILTRCRSAPHRSSFYGNRYEISSIRSDRAEEEEGEGEKTEHNNGNGAASKNESQNSE 240
           NAL+LTRCRSAP+RSS   +R+  S + ++  EE++ E E T+  N    AS+NE  + +
Sbjct: 605 NALLLTRCRSAPYRSSSLASRFWGSPLATE--EEQKTEPENTDQQN---PASENEPSSRD 664

Query: 241 RMFRKLENSNGEEDRSSVNNKESKIEENS--------------MSNRSLILTRCKSEPGR 262
                  +   + D   +N  E    E S               +   LILTRCKSEP R
Sbjct: 665 SAAESRTDPETDRDSEYLNQSEDSTSERSTKPTKTEAFKTGEEATAHPLILTRCKSEPAR 714

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g04800 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG10g04800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK43_CUCSA	3.3e-79	69.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G439970 PE=4 SV=1	[more]
F6HR04_VITVI	1.6e-38	43.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02260 PE=4 SV=...	[more]
A5C568_VITVI	1.1e-37	43.33	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015697 PE=4 SV=1	[more]
U5G778_POPTR	6.9e-37	43.69	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s13260g PE=4 SV=1	[more]
A0A061ESH6_THECC	2.0e-36	41.99	Uncharacterized protein OS=Theobroma cacao GN=TCM_022109 PE=4 SV=1	[more]

BLAST of Cp4.1LG10g04800 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03110.1	1.2e-24	36.30	FUNCTIONS IN: molecular_function unknown	[more]
AT2G37100.1	7.3e-22	36.09	protamine P1 family protein	[more]

BLAST of Cp4.1LG10g04800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097998\|ref\|XP_008449922.1\|	3.4e-85	71.59	PREDICTED: uncharacterized protein LOC103491651 [Cucumis melo]	[more]
gi\|700192927\|gb\|KGN48131.1\|	4.7e-79	69.00	hypothetical protein Csa_6G439970 [Cucumis sativus]	[more]
gi\|645220228\|ref\|XP_008239278.1\|	7.3e-40	43.67	PREDICTED: uncharacterized protein LOC103337883 [Prunus mume]	[more]
gi\|731399217\|ref\|XP_002275200.2\|	2.4e-38	43.67	PREDICTED: uncharacterized protein LOC100249937 [Vitis vinifera]	[more]
gi\|147841694\|emb\|CAN68658.1\|	1.5e-37	43.33	hypothetical protein VITISV_015697 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g04800.1	Cp4.1LG10g04800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33448	FAMILY NOT NAMED	coord: 1..266 score: 4.5
None	No IPR available	PANTHER	PTHR33448:SF4	ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16-RELATED	coord: 1..266 score: 4.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g04800	Cucsa.124200	Cucumber (Gy14) v1	cgycpeB0314
Cp4.1LG10g04800	Cucsa.307050	Cucumber (Gy14) v1	cgycpeB0798
Cp4.1LG10g04800	CmaCh06G003660	Cucurbita maxima (Rimu)	cmacpeB808
Cp4.1LG10g04800	CmaCh14G001980	Cucurbita maxima (Rimu)	cmacpeB254
Cp4.1LG10g04800	CmaCh03G012520	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g04800	CmoCh03G012500	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g04800	CmoCh14G001900	Cucurbita moschata (Rifu)	cmocpeB218
Cp4.1LG10g04800	CmoCh06G003610	Cucurbita moschata (Rifu)	cmocpeB762
Cp4.1LG10g04800	Cla018273	Watermelon (97103) v1	cpewmB078
Cp4.1LG10g04800	Cla017832	Watermelon (97103) v1	cpewmB065
Cp4.1LG10g04800	Csa3G736940	Cucumber (Chinese Long) v2	cpecuB064
Cp4.1LG10g04800	Csa6G439970	Cucumber (Chinese Long) v2	cpecuB085
Cp4.1LG10g04800	MELO3C014257	Melon (DHL92) v3.5.1	cpemeB057
Cp4.1LG10g04800	MELO3C009326	Melon (DHL92) v3.5.1	cpemeB055
Cp4.1LG10g04800	ClCG10G020450	Watermelon (Charleston Gray)	cpewcgB058
Cp4.1LG10g04800	ClCG04G008860	Watermelon (Charleston Gray)	cpewcgB071
Cp4.1LG10g04800	CSPI06G24190	Wild cucumber (PI 183967)	cpecpiB081
Cp4.1LG10g04800	CSPI03G33060	Wild cucumber (PI 183967)	cpecpiB060
Cp4.1LG10g04800	Lsi03G020410	Bottle gourd (USVL1VR-Ls)	cpelsiB063
Cp4.1LG10g04800	Lsi01G013620	Bottle gourd (USVL1VR-Ls)	cpelsiB054
Cp4.1LG10g04800	MELO3C009326.2	Melon (DHL92) v3.6.1	cpemedB072
Cp4.1LG10g04800	MELO3C014257.2	Melon (DHL92) v3.6.1	cpemedB075
Cp4.1LG10g04800	CsaV3_6G039360	Cucumber (Chinese Long) v3	cpecucB0093
Cp4.1LG10g04800	CsaV3_3G035670	Cucumber (Chinese Long) v3	cpecucB0070
Cp4.1LG10g04800	Bhi03G001294	Wax gourd	cpewgoB0091
Cp4.1LG10g04800	Bhi11G001796	Wax gourd	cpewgoB0067
Cp4.1LG10g04800	CsGy3G030780	Cucumber (Gy14) v2	cgybcpeB291
Cp4.1LG10g04800	Carg03778	Silver-seed gourd	carcpeB0348
Cp4.1LG10g04800	Carg00993	Silver-seed gourd	carcpeB0221
Cp4.1LG10g04800	Carg15283	Silver-seed gourd	carcpeB0772

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG10g04800	Cp4.1LG03g01920	Cucurbita pepo (Zucchini)	cpecpeB092
Cp4.1LG10g04800	Cp4.1LG08g11110	Cucurbita pepo (Zucchini)	cpecpeB107

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g04800	Cucurbita pepo (Zucchini)	cpecpeB075
Cp4.1LG10g04800	Cucurbita pepo (Zucchini)	cpecpeB076
Cp4.1LG10g04800	Cucurbita maxima (Rimu)	cmacpeB866
Cp4.1LG10g04800	Cucurbita moschata (Rifu)	cmocpeB806
Cp4.1LG10g04800	Silver-seed gourd	carcpeB0587
Cp4.1LG10g04800	Silver-seed gourd	carcpeB0959