Cp4.1LG09g10220 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g10220
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGlutaredoxin
LocationCp4.1LG09 : 8994341 .. 8996163 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCGTGGTTCAGCTCAAACAAATTCAGTAAAGAAGAGCAGAATCAGTCGCTTAACGAGGCCAAGAAGATAATCTCCTCTAATCCCGTTGTTGTTTTCAGGTTCTTTCAATAATTTTTCAACGCTCCCCTCGCTCCTTCTAGGTTTTGATTTGATCTTCCTCGTATGAATTTCTTATTGATTCTCGCCTCCATTTACTTTTTATCACTATGTTCGATCCTGTGATAATCAATTACGTGCAAAATGTTCAATGGTTAACTCTTATTGTTAAGAAAATTGGCTCGATTGTTATCGATAAGTGAAGATTGAAGAGTTGTTTTGGAAGTTTTGGAAGTTTTGGAAGTTTGTTCTTGTTATGATTCAATAAATCTCTGTTTCGCATGGCAGCAAGACTTACTGTGGGTATTGCTCGAGAGTCAAGGAGTTGCTCACACAGCTTGGAGCTAGTCATAAGGTCATTGAATTGGACCAAAAAAGTAAGAATAATTTGCGTCTGAGATTCTGCTATAATTTTCCATGCTTTTTCATCTATAAATGTTTGTTCTAGGGCGTTCTTTGATCATGACATGATCTTGTTTATCTTGAATTAGCTGAAAATTGAGATAGAATGATGCTATTTTCCTTCTGTTTCTTCTGTAGTGACTGCATAACTGATTGTGACTTATGAACTCATTGTTGACTGATGAGACTGAAAATTTAAAAGGAGAGTTAATTGCTAGTAATACACTTCAACTTCATTTTCCATGAATAGTTGATCCTTTTATGGTGTTTTTGAGTTCATGTTGCTTGAAGTCAGCACCCTGTTTGTTCATTGGTTTGAGTAAAATAATTGTAAGAGATATTGTCCTGTTTGGATTTTCCTTTCGGGCTTCCCCTCAAGGTTTTAAAACGCATTTGTTAGAGAGAGGTTTCTACACCCTTATAAAGAATGTTTTGTTCTTCGTTATGCTCTCCAACTGATGTGGAACCTCATAATCCACCCCCCTTCGGGGCCAGCATCCTCGCTAGCACTCGTTCCCCTCTCCGATCAATGTGGTACTCACAATCCACCCCCCTTCGAGGCCCAGCGTCCTCGCTGGCAATCGTTTCCTCTCCAATCGATGTCGTTCCCCTCTCCAATCAATGTGAGATCTCACAATCCACTTTCCTCTGGGCCCAGCGTCTTTGCTGACACTCGTTCTCCTGTCTATGATGTCGTTTCTCTCTCCAATCAATGTGGAATTTCACAATCCACCCCCTTTTGGAGCCCAGTGTTCTCGCTAGCACTAGTCCCTCTCTCTCATCGATGTAGGATCTTACAATAATCAATGTTGAGGTCAGATTTTAGATGAATCATTTCATAGAACAAAACATGAAGATGTCAAATTGAATGTTTCTCTGTTGAAACGAGATGTGTGTTTGCCTAATTCTCGTGTTGCTAAAATCTCGATCAGTACCGATTGAATATTGATGATTGTGTTGTATAATTACCTCAAAACAAGTTCTTTGAGCTGCCTGTGACTGTTCTTCAAACAGTATATTGATGAATTCATCCATATGAAGGTGATGGAGATGCAATTCAATCAGCTTTAGCAGAGTGGACGGGTCAAACCTCGGTGCCTAACGTGTTTATCGGAGGAAAACACATCGGTGGTTGCGATGGTAACACCTGCTGACTTCATAGCATAATTGGCTACCTTGTGGCTGCTTCTCCCAAATTTTGCTCATCTTCTATCTCCATTTGTGTCATTGCAGCGGTTACAAATAAGCACAGCAGTGGTCAGCTGATGCCACTTCTTGCTGCTGCTGGTGCCATCGCCAATGACTCTGCTCAGCTATGA

mRNA sequence

ATGGGGTCGTGGTTCAGCTCAAACAAATTCAGTAAAGAAGAGCAGAATCAGTCGCTTAACGAGGCCAAGAAGATAATCTCCTCTAATCCCGTTGTTGTTTTCAGCAAGACTTACTGTGGGTATTGCTCGAGAGTCAAGGAGTTGCTCACACAGCTTGGAGCTAGTCATAAGGTCATTGAATTGGACCAAAAAAGTGATGGAGATGCAATTCAATCAGCTTTAGCAGAGTGGACGGGTCAAACCTCGGTGCCTAACGTGTTTATCGGAGGAAAACACATCGGTGGTTGCGATGCGGTTACAAATAAGCACAGCAGTGGTCAGCTGATGCCACTTCTTGCTGCTGCTGGTGCCATCGCCAATGACTCTGCTCAGCTATGA

Coding sequence (CDS)

ATGGGGTCGTGGTTCAGCTCAAACAAATTCAGTAAAGAAGAGCAGAATCAGTCGCTTAACGAGGCCAAGAAGATAATCTCCTCTAATCCCGTTGTTGTTTTCAGCAAGACTTACTGTGGGTATTGCTCGAGAGTCAAGGAGTTGCTCACACAGCTTGGAGCTAGTCATAAGGTCATTGAATTGGACCAAAAAAGTGATGGAGATGCAATTCAATCAGCTTTAGCAGAGTGGACGGGTCAAACCTCGGTGCCTAACGTGTTTATCGGAGGAAAACACATCGGTGGTTGCGATGCGGTTACAAATAAGCACAGCAGTGGTCAGCTGATGCCACTTCTTGCTGCTGCTGGTGCCATCGCCAATGACTCTGCTCAGCTATGA

Protein sequence

MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIELDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIANDSAQL
Homology
[Close]
BLAST of Cp4.1LG09g10220 vs. Swiss-Prot
Match: GRXC1_ARATH (Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 PE=2 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 2.8e-42
Identity = 84/125 (67.20%), Postives = 102/125 (81.60%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGS FS N+ SKEE    +N+AK+I+S+ PVVVFSKTYCGYC RVK+LLTQLGA+ KV+E
Sbjct: 1   MGSMFSGNRMSKEEMEVVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LD+ SDG  IQSAL+EWTGQT+VPNVFI G HIGGCD V   +  G+L+PLL  AGAIA+
Sbjct: 61  LDEMSDGGEIQSALSEWTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAIAD 120

Query: 121 DSAQL 126
           +S+QL
Sbjct: 121 NSSQL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. Swiss-Prot
Match: GLRX_RICCO (Glutaredoxin OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-35
Identity = 69/101 (68.32%), Postives = 85/101 (84.16%), Query Frame = 1 

Query: 18  SLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIELDQKSDGDAIQSALAEW 77
           ++ + K+++SSN VVVFSKTYC YC+ VK+LL QLGA +KV+ELD +SDG  IQ+ALAEW
Sbjct: 2   AMTKTKELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEW 61

Query: 78  TGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAI 119
           TGQ +VPNVFIGGKHIGGCD+ T KHS GQL+PLL  AGA+
Sbjct: 62  TGQRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEAGAV 102

[Close]
BLAST of Cp4.1LG09g10220 vs. Swiss-Prot
Match: GRXC2_ARATH (Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-34
Identity = 70/106 (66.04%), Postives = 83/106 (78.30%), Query Frame = 1 

Query: 18  SLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIELDQKSDGDAIQSALAEW 77
           ++ +AK+I++S  VVVFSKTYC YC RVKELL QLGA  K +ELD +SDG  IQS LAEW
Sbjct: 2   AMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEW 61

Query: 78  TGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIANDSA 124
           TGQ +VPNVFIGG HIGGCDA +N H  G+L+PLL  AGAIA  +A
Sbjct: 62  TGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]
BLAST of Cp4.1LG09g10220 vs. Swiss-Prot
Match: GLRX_SOLLC (Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-33
Identity = 68/105 (64.76%), Postives = 82/105 (78.10%), Query Frame = 1 

Query: 18  SLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIELDQKSDGDAIQSALAEW 77
           SL +AK+I+S NPV VFSKTYC +C  VK+LL++LGA+ K +ELD + DG  IQ+ALAEW
Sbjct: 2   SLAKAKEIVSGNPVAVFSKTYCPFCVSVKDLLSKLGATFKAVELDSEKDGSEIQAALAEW 61

Query: 78  TGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIANDS 123
           TGQ +VPNVFIG KHIGGCDA T  H  G+L+PLL  AGAIA  S
Sbjct: 62  TGQRTVPNVFIGRKHIGGCDATTALHREGKLLPLLTEAGAIAKTS 106

[Close]
BLAST of Cp4.1LG09g10220 vs. Swiss-Prot
Match: GLRX_VERFO (Glutaredoxin OS=Vernicia fordii PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.3e-33
Identity = 65/98 (66.33%), Postives = 80/98 (81.63%), Query Frame = 1 

Query: 21  EAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIELDQKSDGDAIQSALAEWTGQ 80
           +A++++SSN VVVFSKT+C YC+ VK+LL QLGA  KVIELD +SDG  +Q+ALAEWTGQ
Sbjct: 5   KAQELVSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSESDGSDLQNALAEWTGQ 64

Query: 81  TSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAI 119
            +VPNVFIGGKHIGGCD  T  H  G+L+PLL  AGA+
Sbjct: 65  RTVPNVFIGGKHIGGCDKTTGMHQEGKLIPLLTEAGAV 102

[Close]
BLAST of Cp4.1LG09g10220 vs. TrEMBL
Match: U3RGD2_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX2 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 6.7e-51
Identity = 102/125 (81.60%), Postives = 112/125 (89.60%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGSWFSSNKFSKEE   +LNE KKI+S++PVVVFSKTYCG+CS VK+LLTQLGA +KVIE
Sbjct: 1   MGSWFSSNKFSKEELELALNEVKKIVSTDPVVVFSKTYCGFCSSVKKLLTQLGARYKVIE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LDQKSDGD IQSALAEWTGQT+VPNVFIGGKHIGGCDAVT KH  GQL+PLL  AGAIA 
Sbjct: 61  LDQKSDGDKIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHHRGQLVPLLTEAGAIAG 120

Query: 121 DSAQL 126
           +SAQL
Sbjct: 121 NSAQL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. TrEMBL
Match: A0A164UMC9_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_026153 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.7e-42
Identity = 87/125 (69.60%), Postives = 106/125 (84.80%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGS FSS+  SKEE N +L +AK I+SS PVVVFSKT+CG+C  V++LL+QLGAS+KVIE
Sbjct: 1   MGSMFSSSSSSKEEINMALAKAKDIVSSTPVVVFSKTWCGFCKSVEQLLSQLGASYKVIE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LD++SDGD IQ+ALA+WTGQ +VPNVFIGGKH+GGCD VT KH  G+L+PLL  AGAIAN
Sbjct: 61  LDEESDGDDIQAALAQWTGQRTVPNVFIGGKHVGGCDDVTKKHREGKLVPLLTEAGAIAN 120

Query: 121 DSAQL 126
           +SA L
Sbjct: 121 NSALL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. TrEMBL
Match: I3S7F5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.4e-42
Identity = 90/125 (72.00%), Postives = 103/125 (82.40%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGS FSS   SKEE    +N+AK++ SS PV VFSKTYCGYC R+K+LLTQLGA++KVIE
Sbjct: 1   MGSAFSSG-LSKEEMETMMNKAKELASSAPVFVFSKTYCGYCKRLKDLLTQLGATYKVIE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LD + DGD IQSALAEWTGQ +VPNVFIGGKHIGGCD V  KH +GQL+PLL  AGAIAN
Sbjct: 61  LDTERDGDGIQSALAEWTGQRTVPNVFIGGKHIGGCDTVLEKHRAGQLVPLLNDAGAIAN 120

Query: 121 DSAQL 126
           +SAQL
Sbjct: 121 NSAQL 124

[Close]
BLAST of Cp4.1LG09g10220 vs. TrEMBL
Match: A0A087GDS5_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G462200 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.4e-42
Identity = 86/125 (68.80%), Postives = 104/125 (83.20%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGS FS N+ +KEE    LN+AK+I+S+ PVVVFSKTYCGYC RVK+LLTQLGAS KV+E
Sbjct: 1   MGSMFSGNRLNKEEMEVVLNKAKEIVSTYPVVVFSKTYCGYCQRVKQLLTQLGASFKVLE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LD+ SDG  IQSAL+EWTGQT+VPNVFI GKHIGGCD+V   +  G+L+PLL  AGAIAN
Sbjct: 61  LDEMSDGSEIQSALSEWTGQTTVPNVFIKGKHIGGCDSVMESNKQGKLVPLLTEAGAIAN 120

Query: 121 DSAQL 126
           +S++L
Sbjct: 121 NSSEL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. TrEMBL
Match: W9S7L1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014582 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.8e-41
Identity = 87/125 (69.60%), Postives = 104/125 (83.20%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGS    N+ SKEE   +LN+ K+I+SS+PVVVFSKTYCGYC+RVK LLTQLGA+ KVIE
Sbjct: 1   MGSVLGINRKSKEELKMALNKVKQIVSSHPVVVFSKTYCGYCTRVKNLLTQLGAAFKVIE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LD++SDG  +Q+ALAEWTG+ +VPNVFI GK+IGGCD+V   H SGQL+PLL  AGAIAN
Sbjct: 61  LDEESDGGDMQAALAEWTGRRTVPNVFIAGKNIGGCDSVLELHQSGQLLPLLTNAGAIAN 120

Query: 121 DSAQL 126
           DSAQL
Sbjct: 121 DSAQL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. TAIR10
Match: AT5G63030.1 (AT5G63030.1 Thioredoxin superfamily protein)

HSP 1 Score: 172.6 bits (436), Expect = 1.6e-43
Identity = 84/125 (67.20%), Postives = 102/125 (81.60%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGS FS N+ SKEE    +N+AK+I+S+ PVVVFSKTYCGYC RVK+LLTQLGA+ KV+E
Sbjct: 1   MGSMFSGNRMSKEEMEVVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LD+ SDG  IQSAL+EWTGQT+VPNVFI G HIGGCD V   +  G+L+PLL  AGAIA+
Sbjct: 61  LDEMSDGGEIQSALSEWTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAIAD 120

Query: 121 DSAQL 126
           +S+QL
Sbjct: 121 NSSQL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. TAIR10
Match: AT5G40370.2 (AT5G40370.2 Glutaredoxin family protein)

HSP 1 Score: 131.3 bits (329), Expect = 4.0e-31
Identity = 62/91 (68.13%), Postives = 70/91 (76.92%), Query Frame = 1 

Query: 33  VFSKTYCGYCSRVKELLTQLGASHKVIELDQKSDGDAIQSALAEWTGQTSVPNVFIGGKH 92
           + SKTYC YC RVKELL QLGA  K +ELD +SDG  IQS LAEWTGQ +VPNVFIGG H
Sbjct: 42  ICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPNVFIGGNH 101

Query: 93  IGGCDAVTNKHSSGQLMPLLAAAGAIANDSA 124
           IGGCDA +N H  G+L+PLL  AGAIA  +A
Sbjct: 102 IGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 132

[Close]
BLAST of Cp4.1LG09g10220 vs. TAIR10
Match: AT5G20500.1 (AT5G20500.1 Glutaredoxin family protein)

HSP 1 Score: 95.9 bits (237), Expect = 1.9e-20
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 1 

Query: 23  KKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIELDQKSDGDAIQSALAEWTGQTS 82
           KK ISS+ +V+FSK+YC YC + K +  +L     V+ELD++ DG +IQ+AL E  G+ +
Sbjct: 36  KKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDGWSIQTALGEIVGRRT 95

Query: 83  VPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIANDSAQL 126
           VP VFI GKH+GG D   + + SG+L  LL  +G   N  A+L
Sbjct: 96  VPQVFINGKHLGGSDDTVDAYESGELAKLLGVSG---NKEAEL 135

[Close]
BLAST of Cp4.1LG09g10220 vs. TAIR10
Match: AT1G77370.1 (AT1G77370.1 Glutaredoxin family protein)

HSP 1 Score: 95.5 bits (236), Expect = 2.5e-20
Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 1 

Query: 26  ISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIELDQKSDGDAIQSALAEWTGQTSVPN 85
           I SN +V+FSK+YC YC R K + +QL     V+ELDQ+ DGD IQ  L E+ G+ +VP 
Sbjct: 41  ILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQ 100

Query: 86  VFIGGKHIGGCDAVTNKHSSGQLMPLLAAA 116
           VF+ GKHIGG D +     SGQL  LLAA+
Sbjct: 101 VFVNGKHIGGSDDLGAALESGQLQKLLAAS 130

[Close]
BLAST of Cp4.1LG09g10220 vs. TAIR10
Match: AT4G28730.1 (AT4G28730.1 Glutaredoxin family protein)

HSP 1 Score: 87.0 bits (214), Expect = 8.7e-18
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 1 

Query: 23  KKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIELDQKS-DGDAIQSALAEWTGQT 82
           +K ++ N VV++SKT+C YC+ VK L  +LG    V+ELDQ    G  +Q  L   TGQ 
Sbjct: 74  RKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQH 133

Query: 83  SVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAA 116
           +VPNVF+ GKHIGGC      +  G L  +LA A
Sbjct: 134 TVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEA 167

[Close]
BLAST of Cp4.1LG09g10220 vs. NCBI nr
Match: gi|564112208|ref|NP_001274139.1| (glutaredoxin [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 9.6e-51
Identity = 102/125 (81.60%), Postives = 112/125 (89.60%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGSWFSSNKFSKEE   +LNE KKI+S++PVVVFSKTYCG+CS VK+LLTQLGA +KVIE
Sbjct: 1   MGSWFSSNKFSKEELELALNEVKKIVSTDPVVVFSKTYCGFCSSVKKLLTQLGARYKVIE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LDQKSDGD IQSALAEWTGQT+VPNVFIGGKHIGGCDAVT KH  GQL+PLL  AGAIA 
Sbjct: 61  LDQKSDGDKIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHHRGQLVPLLTEAGAIAG 120

Query: 121 DSAQL 126
           +SAQL
Sbjct: 121 NSAQL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. NCBI nr
Match: gi|659067274|ref|XP_008438572.1| (PREDICTED: glutaredoxin [Cucumis melo])

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-48
Identity = 99/125 (79.20%), Postives = 111/125 (88.80%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGSWFSSNKFSKEE   +LNE KKIIS++PVVVFSKTYCG+CS VK+LLTQLGA +KVIE
Sbjct: 1   MGSWFSSNKFSKEELEVALNEVKKIISTDPVVVFSKTYCGFCSSVKKLLTQLGARYKVIE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           L+Q+S+GD IQSALAEWTGQT+VPNVFIGGKHIGGCDAVT KH  GQL+PLL  AGAIA 
Sbjct: 61  LNQESNGDKIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHHRGQLVPLLTEAGAIAG 120

Query: 121 DSAQL 126
           +SA L
Sbjct: 121 NSAPL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. NCBI nr
Match: gi|1009130905|ref|XP_015882550.1| (PREDICTED: glutaredoxin [Ziziphus jujuba])

HSP 1 Score: 183.3 bits (464), Expect = 2.5e-43
Identity = 89/125 (71.20%), Postives = 108/125 (86.40%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGS+ SS+K S+EE   +L++AK+I++SNPVVVFSKTYCGYC RVK+LLTQLGAS+KVIE
Sbjct: 1   MGSFLSSSKKSQEELEMALDKAKQIVNSNPVVVFSKTYCGYCKRVKQLLTQLGASYKVIE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LD++SDG  IQS LA+WTGQ +VPNVFIGGKHIGGCD+V  KH +G L+PLL  AGAI N
Sbjct: 61  LDEESDGSEIQSELAKWTGQRTVPNVFIGGKHIGGCDSVLEKHQAGLLVPLLTDAGAITN 120

Query: 121 DSAQL 126
           +SAQL
Sbjct: 121 NSAQL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. NCBI nr
Match: gi|1021576740|ref|XP_016179544.1| (PREDICTED: glutaredoxin-C1 [Arachis ipaensis])

HSP 1 Score: 181.8 bits (460), Expect = 7.4e-43
Identity = 91/125 (72.80%), Postives = 104/125 (83.20%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGS+ SS K SKEE   +LN+AK+I SS PVVVFSKTYCGYC RVK+LLTQL AS KVIE
Sbjct: 1   MGSFLSSQKISKEELEMALNKAKQIASSAPVVVFSKTYCGYCKRVKDLLTQLSASFKVIE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LD++ DG  IQ+ALAEWTGQ +VPNVFIGGKHIGGCD+V  KH + QL+PLL  AGAIAN
Sbjct: 61  LDEEGDGGHIQAALAEWTGQNTVPNVFIGGKHIGGCDSVLEKHRANQLVPLLNDAGAIAN 120

Query: 121 DSAQL 126
           +SAQL
Sbjct: 121 NSAQL 125

[Close]
BLAST of Cp4.1LG09g10220 vs. NCBI nr
Match: gi|1021031293|gb|KZM89078.1| (hypothetical protein DCAR_026153 [Daucus carota subsp. sativus])

HSP 1 Score: 178.3 bits (451), Expect = 8.2e-42
Identity = 87/125 (69.60%), Postives = 106/125 (84.80%), Query Frame = 1 

Query: 1   MGSWFSSNKFSKEEQNQSLNEAKKIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60
           MGS FSS+  SKEE N +L +AK I+SS PVVVFSKT+CG+C  V++LL+QLGAS+KVIE
Sbjct: 1   MGSMFSSSSSSKEEINMALAKAKDIVSSTPVVVFSKTWCGFCKSVEQLLSQLGASYKVIE 60

Query: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLMPLLAAAGAIAN 120
           LD++SDGD IQ+ALA+WTGQ +VPNVFIGGKH+GGCD VT KH  G+L+PLL  AGAIAN
Sbjct: 61  LDEESDGDDIQAALAQWTGQRTVPNVFIGGKHVGGCDDVTKKHREGKLVPLLTEAGAIAN 120

Query: 121 DSAQL 126
           +SA L
Sbjct: 121 NSALL 125

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g10220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRXC1_ARATH2.8e-4267.20Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 PE=2 SV=2[more]
GLRX_RICCO1.1e-3568.32Glutaredoxin OS=Ricinus communis PE=3 SV=1[more]
GRXC2_ARATH1.3e-3466.04Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 PE=2 SV=1[more]
GLRX_SOLLC2.4e-3364.76Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1[more]
GLRX_VERFO5.3e-3366.33Glutaredoxin OS=Vernicia fordii PE=3 SV=1[more]
BLAST of Cp4.1LG09g10220 vs. TrEMBL
Match NameE-valueIdentityDescription
U3RGD2_CUCSA6.7e-5181.60Glutaredoxin OS=Cucumis sativus GN=GRX2 PE=2 SV=1[more]
A0A164UMC9_DAUCA5.7e-4269.60Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_026153 PE=4 SV=1[more]
I3S7F5_LOTJA7.4e-4272.00Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
A0A087GDS5_ARAAL7.4e-4268.80Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G462200 PE=4 SV=1[more]
W9S7L1_9ROSA2.8e-4169.60Uncharacterized protein OS=Morus notabilis GN=L484_014582 PE=4 SV=1[more]
BLAST of Cp4.1LG09g10220 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G63030.11.6e-4367.20 Thioredoxin superfamily protein[more]
AT5G40370.24.0e-3168.13 Glutaredoxin family protein[more]
AT5G20500.11.9e-2045.63 Glutaredoxin family protein[more]
AT1G77370.12.5e-2052.22 Glutaredoxin family protein[more]
AT4G28730.18.7e-1845.74 Glutaredoxin family protein[more]
BLAST of Cp4.1LG09g10220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|564112208|ref|NP_001274139.1|9.6e-5181.60glutaredoxin [Cucumis sativus][more]
gi|659067274|ref|XP_008438572.1|1.5e-4879.20PREDICTED: glutaredoxin [Cucumis melo][more]
gi|1009130905|ref|XP_015882550.1|2.5e-4371.20PREDICTED: glutaredoxin [Ziziphus jujuba][more]
gi|1021576740|ref|XP_016179544.1|7.4e-4372.80PREDICTED: glutaredoxin-C1 [Arachis ipaensis][more]
gi|1021031293|gb|KZM89078.1|8.2e-4269.60hypothetical protein DCAR_026153 [Daucus carota subsp. sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR012336Thioredoxin-like_fold
IPR011899Glutaredoxin_euk/vir
IPR002109Glutaredoxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005623 cell
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g10220.1Cp4.1LG09g10220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 31..93
score: 3.1
IPR002109GlutaredoxinPROFILEPS51354GLUTAREDOXIN_2coord: 19..119
score: 25
IPR011899Glutaredoxin, eukaryotic/virialTIGRFAMsTIGR02180TIGR02180coord: 31..111
score: 1.4
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 17..118
score: 2.2
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 20..117
score: 4.71
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 76..89
score: 1.1E-15coord: 90..103
score: 1.1E-15coord: 31..49
score: 1.1
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 1..122
score: 1.4
NoneNo IPR availablePANTHERPTHR10168:SF73GLUTAREDOXIN-C1coord: 1..122
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g10220Cucsa.098540Cucumber (Gy14) v1cgycpeB0201
Cp4.1LG09g10220Cla003456Watermelon (97103) v1cpewmB033
Cp4.1LG09g10220Csa1G046180Cucumber (Chinese Long) v2cpecuB029
Cp4.1LG09g10220MELO3C002276Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g10220ClCG01G013260Watermelon (Charleston Gray)cpewcgB026
Cp4.1LG09g10220CSPI01G08600Wild cucumber (PI 183967)cpecpiB025
Cp4.1LG09g10220Lsi02G003820Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g10220MELO3C021562.2Melon (DHL92) v3.6.1cpemedB022
Cp4.1LG09g10220MELO3C002276.2Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g10220CsaV3_5G027260Cucumber (Chinese Long) v3cpecucB0049
Cp4.1LG09g10220CsaV3_1G008620Cucumber (Chinese Long) v3cpecucB0031
Cp4.1LG09g10220Bhi08G001325Wax gourdcpewgoB0046
Cp4.1LG09g10220Bhi06G000444Wax gourdcpewgoB0024
Cp4.1LG09g10220CsGy1G008510Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g10220Carg02313Silver-seed gourdcarcpeB0363
Cp4.1LG09g10220Carg06734Silver-seed gourdcarcpeB0694
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g10220Cucurbita pepo (Zucchini)cpecpeB028
Cp4.1LG09g10220Cucurbita pepo (Zucchini)cpecpeB045
Cp4.1LG09g10220Cucurbita pepo (Zucchini)cpecpeB049
Cp4.1LG09g10220Cucurbita pepo (Zucchini)cpecpeB055
Cp4.1LG09g10220Cucumber (Gy14) v1cgycpeB0553
Cp4.1LG09g10220Cucurbita maxima (Rimu)cmacpeB071
Cp4.1LG09g10220Cucurbita maxima (Rimu)cmacpeB213
Cp4.1LG09g10220Cucurbita maxima (Rimu)cmacpeB214
Cp4.1LG09g10220Cucurbita maxima (Rimu)cmacpeB416
Cp4.1LG09g10220Cucurbita moschata (Rifu)cmocpeB043
Cp4.1LG09g10220Cucurbita moschata (Rifu)cmocpeB082
Cp4.1LG09g10220Cucurbita moschata (Rifu)cmocpeB183
Cp4.1LG09g10220Cucurbita moschata (Rifu)cmocpeB184
Cp4.1LG09g10220Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g10220Wild cucumber (PI 183967)cpecpiB020
Cp4.1LG09g10220Cucumber (Chinese Long) v2cpecuB025
Cp4.1LG09g10220Bottle gourd (USVL1VR-Ls)cpelsiB042
Cp4.1LG09g10220Watermelon (Charleston Gray)cpewcgB050
Cp4.1LG09g10220Watermelon (97103) v1cpewmB060
Cp4.1LG09g10220Melon (DHL92) v3.5.1cpemeB035
Cp4.1LG09g10220Cucumber (Gy14) v2cgybcpeB012
Cp4.1LG09g10220Melon (DHL92) v3.6.1cpemedB040
Cp4.1LG09g10220Silver-seed gourdcarcpeB0506
Cp4.1LG09g10220Silver-seed gourdcarcpeB1394
Cp4.1LG09g10220Silver-seed gourdcarcpeB1396
Cp4.1LG09g10220Cucumber (Chinese Long) v3cpecucB0023