Cp4.1LG09g09850 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g09850
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	26S proteasome non-ATPase regulatory subunit 6 homolog
Location	Cp4.1LG09 : 8715349 .. 8718424 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGGAAGCCACACCTCCGCCAATCTTGGTGCCTCCTCCTGCAAGAAAGACATCACAGGGACGACGCCCAAATTCTTCACTCGGCGAGCAATTTCTCAGTCGCCATGGAAGGACAGGAGGGAACTCAGCAGCCTCATCTCGTGCTTGCTAACAAGCTCTTCCTTCTAACTCACCCGGATGTTCAAGATATCGAGAAGGTTAATCTTAGGGAGGAAGTATTGGCCTCCGTTAAAGCTGATGGTAATTCGCGGATTGCTTCATACTCTCAATGAGTTTCATCGATTTCGCATTGTGATTTCTGTCTTACGAAATGTGGTTTTTTCTTCTCTGTAATTTGTATTGTGTAGACATGGCTCCTTTATACGAAGCCCTAACCGGCAATTCGCTGTTGGATTTGGATCGGAACGTGTTGGACTCGATGCGTGCGAAAAACGAGGAGGAGTTGAAGAAGCTGGACGAGAAGTGAGTTCTTTCATACTATCGTTGATCTGTTTTTTCGAGTGTTCTTTAGTGTGAGGGTTATGTAGGAGAGTACATCTGAAGTTCTTTGAATATACGTGAATGTGCATTAAGTTGATTATCCTTGAATTGGCATCGATTTACAGTTCCACTTCCTATCAACACATCGACTTTCAACTTTAGTTAATTCGGAATTTCCATGGATGTGCGAATCTGTTCTATTTGAGGCGCAGTTCTACTTAGCTTTTGGATATGATTCTACCATAACTGACCTTACTTTGCTAAATTCCTAATTGATGAAAGGTTATGCTGCTGCTGAATGTTTTGATTTTGTATGGTGACTTTCTGTGGTTCTTTTTGTTTTATAGTAATTGAATATGACGAGTAGGGCACATATGAGTTCAAAATATTGTTGCACGCTGATGGGAAATAGATTTCAGATCTACTAAAATAGATTGAATAACCAACAATACAAGTTGCTAAATGATGATCTGGTAATTTGAAGAATTTTGAGAACTCCTTCGAGTCGATATCTATTGAAACTCTCGTTGAGTCCCTTCACTGCATTCCTCCTTTATTTAAACAACGCACTTAATGCATACCCACACTGGATATGGATTTGGATTTGAATGGTTGATCTGTGTTTCTTGTAGTTAATGGCCACTATTTTTGTAGCTGTTTATGGTGCCATGCTGTTGTGTGTTATTTTGTTTATAACTTTGAACAGAACAGCAATGTGTTTATTTAGCCATTCATCAATCTTTTACTCAGGATTGCTGATGCTGAAGAAAACTTGGGTGAAAGTGAAGTTCGAGAAGCTCATTTAGCCAAATCACTTTTCTTCATTCGTATCGGTGATAAGGTTCGTTAAATCTTTCTCCCCAAGTATTGTAGGGCTGTTCTACGACTTCCACCTAACGTTCTAGATTTTGACCTCAGGACAGAGCACTGGAGCAACTCAAGGTAACTGAGAGCAAAACAGTTGCGGTTGGACTTAAGATGGATTTGGTTTTCCATACTCTACAGCTTGGATTTTTCTACATGGATTTTGACCTCATCTCGAAAAGTATCGAAAAAGCTAAAAAGTAAGCCATGATATGAACATCGCGCGTAGTATTTCTTTTCAAAATCAACATTTGTATGTTATTGGTTGTGATTGTTGGATGATAGAAGTCCCACATCGGCTAATTTAGGGAATGATCATGGGTTTATAATCAAAGAATACACTCTCCATTGGTGTGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAGAGAGTCATGTTCGTCTAACAGTGATTACTTGCTCTGTTTGCCAGCTTGTTTGAAGAAGGAGGTGATTGGGAAAGAAAGAATCGTCTGAAGGTGTATGAAGGCTTGTACTGCATGTCGACTCGAAACTTCAAGAAAGCAGCCAACTTGTTTTTGGATTCCATCTCGACTTTCACTACATACGAGCTTTTTCCTTATGACACATTCATATTTTATACAGTTCTCACAAGCATTATATCTTTGGATAGAGTGTCTCTAAAGCAAAAGGTACTTAAAATTTCCATGAATTTGCATTAAGTTTTTTGTATCATGGATAGTTGGCACGTCTTCCCAATTGCTCTATCGATTTTCATTCATTTACTGTAGGTCGTTGATGCCCCTGAGATATTGACGGTGATCGGAAAAGTCCCATACCTTTCTGACTTTTTGAACTCTTTGTATGACTGTCAATATAAATCATTTTTCTCAGCCTTCGGTAAGCAGGAAATTTTACACGATGCTTAAATCCGTGACCGATAATCTACTTGTTTCGGGTTTCACATTTCTTTATTTGATCTGTATCAATGCAGCTGGTCTGACCGAGCAAATAAAATTAGACCGTTATTTGCACCCGCACTTCAGGTACTACATGAGAGAGGTCAGAACTGTTGTTTATTCCCAGTTTCTGGAGTCCTATAAGAGTGTCACAATCAAAGCAATGGCTAATGCATTTGGAGTATCTGTGGAATTTATCGATCTGTAAGTGTTCATGCATGGATACTAATCGTCTAAATGATGTCTAAATGATTGTTCTCTCTCATAAAATGTGTTTCTCTGATGGTGCCAGGGAGTTGTCTCGTTTCATTGCTGCGGGAAAACTTCATTGCAAGATCGATAAAGTAGCAGGTGTTCTCGAAACTAATCGTCCTGATTCGAAGAACGCTCTGTACCAAGCTACCATCAAGCAAGGAGACTTCTTACTTAACCGTATCCAGAAGTTGTCTCGTGTCATTGATCTGTAACTACGATTTTAGTTTGCGTCGATGAAATTTGAGCATCGGAACTTCGTGAAAATGGCGCTGTCGTTTCGTTCTAAACACATTGGCGCCTCAGGCTTACTGTCGTCGTTATTACTTGATTTTGATATATCAATTGAGTGTCTTGTTAGAAATTAGATGAATGCTTTACACTGGCCCTTTTCATGTCTTCTTGTTTTTTCTAGAGTCATATTCGTTTTATCTTTCCTTCTTTTTATATCGACTTTTGAGCACGAAACCGGGATCAATATGTCTAGCTTGATGAATTGAGACGGTTGGATGATGAAAG

mRNA sequence

AAATGGAAGCCACACCTCCGCCAATCTTGGTGCCTCCTCCTGCAAGAAAGACATCACAGGGACGACGCCCAAATTCTTCACTCGGCGAGCAATTTCTCAGTCGCCATGGAAGGACAGGAGGGAACTCAGCAGCCTCATCTCGTGCTTGCTAACAAGCTCTTCCTTCTAACTCACCCGGATGTTCAAGATATCGAGAAGGTTAATCTTAGGGAGGAAGTATTGGCCTCCGTTAAAGCTGATGACATGGCTCCTTTATACGAAGCCCTAACCGGCAATTCGCTGTTGGATTTGGATCGGAACGTGTTGGACTCGATGCGTGCGAAAAACGAGGAGGAGTTGAAGAAGCTGGACGAGAAGATTGCTGATGCTGAAGAAAACTTGGGTGAAAGTGAAGTTCGAGAAGCTCATTTAGCCAAATCACTTTTCTTCATTCGTATCGGTGATAAGGACAGAGCACTGGAGCAACTCAAGGTAACTGAGAGCAAAACAGTTGCGGTTGGACTTAAGATGGATTTGGTTTTCCATACTCTACAGCTTGGATTTTTCTACATGGATTTTGACCTCATCTCGAAAAGCTTGTACTGCATGTCGACTCGAAACTTCAAGAAAGCAGCCAACTTGTTTTTGGATTCCATCTCGACTTTCACTACATACGAGCTTTTTCCTTATGACACATTCATATTTTATACAGTTCTCACAAGCATTATATCTTTGGATAGAGTGTCTCTAAAGCAAAAGGTCGTTGATGCCCCTGAGATATTGACGGTGATCGGAAAAGTCCCATACCTTTCTGACTTTTTGAACTCTTTGTATGACTGTCAATATAAATCATTTTTCTCAGCCTTCGCTGGTCTGACCGAGCAAATAAAATTAGACCGTTATTTGCACCCGCACTTCAGGTACTACATGAGAGAGGTCAGAACTGTTGTTTATTCCCAGTTTCTGGAGTCCTATAAGAGTGTCACAATCAAAGCAATGGCTAATGCATTTGGAGTATCTGTGGAATTTATCGATCTGGAGTTGTCTCGTTTCATTGCTGCGGGAAAACTTCATTGCAAGATCGATAAAGTAGCAGGTGTTCTCGAAACTAATCGTCCTGATTCGAAGAACGCTCTGTACCAAGCTACCATCAAGCAAGGAGACTTCTTACTTAACCGTATCCAGAAGTTGTCTCGTGTCATTGATCTGTAACTACGATTTTAGTTTGCGTCGATGAAATTTGAGCATCGGAACTTCGTGAAAATGGCGCTGTCGTTTCGTTCTAAACACATTGGCGCCTCAGGCTTACTGTCGTCGTTATTACTTGATTTTGATATATCAATTGAGTGTCTTGTTAGAAATTAGATGAATGCTTTACACTGGCCCTTTTCATGTCTTCTTGTTTTTTCTAGAGTCATATTCGTTTTATCTTTCCTTCTTTTTATATCGACTTTTGAGCACGAAACCGGGATCAATATGTCTAGCTTGATGAATTGAGACGGTTGGATGATGAAAG

Coding sequence (CDS)

AAATGGAAGCCACACCTCCGCCAATCTTGGTGCCTCCTCCTGCAAGAAAGACATCACAGGGACGACGCCCAAATTCTTCACTCGGCGAGCAATTTCTCAGTCGCCATGGAAGGACAGGAGGGAACTCAGCAGCCTCATCTCGTGCTTGCTAACAAGCTCTTCCTTCTAACTCACCCGGATGTTCAAGATATCGAGAAGGTTAATCTTAGGGAGGAAGTATTGGCCTCCGTTAAAGCTGATGACATGGCTCCTTTATACGAAGCCCTAACCGGCAATTCGCTGTTGGATTTGGATCGGAACGTGTTGGACTCGATGCGTGCGAAAAACGAGGAGGAGTTGAAGAAGCTGGACGAGAAGATTGCTGATGCTGAAGAAAACTTGGGTGAAAGTGAAGTTCGAGAAGCTCATTTAGCCAAATCACTTTTCTTCATTCGTATCGGTGATAAGGACAGAGCACTGGAGCAACTCAAGGTAACTGAGAGCAAAACAGTTGCGGTTGGACTTAAGATGGATTTGGTTTTCCATACTCTACAGCTTGGATTTTTCTACATGGATTTTGACCTCATCTCGAAAAGCTTGTACTGCATGTCGACTCGAAACTTCAAGAAAGCAGCCAACTTGTTTTTGGATTCCATCTCGACTTTCACTACATACGAGCTTTTTCCTTATGACACATTCATATTTTATACAGTTCTCACAAGCATTATATCTTTGGATAGAGTGTCTCTAAAGCAAAAGGTCGTTGATGCCCCTGAGATATTGACGGTGATCGGAAAAGTCCCATACCTTTCTGACTTTTTGAACTCTTTGTATGACTGTCAATATAAATCATTTTTCTCAGCCTTCGCTGGTCTGACCGAGCAAATAAAATTAGACCGTTATTTGCACCCGCACTTCAGGTACTACATGAGAGAGGTCAGAACTGTTGTTTATTCCCAGTTTCTGGAGTCCTATAAGAGTGTCACAATCAAAGCAATGGCTAATGCATTTGGAGTATCTGTGGAATTTATCGATCTGGAGTTGTCTCGTTTCATTGCTGCGGGAAAACTTCATTGCAAGATCGATAAAGTAGCAGGTGTTCTCGAAACTAATCGTCCTGATTCGAAGAACGCTCTGTACCAAGCTACCATCAAGCAAGGAGACTTCTTACTTAACCGTATCCAGAAGTTGTCTCGTGTCATTGATCTGTAA

Protein sequence

KWKPHLRQSWCLLLQERHHRDDAQILHSASNFSVAMEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNALYQATIKQGDFLLNRIQKLSRVIDL

Homology

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BLAST of Cp4.1LG09g09850 vs. Swiss-Prot
Match: PSMD6_ARATH (26S proteasome non-ATPase regulatory subunit 6 homolog OS=Arabidopsis thaliana GN=RPN7 PE=1 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 4.9e-165
Identity = 301/384 (78.39%), Postives = 338/384 (88.02%), Query Frame = 1


Query: 38  GQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDL 97
           G EG+QQPHL+LANKLFLLTHPDV DIEKV L+ EVL  +++  MAPLYE L  +S+LDL
Sbjct: 4   GAEGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDL 63

Query: 98  DRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLK 157
           D+++L+SMRA NEEELKKLDEKIADAEENLGESEVREAHLAK+L+FIRI DK++ALEQLK
Sbjct: 64  DQSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLK 123

Query: 158 VTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS------------------------- 217
           +TE KTVAVG KMD+VF+TLQL FFYMDFDL+SKS                         
Sbjct: 124 LTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEG 183

Query: 218 LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPE 277
           LYCMSTRNFKKAA+LFLDSISTFTTYE+FPY+TFIFYTVLTSII+LDRVSLKQKVVDAPE
Sbjct: 184 LYCMSTRNFKKAASLFLDSISTFTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDAPE 243

Query: 278 ILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYS 337
           ILTV+GK+P+LS+FLNSLY+CQYK+FFSAFAG+  QIK DRYL+PHFR+YMREVRTVVYS
Sbjct: 244 ILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYS 303

Query: 338 QFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNAL 397
           QFLESYKSVT++AMA AFGVSV+FID ELSRFIAAGKLHCKIDKVAGVLETNRPD+KNAL
Sbjct: 304 QFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNAL 363

[Close]

BLAST of Cp4.1LG09g09850 vs. Swiss-Prot
Match: PSMD6_ORYSJ (26S proteasome non-ATPase regulatory subunit 6 OS=Oryza sativa subsp. japonica GN=RPN7 PE=2 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 4.5e-163
Identity = 300/384 (78.12%), Postives = 336/384 (87.50%), Query Frame = 1


Query: 38  GQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDL 97
           G+EG QQPHLVLA+KLFLL+HPDV D+ KV+LR +VLA+VK+DDMA LYE+L    +L+ 
Sbjct: 6   GEEGKQQPHLVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLET 65

Query: 98  DRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLK 157
           D  +L  MR + EEE++KLDEKIADAEENLGESEVREAHLAKSL+FIR+G+K++ALEQLK
Sbjct: 66  DAALLAEMRGRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLK 125

Query: 158 VTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS------------------------- 217
           VTE KTVAVG KMDLVFHTLQ+GFFYMDFDLISKS                         
Sbjct: 126 VTEGKTVAVGQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEG 185

Query: 218 LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPE 277
           LYCM+TRNFKKAA+LFLDSISTFTTYELFPYDTFIFYTVLTS+ISLDRVSLK KVVDAPE
Sbjct: 186 LYCMATRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSVISLDRVSLKAKVVDAPE 245

Query: 278 ILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYS 337
           IL VIGKVP+LS+FLNSLY+CQYKSFF+AF+GLTEQIKLDRYL PHFRYYMREVRTVVYS
Sbjct: 246 ILAVIGKVPHLSEFLNSLYNCQYKSFFAAFSGLTEQIKLDRYLQPHFRYYMREVRTVVYS 305

Query: 338 QFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNAL 397
           QFLESYKSVT++AMA+AFGV+V+FIDLELSRFIAAGKLHCKIDKVA VLETNRPD++NA 
Sbjct: 306 QFLESYKSVTMEAMASAFGVTVDFIDLELSRFIAAGKLHCKIDKVACVLETNRPDARNAF 365

[Close]

BLAST of Cp4.1LG09g09850 vs. Swiss-Prot
Match: PSMD6_HUMAN (26S proteasome non-ATPase regulatory subunit 6 OS=Homo sapiens GN=PSMD6 PE=1 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.1e-95
Identity = 188/379 (49.60%), Postives = 266/379 (70.18%), Query Frame = 1


Query: 43  QQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDLDRNVL 102
           + P L +A   FLL+ P+ +    V  R+E++A+V+ ++MAP YEAL  +    +D ++L
Sbjct: 13  KNPDLRIAQLRFLLSLPEHRGDAAV--RDELMAAVRDNNMAPYYEALCKSLDWQIDVDLL 72

Query: 103 DSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLKVTESK 162
           + M+  NE+ELK+LDE++ DAE+NLGESE+R+A +AK+ +  RIGDK+ AL   + T  K
Sbjct: 73  NKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDK 132

Query: 163 TVAVGLKMDLVFHTLQLGFFYMDFDLISKS-------------------------LYCMS 222
           TVA+G ++D+VF+ L++G FYMD DLI+++                         LYC++
Sbjct: 133 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVA 192

Query: 223 TRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVI 282
            R+FK+AA LFLD++STFT+YEL  Y TF+ YTV  S+I+L+R  L++KV+   EIL V+
Sbjct: 193 IRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL 252

Query: 283 GKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLES 342
             +P +  +L SLY+C+Y  FF + A + +++K D    PH+RYY+RE+R   YSQ LES
Sbjct: 253 HSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLES 312

Query: 343 YKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNALYQATI 397
           Y+S+T+  MA AFGV VEFID ELSRFIAAG+LHCKIDKV  ++ETNRPDSKN  YQ TI
Sbjct: 313 YRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETI 372

[Close]

BLAST of Cp4.1LG09g09850 vs. Swiss-Prot
Match: PSMD6_MOUSE (26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus GN=Psmd6 PE=1 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 5.3e-95
Identity = 188/379 (49.60%), Postives = 265/379 (69.92%), Query Frame = 1


Query: 43  QQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDLDRNVL 102
           + P L +A   FLL+ P+ +    V  REE++A+V+ ++MAP YEAL  +    +D ++L
Sbjct: 13  KNPDLRIAQLRFLLSLPEHRGDAAV--REELMAAVRENNMAPYYEALCKSLDWQMDVDLL 72

Query: 103 DSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLKVTESK 162
             M+  NEEELK+LDE++ DAE+NLGESE+R+A +AK+ +  +IGDK+ AL   + T  K
Sbjct: 73  SKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALTAFRKTYDK 132

Query: 163 TVAVGLKMDLVFHTLQLGFFYMDFDLISKS-------------------------LYCMS 222
           TVA+G ++D+VF+ L++G FYMD DLI+++                         LYC++
Sbjct: 133 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVA 192

Query: 223 TRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVI 282
            R+FK+AA LFLD++STFT+YEL  Y TF+ YTV  S+I+L+R  L++KV+   EIL V+
Sbjct: 193 IRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL 252

Query: 283 GKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLES 342
             +P +  +L SLY+C+Y  FF + A + +++K D    PH+RYY+RE+R   YSQ LES
Sbjct: 253 HSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLES 312

Query: 343 YKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNALYQATI 397
           Y+S+T+  MA AFGV V+FID ELSRFIAAG+LHCKIDKV  ++ETNRPDSKN  YQ TI
Sbjct: 313 YRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETI 372

[Close]

BLAST of Cp4.1LG09g09850 vs. Swiss-Prot
Match: PSMD6_BOVIN (26S proteasome non-ATPase regulatory subunit 6 OS=Bos taurus GN=PSMD6 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.0e-94
Identity = 188/379 (49.60%), Postives = 265/379 (69.92%), Query Frame = 1


Query: 43  QQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDLDRNVL 102
           + P L +A   FLL+ P+ +    V  R+E++A+V+ ++MAP YEAL  +    +D ++L
Sbjct: 13  KNPDLRIAQLRFLLSLPEHRGDAAV--RDELMAAVRDNNMAPYYEALCKSLEWQMDVDLL 72

Query: 103 DSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLKVTESK 162
           + M+  NE+ELK+LDE++ DAE+NLGESE+R+A +AK+ +  RIGDK+ AL   + T  K
Sbjct: 73  NKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRRTYDK 132

Query: 163 TVAVGLKMDLVFHTLQLGFFYMDFDLISKS-------------------------LYCMS 222
           TVA+G ++D+VF+ L++G FYMD DLI+++                         LYC++
Sbjct: 133 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVA 192

Query: 223 TRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVI 282
            R+FK+AA LFLD++STFT+YEL  Y TF+ YTV  S+I+L+R  L++KV+   EIL V+
Sbjct: 193 IRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL 252

Query: 283 GKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLES 342
             +P +  +L SLY+C+Y  FF + A + +++K D    PH+RYY+RE+R   YSQ LES
Sbjct: 253 HSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLES 312

Query: 343 YKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNALYQATI 397
           Y+S+T+  MA AFGV VEFID ELSRFIAAG+LHCKIDKV  V+ETNRPDSKN  YQ TI
Sbjct: 313 YRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEVVETNRPDSKNWQYQETI 372

[Close]

BLAST of Cp4.1LG09g09850 vs. TrEMBL
Match: E5GBW6_CUCME (26S proteasome non-ATPase regulatory subunit OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 5.9e-186
Identity = 350/386 (90.67%), Postives = 356/386 (92.23%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLL HPDVQDIEKV L EEVLASVKADDM+PLYE LTG+SLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLIHPDVQDIEKVRLTEEVLASVKADDMSPLYETLTGSSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRSVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLS+FLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           ALYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 ALYQATIKQGDFLLNRIQKLSRVIDL 386

[Close]

BLAST of Cp4.1LG09g09850 vs. TrEMBL
Match: A0A0A0LRF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050170 PE=4 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 6.1e-183
Identity = 346/386 (89.64%), Postives = 353/386 (91.45%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLLTHPDVQDIEKV L EEVLASVKADDM+PLYE LT  SLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLTHPDVQDIEKVRLTEEVLASVKADDMSPLYETLTSESLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
            LDR+VL+SMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKD+ALEQ
Sbjct: 61  ALDRSVLESMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLS+FLNSLYDCQYKSFFSAFAGLTEQIKLDRYLH HFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHLHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           ALYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 ALYQATIKQGDFLLNRIQKLSRVIDL 386

[Close]

BLAST of Cp4.1LG09g09850 vs. TrEMBL
Match: A0A067K415_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11347 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 3.3e-176
Identity = 328/386 (84.97%), Postives = 348/386 (90.16%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+K FLLTHPDVQDIEKV L+EEV A+VK DDMAPLYE L    +L
Sbjct: 1   MEGQEGTQQPHLVLAHKRFLLTHPDVQDIEKVRLKEEVFAAVKDDDMAPLYETLMAEGIL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           D D++VLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDK++ALEQ
Sbjct: 61  DKDQSVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           +KVTESKTVAVG KMDLVF+TLQLGFFYMDFDLISKS                       
Sbjct: 121 MKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGK+PYLS+FLNSLY+CQYKSFFSAFAGLTEQI+LDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKIPYLSEFLNSLYECQYKSFFSAFAGLTEQIRLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI++MA AFGV+ +FIDLE+SRFIAAGKLHCKIDKVAGVLETNRPD+KN
Sbjct: 301 YSQFLESYKSVTIESMAKAFGVTADFIDLEVSRFIAAGKLHCKIDKVAGVLETNRPDAKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           ALYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 ALYQATIKQGDFLLNRIQKLSRVIDL 386

[Close]

BLAST of Cp4.1LG09g09850 vs. TrEMBL
Match: M5WMC9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006999mg PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 8.0e-175
Identity = 326/386 (84.46%), Postives = 349/386 (90.41%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEG QQPHLVLA+KLFLL+HPDVQDIEKV LREEV ASVKADDMAPLYE L   S+L
Sbjct: 1   MEGQEGPQQPHLVLAHKLFLLSHPDVQDIEKVQLREEVFASVKADDMAPLYETLVSESVL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
            LD++VLDSMRAK ++ELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDK++ALEQ
Sbjct: 61  PLDQSVLDSMRAKIQDELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVG KMDLVF+TLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAA+LFLDSISTFTTYE+FPYD FIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAADLFLDSISTFTTYEIFPYDIFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGK+PYL++FLNSLY+CQYKSFF+AFAGLTEQIKLDRYLHPHFRYYMRE+RTVV
Sbjct: 241 PEILTVIGKIPYLTEFLNSLYECQYKSFFAAFAGLTEQIKLDRYLHPHFRYYMREIRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGV+V+FIDLELSRFIAAGKLHCKIDKVAGVLETNRPD+KN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVTVDFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           +LYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 SLYQATIKQGDFLLNRIQKLSRVIDL 386

[Close]

BLAST of Cp4.1LG09g09850 vs. TrEMBL
Match: B9RAM4_RICCO (26S proteasome non-atpase regulatory subunit, putative OS=Ricinus communis GN=RCOM_1507340 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 3.4e-173
Identity = 323/386 (83.68%), Postives = 345/386 (89.38%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHL+LA+K FLLTHPDVQDIEKV L+EEV A+VK+DDMAPLYE L    LL
Sbjct: 1   MEGQEGTQQPHLILAHKRFLLTHPDVQDIEKVRLKEEVFAAVKSDDMAPLYETLITEGLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           + D+++LD MRAKNE+ELKK+DEKIADAEENLGESEVREAHLAKSLF+IRIGDK++ALEQ
Sbjct: 61  EKDQSILDLMRAKNEDELKKIDEKIADAEENLGESEVREAHLAKSLFYIRIGDKEKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVG KMDLVF+TLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNF KAA LFLDSISTFTTYELFPYDTFIFYTVLTSII+LDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFTKAATLFLDSISTFTTYELFPYDTFIFYTVLTSIITLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGK+PYLS+FLNSLY CQYKSFFSAFAG+ EQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKIPYLSEFLNSLYFCQYKSFFSAFAGIAEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGV+VEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPD+KN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVTVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           ALYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 ALYQATIKQGDFLLNRIQKLSRVIDL 386

[Close]

BLAST of Cp4.1LG09g09850 vs. TAIR10
Match: AT4G24820.1 (AT4G24820.1 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain)

HSP 1 Score: 582.0 bits (1499), Expect = 2.7e-166
Identity = 301/384 (78.39%), Postives = 338/384 (88.02%), Query Frame = 1


Query: 38  GQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLLDL 97
           G EG+QQPHL+LANKLFLLTHPDV DIEKV L+ EVL  +++  MAPLYE L  +S+LDL
Sbjct: 4   GAEGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDL 63

Query: 98  DRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQLK 157
           D+++L+SMRA NEEELKKLDEKIADAEENLGESEVREAHLAK+L+FIRI DK++ALEQLK
Sbjct: 64  DQSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLK 123

Query: 158 VTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS------------------------- 217
           +TE KTVAVG KMD+VF+TLQL FFYMDFDL+SKS                         
Sbjct: 124 LTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEG 183

Query: 218 LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPE 277
           LYCMSTRNFKKAA+LFLDSISTFTTYE+FPY+TFIFYTVLTSII+LDRVSLKQKVVDAPE
Sbjct: 184 LYCMSTRNFKKAASLFLDSISTFTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDAPE 243

Query: 278 ILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYS 337
           ILTV+GK+P+LS+FLNSLY+CQYK+FFSAFAG+  QIK DRYL+PHFR+YMREVRTVVYS
Sbjct: 244 ILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYS 303

Query: 338 QFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKNAL 397
           QFLESYKSVT++AMA AFGVSV+FID ELSRFIAAGKLHCKIDKVAGVLETNRPD+KNAL
Sbjct: 304 QFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNAL 363

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: gi|659067419|ref|XP_008439357.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Cucumis melo])

HSP 1 Score: 658.3 bits (1697), Expect = 8.5e-186
Identity = 350/386 (90.67%), Postives = 356/386 (92.23%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLL HPDVQDIEKV L EEVLASVKADDM+PLYE LTG+SLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLIHPDVQDIEKVRLTEEVLASVKADDMSPLYETLTGSSLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           DLDR+VLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ
Sbjct: 61  DLDRSVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLS+FLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           ALYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 ALYQATIKQGDFLLNRIQKLSRVIDL 386

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: gi|449469610|ref|XP_004152512.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Cucumis sativus])

HSP 1 Score: 648.3 bits (1671), Expect = 8.8e-183
Identity = 346/386 (89.64%), Postives = 353/386 (91.45%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+KLFLLTHPDVQDIEKV L EEVLASVKADDM+PLYE LT  SLL
Sbjct: 1   MEGQEGTQQPHLVLAHKLFLLTHPDVQDIEKVRLTEEVLASVKADDMSPLYETLTSESLL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
            LDR+VL+SMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKD+ALEQ
Sbjct: 61  ALDRSVLESMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGKVPYLS+FLNSLYDCQYKSFFSAFAGLTEQIKLDRYLH HFRYYMREVRTVV
Sbjct: 241 PEILTVIGKVPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHLHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           ALYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 ALYQATIKQGDFLLNRIQKLSRVIDL 386

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: gi|802648411|ref|XP_012079902.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Jatropha curcas])

HSP 1 Score: 625.9 bits (1613), Expect = 4.7e-176
Identity = 328/386 (84.97%), Postives = 348/386 (90.16%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           MEGQEGTQQPHLVLA+K FLLTHPDVQDIEKV L+EEV A+VK DDMAPLYE L    +L
Sbjct: 1   MEGQEGTQQPHLVLAHKRFLLTHPDVQDIEKVRLKEEVFAAVKDDDMAPLYETLMAEGIL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           D D++VLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDK++ALEQ
Sbjct: 61  DKDQSVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           +KVTESKTVAVG KMDLVF+TLQLGFFYMDFDLISKS                       
Sbjct: 121 MKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGK+PYLS+FLNSLY+CQYKSFFSAFAGLTEQI+LDRYLHPHFRYYMREVRTVV
Sbjct: 241 PEILTVIGKIPYLSEFLNSLYECQYKSFFSAFAGLTEQIRLDRYLHPHFRYYMREVRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI++MA AFGV+ +FIDLE+SRFIAAGKLHCKIDKVAGVLETNRPD+KN
Sbjct: 301 YSQFLESYKSVTIESMAKAFGVTADFIDLEVSRFIAAGKLHCKIDKVAGVLETNRPDAKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           ALYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 ALYQATIKQGDFLLNRIQKLSRVIDL 386

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: gi|694358157|ref|XP_009359483.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Pyrus x bretschneideri])

HSP 1 Score: 624.8 bits (1610), Expect = 1.0e-175
Identity = 327/386 (84.72%), Postives = 347/386 (89.90%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           ME QEGTQQPHLVLANKLFLL+H DV DIEKV LR+EV ASVKADDMAPLYE L   S+L
Sbjct: 1   MEAQEGTQQPHLVLANKLFLLSHSDVPDIEKVQLRDEVFASVKADDMAPLYETLVSESVL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           +LD+ V+DSMRAKN+EELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDK++ALEQ
Sbjct: 61  ELDQGVMDSMRAKNQEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVG KMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGQKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAA+LFLDSISTFTTYE+FPYD FIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAADLFLDSISTFTTYEIFPYDIFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGK+PYL++FLNSLYDCQYKSFF AFAGLTEQIKLDRYLHPHFRYYMRE+RTVV
Sbjct: 241 PEILTVIGKIPYLTEFLNSLYDCQYKSFFKAFAGLTEQIKLDRYLHPHFRYYMREIRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGV+V+FIDLELSRFIAAGKLHCKIDKVAGVLETNRPD+KN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVTVDFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           +LYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 SLYQATIKQGDFLLNRIQKLSRVIDL 386

[Close]

BLAST of Cp4.1LG09g09850 vs. NCBI nr
Match: gi|658000789|ref|XP_008392851.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Malus domestica])

HSP 1 Score: 623.2 bits (1606), Expect = 3.0e-175
Identity = 326/386 (84.46%), Postives = 346/386 (89.64%), Query Frame = 1


Query: 36  MEGQEGTQQPHLVLANKLFLLTHPDVQDIEKVNLREEVLASVKADDMAPLYEALTGNSLL 95
           ME QEGTQQPHLVLANKLFLL+H DV DIEKV LR+EV  SVKADDMAPLYE L   S+L
Sbjct: 1   MEAQEGTQQPHLVLANKLFLLSHSDVPDIEKVQLRDEVFTSVKADDMAPLYETLVSESVL 60

Query: 96  DLDRNVLDSMRAKNEEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKDRALEQ 155
           +LD+ V+DSMRAKN+EELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDK++ALEQ
Sbjct: 61  ELDQGVMDSMRAKNQEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEQ 120

Query: 156 LKVTESKTVAVGLKMDLVFHTLQLGFFYMDFDLISKS----------------------- 215
           LKVTESKTVAVG KMDLVFHTLQLGFFYMDFDLISKS                       
Sbjct: 121 LKVTESKTVAVGQKMDLVFHTLQLGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRLKVY 180

Query: 216 --LYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 275
             LYCMSTRNFKKAA+LFLDSISTFTTYE+FPYD FIFYTVLTSIISLDRVSLKQKVVDA
Sbjct: 181 EGLYCMSTRNFKKAADLFLDSISTFTTYEIFPYDIFIFYTVLTSIISLDRVSLKQKVVDA 240

Query: 276 PEILTVIGKVPYLSDFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVV 335
           PEILTVIGK+PYL++FLNSLYDCQYKSFF AFAGLTEQIKLDRYLHPHFRYYMRE+RTVV
Sbjct: 241 PEILTVIGKIPYLTEFLNSLYDCQYKSFFKAFAGLTEQIKLDRYLHPHFRYYMREIRTVV 300

Query: 336 YSQFLESYKSVTIKAMANAFGVSVEFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDSKN 395
           YSQFLESYKSVTI+AMA AFGV+V+FIDLELSRFIAAGKLHCKIDKVAGVLETNRPD+KN
Sbjct: 301 YSQFLESYKSVTIEAMAKAFGVTVDFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 360

Query: 396 ALYQATIKQGDFLLNRIQKLSRVIDL 397
           +LYQATIKQGDFLLNRIQKLSRVIDL
Sbjct: 361 SLYQATIKQGDFLLNRIQKLSRVIDL 386

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g09850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSMD6_ARATH	4.9e-165	78.39	26S proteasome non-ATPase regulatory subunit 6 homolog OS=Arabidopsis thaliana G...	[more]
PSMD6_ORYSJ	4.5e-163	78.13	26S proteasome non-ATPase regulatory subunit 6 OS=Oryza sativa subsp. japonica G...	[more]
PSMD6_HUMAN	3.1e-95	49.60	26S proteasome non-ATPase regulatory subunit 6 OS=Homo sapiens GN=PSMD6 PE=1 SV=...	[more]
PSMD6_MOUSE	5.3e-95	49.60	26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus GN=Psmd6 PE=1 SV=...	[more]
PSMD6_BOVIN	2.0e-94	49.60	26S proteasome non-ATPase regulatory subunit 6 OS=Bos taurus GN=PSMD6 PE=2 SV=1	[more]

BLAST of Cp4.1LG09g09850 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBW6_CUCME	5.9e-186	90.67	26S proteasome non-ATPase regulatory subunit OS=Cucumis melo subsp. melo PE=4 SV...	[more]
A0A0A0LRF8_CUCSA	6.1e-183	89.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050170 PE=4 SV=1	[more]
A0A067K415_JATCU	3.3e-176	84.97	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11347 PE=4 SV=1	[more]
M5WMC9_PRUPE	8.0e-175	84.46	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006999mg PE=4 SV=1	[more]
B9RAM4_RICCO	3.4e-173	83.68	26S proteasome non-atpase regulatory subunit, putative OS=Ricinus communis GN=RC...	[more]

BLAST of Cp4.1LG09g09850 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24820.1	2.7e-166	78.39	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) d...	[more]

BLAST of Cp4.1LG09g09850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067419\|ref\|XP_008439357.1\|	8.5e-186	90.67	PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Cucumis melo]	[more]
gi\|449469610\|ref\|XP_004152512.1\|	8.8e-183	89.64	PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Cucumis sativ...	[more]
gi\|802648411\|ref\|XP_012079902.1\|	4.7e-176	84.97	PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Jatropha curc...	[more]
gi\|694358157\|ref\|XP_009359483.1\|	1.0e-175	84.72	PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Pyrus x brets...	[more]
gi\|658000789\|ref\|XP_008392851.1\|	3.0e-175	84.46	PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Malus domesti...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR019585	Rpn7/CSN1
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR000717	PCI_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0051604	protein maturation
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0010090	trichome morphogenesis
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0048767	root hair elongation
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0051510	regulation of unidimensional cell growth
biological_process	GO:0051302	regulation of cell division
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0042023	DNA endoreduplication
biological_process	GO:0043090	amino acid import
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030234	enzyme regulator activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g09850.1	Cp4.1LG09g09850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 263..364 score: 2.2
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 297..380 score: 4.1
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 298..373 score: 3.2
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 292..373 score: 2.18
IPR019585	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1	PFAM	PF10602	RPN7	coord: 98..192 score: 7.8
None	No IPR available	unknown	Coil	Coil	coord: 99..133 scor
None	No IPR available	PANTHER	PTHR14145	26S PROTESOME SUBUNIT 6	coord: 36..396 score: 8.2E
None	No IPR available	PANTHER	PTHR14145:SF1	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6	coord: 36..396 score: 8.2E
None	No IPR available	SMART	SM00753	PINT	coord: 297..380 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g09850	Cucsa.391780	Cucumber (Gy14) v1	cgycpeB1034
Cp4.1LG09g09850	CmaCh13G007810	Cucurbita maxima (Rimu)	cmacpeB214
Cp4.1LG09g09850	CmoCh13G008130	Cucurbita moschata (Rifu)	cmocpeB184
Cp4.1LG09g09850	Cla002590	Watermelon (97103) v1	cpewmB025
Cp4.1LG09g09850	Csa1G050170	Cucumber (Chinese Long) v2	cpecuB029
Cp4.1LG09g09850	MELO3C002335	Melon (DHL92) v3.5.1	cpemeB026
Cp4.1LG09g09850	ClCG03G003520	Watermelon (Charleston Gray)	cpewcgB036
Cp4.1LG09g09850	CSPI01G09220	Wild cucumber (PI 183967)	cpecpiB025
Cp4.1LG09g09850	MELO3C002335.2	Melon (DHL92) v3.6.1	cpemedB031
Cp4.1LG09g09850	CsaV3_1G009320	Cucumber (Chinese Long) v3	cpecucB0031
Cp4.1LG09g09850	Bhi08G001385	Wax gourd	cpewgoB0046
Cp4.1LG09g09850	CsGy1G009240	Cucumber (Gy14) v2	cgybcpeB018
Cp4.1LG09g09850	Carg07577	Silver-seed gourd	carcpeB1396
Cp4.1LG09g09850	Carg06776	Silver-seed gourd	carcpeB0694

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG09g09850	Cp4.1LG20g03300	Cucurbita pepo (Zucchini)	cpecpeB045

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g09850	Cucurbita maxima (Rimu)	cmacpeB416
Cp4.1LG09g09850	Cucurbita moschata (Rifu)	cmocpeB377
Cp4.1LG09g09850	Bottle gourd (USVL1VR-Ls)	cpelsiB026