Cp4.1LG09g08870 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG09g08870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionphotosystem II subunit Q-2
LocationCp4.1LG09 : 8058055 .. 8059458 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAATGTTATGAGAGACAAGACAAGTACAAATCCACGTGGCGAAATTCTAGTGGCCAGGCTGGAACCTATCTTACTTGTCCAATGAAGAAGAATCAGTGAACACGTGGTATTACACAATTGGTTAAGACCATATCCAATTTATCCAACTAGAAATTTGGCAGATAAGGTGGTGTCCCCAATTACTCTGCGTCACATAACCAAATATACAAATCTGCAACTCTCCACCAATATAATTCTCAACCAAAAAAAAGAAGGTAGCTGATCATAAGCTATGGCGTCAATGGCAGGGCTATGTGGTTCCTCTCAAGCTGTGTTGGAAGGTAGCCTTCAAATCAGTGGCTCCACCCGCTTGAGTGTGGCTGGCAGCAGCAGCAGGATCTCTGTCCCCCGCTCTGGTTTGATGATCAGAGCCCAGCAAGTGCCTGCTGAGCCCGAGACCACCCGCAGGTCCGTCCTTGGCTTGGTGGCCGCCGGTCTCGCCTCCGGCTCTTTCGTTCAAGCCGTTCTCGCTGATGCTAAGCCCATCAAGCTCGGTCCCCCGCCCCCTCCCTCCGGTGGACTCCGTAAGTGCTTGACATTAAATTTACCATAACCCATCAACTTAAATAACAATGGTTTGATTCTTGCAGCTGGGACTATGAACTCGGACCAGCCACGAGACTTGGACCTGCCCTTAAAGGAGCGATTCTTCCTGCAACCACAAAGTCCAGAATTGGCTGTAGCCAGGGCGAAAGAATCAGCCAAGGATATCATCAATGTAAAAGGATCGATTGACAAGAAGGCGTGGCCGTTCGTTCGAGACGACCTTCGTCTCAAGGCGGAGTATCTCCGGTATGACCTCAAGACAATCATCTCTGCCAAGCCTAAGGAAGAGAAGCAAGCCCTTAAGGACCTCACAGGAAAGCTCTTCCAAGACATCAACAATGTGAGTGTTGTTTTATAGCTTTGAATCTTGAATTACTTGTGTTGTTTCTGACGTTTTGTTTTGAACACTTGCAGTTGGACTATGCAGCAAAGATTAAGAGCAGCTCAGAAGCAGAGAAGTATTATGCTCAGACAGTGTCGACCCTCAACGATGTCCTGTCCAAGCTCGGTTAGGAGAAGAGCGTTTGCTGTTAATGTGATGTAAGATTGTTTTGTGAACATATGCGAATGTTAAATCAACTCAATTTGGTTTCAACTCTCAACTCAATCTCTTTTCAAGTTCTTATATTGCTTTGTTTATTTTGATCTGTGCTTGATTGTCAAACATTTTAGTGTCTTGAAGTAATCTCGAGTACGGAATCAGATTTACCATAAAACGAATGACCCATGTACGAGATTCGGACTAGAATTTGAAATCTTAATTTGATACCTGGTGACCCCGACATTCTCCTACGACATGGTCTTCAATTGGTTCTAA

mRNA sequence

ACCAATGTTATGAGAGACAAGACAAGTACAAATCCACGTGGCGAAATTCTAGTGGCCAGGCTGGAACCTATCTTACTTGTCCAATGAAGAAGAATCAGTGAACACGTGGTATTACACAATTGGTTAAGACCATATCCAATTTATCCAACTAGAAATTTGGCAGATAAGGTGGTGTCCCCAATTACTCTGCGTCACATAACCAAATATACAAATCTGCAACTCTCCACCAATATAATTCTCAACCAAAAAAAAGAAGGTAGCTGATCATAAGCTATGGCGTCAATGGCAGGGCTATGTGGTTCCTCTCAAGCTGTGTTGGAAGGTAGCCTTCAAATCAGTGGCTCCACCCGCTTGAGTGTGGCTGGCAGCAGCAGCAGGATCTCTGTCCCCCGCTCTGGTTTGATGATCAGAGCCCAGCAAGTGCCTGCTGAGCCCGAGACCACCCGCAGGTCCGTCCTTGGCTTGGTGGCCGCCGGTCTCGCCTCCGGCTCTTTCGTTCAAGCCGTTCTCGCTGATGCTAAGCCCATCAAGCTCGGTCCCCCGCCCCCTCCCTCCGGTGGACTCCCTGGGACTATGAACTCGGACCAGCCACGAGACTTGGACCTGCCCTTAAAGGAGCGATTCTTCCTGCAACCACAAAGTCCAGAATTGGCTGTAGCCAGGGCGAAAGAATCAGCCAAGGATATCATCAATGTAAAAGGATCGATTGACAAGAAGGCGTGGCCGTTCGTTCGAGACGACCTTCGTCTCAAGGCGGAGTATCTCCGGTATGACCTCAAGACAATCATCTCTGCCAAGCCTAAGGAAGAGAAGCAAGCCCTTAAGGACCTCACAGGAAAGCTCTTCCAAGACATCAACAATTTGGACTATGCAGCAAAGATTAAGAGCAGCTCAGAAGCAGAGAAGTATTATGCTCAGACAGTGTCGACCCTCAACGATGTCCTGTCCAAGCTCGGTTAGGAGAAGAGCGTTTGCTGTTAATGTGATGTAAGATTGTTTTGTGAACATATGCGAATGTTAAATCAACTCAATTTGGTTTCAACTCTCAACTCAATCTCTTTTCAAGTTCTTATATTGCTTTGTTTATTTTGATCTGTGCTTGATTGTCAAACATTTTAGTGTCTTGAAGTAATCTCGAGTACGGAATCAGATTTACCATAAAACGAATGACCCATGTACGAGATTCGGACTAGAATTTGAAATCTTAATTTGATACCTGGTGACCCCGACATTCTCCTACGACATGGTCTTCAATTGGTTCTAA

Coding sequence (CDS)

ATGGCGTCAATGGCAGGGCTATGTGGTTCCTCTCAAGCTGTGTTGGAAGGTAGCCTTCAAATCAGTGGCTCCACCCGCTTGAGTGTGGCTGGCAGCAGCAGCAGGATCTCTGTCCCCCGCTCTGGTTTGATGATCAGAGCCCAGCAAGTGCCTGCTGAGCCCGAGACCACCCGCAGGTCCGTCCTTGGCTTGGTGGCCGCCGGTCTCGCCTCCGGCTCTTTCGTTCAAGCCGTTCTCGCTGATGCTAAGCCCATCAAGCTCGGTCCCCCGCCCCCTCCCTCCGGTGGACTCCCTGGGACTATGAACTCGGACCAGCCACGAGACTTGGACCTGCCCTTAAAGGAGCGATTCTTCCTGCAACCACAAAGTCCAGAATTGGCTGTAGCCAGGGCGAAAGAATCAGCCAAGGATATCATCAATGTAAAAGGATCGATTGACAAGAAGGCGTGGCCGTTCGTTCGAGACGACCTTCGTCTCAAGGCGGAGTATCTCCGGTATGACCTCAAGACAATCATCTCTGCCAAGCCTAAGGAAGAGAAGCAAGCCCTTAAGGACCTCACAGGAAAGCTCTTCCAAGACATCAACAATTTGGACTATGCAGCAAAGATTAAGAGCAGCTCAGAAGCAGAGAAGTATTATGCTCAGACAGTGTCGACCCTCAACGATGTCCTGTCCAAGCTCGGTTAG

Protein sequence

MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG
BLAST of Cp4.1LG09g08870 vs. Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 297.0 bits (759), Expect = 1.8e-79
Identity = 161/230 (70.00%), Postives = 195/230 (84.78%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISV--PRSGLMIRAQQVPAEPETTR 60
           + SMAGL G+SQAVLEGSLQI+GS RL++    SR+SV   R+GL+IRAQQ  + PE++R
Sbjct: 5   VTSMAGLRGASQAVLEGSLQINGSNRLNI----SRVSVGSQRTGLVIRAQQNVSVPESSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFF 120
           RSV+GLVAAGLA GSFV+AV A+A PIK+G PP PSGGLPGT NSDQ RD  L LK+RF+
Sbjct: 65  RSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFY 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           +QP SP  A ARAK+SAK+IINVK  IDKKAWP+V++DLRL+A YLRYDL T+ISAKPKE
Sbjct: 125 IQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKE 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           EKQ+LKDLT KLFQ I+NLDYAA+ KSS +AEKYY++TVS+LN+VL+KLG
Sbjct: 185 EKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230

BLAST of Cp4.1LG09g08870 vs. Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.4e-78
Identity = 159/229 (69.43%), Postives = 193/229 (84.28%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           MASMAGL G+SQAVLEGSLQISGS RLS   ++SR++VP+ GL IRAQQV AE ET+RR+
Sbjct: 5   MASMAGLRGASQAVLEGSLQISGSNRLS-GPTTSRVAVPKMGLNIRAQQVSAEAETSRRA 64

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPL-KERFFL 120
           +LG VAAGLASGSFV+AVLA+A+PI +GPPPP SGGLPGT NSDQ RD  LP  K+RF+L
Sbjct: 65  MLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYL 124

Query: 121 QPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEE 180
           QP  P  A  RAK SA +I+NVK  ID+KAWP +++DLRL+A YLRYDLKT+ISAKPK+E
Sbjct: 125 QPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDE 184

Query: 181 KQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           K++L++LT KLF  I+NLD+AAKIKS +EAEKYY QTVS +N+VL+KLG
Sbjct: 185 KKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKLG 232

BLAST of Cp4.1LG09g08870 vs. Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 281.2 bits (718), Expect = 1.0e-74
Identity = 161/230 (70.00%), Postives = 189/230 (82.17%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVP-RSGLMIRAQQVPAEPETTRR 60
           MASM GL G+S AVLEGSL+I+GS+RL+ +G   R++V  RS L++RAQQ     ET+RR
Sbjct: 1   MASMGGLHGASPAVLEGSLKINGSSRLNGSG---RVAVAQRSRLVVRAQQ---SEETSRR 60

Query: 61  SVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLP-GTMNSDQPRDLDLPLKERFF 120
           SV+GLVAAGLA GSFVQAVLADA  IK+GPPP PSGGLP GT NSDQ RD  L LK+RF+
Sbjct: 61  SVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFY 120

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           LQP  P  A ARAKESAKDIINVK  ID+KAWP+V++DLR KA YLRYDL TIIS+KPK+
Sbjct: 121 LQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKD 180

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           EK++LKDLT KLF  I+NLDYAAK KS S+AEKYYA+TVS LN+VL+KLG
Sbjct: 181 EKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224

BLAST of Cp4.1LG09g08870 vs. Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-66
Identity = 142/227 (62.56%), Postives = 169/227 (74.45%), Query Frame = 1

Query: 3   SMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRSVL 62
           +MA + G SQ V     Q+    R   AG  SR++V      +RA    A+ +T RR+VL
Sbjct: 4   AMASMTGLSQGV-----QLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVL 63

Query: 63  GLVAAGLASGSFVQAVLADA-KPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQP 122
           GLVA G+A G+  QA LA+A KPIKLGPPPPPSGGLPGT+NSDQ RD DLPL+ERF+LQP
Sbjct: 64  GLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQP 123

Query: 123 QSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEKQ 182
             P  A ARAKESA+DIIN+K  I+KK WPFVRDDLRL+A YLRYDLKT+I++KPK+EK+
Sbjct: 124 LPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKK 183

Query: 183 ALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
            LKDLTGKLF  I+ LD+AAKIKS  EAEKYY  T S L DVL+KLG
Sbjct: 184 GLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217

BLAST of Cp4.1LG09g08870 vs. Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-66
Identity = 142/227 (62.56%), Postives = 169/227 (74.45%), Query Frame = 1

Query: 3   SMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRSVL 62
           +MA + G SQ V     Q+    R   AG  SR++V      +RA    A+ +T RR+VL
Sbjct: 4   AMASMTGLSQGV-----QLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVL 63

Query: 63  GLVAAGLASGSFVQAVLADA-KPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQP 122
           GLVA G+A G+  QA LA+A KPIKLGPPPPPSGGLPGT+NSDQ RD DLPL+ERF+LQP
Sbjct: 64  GLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQP 123

Query: 123 QSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEKQ 182
             P  A ARAKESA+DIIN+K  I+KK WPFVRDDLRL+A YLRYDLKT+I++KPK+EK+
Sbjct: 124 LPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKK 183

Query: 183 ALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
            LKDLTGKLF  I+ LD+AAKIKS  EAEKYY  T S L DVL+KLG
Sbjct: 184 GLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217

BLAST of Cp4.1LG09g08870 vs. TrEMBL
Match: A0A0A0LUC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066480 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 7.0e-107
Identity = 208/228 (91.23%), Postives = 222/228 (97.37%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           MASMAGLCGSSQAVLEGSLQISGS+RLSVA S+ R SVPRSGL+I+AQQVP EPET+RR+
Sbjct: 5   MASMAGLCGSSQAVLEGSLQISGSSRLSVA-STIRPSVPRSGLIIKAQQVPVEPETSRRA 64

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQ 120
           VLGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGT+NSD+PRDLDLPLK+RFFLQ
Sbjct: 65  VLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTLNSDEPRDLDLPLKDRFFLQ 124

Query: 121 PQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 180
           PQSP +AVARAKESAKDIINVKG I+KKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK
Sbjct: 125 PQSPAMAVARAKESAKDIINVKGQIEKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 184

Query: 181 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSK+G
Sbjct: 185 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKIG 231

BLAST of Cp4.1LG09g08870 vs. TrEMBL
Match: F6H8B4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0904g00010 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.7e-89
Identity = 178/228 (78.07%), Postives = 202/228 (88.60%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           MASMAGL GSSQAVLEGSLQISGSTRLS +GSSSR+ V R G  +RAQQ P EPET+RR+
Sbjct: 5   MASMAGLRGSSQAVLEGSLQISGSTRLS-SGSSSRVGVARPGFSVRAQQAPVEPETSRRA 64

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQ 120
           VLGLVAAGLASGSFVQAVLA+AK IK+GPPPPPSGGLPGT+NSD+ RDLDLPLK+RFF+Q
Sbjct: 65  VLGLVAAGLASGSFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDRFFIQ 124

Query: 121 PQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 180
           P  P  A  RAKESAKDI+ VK  IDKKAWP+V+ DLRLKAEYLRYDL T+ISAKPK+EK
Sbjct: 125 PLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVISAKPKDEK 184

Query: 181 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           ++LK+LTGKLF  I++LD+AAKIKSS +AEKYYA TVSTLNDVLSK+G
Sbjct: 185 KSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 231

BLAST of Cp4.1LG09g08870 vs. TrEMBL
Match: M5WHI4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010884mg PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 3.3e-88
Identity = 170/228 (74.56%), Postives = 206/228 (90.35%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           +ASM+GL GSSQAVLEGSL +SGS+RL++A S++R++V +SG  IRAQQ PAEPET+RR+
Sbjct: 5   IASMSGLHGSSQAVLEGSLHLSGSSRLNIASSTNRLAVTKSGFAIRAQQAPAEPETSRRA 64

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQ 120
           +LGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGT+NSD+ RDLDLPLKERFF+Q
Sbjct: 65  MLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTLNSDEARDLDLPLKERFFIQ 124

Query: 121 PQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 180
           P +P  A  RAKESAK+I+ VK  IDKKAWP+V++DLRL+A YLRYDLKT+ISAK K EK
Sbjct: 125 PLTPAQAAQRAKESAKEIVAVKEYIDKKAWPYVQNDLRLRASYLRYDLKTVISAKSKTEK 184

Query: 181 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           + LK+LTGKLF+DI+NLD+AAKIKS+ EAEKYYA TVS+LNDV++KLG
Sbjct: 185 EPLKELTGKLFKDIDNLDHAAKIKSTPEAEKYYAATVSSLNDVIAKLG 232

BLAST of Cp4.1LG09g08870 vs. TrEMBL
Match: A0A061GG51_THECC (Photosystem II subunit Q-2 OS=Theobroma cacao GN=TCM_030079 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.8e-87
Identity = 172/228 (75.44%), Postives = 200/228 (87.72%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           MASMAGL GSSQAVLEGSLQ+SG TRL++AG+S R++V R G  +RAQQ P EPET RR+
Sbjct: 5   MASMAGLRGSSQAVLEGSLQLSGQTRLNIAGNS-RVAVARPGFTVRAQQAPTEPETGRRA 64

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQ 120
           VLGLVAA LA+GSFVQAVLADA+ IK+GPPPPPSGGLPGT+NSD+PRDLDLP K RF++Q
Sbjct: 65  VLGLVAASLATGSFVQAVLADARTIKVGPPPPPSGGLPGTLNSDEPRDLDLPYKNRFYIQ 124

Query: 121 PQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 180
           P SP  AVARAKESAKDI+ VK  IDKKAWP+V++DLRL A YLRYDL T+ISAK K EK
Sbjct: 125 PLSPAQAVARAKESAKDIVGVKSLIDKKAWPYVQNDLRLTASYLRYDLNTVISAKSKAEK 184

Query: 181 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           ++L++LTGKLF  I+NLD+AAKIKS+ EAEKYYAQTVSTLNDVL+KLG
Sbjct: 185 KSLQELTGKLFDTISNLDHAAKIKSTPEAEKYYAQTVSTLNDVLAKLG 231

BLAST of Cp4.1LG09g08870 vs. TrEMBL
Match: W9QPP1_9ROSA (Oxygen-evolving enhancer protein 3-2 OS=Morus notabilis GN=L484_014845 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.8e-87
Identity = 176/229 (76.86%), Postives = 202/229 (88.21%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETT-RR 60
           MASMAGL GSSQAVLEGSLQ+SGSTRL+VAG   R+SV R G  +RAQQ   EPETT RR
Sbjct: 5   MASMAGLHGSSQAVLEGSLQLSGSTRLNVAGGI-RVSVNRPGFTVRAQQGSTEPETTGRR 64

Query: 61  SVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFL 120
           ++LGLVAAGLA+GSF Q VLA+AK IK+GPPPPPSGGLPGT+NSD+PRDL+LPLKERFFL
Sbjct: 65  AMLGLVAAGLAAGSFAQVVLAEAKSIKVGPPPPPSGGLPGTLNSDEPRDLNLPLKERFFL 124

Query: 121 QPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEE 180
           QP +P  A  RAKESAKDI+ VK  IDKKAWP+V++DLRLKAEYLRYDL T+IS+KPK+E
Sbjct: 125 QPLTPAEAAQRAKESAKDIVGVKELIDKKAWPYVQNDLRLKAEYLRYDLNTVISSKPKDE 184

Query: 181 KQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           K++LK+LTGKLFQDI+NLD+AAKIKSS EAEKYYA+ VSTLN VLSKLG
Sbjct: 185 KKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAEAVSTLNSVLSKLG 232

BLAST of Cp4.1LG09g08870 vs. TAIR10
Match: AT4G05180.1 (AT4G05180.1 photosystem II subunit Q-2)

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-80
Identity = 161/230 (70.00%), Postives = 195/230 (84.78%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISV--PRSGLMIRAQQVPAEPETTR 60
           + SMAGL G+SQAVLEGSLQI+GS RL++    SR+SV   R+GL+IRAQQ  + PE++R
Sbjct: 5   VTSMAGLRGASQAVLEGSLQINGSNRLNI----SRVSVGSQRTGLVIRAQQNVSVPESSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFF 120
           RSV+GLVAAGLA GSFV+AV A+A PIK+G PP PSGGLPGT NSDQ RD  L LK+RF+
Sbjct: 65  RSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFY 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           +QP SP  A ARAK+SAK+IINVK  IDKKAWP+V++DLRL+A YLRYDL T+ISAKPKE
Sbjct: 125 IQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKE 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           EKQ+LKDLT KLFQ I+NLDYAA+ KSS +AEKYY++TVS+LN+VL+KLG
Sbjct: 185 EKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230

BLAST of Cp4.1LG09g08870 vs. TAIR10
Match: AT4G21280.2 (AT4G21280.2 photosystem II subunit QA)

HSP 1 Score: 281.2 bits (718), Expect = 5.7e-76
Identity = 161/230 (70.00%), Postives = 189/230 (82.17%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVP-RSGLMIRAQQVPAEPETTRR 60
           MASM GL G+S AVLEGSL+I+GS+RL+ +G   R++V  RS L++RAQQ     ET+RR
Sbjct: 1   MASMGGLHGASPAVLEGSLKINGSSRLNGSG---RVAVAQRSRLVVRAQQ---SEETSRR 60

Query: 61  SVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLP-GTMNSDQPRDLDLPLKERFF 120
           SV+GLVAAGLA GSFVQAVLADA  IK+GPPP PSGGLP GT NSDQ RD  L LK+RF+
Sbjct: 61  SVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFY 120

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           LQP  P  A ARAKESAKDIINVK  ID+KAWP+V++DLR KA YLRYDL TIIS+KPK+
Sbjct: 121 LQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKD 180

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           EK++LKDLT KLF  I+NLDYAAK KS S+AEKYYA+TVS LN+VL+KLG
Sbjct: 181 EKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224

BLAST of Cp4.1LG09g08870 vs. TAIR10
Match: AT3G01440.1 (AT3G01440.1 PsbQ-like 1)

HSP 1 Score: 65.1 bits (157), Expect = 6.5e-11
Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 1

Query: 130 RAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEKQALKDLTGK 189
           R K++A D++ ++  I      +V+  LRLK+ +L YD   +ISA   E+KQ L DL  +
Sbjct: 122 RVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLANR 181

Query: 190 LFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKL 228
           LF +   L+ AAK K+ +E E  Y  T   L +V++++
Sbjct: 182 LFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRM 219

BLAST of Cp4.1LG09g08870 vs. NCBI nr
Match: gi|659067857|ref|XP_008441634.1| (PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis melo])

HSP 1 Score: 404.1 bits (1037), Expect = 1.7e-109
Identity = 214/228 (93.86%), Postives = 224/228 (98.25%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           MASMAGLCGSSQAVLEGSLQISGSTRLSVA SS R SVPRSGLMI+AQQVPAEPET+RR+
Sbjct: 5   MASMAGLCGSSQAVLEGSLQISGSTRLSVA-SSIRPSVPRSGLMIKAQQVPAEPETSRRA 64

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQ 120
           VLGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGTMNSDQPRDLDLPLK+RFFLQ
Sbjct: 65  VLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTMNSDQPRDLDLPLKDRFFLQ 124

Query: 121 PQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 180
           PQSPE+AVARAKESAKDIINVKG I+KKAWPFVRDDLRLKAEYLRYDLKTIIS+KPKEEK
Sbjct: 125 PQSPEMAVARAKESAKDIINVKGQIEKKAWPFVRDDLRLKAEYLRYDLKTIISSKPKEEK 184

Query: 181 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSK+G
Sbjct: 185 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKIG 231

BLAST of Cp4.1LG09g08870 vs. NCBI nr
Match: gi|449454700|ref|XP_004145092.1| (PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis sativus])

HSP 1 Score: 394.8 bits (1013), Expect = 1.0e-106
Identity = 208/228 (91.23%), Postives = 222/228 (97.37%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           MASMAGLCGSSQAVLEGSLQISGS+RLSVA S+ R SVPRSGL+I+AQQVP EPET+RR+
Sbjct: 5   MASMAGLCGSSQAVLEGSLQISGSSRLSVA-STIRPSVPRSGLIIKAQQVPVEPETSRRA 64

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQ 120
           VLGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGT+NSD+PRDLDLPLK+RFFLQ
Sbjct: 65  VLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTLNSDEPRDLDLPLKDRFFLQ 124

Query: 121 PQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 180
           PQSP +AVARAKESAKDIINVKG I+KKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK
Sbjct: 125 PQSPAMAVARAKESAKDIINVKGQIEKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 184

Query: 181 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSK+G
Sbjct: 185 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKIG 231

BLAST of Cp4.1LG09g08870 vs. NCBI nr
Match: gi|645236730|ref|XP_008224877.1| (PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Prunus mume])

HSP 1 Score: 339.0 bits (868), Expect = 6.6e-90
Identity = 172/228 (75.44%), Postives = 208/228 (91.23%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           MASM+GL GSSQAVLEGSL +SGS+RL++A S++R++V +SG  IRAQQ PAEPET+RR+
Sbjct: 5   MASMSGLHGSSQAVLEGSLHLSGSSRLNIASSTNRLAVTKSGFAIRAQQAPAEPETSRRA 64

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQ 120
           +LGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGT+NSD+PRDLDLPLK+RFFLQ
Sbjct: 65  MLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTLNSDEPRDLDLPLKDRFFLQ 124

Query: 121 PQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 180
           P +P  A  RAK+SAK+I+ VK  IDKKAWP+V++DLRL+A YLRYDLKT+ISAKPK EK
Sbjct: 125 PLTPAQAAQRAKDSAKEIVAVKEYIDKKAWPYVQNDLRLRASYLRYDLKTVISAKPKTEK 184

Query: 181 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           + LK+LTGKLF+DI+NLD+AAKIKS+ EAEKYYA TVS+LNDV++KLG
Sbjct: 185 EPLKELTGKLFKDIDNLDHAAKIKSTPEAEKYYAATVSSLNDVIAKLG 232

BLAST of Cp4.1LG09g08870 vs. NCBI nr
Match: gi|296083535|emb|CBI23524.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 337.0 bits (863), Expect = 2.5e-89
Identity = 178/228 (78.07%), Postives = 202/228 (88.60%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           MASMAGL GSSQAVLEGSLQISGSTRLS +GSSSR+ V R G  +RAQQ P EPET+RR+
Sbjct: 1   MASMAGLRGSSQAVLEGSLQISGSTRLS-SGSSSRVGVARPGFSVRAQQAPVEPETSRRA 60

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQ 120
           VLGLVAAGLASGSFVQAVLA+AK IK+GPPPPPSGGLPGT+NSD+ RDLDLPLK+RFF+Q
Sbjct: 61  VLGLVAAGLASGSFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDRFFIQ 120

Query: 121 PQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 180
           P  P  A  RAKESAKDI+ VK  IDKKAWP+V+ DLRLKAEYLRYDL T+ISAKPK+EK
Sbjct: 121 PLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVISAKPKDEK 180

Query: 181 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           ++LK+LTGKLF  I++LD+AAKIKSS +AEKYYA TVSTLNDVLSK+G
Sbjct: 181 KSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 227

BLAST of Cp4.1LG09g08870 vs. NCBI nr
Match: gi|225469185|ref|XP_002275624.1| (PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera])

HSP 1 Score: 337.0 bits (863), Expect = 2.5e-89
Identity = 178/228 (78.07%), Postives = 202/228 (88.60%), Query Frame = 1

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSRISVPRSGLMIRAQQVPAEPETTRRS 60
           MASMAGL GSSQAVLEGSLQISGSTRLS +GSSSR+ V R G  +RAQQ P EPET+RR+
Sbjct: 5   MASMAGLRGSSQAVLEGSLQISGSTRLS-SGSSSRVGVARPGFSVRAQQAPVEPETSRRA 64

Query: 61  VLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTMNSDQPRDLDLPLKERFFLQ 120
           VLGLVAAGLASGSFVQAVLA+AK IK+GPPPPPSGGLPGT+NSD+ RDLDLPLK+RFF+Q
Sbjct: 65  VLGLVAAGLASGSFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDRFFIQ 124

Query: 121 PQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEK 180
           P  P  A  RAKESAKDI+ VK  IDKKAWP+V+ DLRLKAEYLRYDL T+ISAKPK+EK
Sbjct: 125 PLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVISAKPKDEK 184

Query: 181 QALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 229
           ++LK+LTGKLF  I++LD+AAKIKSS +AEKYYA TVSTLNDVLSK+G
Sbjct: 185 KSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PSBQ2_ARATH1.8e-7970.00Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
PSBQ_SPIOL4.4e-7869.43Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ P... [more]
PSBQ1_ARATH1.0e-7470.00Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
PSBQ_ORYSJ1.3e-6662.56Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonic... [more]
PSBQ_ORYSI1.3e-6662.56Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica ... [more]
Match NameE-valueIdentityDescription
A0A0A0LUC2_CUCSA7.0e-10791.23Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066480 PE=4 SV=1[more]
F6H8B4_VITVI1.7e-8978.07Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0904g00010 PE=4 SV=... [more]
M5WHI4_PRUPE3.3e-8874.56Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010884mg PE=4 SV=1[more]
A0A061GG51_THECC2.8e-8775.44Photosystem II subunit Q-2 OS=Theobroma cacao GN=TCM_030079 PE=4 SV=1[more]
W9QPP1_9ROSA2.8e-8776.86Oxygen-evolving enhancer protein 3-2 OS=Morus notabilis GN=L484_014845 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G05180.11.0e-8070.00 photosystem II subunit Q-2[more]
AT4G21280.25.7e-7670.00 photosystem II subunit QA[more]
AT3G01440.16.5e-1135.71 PsbQ-like 1[more]
Match NameE-valueIdentityDescription
gi|659067857|ref|XP_008441634.1|1.7e-10993.86PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis melo][more]
gi|449454700|ref|XP_004145092.1|1.0e-10691.23PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis sativus][more]
gi|645236730|ref|XP_008224877.1|6.6e-9075.44PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Prunus mume][more]
gi|296083535|emb|CBI23524.3|2.5e-8978.07unnamed protein product [Vitis vinifera][more]
gi|225469185|ref|XP_002275624.1|2.5e-8978.07PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0019898extrinsic component of membrane
GO:0009654photosystem II oxygen evolving complex
GO:0009523photosystem II
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR023222PsbQ-like_dom_sf
IPR008797PSII_PsbQ
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009523 photosystem II
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004650 polygalacturonase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g08870.1Cp4.1LG09g08870.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008797Oxygen-evolving enhancer protein 3PFAMPF05757PsbQcoord: 32..228
score: 2.4
IPR023222PsbQ-like domainGENE3DG3DSA:1.20.120.290coord: 82..227
score: 3.5
IPR023222PsbQ-like domainunknownSSF101112Oxygen-evolving enhancer protein 3,coord: 117..227
score: 1.14
NoneNo IPR availablePANTHERPTHR33399FAMILY NOT NAMEDcoord: 1..228
score: 2.9E
NoneNo IPR availablePANTHERPTHR33399:SF3OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATEDcoord: 1..228
score: 2.9E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g08870Cp4.1LG20g03890Cucurbita pepo (Zucchini)cpecpeB048