Carg15283 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15283
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protamine P1 family protein
Location	Cucurbita_argyrosperma_scaffold_085 : 156620 .. 157426 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAATCGGTGAAACCGATTTCCAGTCCCAGTCGGATCGACCTGTTTCCGCCGCCATTGATGAGCTTTCTGAGGGCTGATGCCGGAAATCGGAGTAAAAGCGGCCGGTCTCGCTCCAGTCCGATCTTCATCAGGAAGAAGAACGTCGCCATTGAAACTCAAGAGCCGTCCTCTCCGAAGGTTACTTGTATGGGCCAAGTCCGTACCAATAAACGTTCCTCTAGACCTCCCGCCAAGCGATGCCGATGGATTAGAAGCGTTCTCTCTTTCAATCGACGCCAGTGTAGAACCTTCTGGAACAGGTCGACGATGTTCTTCCAAGGAAATCGTGAAATTAGACGAAAATCATCGATCACTGAATCTCGCGTCCGAGACGAAGCGGAAGATTCGGAGCAAAATGAAGAGAGCGAGGGAGCAGCCAGAGATGAGGTCTTTGCGTCATCGGCTCCATCGCCGCCGAAAAACGCTCTCATCCTGACGAGGTGTAGATCTGCACCTCATCGGTCGTCGTTTTACTGCAATCGGTACGAGATTTCGTCGATTAGGAGCGACAGAACTGAAGAAGAAGAAGGAGAAGGAGAGAAAACAGAGCACAATAATAGAAACGGAGCGGCATCCAAAATTGAGTCCCAAAATTCGGAGCGAATGTTCAGAAAACTCGAAAATTCAAACGGAGAAGAAGATCGAAGCTCTGTAAATAACAAAGAGAGCAAAATCGAGGAAAACTCAATGTCGAATCGGAGCCTGATTCTAACGAGATGCAAATCGGAACCTGGCAGAATTAGGGAGGAACTTTACGGATAA

mRNA sequence

ATGAAGCAATCGGTGAAACCGATTTCCAGTCCCAGTCGGATCGACCTGTTTCCGCCGCCATTGATGAGCTTTCTGAGGGCTGATGCCGGAAATCGGAGTAAAAGCGGCCGGTCTCGCTCCAGTCCGATCTTCATCAGGAAGAAGAACGTCGCCATTGAAACTCAAGAGCCGTCCTCTCCGAAGGTTACTTGTATGGGCCAAGTCCGTACCAATAAACGTTCCTCTAGACCTCCCGCCAAGCGATGCCGATGGATTAGAAGCGTTCTCTCTTTCAATCGACGCCAGTGTAGAACCTTCTGGAACAGGTCGACGATGTTCTTCCAAGGAAATCGTGAAATTAGACGAAAATCATCGATCACTGAATCTCGCGTCCGAGACGAAGCGGAAGATTCGGAGCAAAATGAAGAGAGCGAGGGAGCAGCCAGAGATGAGGTCTTTGCGTCATCGGCTCCATCGCCGCCGAAAAACGCTCTCATCCTGACGAGGTGTAGATCTGCACCTCATCGGTCGTCGTTTTACTGCAATCGGTACGAGATTTCGTCGATTAGGAGCGACAGAACTGAAGAAGAAGAAGGAGAAGGAGAGAAAACAGAGCACAATAATAGAAACGGAGCGGCATCCAAAATTGAGTCCCAAAATTCGGAGCGAATGTTCAGAAAACTCGAAAATTCAAACGGAGAAGAAGATCGAAGCTCTGTAAATAACAAAGAGAGCAAAATCGAGGAAAACTCAATGTCGAATCGGAGCCTGATTCTAACGAGATGCAAATCGGAACCTGGCAGAATTAGGGAGGAACTTTACGGATAA

Coding sequence (CDS)

ATGAAGCAATCGGTGAAACCGATTTCCAGTCCCAGTCGGATCGACCTGTTTCCGCCGCCATTGATGAGCTTTCTGAGGGCTGATGCCGGAAATCGGAGTAAAAGCGGCCGGTCTCGCTCCAGTCCGATCTTCATCAGGAAGAAGAACGTCGCCATTGAAACTCAAGAGCCGTCCTCTCCGAAGGTTACTTGTATGGGCCAAGTCCGTACCAATAAACGTTCCTCTAGACCTCCCGCCAAGCGATGCCGATGGATTAGAAGCGTTCTCTCTTTCAATCGACGCCAGTGTAGAACCTTCTGGAACAGGTCGACGATGTTCTTCCAAGGAAATCGTGAAATTAGACGAAAATCATCGATCACTGAATCTCGCGTCCGAGACGAAGCGGAAGATTCGGAGCAAAATGAAGAGAGCGAGGGAGCAGCCAGAGATGAGGTCTTTGCGTCATCGGCTCCATCGCCGCCGAAAAACGCTCTCATCCTGACGAGGTGTAGATCTGCACCTCATCGGTCGTCGTTTTACTGCAATCGGTACGAGATTTCGTCGATTAGGAGCGACAGAACTGAAGAAGAAGAAGGAGAAGGAGAGAAAACAGAGCACAATAATAGAAACGGAGCGGCATCCAAAATTGAGTCCCAAAATTCGGAGCGAATGTTCAGAAAACTCGAAAATTCAAACGGAGAAGAAGATCGAAGCTCTGTAAATAACAAAGAGAGCAAAATCGAGGAAAACTCAATGTCGAATCGGAGCCTGATTCTAACGAGATGCAAATCGGAACCTGGCAGAATTAGGGAGGAACTTTACGGATAA

Protein sequence

MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSPKVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSITESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYCNRYEISSIRSDRTEEEEGEGEKTEHNNRNGAASKIESQNSERMFRKLENSNGEEDRSSVNNKESKIEENSMSNRSLILTRCKSEPGRIREELYG

Homology

[Close]

BLAST of Carg15283 vs. NCBI nr
Match: XP_022925671.1 (uncharacterized protein LOC111433021 [Cucurbita moschata])

HSP 1 Score: 409.5 bits (1051), Expect = 9.1e-111
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP
Sbjct: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSIT 120
           KVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSIT
Sbjct: 61  KVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSIT 120

Query: 121 ESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYCNRYEIS 180
           ESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYCNRYEIS
Sbjct: 121 ESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYCNRYEIS 180

Query: 181 SIRSDRTEEEEGEGEKTEHNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SIRSDRTEEEEGEGEKTEHNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SIRSDRTEEEEGEGEKTEHNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXLILTRCKSEPGRIREELYG 269
           XXXXXXXXXLILTRCKSEPGRIREELYG
Sbjct: 241 XXXXXXXXXLILTRCKSEPGRIREELYG 268

[Close]

BLAST of Carg15283 vs. NCBI nr
Match: XP_023543942.1 (uncharacterized protein LOC111803666 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.2 bits (944), Expect = 2.3e-98
Identity = 251/268 (93.66%), Postives = 251/268 (93.66%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP
Sbjct: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSIT 120
           KVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRR CRTFWNRSTMFFQG REIRRKSSIT
Sbjct: 61  KVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRRHCRTFWNRSTMFFQGKREIRRKSSIT 120

Query: 121 ESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYCNRYEIS 180
           ESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFY NRYEIS
Sbjct: 121 ESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYGNRYEIS 180

Query: 181 SIRSDRTEEEEGEGEKTEHNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SIRSDR EE            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SIRSDRAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXLILTRCKSEPGRIREELYG 269
           XXXXXXXX LILTRCKSEPGRIREELYG
Sbjct: 241 XXXXXXXXSLILTRCKSEPGRIREELYG 268

[Close]

BLAST of Carg15283 vs. NCBI nr
Match: XP_022977257.1 (uncharacterized protein LOC111477626 [Cucurbita maxima])

HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92
Identity = 244/268 (91.04%), Postives = 246/268 (91.79%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNV IETQEPSSP
Sbjct: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVTIETQEPSSP 60

Query: 61  KVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSIT 120
           KVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRR CRTFWNRSTMFFQG  EIRRKSSIT
Sbjct: 61  KVTCMGQVRTNKRSSRPPAKRCRWIRSVLSFNRRHCRTFWNRSTMFFQGKPEIRRKSSIT 120

Query: 121 ESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNALILTRCRSAPHRSSFYCNRYEIS 180
           ESRVRDEAEDSEQNEESEGAARD VFASSAPSPPKNALILTRCRSAPHRSSFY N     
Sbjct: 121 ESRVRDEAEDSEQNEESEGAARDAVFASSAPSPPKNALILTRCRSAPHRSSFYGN----- 180

Query: 181 SIRSDRTEEEEGEGEKTEHNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            IRSDRT EEEG+G      N   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 LIRSDRT-EEEGKG-----GNGNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXLILTRCKSEPGRIREELYG 269
           XXXXXXXXXLILTRCKSEPGRIRE+LYG
Sbjct: 241 XXXXXXXXXLILTRCKSEPGRIREKLYG 257

[Close]

BLAST of Carg15283 vs. NCBI nr
Match: XP_008449922.1 (PREDICTED: uncharacterized protein LOC103491651 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 3.6e-67
Identity = 168/272 (61.76%), Postives = 179/272 (65.81%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRADAGNRSKS RSRSSPIFIRKKNVAIET+EPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFIRKKNVAIETEEPSSP 60

Query: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSI 120
           KVTCMGQVRTNKRSS + PA RCRWIRSVLSFNRR CRTFWNRS M F+G REIRR   I
Sbjct: 61  KVTCMGQVRTNKRSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLFRGKREIRR---I 120

Query: 121 TESRVRDEAEDSEQNEESEGAA-RDEVFASSA-PSPPKNALILTRCRSAPHRSSFYCNRY 180
           +ESRV +EAEDS           RD V+ASS+ PSPPKNALILTRCRS P+RSSF  NRY
Sbjct: 121 SESRVGNEAEDSXXXXXXXXXRDRDAVYASSSVPSPPKNALILTRCRSTPNRSSFNDNRY 180

Query: 181 EISSIRSD-RTEEEEGEGEKTEHNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
             SSI SD  T EEE + E+   NN                                   
Sbjct: 181 RSSSITSDGSTVEEEEKTERGFGNN--------------TASKIELRNSERLLKKLESSK 240

Query: 241 XXXXXXXXXXXXXLILTRCKSEPGRIREELYG 269
                        LILTRCKSEP RI E+LYG
Sbjct: 241 GDGDCKSVNGNRNLILTRCKSEPARIAEKLYG 255

[Close]

BLAST of Carg15283 vs. NCBI nr
Match: KGN48131.1 (hypothetical protein Csa_6G439970 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 8.6e-61
Identity = 147/201 (73.13%), Postives = 156/201 (77.61%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRADAGNRSKS RSRSSPIF+ KKNVAIETQEPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFVGKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSI 120
           KVTCMGQVRTNK SS + PA RCRWIRSVLSFNRR CRTFWNRS M  +G REIRR   I
Sbjct: 61  KVTCMGQVRTNKHSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLCRGKREIRR---I 120

Query: 121 TESRVRDEAEDSEQNEESEGAA-RDEVFAS-SAPSPPKNALILTRCRSAPHRSSFYCNRY 180
           +ESRV +EAEDS            D V++S S PSPPKNALIL+RCRSAP+RSSF   RY
Sbjct: 121 SESRVGNEAEDSXXXXXXXXXXDGDAVYSSFSVPSPPKNALILSRCRSAPNRSSFNGTRY 180

Query: 181 EISSIRSDRTEEEEGEGEKTE 199
             SSI SD T E E E EKTE
Sbjct: 181 RSSSITSDGTVEVE-EEEKTE 197

[Close]

BLAST of Carg15283 vs. TAIR10
Match: AT5G03110.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-20
Identity = 78/224 (34.82%), Postives = 110/224 (49.11%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADA-------GNRSKSGRSRSSPIFIRK-KNVAI 60
           M  S +P+SSP R++ +PPP M FLR+ +                   P+F+R+ K+ A 
Sbjct: 1   MMISRRPVSSPGRVEKYPPPFMGFLRSKSXXXXXXXXXXXXXXXXXXXPLFVRRNKSAAA 60

Query: 61  ETQEPSSPKVTCMGQVRTNKRSSR--------PPAKRCRWIRSVLSFN----RRQCRTFW 120
             QEPSSPKVTCMGQVR N+   +        P  +RC W+R+   +N    + +  TFW
Sbjct: 61  VAQEPSSPKVTCMGQVRVNRSKPKIKPESRDNPTRRRCEWLRNASFYNKFAGKIKTMTFW 120

Query: 121 N--RSTMFFQGNREIRRKSSITESRVRDEAED-SEQNEESEGAARDEV---FASSAPSPP 180
              R   F    R ++ K S          E   E  EE EG    E+   F S A +PP
Sbjct: 121 PKWRLCSFSCACRNLKEKDSPRSQLDHPTTESVREIKEEIEGEENFEIPKLFVSPATTPP 180

Query: 181 KNALILTRCRSAPHRSSFYCNRYEISSIRSDRTEEEEGEGEKTE 199
            NAL+LTR RSAP+RSS    R+   + + +   ++    EKT+
Sbjct: 181 INALLLTRSRSAPYRSSSLAFRFWEENNQREVESQQNVRSEKTD 224

[Close]

BLAST of Carg15283 vs. TAIR10
Match: AT2G37100.1 (protamine P1 family protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 68/209 (32.54%), Postives = 90/209 (43.06%), Query Frame = 0


Query: 4   SVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKN--VAIETQEPSSPK 63
           S +P+SSP R +  PP LM FLR               PIF R+KN   A ETQEP+SPK
Sbjct: 5   SSRPVSSPGRTE-NPPLLMRFLR--TXXXXXXXXXXXXPIFFRRKNASAAAETQEPTSPK 64

Query: 64  VTCMGQVRTNKRSSRPP---------------AKRCRWIRSVLSFNRRQCRTFWN--RST 123
           VTCMGQVR N+     P               ++RC W++     N   C +F    + T
Sbjct: 65  VTCMGQVRINRSKKPKPETARVSGGATERRRQSRRCGWVK-----NAFPCHSFTGIIKPT 124

Query: 124 MFFQGNREIRRKSSITESRVRDEAEDSEQNEESEGAARDEVF------------------ 176
            F    R+ +  S  + S+  +        E   G +  E                    
Sbjct: 125 CFSPVWRKWKSFSHASFSKKSEXXXXXXXXEPIFGRSTVEXXXXXXXXXXXXXXXXXXXC 184

[Close]

BLAST of Carg15283 vs. TrEMBL
Match: tr|A0A1S3BN59|A0A1S3BN59_CUCME (uncharacterized protein LOC103491651 OS=Cucumis melo OX=3656 GN=LOC103491651 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.4e-67
Identity = 168/272 (61.76%), Postives = 179/272 (65.81%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRADAGNRSKS RSRSSPIFIRKKNVAIET+EPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFIRKKNVAIETEEPSSP 60

Query: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSI 120
           KVTCMGQVRTNKRSS + PA RCRWIRSVLSFNRR CRTFWNRS M F+G REIRR   I
Sbjct: 61  KVTCMGQVRTNKRSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLFRGKREIRR---I 120

Query: 121 TESRVRDEAEDSEQNEESEGAA-RDEVFASSA-PSPPKNALILTRCRSAPHRSSFYCNRY 180
           +ESRV +EAEDS           RD V+ASS+ PSPPKNALILTRCRS P+RSSF  NRY
Sbjct: 121 SESRVGNEAEDSXXXXXXXXXRDRDAVYASSSVPSPPKNALILTRCRSTPNRSSFNDNRY 180

Query: 181 EISSIRSD-RTEEEEGEGEKTEHNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
             SSI SD  T EEE + E+   NN                                   
Sbjct: 181 RSSSITSDGSTVEEEEKTERGFGNN--------------TASKIELRNSERLLKKLESSK 240

Query: 241 XXXXXXXXXXXXXLILTRCKSEPGRIREELYG 269
                        LILTRCKSEP RI E+LYG
Sbjct: 241 GDGDCKSVNGNRNLILTRCKSEPARIAEKLYG 255

[Close]

BLAST of Carg15283 vs. TrEMBL
Match: tr|A0A0A0KK43|A0A0A0KK43_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439970 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.7e-61
Identity = 147/201 (73.13%), Postives = 156/201 (77.61%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MKQ  K ISSPSR DLFPPPLMSFLRADAGNRSKS RSRSSPIF+ KKNVAIETQEPSSP
Sbjct: 1   MKQLSKSISSPSRTDLFPPPLMSFLRADAGNRSKSSRSRSSPIFVGKKNVAIETQEPSSP 60

Query: 61  KVTCMGQVRTNKRSS-RPPAKRCRWIRSVLSFNRRQCRTFWNRSTMFFQGNREIRRKSSI 120
           KVTCMGQVRTNK SS + PA RCRWIRSVLSFNRR CRTFWNRS M  +G REIRR   I
Sbjct: 61  KVTCMGQVRTNKHSSNKTPAVRCRWIRSVLSFNRRHCRTFWNRSAMLCRGKREIRR---I 120

Query: 121 TESRVRDEAEDSEQNEESEGAA-RDEVFAS-SAPSPPKNALILTRCRSAPHRSSFYCNRY 180
           +ESRV +EAEDS            D V++S S PSPPKNALIL+RCRSAP+RSSF   RY
Sbjct: 121 SESRVGNEAEDSXXXXXXXXXXDGDAVYSSFSVPSPPKNALILSRCRSAPNRSSFNGTRY 180

Query: 181 EISSIRSDRTEEEEGEGEKTE 199
             SSI SD T E E E EKTE
Sbjct: 181 RSSSITSDGTVEVE-EEEKTE 197

[Close]

BLAST of Carg15283 vs. TrEMBL
Match: tr|F6HR04|F6HR04_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0040g02260 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 7.0e-35
Identity = 106/218 (48.62%), Postives = 135/218 (61.93%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MK S K +SSP R + FPPPLM FLR++ G+RS+ GRSRSSP+F+RKKN AIETQEPSSP
Sbjct: 149 MKLSSKTMSSPGRTEKFPPPLMRFLRSNVGSRSR-GRSRSSPMFVRKKNTAIETQEPSSP 208

Query: 61  KVTCMGQVRT--NKRSSRPPAKR-------CRWIRSVLSFNR-------RQCRTFWNRST 120
           KVTC+GQVR   +K+ S    K        CRWIR+ L  N        +  R  W +  
Sbjct: 209 KVTCIGQVRVRRSKQGSGKATKARKKTRGWCRWIRNALCCNHFVGRLKPKPFRPVWRKWV 268

Query: 121 MF----FQGNREIRRKSSITESRVRDEAEDSEQ-----NEESEGAARDEVFASSAPSPPK 180
           +F    F+   EIR  SS  ES++ D  E+SEQ     NEE E      VF SS+ SPPK
Sbjct: 269 LFFRVRFRRKSEIREDSSRIESKLEDRVEESEQSDDVGNEEEEA----RVFYSSSFSPPK 328

Query: 181 NALILTRCRSAPHRSSFYCNRYEISSIRSDRTEEEEGE 194
           NAL+LTRCRSAP+RSS   +R+  S + ++  ++ E E
Sbjct: 329 NALLLTRCRSAPYRSSSLASRFWGSPLATEEEQKTEPE 361

[Close]

BLAST of Carg15283 vs. TrEMBL
Match: tr|A5C568|A5C568_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_015697 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.5e-34
Identity = 105/218 (48.17%), Postives = 133/218 (61.01%), Query Frame = 0


Query: 1   MKQSVKPISSPSRIDLFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSSP 60
           MK S K +SSP R + FPPPLM FL ++ G+RS+ GRSRSSP+F+RKKN AIETQEPSSP
Sbjct: 425 MKLSSKTMSSPGRTEKFPPPLMRFLXSNVGSRSR-GRSRSSPMFVRKKNTAIETQEPSSP 484

Query: 61  KVTCMGQVRT--NKRSSRPPAKR-------CRWIRSVLSFNR-------RQCRTFWNRST 120
           KVTC+GQVR   +K+ S    K        CRWIR  L  N        +  R  W +  
Sbjct: 485 KVTCIGQVRVRRSKQGSGKATKARKKTRGWCRWIRKALCCNHFVGRLKPKPFRPVWRKWV 544

Query: 121 MF----FQGNREIRRKSSITESRVRDEAEDSEQ-----NEESEGAARDEVFASSAPSPPK 180
           +F    F+   EIR  SS  ES++ D  E+SEQ     NEE E      VF SS+ SPPK
Sbjct: 545 LFFRVRFRRKSEIREDSSRIESKLEDRVEESEQSDDVGNEEEEA----RVFYSSSFSPPK 604

Query: 181 NALILTRCRSAPHRSSFYCNRYEISSIRSDRTEEEEGE 194
           NAL+LTRCRSAP+RSS   +R+  S + ++  ++ E E
Sbjct: 605 NALLLTRCRSAPYRSSSLASRFWGSPLATEEEQKTEPE 637

[Close]

BLAST of Carg15283 vs. TrEMBL
Match: tr|U5G778|U5G778_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G130500v3 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.5e-34
Identity = 101/213 (47.42%), Postives = 132/213 (61.97%), Query Frame = 0


Query: 1   MKQSVKPISSPSRID-LFPPPLMSFLRADAGNRSKSGRSRSSPIFIRKKNVAIETQEPSS 60
           MK S KPISSP R +  +PPPLM FLR + G+RS+ GRSRSSP+F+RKKN+AIETQEPSS
Sbjct: 1   MKLSAKPISSPGRTEKYYPPPLMRFLRTNVGSRSR-GRSRSSPMFVRKKNIAIETQEPSS 60

Query: 61  PKVTCMGQVR------TNKRSSRPPAKRCRWIRSVL----SFNRRQC-----RTFWNRST 120
           PKVTCMGQVR       N +  +P  +RC+WIR  L     FNRR+      R  W +  
Sbjct: 61  PKVTCMGQVRVRRSKQANTQPGKPKKRRCKWIRKTLLCHHHFNRRRLKLKSFRPSWPKWV 120

Query: 121 MFFQGNREIRRK------SSITESRVRDEAEDSEQNEESEGAARDEVFASSAPSPPKNAL 180
            FF+   E + K      SS  E ++   +ED EQ  E E     +V+ S+  +PP+NAL
Sbjct: 121 HFFRVGIERKNKIVEDCSSSKVEPKIGVRSEDFEQEREEE-EMEPKVYVSTENTPPRNAL 180

Query: 181 ILTRCRSAPHRSSFYCNRYEISSIRSDRTEEEE 192
           +LTRCRSAP+RSS    R+  S   S+ T +++
Sbjct: 181 LLTRCRSAPYRSSSLAGRFWGSPSESEETGQKQ 211

The following BLAST results are available for this feature:

BLAST of Carg15283 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925671.1	9.1e-111	100.00	uncharacterized protein LOC111433021 [Cucurbita moschata]	[more]
XP_023543942.1	2.3e-98	93.66	uncharacterized protein LOC111803666 [Cucurbita pepo subsp. pepo]	[more]
XP_022977257.1	2.5e-92	91.04	uncharacterized protein LOC111477626 [Cucurbita maxima]	[more]
XP_008449922.1	3.6e-67	61.76	PREDICTED: uncharacterized protein LOC103491651 [Cucumis melo]	[more]
KGN48131.1	8.6e-61	73.13	hypothetical protein Csa_6G439970 [Cucumis sativus]	[more]

BLAST of Carg15283 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03110.1	3.1e-20	34.82	FUNCTIONS IN: molecular_function unknown	[more]
AT2G37100.1	2.6e-11	32.54	protamine P1 family protein	[more]

BLAST of Carg15283 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15283 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BN59\|A0A1S3BN59_CUCME	2.4e-67	61.76	uncharacterized protein LOC103491651 OS=Cucumis melo OX=3656 GN=LOC103491651 PE=...	[more]
tr\|A0A0A0KK43\|A0A0A0KK43_CUCSA	5.7e-61	73.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439970 PE=4 SV=1	[more]
tr\|F6HR04\|F6HR04_VITVI	7.0e-35	48.62	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0040g02260 PE=4 SV=...	[more]
tr\|A5C568\|A5C568_VITVI	4.5e-34	48.17	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_015697 PE=4 SV=1	[more]
tr\|U5G778\|U5G778_POPTR	4.5e-34	47.42	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G130500v3 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15283-RA	Carg15283-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..243
None	No IPR available	PANTHER	PTHR33448:SF4	ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16-RELATED	coord: 1..265
None	No IPR available	PANTHER	PTHR33448	FAMILY NOT NAMED	coord: 1..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15283	Cla018273	Watermelon (97103) v1	carwmB0546
Carg15283	Cla017832	Watermelon (97103) v1	carwmB0543
Carg15283	Csa3G736940	Cucumber (Chinese Long) v2	carcuB0577
Carg15283	Csa6G439970	Cucumber (Chinese Long) v2	carcuB0579
Carg15283	MELO3C014257	Melon (DHL92) v3.5.1	carmeB0553
Carg15283	MELO3C009326	Melon (DHL92) v3.5.1	carmeB0552
Carg15283	ClCG04G008860	Watermelon (Charleston Gray)	carwcgB0533
Carg15283	ClCG10G020450	Watermelon (Charleston Gray)	carwcgB0530
Carg15283	CSPI03G33060	Wild cucumber (PI 183967)	carcpiB0583
Carg15283	CSPI06G24190	Wild cucumber (PI 183967)	carcpiB0585
Carg15283	Cucsa.124200	Cucumber (Gy14) v1	carcgyB0624
Carg15283	Cucsa.307050	Cucumber (Gy14) v1	carcgyB0627
Carg15283	CmaCh03G012520	Cucurbita maxima (Rimu)	carcmaB0763
Carg15283	CmaCh06G003660	Cucurbita maxima (Rimu)	carcmaB0764
Carg15283	CmoCh06G003610	Cucurbita moschata (Rifu)	carcmoB0743
Carg15283	CmoCh03G012500	Cucurbita moschata (Rifu)	carcmoB0742
Carg15283	CmoCh14G001900	Cucurbita moschata (Rifu)	carcmoB0740
Carg15283	Lsi01G013620	Bottle gourd (USVL1VR-Ls)	carlsiB495
Carg15283	Lsi03G020410	Bottle gourd (USVL1VR-Ls)	carlsiB498
Carg15283	Cp4.1LG10g04800	Cucurbita pepo (Zucchini)	carcpeB0772
Carg15283	Cp4.1LG08g11110	Cucurbita pepo (Zucchini)	carcpeB0778
Carg15283	Cp4.1LG03g01920	Cucurbita pepo (Zucchini)	carcpeB0777
Carg15283	CsGy3G030780	Cucumber (Gy14) v2	carcgybB0553
Carg15283	MELO3C014257.2	Melon (DHL92) v3.6.1	carmedB0559
Carg15283	MELO3C009326.2	Melon (DHL92) v3.6.1	carmedB0558
Carg15283	CsaV3_3G035670	Cucumber (Chinese Long) v3	carcucB0584
Carg15283	CsaV3_6G039360	Cucumber (Chinese Long) v3	carcucB0586
Carg15283	Cla97C10G203620	Watermelon (97103) v2	carwmbB0572
Carg15283	Cla97C04G075540	Watermelon (97103) v2	carwmbB0574
Carg15283	Bhi03G001294	Wax gourd	carwgoB0658

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15283	Carg00993	Silver-seed gourd	carcarB194

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15283	Silver-seed gourd	carcarB436
Carg15283	Cucurbita maxima (Rimu)	carcmaB0765
Carg15283	Cucurbita moschata (Rifu)	carcmoB0744
Carg15283	Cucurbita pepo (Zucchini)	carcpeB0774