CmaCh18G003280 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G003280
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionOxygen-evolving enhancer 3, chloroplastic
LocationCma_Chr18 : 1756526 .. 1757753 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGCGTCACATAAACAAATATACAAATCTGCAACTCTCCACCAATATAATTCTCAACCAAAAAAAGAAGGTAGTTGATCATAAGCTATGGCGTCAATGGCAGGGCTATGTGGTTCCTCTCAAGCTGTGTTGGAAGGTAGCCTTCAAATCAGTGGCTCTACCCGCTTGAGTGTGGCTGGCAGCAGCAGCAGCAGCAGGCTCTCTGTCCCCCGCTCTGGTTTGATGATCAGAGCCCAGCAAGTGCCTATTGAGCCCGAGACCACCCGCAGGTCCGTCCTTGGCTTGGTGGCCGCCGGTCTCGCCTCCGGCTCTTTCGTTCAAGCCGTTCTCGCTGATGCTAAGCCCATCAAGCTCGGTCCCCCGCCCCCTCCCTCTGGTGGACTCCGTAAGTGCTCGACATTAAATTTACCATAACCCATCAACTTAAATAACAATGGTTTGATTCTTGCAGCTGGGACTTTGAACTCGGACCAGCCACGAGACTTGGACCTGCCCTTAAAGGAGCGATTCTTCCTGCAACCACAAAGTCCAGAATTGGCCGTAGCCAGGGCGAAAGAATCAGCCAAGGATATCATCAATGTAAAGGGTTCGATAGACAAGAAGGCATGGCCGTTCGTTCGAGACGACCTTCGTCTCAAGGCAGAGTATCTCCGTTATGATCTCAAGACAATCATCTCTGCCAAGCCTAAGGAAGAGAAGCAAGCCCTTAAGGACCTCACAGGAAAGCTCTTCCAAGACATCAACAATGTGAGTGTTGTTTTACAGCGTTGAATCTTGAATTACTTGTGTTGTTTCTGACGTTTTGTTTTGAACACTTGCAGTTGGACTATGCAGCAAAGATTAAGAGCAGCTCAGAAGCAGAGAAGTATTATGCTCAGACAGTGTCGACCCTCAACGATGTCCTATCCAAGCTCGGTTAGAAGAATAGCGTTTGCTGTTCATGTGATGTAAGATTGTTTTGTGAACATATGCGAATGTTATATCAACTCAATTTGGTTTCAACTCTCAGCTCAATCTCATTTCAAGTTCTTATTAGATTCGTAAGTCTTGGATCATTAGAAGAAACTGACTTGGATCTATGACCAGGTGGATTGAATTGTGTGATTATCTTTAGTGTGTTGAAGTAATCTAGGAATTAGATTTATCGTGACTCATTGTGAGATTCCACATCGTGAAGAGGAAAACAAAATACTTTATAAAGGTGTGAAAATCTCTTCCTAATATATGCG

mRNA sequence

CTGCGTCACATAAACAAATATACAAATCTGCAACTCTCCACCAATATAATTCTCAACCAAAAAAAGAAGGTAGTTGATCATAAGCTATGGCGTCAATGGCAGGGCTATGTGGTTCCTCTCAAGCTGTGTTGGAAGGTAGCCTTCAAATCAGTGGCTCTACCCGCTTGAGTGTGGCTGGCAGCAGCAGCAGCAGCAGGCTCTCTGTCCCCCGCTCTGGTTTGATGATCAGAGCCCAGCAAGTGCCTATTGAGCCCGAGACCACCCGCAGGTCCGTCCTTGGCTTGGTGGCCGCCGGTCTCGCCTCCGGCTCTTTCGTTCAAGCCGTTCTCGCTGATGCTAAGCCCATCAAGCTCGGTCCCCCGCCCCCTCCCTCTGGTGGACTCCCTGGGACTTTGAACTCGGACCAGCCACGAGACTTGGACCTGCCCTTAAAGGAGCGATTCTTCCTGCAACCACAAAGTCCAGAATTGGCCGTAGCCAGGGCGAAAGAATCAGCCAAGGATATCATCAATGTAAAGGGTTCGATAGACAAGAAGGCATGGCCGTTCGTTCGAGACGACCTTCGTCTCAAGGCAGAGTATCTCCGTTATGATCTCAAGACAATCATCTCTGCCAAGCCTAAGGAAGAGAAGCAAGCCCTTAAGGACCTCACAGGAAAGCTCTTCCAAGACATCAACAATTTGGACTATGCAGCAAAGATTAAGAGCAGCTCAGAAGCAGAGAAGTATTATGCTCAGACAGTGTCGACCCTCAACGATGTCCTATCCAAGCTCGGTTAGAAGAATAGCGTTTGCTGTTCATGTGATGTAAGATTGTTTTGTGAACATATGCGAATGTTATATCAACTCAATTTGGTTTCAACTCTCAGCTCAATCTCATTTCAAGTTCTTATTAGATTCGTAAGTCTTGGATCATTAGAAGAAACTGACTTGGATCTATGACCAGGTGGATTGAATTGTGTGATTATCTTTAGTGTGTTGAAGTAATCTAGGAATTAGATTTATCGTGACTCATTGTGAGATTCCACATCGTGAAGAGGAAAACAAAATACTTTATAAAGGTGTGAAAATCTCTTCCTAATATATGCG

Coding sequence (CDS)

ATGGCGTCAATGGCAGGGCTATGTGGTTCCTCTCAAGCTGTGTTGGAAGGTAGCCTTCAAATCAGTGGCTCTACCCGCTTGAGTGTGGCTGGCAGCAGCAGCAGCAGCAGGCTCTCTGTCCCCCGCTCTGGTTTGATGATCAGAGCCCAGCAAGTGCCTATTGAGCCCGAGACCACCCGCAGGTCCGTCCTTGGCTTGGTGGCCGCCGGTCTCGCCTCCGGCTCTTTCGTTCAAGCCGTTCTCGCTGATGCTAAGCCCATCAAGCTCGGTCCCCCGCCCCCTCCCTCTGGTGGACTCCCTGGGACTTTGAACTCGGACCAGCCACGAGACTTGGACCTGCCCTTAAAGGAGCGATTCTTCCTGCAACCACAAAGTCCAGAATTGGCCGTAGCCAGGGCGAAAGAATCAGCCAAGGATATCATCAATGTAAAGGGTTCGATAGACAAGAAGGCATGGCCGTTCGTTCGAGACGACCTTCGTCTCAAGGCAGAGTATCTCCGTTATGATCTCAAGACAATCATCTCTGCCAAGCCTAAGGAAGAGAAGCAAGCCCTTAAGGACCTCACAGGAAAGCTCTTCCAAGACATCAACAATTTGGACTATGCAGCAAAGATTAAGAGCAGCTCAGAAGCAGAGAAGTATTATGCTCAGACAGTGTCGACCCTCAACGATGTCCTATCCAAGCTCGGTTAG

Protein sequence

MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTRRSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFFLQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG
Homology
[Close]
BLAST of CmaCh18G003280 vs. Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-78
Identity = 159/230 (69.13%), Postives = 193/230 (83.91%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           + SMAGL G+SQAVLEGSLQI+GS RL+++  S  S+    R+GL+IRAQQ    PE++R
Sbjct: 5   VTSMAGLRGASQAVLEGSLQINGSNRLNISRVSVGSQ----RTGLVIRAQQNVSVPESSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           RSV+GLVAAGLA GSFV+AV A+A PIK+G PP PSGGLPGT NSDQ RD  L LK+RF+
Sbjct: 65  RSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFY 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           +QP SP  A ARAK+SAK+IINVK  IDKKAWP+V++DLRL+A YLRYDL T+ISAKPKE
Sbjct: 125 IQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKE 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EKQ+LKDLT KLFQ I+NLDYAA+ KSS +AEKYY++TVS+LN+VL+KLG
Sbjct: 185 EKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230

[Close]
BLAST of CmaCh18G003280 vs. Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.9e-77
Identity = 158/231 (68.40%), Postives = 192/231 (83.12%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASMAGL G+SQAVLEGSLQISGS RLS     ++SR++VP+ GL IRAQQV  E ET+R
Sbjct: 5   MASMAGLRGASQAVLEGSLQISGSNRLS---GPTTSRVAVPKMGLNIRAQQVSAEAETSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPL-KERF 120
           R++LG VAAGLASGSFV+AVLA+A+PI +GPPPP SGGLPGT NSDQ RD  LP  K+RF
Sbjct: 65  RAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRF 124

Query: 121 FLQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPK 180
           +LQP  P  A  RAK SA +I+NVK  ID+KAWP +++DLRL+A YLRYDLKT+ISAKPK
Sbjct: 125 YLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPK 184

Query: 181 EEKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           +EK++L++LT KLF  I+NLD+AAKIKS +EAEKYY QTVS +N+VL+KLG
Sbjct: 185 DEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKLG 232

[Close]
BLAST of CmaCh18G003280 vs. Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 278.9 bits (712), Expect = 5.1e-74
Identity = 159/231 (68.83%), Postives = 188/231 (81.39%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASM GL G+S AVLEGSL+I+GS+RL+ +G  + ++    RS L++RAQQ     ET+R
Sbjct: 1   MASMGGLHGASPAVLEGSLKINGSSRLNGSGRVAVAQ----RSRLVVRAQQ---SEETSR 60

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLP-GTLNSDQPRDLDLPLKERF 120
           RSV+GLVAAGLA GSFVQAVLADA  IK+GPPP PSGGLP GT NSDQ RD  L LK+RF
Sbjct: 61  RSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRF 120

Query: 121 FLQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPK 180
           +LQP  P  A ARAKESAKDIINVK  ID+KAWP+V++DLR KA YLRYDL TIIS+KPK
Sbjct: 121 YLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPK 180

Query: 181 EEKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           +EK++LKDLT KLF  I+NLDYAAK KS S+AEKYYA+TVS LN+VL+KLG
Sbjct: 181 DEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224

[Close]
BLAST of CmaCh18G003280 vs. Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-65
Identity = 141/231 (61.04%), Postives = 166/231 (71.86%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASM GL    Q +  G  +  G +RL+V                 +RA     + +T R
Sbjct: 5   MASMTGLSQGVQ-LPAGPRRAGGRSRLAV-----------------VRADAAAADVQTGR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADA-KPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERF 120
           R+VLGLVA G+A G+  QA LA+A KPIKLGPPPPPSGGLPGTLNSDQ RD DLPL+ERF
Sbjct: 65  RAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERF 124

Query: 121 FLQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPK 180
           +LQP  P  A ARAKESA+DIIN+K  I+KK WPFVRDDLRL+A YLRYDLKT+I++KPK
Sbjct: 125 YLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPK 184

Query: 181 EEKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           +EK+ LKDLTGKLF  I+ LD+AAKIKS  EAEKYY  T S L DVL+KLG
Sbjct: 185 DEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217

[Close]
BLAST of CmaCh18G003280 vs. Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-65
Identity = 141/231 (61.04%), Postives = 166/231 (71.86%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASM GL    Q +  G  +  G +RL+V                 +RA     + +T R
Sbjct: 5   MASMTGLSQGVQ-LPAGPRRAGGRSRLAV-----------------VRADAAAADVQTGR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADA-KPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERF 120
           R+VLGLVA G+A G+  QA LA+A KPIKLGPPPPPSGGLPGTLNSDQ RD DLPL+ERF
Sbjct: 65  RAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERF 124

Query: 121 FLQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPK 180
           +LQP  P  A ARAKESA+DIIN+K  I+KK WPFVRDDLRL+A YLRYDLKT+I++KPK
Sbjct: 125 YLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPK 184

Query: 181 EEKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           +EK+ LKDLTGKLF  I+ LD+AAKIKS  EAEKYY  T S L DVL+KLG
Sbjct: 185 DEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217

[Close]
BLAST of CmaCh18G003280 vs. TrEMBL
Match: A0A0A0LUC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066480 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.4e-107
Identity = 209/230 (90.87%), Postives = 223/230 (96.96%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASMAGLCGSSQAVLEGSLQISGS+RLSVA   S+ R SVPRSGL+I+AQQVP+EPET+R
Sbjct: 5   MASMAGLCGSSQAVLEGSLQISGSSRLSVA---STIRPSVPRSGLIIKAQQVPVEPETSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           R+VLGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGTLNSD+PRDLDLPLK+RFF
Sbjct: 65  RAVLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTLNSDEPRDLDLPLKDRFF 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           LQPQSP +AVARAKESAKDIINVKG I+KKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE
Sbjct: 125 LQPQSPAMAVARAKESAKDIINVKGQIEKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSK+G
Sbjct: 185 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKIG 231

[Close]
BLAST of CmaCh18G003280 vs. TrEMBL
Match: F6H8B4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0904g00010 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.0e-89
Identity = 179/230 (77.83%), Postives = 202/230 (87.83%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASMAGL GSSQAVLEGSLQISGSTRLS   S SSSR+ V R G  +RAQQ P+EPET+R
Sbjct: 5   MASMAGLRGSSQAVLEGSLQISGSTRLS---SGSSSRVGVARPGFSVRAQQAPVEPETSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           R+VLGLVAAGLASGSFVQAVLA+AK IK+GPPPPPSGGLPGTLNSD+ RDLDLPLK+RFF
Sbjct: 65  RAVLGLVAAGLASGSFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDRFF 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           +QP  P  A  RAKESAKDI+ VK  IDKKAWP+V+ DLRLKAEYLRYDL T+ISAKPK+
Sbjct: 125 IQPLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVISAKPKD 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EK++LK+LTGKLF  I++LD+AAKIKSS +AEKYYA TVSTLNDVLSK+G
Sbjct: 185 EKKSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 231

[Close]
BLAST of CmaCh18G003280 vs. TrEMBL
Match: M5WHI4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010884mg PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.8e-87
Identity = 172/230 (74.78%), Postives = 206/230 (89.57%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           +ASM+GL GSSQAVLEGSL +SGS+RL++A  SS++RL+V +SG  IRAQQ P EPET+R
Sbjct: 5   IASMSGLHGSSQAVLEGSLHLSGSSRLNIA--SSTNRLAVTKSGFAIRAQQAPAEPETSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           R++LGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGTLNSD+ RDLDLPLKERFF
Sbjct: 65  RAMLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTLNSDEARDLDLPLKERFF 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           +QP +P  A  RAKESAK+I+ VK  IDKKAWP+V++DLRL+A YLRYDLKT+ISAK K 
Sbjct: 125 IQPLTPAQAAQRAKESAKEIVAVKEYIDKKAWPYVQNDLRLRASYLRYDLKTVISAKSKT 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EK+ LK+LTGKLF+DI+NLD+AAKIKS+ EAEKYYA TVS+LNDV++KLG
Sbjct: 185 EKEPLKELTGKLFKDIDNLDHAAKIKSTPEAEKYYAATVSSLNDVIAKLG 232

[Close]
BLAST of CmaCh18G003280 vs. TrEMBL
Match: W9QPP1_9ROSA (Oxygen-evolving enhancer protein 3-2 OS=Morus notabilis GN=L484_014845 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 6.3e-87
Identity = 177/231 (76.62%), Postives = 202/231 (87.45%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETT- 60
           MASMAGL GSSQAVLEGSLQ+SGSTRL+VAG     R+SV R G  +RAQQ   EPETT 
Sbjct: 5   MASMAGLHGSSQAVLEGSLQLSGSTRLNVAGGI---RVSVNRPGFTVRAQQGSTEPETTG 64

Query: 61  RRSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERF 120
           RR++LGLVAAGLA+GSF Q VLA+AK IK+GPPPPPSGGLPGTLNSD+PRDL+LPLKERF
Sbjct: 65  RRAMLGLVAAGLAAGSFAQVVLAEAKSIKVGPPPPPSGGLPGTLNSDEPRDLNLPLKERF 124

Query: 121 FLQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPK 180
           FLQP +P  A  RAKESAKDI+ VK  IDKKAWP+V++DLRLKAEYLRYDL T+IS+KPK
Sbjct: 125 FLQPLTPAEAAQRAKESAKDIVGVKELIDKKAWPYVQNDLRLKAEYLRYDLNTVISSKPK 184

Query: 181 EEKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           +EK++LK+LTGKLFQDI+NLD+AAKIKSS EAEKYYA+ VSTLN VLSKLG
Sbjct: 185 DEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAEAVSTLNSVLSKLG 232

[Close]
BLAST of CmaCh18G003280 vs. TrEMBL
Match: A0A061GG51_THECC (Photosystem II subunit Q-2 OS=Theobroma cacao GN=TCM_030079 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 6.3e-87
Identity = 173/230 (75.22%), Postives = 200/230 (86.96%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASMAGL GSSQAVLEGSLQ+SG TRL++AG+S   R++V R G  +RAQQ P EPET R
Sbjct: 5   MASMAGLRGSSQAVLEGSLQLSGQTRLNIAGNS---RVAVARPGFTVRAQQAPTEPETGR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           R+VLGLVAA LA+GSFVQAVLADA+ IK+GPPPPPSGGLPGTLNSD+PRDLDLP K RF+
Sbjct: 65  RAVLGLVAASLATGSFVQAVLADARTIKVGPPPPPSGGLPGTLNSDEPRDLDLPYKNRFY 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           +QP SP  AVARAKESAKDI+ VK  IDKKAWP+V++DLRL A YLRYDL T+ISAK K 
Sbjct: 125 IQPLSPAQAVARAKESAKDIVGVKSLIDKKAWPYVQNDLRLTASYLRYDLNTVISAKSKA 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EK++L++LTGKLF  I+NLD+AAKIKS+ EAEKYYAQTVSTLNDVL+KLG
Sbjct: 185 EKKSLQELTGKLFDTISNLDHAAKIKSTPEAEKYYAQTVSTLNDVLAKLG 231

[Close]
BLAST of CmaCh18G003280 vs. TAIR10
Match: AT4G05180.1 (AT4G05180.1 photosystem II subunit Q-2)

HSP 1 Score: 293.9 bits (751), Expect = 8.6e-80
Identity = 159/230 (69.13%), Postives = 193/230 (83.91%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           + SMAGL G+SQAVLEGSLQI+GS RL+++  S  S+    R+GL+IRAQQ    PE++R
Sbjct: 5   VTSMAGLRGASQAVLEGSLQINGSNRLNISRVSVGSQ----RTGLVIRAQQNVSVPESSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           RSV+GLVAAGLA GSFV+AV A+A PIK+G PP PSGGLPGT NSDQ RD  L LK+RF+
Sbjct: 65  RSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFY 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           +QP SP  A ARAK+SAK+IINVK  IDKKAWP+V++DLRL+A YLRYDL T+ISAKPKE
Sbjct: 125 IQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKE 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EKQ+LKDLT KLFQ I+NLDYAA+ KSS +AEKYY++TVS+LN+VL+KLG
Sbjct: 185 EKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230

[Close]
BLAST of CmaCh18G003280 vs. TAIR10
Match: AT4G21280.2 (AT4G21280.2 photosystem II subunit QA)

HSP 1 Score: 278.9 bits (712), Expect = 2.9e-75
Identity = 159/231 (68.83%), Postives = 188/231 (81.39%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASM GL G+S AVLEGSL+I+GS+RL+ +G  + ++    RS L++RAQQ     ET+R
Sbjct: 1   MASMGGLHGASPAVLEGSLKINGSSRLNGSGRVAVAQ----RSRLVVRAQQ---SEETSR 60

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLP-GTLNSDQPRDLDLPLKERF 120
           RSV+GLVAAGLA GSFVQAVLADA  IK+GPPP PSGGLP GT NSDQ RD  L LK+RF
Sbjct: 61  RSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRF 120

Query: 121 FLQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPK 180
           +LQP  P  A ARAKESAKDIINVK  ID+KAWP+V++DLR KA YLRYDL TIIS+KPK
Sbjct: 121 YLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPK 180

Query: 181 EEKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           +EK++LKDLT KLF  I+NLDYAAK KS S+AEKYYA+TVS LN+VL+KLG
Sbjct: 181 DEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224

[Close]
BLAST of CmaCh18G003280 vs. TAIR10
Match: AT3G01440.1 (AT3G01440.1 PsbQ-like 1)

HSP 1 Score: 65.1 bits (157), Expect = 6.5e-11
Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 1 

Query: 132 RAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKEEKQALKDLTGK 191
           R K++A D++ ++  I      +V+  LRLK+ +L YD   +ISA   E+KQ L DL  +
Sbjct: 122 RVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLANR 181

Query: 192 LFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKL 230
           LF +   L+ AAK K+ +E E  Y  T   L +V++++
Sbjct: 182 LFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRM 219

[Close]
BLAST of CmaCh18G003280 vs. NCBI nr
Match: gi|659067857|ref|XP_008441634.1| (PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 1.9e-108
Identity = 212/230 (92.17%), Postives = 223/230 (96.96%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASMAGLCGSSQAVLEGSLQISGSTRLSVA   SS R SVPRSGLMI+AQQVP EPET+R
Sbjct: 5   MASMAGLCGSSQAVLEGSLQISGSTRLSVA---SSIRPSVPRSGLMIKAQQVPAEPETSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           R+VLGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGT+NSDQPRDLDLPLK+RFF
Sbjct: 65  RAVLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTMNSDQPRDLDLPLKDRFF 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           LQPQSPE+AVARAKESAKDIINVKG I+KKAWPFVRDDLRLKAEYLRYDLKTIIS+KPKE
Sbjct: 125 LQPQSPEMAVARAKESAKDIINVKGQIEKKAWPFVRDDLRLKAEYLRYDLKTIISSKPKE 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSK+G
Sbjct: 185 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKIG 231

[Close]
BLAST of CmaCh18G003280 vs. NCBI nr
Match: gi|449454700|ref|XP_004145092.1| (PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 3.5e-107
Identity = 209/230 (90.87%), Postives = 223/230 (96.96%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASMAGLCGSSQAVLEGSLQISGS+RLSVA   S+ R SVPRSGL+I+AQQVP+EPET+R
Sbjct: 5   MASMAGLCGSSQAVLEGSLQISGSSRLSVA---STIRPSVPRSGLIIKAQQVPVEPETSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           R+VLGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGTLNSD+PRDLDLPLK+RFF
Sbjct: 65  RAVLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTLNSDEPRDLDLPLKDRFF 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           LQPQSP +AVARAKESAKDIINVKG I+KKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE
Sbjct: 125 LQPQSPAMAVARAKESAKDIINVKGQIEKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSK+G
Sbjct: 185 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKIG 231

[Close]
BLAST of CmaCh18G003280 vs. NCBI nr
Match: gi|296083535|emb|CBI23524.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 336.3 bits (861), Expect = 4.3e-89
Identity = 179/230 (77.83%), Postives = 202/230 (87.83%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASMAGL GSSQAVLEGSLQISGSTRLS   S SSSR+ V R G  +RAQQ P+EPET+R
Sbjct: 1   MASMAGLRGSSQAVLEGSLQISGSTRLS---SGSSSRVGVARPGFSVRAQQAPVEPETSR 60

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           R+VLGLVAAGLASGSFVQAVLA+AK IK+GPPPPPSGGLPGTLNSD+ RDLDLPLK+RFF
Sbjct: 61  RAVLGLVAAGLASGSFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDRFF 120

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           +QP  P  A  RAKESAKDI+ VK  IDKKAWP+V+ DLRLKAEYLRYDL T+ISAKPK+
Sbjct: 121 IQPLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVISAKPKD 180

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EK++LK+LTGKLF  I++LD+AAKIKSS +AEKYYA TVSTLNDVLSK+G
Sbjct: 181 EKKSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 227

[Close]
BLAST of CmaCh18G003280 vs. NCBI nr
Match: gi|225469185|ref|XP_002275624.1| (PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera])

HSP 1 Score: 336.3 bits (861), Expect = 4.3e-89
Identity = 179/230 (77.83%), Postives = 202/230 (87.83%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASMAGL GSSQAVLEGSLQISGSTRLS   S SSSR+ V R G  +RAQQ P+EPET+R
Sbjct: 5   MASMAGLRGSSQAVLEGSLQISGSTRLS---SGSSSRVGVARPGFSVRAQQAPVEPETSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           R+VLGLVAAGLASGSFVQAVLA+AK IK+GPPPPPSGGLPGTLNSD+ RDLDLPLK+RFF
Sbjct: 65  RAVLGLVAAGLASGSFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDRFF 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           +QP  P  A  RAKESAKDI+ VK  IDKKAWP+V+ DLRLKAEYLRYDL T+ISAKPK+
Sbjct: 125 IQPLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVISAKPKD 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EK++LK+LTGKLF  I++LD+AAKIKSS +AEKYYA TVSTLNDVLSK+G
Sbjct: 185 EKKSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 231

[Close]
BLAST of CmaCh18G003280 vs. NCBI nr
Match: gi|645236730|ref|XP_008224877.1| (PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Prunus mume])

HSP 1 Score: 335.1 bits (858), Expect = 9.6e-89
Identity = 174/230 (75.65%), Postives = 208/230 (90.43%), Query Frame = 1 

Query: 1   MASMAGLCGSSQAVLEGSLQISGSTRLSVAGSSSSSRLSVPRSGLMIRAQQVPIEPETTR 60
           MASM+GL GSSQAVLEGSL +SGS+RL++A  SS++RL+V +SG  IRAQQ P EPET+R
Sbjct: 5   MASMSGLHGSSQAVLEGSLHLSGSSRLNIA--SSTNRLAVTKSGFAIRAQQAPAEPETSR 64

Query: 61  RSVLGLVAAGLASGSFVQAVLADAKPIKLGPPPPPSGGLPGTLNSDQPRDLDLPLKERFF 120
           R++LGLVAAGLASGSFVQAVLA+AKPIK+GPPPPPSGGLPGTLNSD+PRDLDLPLK+RFF
Sbjct: 65  RAMLGLVAAGLASGSFVQAVLAEAKPIKVGPPPPPSGGLPGTLNSDEPRDLDLPLKDRFF 124

Query: 121 LQPQSPELAVARAKESAKDIINVKGSIDKKAWPFVRDDLRLKAEYLRYDLKTIISAKPKE 180
           LQP +P  A  RAK+SAK+I+ VK  IDKKAWP+V++DLRL+A YLRYDLKT+ISAKPK 
Sbjct: 125 LQPLTPAQAAQRAKDSAKEIVAVKEYIDKKAWPYVQNDLRLRASYLRYDLKTVISAKPKT 184

Query: 181 EKQALKDLTGKLFQDINNLDYAAKIKSSSEAEKYYAQTVSTLNDVLSKLG 231
           EK+ LK+LTGKLF+DI+NLD+AAKIKS+ EAEKYYA TVS+LNDV++KLG
Sbjct: 185 EKEPLKELTGKLFKDIDNLDHAAKIKSTPEAEKYYAATVSSLNDVIAKLG 232

The following BLAST results are available for this feature:
BLAST of CmaCh18G003280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSBQ2_ARATH1.5e-7869.13Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
PSBQ_SPIOL4.9e-7768.40Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ P... [more]
PSBQ1_ARATH5.1e-7468.83Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
PSBQ_ORYSJ1.5e-6561.04Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonic... [more]
PSBQ_ORYSI1.5e-6561.04Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica ... [more]
BLAST of CmaCh18G003280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUC2_CUCSA2.4e-10790.87Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066480 PE=4 SV=1[more]
F6H8B4_VITVI3.0e-8977.83Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0904g00010 PE=4 SV=... [more]
M5WHI4_PRUPE4.8e-8774.78Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010884mg PE=4 SV=1[more]
W9QPP1_9ROSA6.3e-8776.62Oxygen-evolving enhancer protein 3-2 OS=Morus notabilis GN=L484_014845 PE=4 SV=1[more]
A0A061GG51_THECC6.3e-8775.22Photosystem II subunit Q-2 OS=Theobroma cacao GN=TCM_030079 PE=4 SV=1[more]
BLAST of CmaCh18G003280 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G05180.18.6e-8069.13 photosystem II subunit Q-2[more]
AT4G21280.22.9e-7568.83 photosystem II subunit QA[more]
AT3G01440.16.5e-1135.71 PsbQ-like 1[more]
BLAST of CmaCh18G003280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659067857|ref|XP_008441634.1|1.9e-10892.17PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis melo][more]
gi|449454700|ref|XP_004145092.1|3.5e-10790.87PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Cucumis sativus][more]
gi|296083535|emb|CBI23524.3|4.3e-8977.83unnamed protein product [Vitis vinifera][more]
gi|225469185|ref|XP_002275624.1|4.3e-8977.83PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera][more]
gi|645236730|ref|XP_008224877.1|9.6e-8975.65PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008797PSII_PsbQ
IPR023222PsbQ-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0009523photosystem II
GO:0009654photosystem II oxygen evolving complex
GO:0019898extrinsic component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009523 photosystem II
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G003280.1CmaCh18G003280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008797Oxygen-evolving enhancer protein 3PFAMPF05757PsbQcoord: 33..230
score: 4.0
IPR023222PsbQ-like domainGENE3DG3DSA:1.20.120.290coord: 84..229
score: 2.0
IPR023222PsbQ-like domainunknownSSF101112Oxygen-evolving enhancer protein 3,coord: 119..229
score: 1.16
NoneNo IPR availablePANTHERPTHR33399FAMILY NOT NAMEDcoord: 1..230
score: 1.8E
NoneNo IPR availablePANTHERPTHR33399:SF3OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATEDcoord: 1..230
score: 1.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh18G003280Cla019423Watermelon (97103) v1cmawmB367
CmaCh18G003280Csa1G066480Cucumber (Chinese Long) v2cmacuB391
CmaCh18G003280MELO3C002510Melon (DHL92) v3.5.1cmameB364
CmaCh18G003280ClCG03G005130Watermelon (Charleston Gray)cmawcgB354
CmaCh18G003280CSPI01G11230Wild cucumber (PI 183967)cmacpiB395
CmaCh18G003280CmoCh13G007250Cucurbita moschata (Rifu)cmacmoB398
CmaCh18G003280CmoCh18G003100Cucurbita moschata (Rifu)cmacmoB407
CmaCh18G003280Lsi02G006590Bottle gourd (USVL1VR-Ls)cmalsiB369
CmaCh18G003280Cp4.1LG09g08870Cucurbita pepo (Zucchini)cmacpeB415
CmaCh18G003280Cp4.1LG20g03890Cucurbita pepo (Zucchini)cmacpeB438
CmaCh18G003280MELO3C002510.2Melon (DHL92) v3.6.1cmamedB423
CmaCh18G003280CsaV3_1G011330Cucumber (Chinese Long) v3cmacucB0465
CmaCh18G003280Cla97C03G056340Watermelon (97103) v2cmawmbB413
CmaCh18G003280Bhi08G001425Wax gourdcmawgoB0530
CmaCh18G003280CsGy1G011170Cucumber (Gy14) v2cgybcmaB086
CmaCh18G003280Carg26527Silver-seed gourdcarcmaB1108
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh18G003280CmaCh13G007030Cucurbita maxima (Rimu)cmacmaB216
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G003280Cucurbita moschata (Rifu)cmacmoB385
CmaCh18G003280Cucurbita pepo (Zucchini)cmacpeB454
CmaCh18G003280Bottle gourd (USVL1VR-Ls)cmalsiB382
CmaCh18G003280Silver-seed gourdcarcmaB1244
CmaCh18G003280Cucurbita maxima (Rimu)cmacmaB043
CmaCh18G003280Cucurbita maxima (Rimu)cmacmaB392