Cp4.1LG09g11670 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g11670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Wiskott-Aldrich syndrome protein family member 2
Location	Cp4.1LG09 : 9910195 .. 9911340 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGCGTGGATAATCCAATATCCAAATCTGAAAACTAATCCAACTAGCTCCATTCATTCCCATGGTACGGGCCTCCGGCAAAAACGAAATTCCTCAAAGAATTCTCCCATTTGGCTCTATCCATCACCATTCTTCGCACTCCGTTAGAGACTCGCAGTTATGGAGATCGCATCATTAACCAGCAGCAACAGAGCGGCTTCATTCATCTACTCTTATCCACCCAAAACGAAGTCAAAAAATCAAAATCCTTCTACCTTCTCGCCTCTCCATGTACACGCCATGGCCGCCGAGAAACCTCCCTCTTCTGCTCTCAAAACCCTCGGCTCCAAGAAGGTCAATTTCTTTTTCAACTTATTGTCAATTCGTATTCAATTCTGGTAAAGCCAACACTGAAGACCCAAATTCTGCAGATAAACTCCACGGTGTTCCCTCTCGGTGAGAAAGGGCCGAGGAGCAGCATCTCGCTTTCGACATCGCCGCCGATTAAGCTACTGACAAGAGTGGAGCAATTGAGGCTCCTGAGCAAAGCGGAGAAGGCCGGGCTGCTGTCTGCGGCGGAGAAGGCTGGGTTATCTCTATCGTCGATTGAGAAATTAGGACTTCTGTCCAAGGCTGAGGAGCTGGGGATCTTATCGGCGGCGACGGATCCGGGAACTCCCGGGGCGCTGCTGAGCCTGAGCTTAGGGCTGTTGCTTTTAGGGCCTTCGTGTGTGTATTTGGTGCCGGAGGACAGTGTTTGGGAAATTGTGTTGCAGGCTGCGGCAGCTCTGGTCTCCGTCGTAGGCGGCTCCGCGGCTTTTGCTGCGTCGAATTTGGTGTCCAATTTGCAGAGATCGAATTGAATTCCGGTGTTGGAGTTTCCCGGCCAATGGAACTGTAGGCAGTATCATGTTTCCTTATCTCACGTCGTCGTTTGTAATCTGCAATTATTGAATTTCATCATTTTCCATCGGATTAAAATGGCGATATGTTATCGGAAATATTGCTGTCTCAAATTTACATCAAATTCGATATGAAGAAAACAAAAACACACACATACAAATCTATACTATATTCGGACTTAGAACGATCAAGAATAAATATATGCATTTGTTCAAAATTAAATAAAGAAAAACATAGAGATTACCACTAATTTCTCTCAATCTC

mRNA sequence

TACGCGTGGATAATCCAATATCCAAATCTGAAAACTAATCCAACTAGCTCCATTCATTCCCATGGTACGGGCCTCCGGCAAAAACGAAATTCCTCAAAGAATTCTCCCATTTGGCTCTATCCATCACCATTCTTCGCACTCCGTTAGAGACTCGCAGTTATGGAGATCGCATCATTAACCAGCAGCAACAGAGCGGCTTCATTCATCTACTCTTATCCACCCAAAACGAAGTCAAAAAATCAAAATCCTTCTACCTTCTCGCCTCTCCATGTACACGCCATGGCCGCCGAGAAACCTCCCTCTTCTGCTCTCAAAACCCTCGGCTCCAAGAAGATAAACTCCACGGTGTTCCCTCTCGGTGAGAAAGGGCCGAGGAGCAGCATCTCGCTTTCGACATCGCCGCCGATTAAGCTACTGACAAGAGTGGAGCAATTGAGGCTCCTGAGCAAAGCGGAGAAGGCCGGGCTGCTGTCTGCGGCGGAGAAGGCTGGGTTATCTCTATCGTCGATTGAGAAATTAGGACTTCTGTCCAAGGCTGAGGAGCTGGGGATCTTATCGGCGGCGACGGATCCGGGAACTCCCGGGGCGCTGCTGAGCCTGAGCTTAGGGCTGTTGCTTTTAGGGCCTTCGTGTGTGTATTTGGTGCCGGAGGACAGTGTTTGGGAAATTGTGTTGCAGGCTGCGGCAGCTCTGGTCTCCGTCGTAGGCGGCTCCGCGGCTTTTGCTGCGTCGAATTTGGTGTCCAATTTGCAGAGATCGAATTGAATTCCGGTGTTGGAGTTTCCCGGCCAATGGAACTGTAGGCAGTATCATGTTTCCTTATCTCACGTCGTCGTTTGTAATCTGCAATTATTGAATTTCATCATTTTCCATCGGATTAAAATGGCGATATGTTATCGGAAATATTGCTGTCTCAAATTTACATCAAATTCGATATGAAGAAAACAAAAACACACACATACAAATCTATACTATATTCGGACTTAGAACGATCAAGAATAAATATATGCATTTGTTCAAAATTAAATAAAGAAAAACATAGAGATTACCACTAATTTCTCTCAATCTC

Coding sequence (CDS)

ATGGAGATCGCATCATTAACCAGCAGCAACAGAGCGGCTTCATTCATCTACTCTTATCCACCCAAAACGAAGTCAAAAAATCAAAATCCTTCTACCTTCTCGCCTCTCCATGTACACGCCATGGCCGCCGAGAAACCTCCCTCTTCTGCTCTCAAAACCCTCGGCTCCAAGAAGATAAACTCCACGGTGTTCCCTCTCGGTGAGAAAGGGCCGAGGAGCAGCATCTCGCTTTCGACATCGCCGCCGATTAAGCTACTGACAAGAGTGGAGCAATTGAGGCTCCTGAGCAAAGCGGAGAAGGCCGGGCTGCTGTCTGCGGCGGAGAAGGCTGGGTTATCTCTATCGTCGATTGAGAAATTAGGACTTCTGTCCAAGGCTGAGGAGCTGGGGATCTTATCGGCGGCGACGGATCCGGGAACTCCCGGGGCGCTGCTGAGCCTGAGCTTAGGGCTGTTGCTTTTAGGGCCTTCGTGTGTGTATTTGGTGCCGGAGGACAGTGTTTGGGAAATTGTGTTGCAGGCTGCGGCAGCTCTGGTCTCCGTCGTAGGCGGCTCCGCGGCTTTTGCTGCGTCGAATTTGGTGTCCAATTTGCAGAGATCGAATTGA

Protein sequence

MEIASLTSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALVSVVGGSAAFAASNLVSNLQRSN

Homology

[Close]

BLAST of Cp4.1LG09g11670 vs. TrEMBL
Match: A0A0A0LQ98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039250 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-78
Identity = 171/202 (84.65%), Postives = 182/202 (90.10%), Query Frame = 1


Query: 1   MEIASL-TSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSKKI 60
           ME+ S  +SS RAASFIYSYP  T S+ +      PLH+H+MA EKP  SA KT+GSKKI
Sbjct: 1   MEVTSFCSSSTRAASFIYSYPSTTTSRRKR-----PLHLHSMATEKPLPSAAKTVGSKKI 60

Query: 61  NSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEK 120
           N+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQL+LLSKAEKAGLLSAAEKAGLSLSSIEK
Sbjct: 61  NTTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEK 120

Query: 121 LGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALV 180
           LGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQ A ALV
Sbjct: 121 LGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALV 180

Query: 181 SVVGGSAAFAASNLVSNLQRSN 202
           S+VGGSAAFAASNLVSNLQRSN
Sbjct: 181 SIVGGSAAFAASNLVSNLQRSN 197

[Close]

BLAST of Cp4.1LG09g11670 vs. TrEMBL
Match: B9RLM5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1469500 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-60
Identity = 147/200 (73.50%), Postives = 163/200 (81.50%), Query Frame = 1


Query: 1   MEIASLTSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSKKIN 60
           ME A+++ S R   F+YS P   ++          L   +MAA+KP  SA KT+ S+K N
Sbjct: 1   MEAAAISGS-RGICFLYSSPNGKRT----------LLNRSMAAQKPVPSAAKTVSSRK-N 60

Query: 61  STVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEKL 120
           STVFPLGEKGPR+S  L TSPPIKLLTRVE+L+LLSKAEKAGLLSAAEK GLSLS+IEKL
Sbjct: 61  STVFPLGEKGPRNS-PLVTSPPIKLLTRVEELKLLSKAEKAGLLSAAEKFGLSLSTIEKL 120

Query: 121 GLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALVS 180
           GLLSKAEELG+LSAATDPGTPGAL SLSLGLLLLGPSCVYLVPED  WEIVLQ A ALVS
Sbjct: 121 GLLSKAEELGVLSAATDPGTPGALFSLSLGLLLLGPSCVYLVPEDYPWEIVLQVAVALVS 180

Query: 181 VVGGSAAFAASNLVSNLQRS 201
           VVGGSAAFAASNLVSNLQ+S
Sbjct: 181 VVGGSAAFAASNLVSNLQKS 187

[Close]

BLAST of Cp4.1LG09g11670 vs. TrEMBL
Match: V4TVQ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022373mg PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.7e-60
Identity = 143/201 (71.14%), Postives = 162/201 (80.60%), Query Frame = 1


Query: 1   MEIASLTSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSKKIN 60
           ME A+    +R    I+  PP + SK    + FS L V +MA +KP  SA KT+GS+K N
Sbjct: 1   MEAAAFYGGSRGIRCIH--PPSSSSKR---NAFSSLLVQSMATQKPLPSAAKTVGSRK-N 60

Query: 61  STVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEKL 120
           S VFPLGE GPR++  L+TSPP+KLLTRVEQL+LLSKAEKAGLLSAAEK GLSLSSIEKL
Sbjct: 61  SVVFPLGEPGPRNA-PLATSPPVKLLTRVEQLKLLSKAEKAGLLSAAEKFGLSLSSIEKL 120

Query: 121 GLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALVS 180
           GLLSKAEE G+LSAATDP TPGALL+LSLGLLLLGPSCVYLVPED  WE+ LQ   ALVS
Sbjct: 121 GLLSKAEEFGVLSAATDPATPGALLTLSLGLLLLGPSCVYLVPEDYPWEVALQGVVALVS 180

Query: 181 VVGGSAAFAASNLVSNLQRSN 202
           VVGGSAAFAASNLVSNLQ+S+
Sbjct: 181 VVGGSAAFAASNLVSNLQKSS 194

[Close]

BLAST of Cp4.1LG09g11670 vs. TrEMBL
Match: A0A067FHY6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028863mg PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.7e-60
Identity = 143/201 (71.14%), Postives = 162/201 (80.60%), Query Frame = 1


Query: 1   MEIASLTSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSKKIN 60
           ME A+    +R    I+  PP + SK    + FS L V +MA +KP  SA KT+GS+K N
Sbjct: 1   MEAAAFYGGSRGIPCIH--PPSSSSKR---NAFSSLLVQSMATQKPLPSAAKTVGSRK-N 60

Query: 61  STVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEKL 120
           S VFPLGE GPR++  L+TSPP+KLLTRVEQL+LLSKAEKAGLLSAAEK GLSLSSIEKL
Sbjct: 61  SVVFPLGEPGPRNA-PLATSPPVKLLTRVEQLKLLSKAEKAGLLSAAEKFGLSLSSIEKL 120

Query: 121 GLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALVS 180
           GLLSKAEE G+LSAATDP TPGALL+LSLGLLLLGPSCVYLVPED  WE+ LQ   ALVS
Sbjct: 121 GLLSKAEEFGVLSAATDPATPGALLTLSLGLLLLGPSCVYLVPEDYPWEVALQGVVALVS 180

Query: 181 VVGGSAAFAASNLVSNLQRSN 202
           VVGGSAAFAASNLVSNLQ+S+
Sbjct: 181 VVGGSAAFAASNLVSNLQKSS 194

[Close]

BLAST of Cp4.1LG09g11670 vs. TrEMBL
Match: A0A067K8M1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11734 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58
Identity = 133/162 (82.10%), Postives = 146/162 (90.12%), Query Frame = 1


Query: 41  MAAEKP-PSSALKTLGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAE 100
           MA  KP PSSA KT+ S+K NSTVFPLGEKGPR  + L+TSPP+KLLTRVEQL+LLSKAE
Sbjct: 1   MATPKPLPSSASKTVSSRK-NSTVFPLGEKGPRKEL-LATSPPVKLLTRVEQLKLLSKAE 60

Query: 101 KAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCV 160
           KAGLLSAAEK GLSLS+IEKLGLLSKAEELG+LSAATDPGTPGAL SLSLG+L LGPSCV
Sbjct: 61  KAGLLSAAEKFGLSLSTIEKLGLLSKAEELGVLSAATDPGTPGALFSLSLGILFLGPSCV 120

Query: 161 YLVPEDSVWEIVLQAAAALVSVVGGSAAFAASNLVSNLQRSN 202
           Y +PEDS+WEIVLQ A AL+SVVGGSAAFAASN VSNLQ+SN
Sbjct: 121 YFLPEDSIWEIVLQIAVALLSVVGGSAAFAASNFVSNLQKSN 160

[Close]

BLAST of Cp4.1LG09g11670 vs. TAIR10
Match: AT5G08050.1 (AT5G08050.1 Protein of unknown function (DUF1118))

HSP 1 Score: 172.2 bits (435), Expect = 3.3e-43
Identity = 103/169 (60.95%), Postives = 126/169 (74.56%), Query Frame = 1


Query: 34  SPLHVHAMAAEKP-PSSALKTLGSKKINSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQL 93
           S L VH+MA +KP PS+A +T+ SKK  +T                  P +KLLTRVEQL
Sbjct: 8   SSLTVHSMANKKPSPSAATRTITSKKSTAT------------------PQVKLLTRVEQL 67

Query: 94  RLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATDPGTPGALLSLSLGLL 153
           +LL+KAEKAGLLS AEK+G SLS+IE+LGLL+KAEE G+LSAAT+P TPG L +LSLGLL
Sbjct: 68  KLLTKAEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLL 127

Query: 154 LLGPSCVYLVPEDSVWEIVLQAAAALVSVVGGSAAFAASNLVSNLQRSN 202
           LLGP   Y+VPED  WE+V+Q   AL+SV+GGSAAFAAS  VSNLQ+S+
Sbjct: 128 LLGPVFAYVVPEDYTWEVVIQVLVALLSVLGGSAAFAASGFVSNLQKSD 158

[Close]

BLAST of Cp4.1LG09g11670 vs. TAIR10
Match: AT1G74730.1 (AT1G74730.1 Protein of unknown function (DUF1118))

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-10
Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = 1


Query: 83  IKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLSKAEELGILSAATD-PGT- 142
           + +  ++E+ ++LS  EK+GLLS AE  GL+LSS+EKL + SKAE+LG+LS   +  GT 
Sbjct: 78  VDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFSKAEDLGLLSLLENLAGTS 137

Query: 143 PGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALVSVVGGSAAFAASNLVSNLQRS 202
           P  L S +L  L      V L+P+DS   +V QA  A    + G      S ++  LQ +
Sbjct: 138 PAVLASAALPALTAAIVAVVLIPDDSTTLVVAQAVLAGALALTGVVLLVGSVVLDGLQEA 197

[Close]

BLAST of Cp4.1LG09g11670 vs. NCBI nr
Match: gi|659066578|ref|XP_008451074.1| (PREDICTED: uncharacterized protein LOC103492437 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 5.4e-80
Identity = 173/202 (85.64%), Postives = 184/202 (91.09%), Query Frame = 1


Query: 1   MEIASL-TSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSKKI 60
           ME+ S  +SS RAASFIYSYP  T S+ +      PLH+H+MAAEKPP SA KT+GSKKI
Sbjct: 1   MEVTSFCSSSTRAASFIYSYPSTTTSRRKR-----PLHLHSMAAEKPPPSASKTVGSKKI 60

Query: 61  NSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEK 120
           N+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQL+LLSKAEKAGLLSAAEKAGLSLSSIEK
Sbjct: 61  NTTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEK 120

Query: 121 LGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALV 180
           LGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQ A ALV
Sbjct: 121 LGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALV 180

Query: 181 SVVGGSAAFAASNLVSNLQRSN 202
           S+VGGSAAFAASNLVSNLQRSN
Sbjct: 181 SIVGGSAAFAASNLVSNLQRSN 197

[Close]

BLAST of Cp4.1LG09g11670 vs. NCBI nr
Match: gi|449439329|ref|XP_004137438.1| (PREDICTED: uncharacterized protein LOC101204037 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 1.8e-78
Identity = 171/202 (84.65%), Postives = 182/202 (90.10%), Query Frame = 1


Query: 1   MEIASL-TSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSKKI 60
           ME+ S  +SS RAASFIYSYP  T S+ +      PLH+H+MA EKP  SA KT+GSKKI
Sbjct: 1   MEVTSFCSSSTRAASFIYSYPSTTTSRRKR-----PLHLHSMATEKPLPSAAKTVGSKKI 60

Query: 61  NSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEK 120
           N+TVFPLGEKGPRSSISLSTSPPIKLLTRVEQL+LLSKAEKAGLLSAAEKAGLSLSSIEK
Sbjct: 61  NTTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEK 120

Query: 121 LGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALV 180
           LGLLSKAEELG+LSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQ A ALV
Sbjct: 121 LGLLSKAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALV 180

Query: 181 SVVGGSAAFAASNLVSNLQRSN 202
           S+VGGSAAFAASNLVSNLQRSN
Sbjct: 181 SIVGGSAAFAASNLVSNLQRSN 197

[Close]

BLAST of Cp4.1LG09g11670 vs. NCBI nr
Match: gi|802653518|ref|XP_012080393.1| (PREDICTED: uncharacterized protein LOC105640637 [Jatropha curcas])

HSP 1 Score: 252.3 bits (643), Expect = 7.1e-64
Identity = 145/203 (71.43%), Postives = 172/203 (84.73%), Query Frame = 1


Query: 1   MEIASLTSSNRAASFIYSYPPKTK-SKNQNPSTFSPLHVHAMAAEKP-PSSALKTLGSKK 60
           +E  ++++S+R   ++YSY  + K S  +N  ++SPL + +MA  KP PSSA KT+ S+K
Sbjct: 2   IESTAISASSRVIPYLYSYSNRMKPSITENSPSYSPLLIKSMATPKPLPSSASKTVSSRK 61

Query: 61  INSTVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIE 120
            NSTVFPLGEKGPR  + L+TSPP+KLLTRVEQL+LLSKAEKAGLLSAAEK GLSLS+IE
Sbjct: 62  -NSTVFPLGEKGPRKEL-LATSPPVKLLTRVEQLKLLSKAEKAGLLSAAEKFGLSLSTIE 121

Query: 121 KLGLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAAL 180
           KLGLLSKAEELG+LSAATDPGTPGAL SLSLG+L LGPSCVY +PEDS+WEIVLQ A AL
Sbjct: 122 KLGLLSKAEELGVLSAATDPGTPGALFSLSLGILFLGPSCVYFLPEDSIWEIVLQIAVAL 181

Query: 181 VSVVGGSAAFAASNLVSNLQRSN 202
           +SVVGGSAAFAASN VSNLQ+SN
Sbjct: 182 LSVVGGSAAFAASNFVSNLQKSN 202

[Close]

BLAST of Cp4.1LG09g11670 vs. NCBI nr
Match: gi|568847723|ref|XP_006477681.1| (PREDICTED: uncharacterized protein LOC102627842 [Citrus sinensis])

HSP 1 Score: 240.7 bits (613), Expect = 2.2e-60
Identity = 144/201 (71.64%), Postives = 163/201 (81.09%), Query Frame = 1


Query: 1   MEIASLTSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSKKIN 60
           ME A+    +R    I+  PP + SK    + FS L V +MA +KP  SA KT+GS+K N
Sbjct: 1   MEAAAFYGGSRGIPCIH--PPSSSSKR---NAFSSLLVQSMATQKPLPSAAKTVGSRK-N 60

Query: 61  STVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEKL 120
           S VFPLGE GPR++ +L+TSPP+KLLTRVEQL+LLSKAEKAGLLSAAEK GLSLSSIEKL
Sbjct: 61  SVVFPLGEPGPRNA-ALATSPPVKLLTRVEQLKLLSKAEKAGLLSAAEKFGLSLSSIEKL 120

Query: 121 GLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALVS 180
           GLLSKAEE G+LSAATDP TPGALL+LSLGLLLLGPSCVYLVPED  WE+ LQ   ALVS
Sbjct: 121 GLLSKAEEFGVLSAATDPATPGALLTLSLGLLLLGPSCVYLVPEDYPWEVALQGVVALVS 180

Query: 181 VVGGSAAFAASNLVSNLQRSN 202
           VVGGSAAFAASNLVSNLQ+SN
Sbjct: 181 VVGGSAAFAASNLVSNLQKSN 194

[Close]

BLAST of Cp4.1LG09g11670 vs. NCBI nr
Match: gi|255547173|ref|XP_002514644.1| (PREDICTED: uncharacterized protein LOC8284419 [Ricinus communis])

HSP 1 Score: 239.2 bits (609), Expect = 6.3e-60
Identity = 147/200 (73.50%), Postives = 163/200 (81.50%), Query Frame = 1


Query: 1   MEIASLTSSNRAASFIYSYPPKTKSKNQNPSTFSPLHVHAMAAEKPPSSALKTLGSKKIN 60
           ME A+++ S R   F+YS P   ++          L   +MAA+KP  SA KT+ S+K N
Sbjct: 1   MEAAAISGS-RGICFLYSSPNGKRT----------LLNRSMAAQKPVPSAAKTVSSRK-N 60

Query: 61  STVFPLGEKGPRSSISLSTSPPIKLLTRVEQLRLLSKAEKAGLLSAAEKAGLSLSSIEKL 120
           STVFPLGEKGPR+S  L TSPPIKLLTRVE+L+LLSKAEKAGLLSAAEK GLSLS+IEKL
Sbjct: 61  STVFPLGEKGPRNS-PLVTSPPIKLLTRVEELKLLSKAEKAGLLSAAEKFGLSLSTIEKL 120

Query: 121 GLLSKAEELGILSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQAAAALVS 180
           GLLSKAEELG+LSAATDPGTPGAL SLSLGLLLLGPSCVYLVPED  WEIVLQ A ALVS
Sbjct: 121 GLLSKAEELGVLSAATDPGTPGALFSLSLGLLLLGPSCVYLVPEDYPWEIVLQVAVALVS 180

Query: 181 VVGGSAAFAASNLVSNLQRS 201
           VVGGSAAFAASNLVSNLQ+S
Sbjct: 181 VVGGSAAFAASNLVSNLQKS 187

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g11670 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g11670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ98_CUCSA	1.2e-78	84.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039250 PE=4 SV=1	[more]
B9RLM5_RICCO	4.4e-60	73.50	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1469500 PE=4 SV=1	[more]
V4TVQ8_9ROSI	9.7e-60	71.14	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022373mg PE=4 SV=1	[more]
A0A067FHY6_CITSI	9.7e-60	71.14	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028863mg PE=4 SV=1	[more]
A0A067K8M1_JATCU	2.4e-58	82.10	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11734 PE=4 SV=1	[more]

BLAST of Cp4.1LG09g11670 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08050.1	3.3e-43	60.95	Protein of unknown function (DUF1118)	[more]
AT1G74730.1	3.7e-10	38.84	Protein of unknown function (DUF1118)	[more]

BLAST of Cp4.1LG09g11670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066578\|ref\|XP_008451074.1\|	5.4e-80	85.64	PREDICTED: uncharacterized protein LOC103492437 [Cucumis melo]	[more]
gi\|449439329\|ref\|XP_004137438.1\|	1.8e-78	84.65	PREDICTED: uncharacterized protein LOC101204037 [Cucumis sativus]	[more]
gi\|802653518\|ref\|XP_012080393.1\|	7.1e-64	71.43	PREDICTED: uncharacterized protein LOC105640637 [Jatropha curcas]	[more]
gi\|568847723\|ref\|XP_006477681.1\|	2.2e-60	71.64	PREDICTED: uncharacterized protein LOC102627842 [Citrus sinensis]	[more]
gi\|255547173\|ref\|XP_002514644.1\|	6.3e-60	73.50	PREDICTED: uncharacterized protein LOC8284419 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009500	DUF1118

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0090391	granum assembly
biological_process	GO:0010196	nonphotochemical quenching
biological_process	GO:0080167	response to karrikin
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009515	granal stacked thylakoid
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g11670.1	Cp4.1LG09g11670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009500	Protein of unknown function DUF1118	PFAM	PF06549	DUF1118	coord: 88..200 score: 3.4
None	No IPR available	PANTHER	PTHR31425	FAMILY NOT NAMED	coord: 11..201 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g11670	Cucsa.113280	Cucumber (Gy14) v1	cgycpeB0251
Cp4.1LG09g11670	CmaCh18G000010	Cucurbita maxima (Rimu)	cmacpeB416
Cp4.1LG09g11670	CmoCh18G000010	Cucurbita moschata (Rifu)	cmocpeB377
Cp4.1LG09g11670	CmoCh13G011160	Cucurbita moschata (Rifu)	cmocpeB183
Cp4.1LG09g11670	Cla018557	Watermelon (97103) v1	cpewmB049
Cp4.1LG09g11670	Csa1G039250	Cucumber (Chinese Long) v2	cpecuB027
Cp4.1LG09g11670	MELO3C002036	Melon (DHL92) v3.5.1	cpemeB026
Cp4.1LG09g11670	ClCG04G011740	Watermelon (Charleston Gray)	cpewcgB038
Cp4.1LG09g11670	CSPI01G06190	Wild cucumber (PI 183967)	cpecpiB024
Cp4.1LG09g11670	Lsi02G001220	Bottle gourd (USVL1VR-Ls)	cpelsiB026
Cp4.1LG09g11670	MELO3C002036.2	Melon (DHL92) v3.6.1	cpemedB031
Cp4.1LG09g11670	CsaV3_1G006050	Cucumber (Chinese Long) v3	cpecucB0031
Cp4.1LG09g11670	CsGy1G005900	Cucumber (Gy14) v2	cgybcpeB018

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g11670	Cucumber (Gy14) v2	cgybcpeB016
Cp4.1LG09g11670	Cucumber (Chinese Long) v3	cpecucB0030