Cp4.1LG09g05990 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g05990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSignal peptidase complex subunit, putative
LocationCp4.1LG09 : 4032209 .. 4033372 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAGCCAGACAAGGATTGAACAGAGTCGGGATAGAAATAGAAGCGAACCTCAAAACCAAACTCAGGGACAAAAAGGTAAATTACTACCTTTTTTTTTTCTTCTTTATACTGGTTGAGTAGATGCGCGAATTCAGCGGACGGCTGAGATCTTACGTCTAAATTCTTCCGAATCAGAACCGTTAAATACATACCGCTCTTCCTTTGATTTCTCAAAACAATTGACGTAGTTCTTCCGCTCATTTCCTCCGGCGGATCATTACCCTTCGAACTGCACATTGTCGTCTCCAAATTCGCCTTAAGGTTACTACTCTCTCTGATTCCCTTTATTTTGGGTTGTATCTTCTTAAATGTTTGCTCATAGCGGTATGAAACGATTTCCTTTTTTCCAAGTAGGTAGGTCTTTTCATTATAGTTAAATCTTCCTTTCGAATTCTCAGTAATTTTCCTTGACTACCTGTTTTTGATCGACGAATTATGTTCTACGCCCCTCCGCTGGTTTCGATCTGTCGATTTTCTAACATTTTTTTTTTCCATTTTTCAGATGGATTGGCAAGGGCAGAAGCTTGCGGAGCAGATGATGCAGATTATGTTGCTTGCATTTGCCGTGGGGGCCTTTTCGACTGGCTATGTTATGGGATCGTTTCGGACGATGATCTTGGTTTACGCCGGCGGTGTGATTCTCACCACGTTGATTACTGTTCCGAATTGGCCTTTCTTTAATCTCCACCCGCTCAAATGGTTGGATCCTAGTGTGGCTGAAAAATACCCTAAGCCGCAGCAGCCGGAGCCTGCGGTTTTGAAGAAGAAATCCACTAAGAAGTAGGTCTGTTCGATTTGACTTTGTTCTCGTATTAACACACAGTTTGAACCGTTGGATTACTAATTTCCCCAAAATCATGATACATACACTGTTTTTATGGATTATAATTTTGAAGTTTTAGAGAAAGACATGTCTCTTTTTTGGTTTTCGCTATTGATTTTCAGTTTATGGTTAAAATAGATTAAATCTTCATACTTTTAAGTTAATTGTCTGCTTTTCTTCCTTGGTTGTTAAGGATTTGTGGCTGTGATCATATGAATGTGAAGAGCATTTTGAAACTAAACTGAATTCATTCATCTAGAGGATGAATGTTGCATTTACAGATTGTCATCCGCACACCATT

mRNA sequence

ACCAGCCAGACAAGGATTGAACAGAGTCGGGATAGAAATAGAAGCGAACCTCAAAACCAAACTCAGGGACAAAAAGAACCGTTAAATACATACCGCTCTTCCTTTGATTTCTCAAAACAATTGACTTCTTCCGCTCATTTCCTCCGGCGGATCATTACCCTTCGAACTGCACATTGTCGTCTCCAAATTCGCCTTAAGATGGATTGGCAAGGGCAGAAGCTTGCGGAGCAGATGATGCAGATTATGTTGCTTGCATTTGCCGTGGGGGCCTTTTCGACTGGCTATGTTATGGGATCGTTTCGGACGATGATCTTGGTTTACGCCGGCGGTGTGATTCTCACCACGTTGATTACTGTTCCGAATTGGCCTTTCTTTAATCTCCACCCGCTCAAATGGTTGGATCCTAGTGTGGCTGAAAAATACCCTAAGCCGCAGCAGCCGGAGCCTGCGGTTTTGAAGAAGAAATCCACTAAGAAGTAGGTCTGTTCGATTTGACTTTGTTCTCGTATTAACACACAGTTTGAACCGTTGGATTACTAATTTCCCCAAAATCATGATACATACACTGTTTTTATGGATTATAATTTTGAAGTTTTAGAGAAAGACATGTCTCTTTTTTGGTTTTCGCTATTGATTTTCAGTTTATGGTTAAAATAGATTAAATCTTCATACTTTTAAGTTAATTGTCTGCTTTTCTTCCTTGGTTGTTAAGGATTTGTGGCTGTGATCATATGAATGTGAAGAGCATTTTGAAACTAAACTGAATTCATTCATCTAGAGGATGAATGTTGCATTTACAGATTGTCATCCGCACACCATT

Coding sequence (CDS)

ACCAGCCAGACAAGGATTGAACAGAGTCGGGATAGAAATAGAAGCGAACCTCAAAACCAAACTCAGGGACAAAAAGAACCGTTAAATACATACCGCTCTTCCTTTGATTTCTCAAAACAATTGACTTCTTCCGCTCATTTCCTCCGGCGGATCATTACCCTTCGAACTGCACATTGTCGTCTCCAAATTCGCCTTAAGATGGATTGGCAAGGGCAGAAGCTTGCGGAGCAGATGATGCAGATTATGTTGCTTGCATTTGCCGTGGGGGCCTTTTCGACTGGCTATGTTATGGGATCGTTTCGGACGATGATCTTGGTTTACGCCGGCGGTGTGATTCTCACCACGTTGATTACTGTTCCGAATTGGCCTTTCTTTAATCTCCACCCGCTCAAATGGTTGGATCCTAGTGTGGCTGAAAAATACCCTAAGCCGCAGCAGCCGGAGCCTGCGGTTTTGAAGAAGAAATCCACTAAGAAGTAG

Protein sequence

TSQTRIEQSRDRNRSEPQNQTQGQKEPLNTYRSSFDFSKQLTSSAHFLRRIITLRTAHCRLQIRLKMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK
Homology
[Close]
BLAST of Cp4.1LG09g05990 vs. Swiss-Prot
Match: SPCS1_ARATH (Probable signal peptidase complex subunit 1 OS=Arabidopsis thaliana GN=At2g22425 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.5e-28
Identity = 62/92 (67.39%), Postives = 72/92 (78.26%), Query Frame = 1 

Query: 67  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFFN 126
           MDWQGQKL EQ+MQI+L+   V A   GY   SFRTM+L+YAGGV+LTTL+TVPNWPF+N
Sbjct: 1   MDWQGQKLVEQLMQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYN 60

Query: 127 LHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTK 159
           LHPLKWLDPS AEK+PKP+    A  KK S K
Sbjct: 61  LHPLKWLDPSEAEKHPKPEVVSVASKKKFSKK 92

[Close]
BLAST of Cp4.1LG09g05990 vs. Swiss-Prot
Match: SPCS1_BOVIN (Signal peptidase complex subunit 1 OS=Bos taurus GN=SPCS1 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 66  KMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFF 125
           +MD++GQKLAEQM Q ++L  A+  F  GY+   F   + +   G   + L+T+P WP +
Sbjct: 11  QMDYKGQKLAEQMFQGIILFSAIVGFIYGYLAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 70

Query: 126 NLHPLKWL---DPSVAEKYP 143
             HPLKWL   D S  +K P
Sbjct: 71  RRHPLKWLPVQDSSTEDKKP 90

[Close]
BLAST of Cp4.1LG09g05990 vs. Swiss-Prot
Match: SPCS1_PIG (Signal peptidase complex subunit 1 OS=Sus scrofa GN=SPCS1 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 66  KMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFF 125
           +MD++GQKLAEQM Q ++L  A+  F  GYV   F   + +   G   + L+T+P WP +
Sbjct: 11  QMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 70

Query: 126 NLHPLKWL---DPSVAEKYP 143
             HPLKWL   D    +K P
Sbjct: 71  RRHPLKWLPVQDSGTEDKKP 90

[Close]
BLAST of Cp4.1LG09g05990 vs. Swiss-Prot
Match: SPCS1_HUMAN (Signal peptidase complex subunit 1 OS=Homo sapiens GN=SPCS1 PE=1 SV=4)

HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09
Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 66  KMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFF 125
           +MD++GQKLAEQM Q ++L  A+  F  GYV   F   + +   G   + L+T+P WP +
Sbjct: 11  QMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 70

Query: 126 NLHPLKWL---DPSVAEKYP 143
             HPLKWL   + S  +K P
Sbjct: 71  RRHPLKWLPVQESSTDDKKP 90

[Close]
BLAST of Cp4.1LG09g05990 vs. Swiss-Prot
Match: SPCS1_MOUSE (Signal peptidase complex subunit 1 OS=Mus musculus GN=Spcs1 PE=2 SV=3)

HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09
Identity = 37/97 (38.14%), Postives = 52/97 (53.61%), Query Frame = 1 

Query: 37  FSKQLTSSAHFLRRIITLRTAHCRLQIRLKMDWQGQKLAEQMMQIMLLAFAVGAFSTGYV 96
           F  +  SSA  L  + +L T         +MD++GQKLAEQM Q ++L  A+  F  GYV
Sbjct: 50  FRCRYRSSATMLEHLSSLPT---------QMDYKGQKLAEQMFQGIILFSAIVGFIYGYV 109

Query: 97  MGSFRTMILVYAGGVILTTLITVPNWPFFNLHPLKWL 134
              F   + +   G   + L+T+P WP +  HPLKWL
Sbjct: 110 AEQFGWTVYIVMAGFAFSCLLTLPPWPIYRRHPLKWL 137

[Close]
BLAST of Cp4.1LG09g05990 vs. TrEMBL
Match: A0A0A0KS09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589960 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.3e-35
Identity = 94/169 (55.62%), Postives = 106/169 (62.72%), Query Frame = 1 

Query: 27  PLNTYRSS--FDFSKQLT----------------SSAHFLRRII---------------- 86
           P+NTYRS   F FSK +                 S + F +R++                
Sbjct: 35  PVNTYRSPLFFGFSKAIDKILFSSRRSFPSGLHISVSEFPKRLLLSLSQFSNSFLFHLFN 94

Query: 87  --TLRTAHCRLQIRLKMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGG 146
             +L  A     +   MDWQGQKLAEQ+MQ+ML+AFAV AF TGYVMGSFR MILVYAGG
Sbjct: 95  SKSLFIARLGFSVSPGMDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGG 154

Query: 147 VILTTLITVPNWPFFNLHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK 160
           V LTTLITVPNWPFFN HPLKWLDPS+AEKYPKPQ  EP VLKKK  KK
Sbjct: 155 VFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVLKKKPAKK 203

[Close]
BLAST of Cp4.1LG09g05990 vs. TrEMBL
Match: W9S0F4_9ROSA (60S ribosomal protein L17-2 OS=Morus notabilis GN=L484_005471 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.2e-34
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 1 

Query: 6   IEQSRDRNRSEPQNQTQGQKEPLNT-YRSSFDFSKQLTSSAHFLRRIITLRTAHCRLQIR 65
           + +  +  + EP+ Q    K   ++  RS   F         F    ++ R         
Sbjct: 160 LSEKEEPVKKEPETQLATSKSKKSSALRSELAFFTDYCEKLFFFHLCLSSRFQSSPSSET 219

Query: 66  LKMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPF 125
            KMDWQGQKLAEQ+MQIMLLAFAV  F+TGYV+GSF+TM+L+YAGGV+LTTLIT+PNWPF
Sbjct: 220 GKMDWQGQKLAEQLMQIMLLAFAVVGFATGYVLGSFQTMVLIYAGGVVLTTLITIPNWPF 279

Query: 126 FNLHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK 160
           FN HPLKWLDPS AEK+PKPQ+ +P   KKKS+KK
Sbjct: 280 FNRHPLKWLDPSEAEKHPKPQRQQPVTSKKKSSKK 314

[Close]
BLAST of Cp4.1LG09g05990 vs. TrEMBL
Match: A0A166E6S7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007008 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.9e-32
Identity = 70/92 (76.09%), Postives = 80/92 (86.96%), Query Frame = 1 

Query: 67  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFFN 126
           MDWQGQKLAEQ+MQI+L+AFAV AF TGYV+GSF+ M+L+YAGGV+LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQIILVAFAVVAFFTGYVLGSFQMMLLIYAGGVVLTTLITVPNWPFFN 60

Query: 127 LHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTK 159
            HPLKWLDPSVAEK+PKPQ       KKK +K
Sbjct: 61  RHPLKWLDPSVAEKHPKPQAAAATTSKKKGSK 92

[Close]
BLAST of Cp4.1LG09g05990 vs. TrEMBL
Match: A0A059D8V0_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_B03484 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-31
Identity = 81/131 (61.83%), Postives = 96/131 (73.28%), Query Frame = 1 

Query: 31  YRSSFDFSKQLTSSAHFLRRIITLRTAHCRLQIRLKMDWQGQKLAEQMMQIMLLAFAVGA 90
           Y   F  S  L  S  F  + +    +H     R KMDWQGQKLAEQ+MQI+L+AFAV A
Sbjct: 10  YNRDFAASVSLLPSP-FSDKSVLSAVSHPVSSRRTKMDWQGQKLAEQLMQILLVAFAVVA 69

Query: 91  FSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPSVAEKYPK--PQQPE 150
           F+TGY +GSF+TMIL+YAGGV+LTTL+TVPNWPFFN HPLKWLDP  AEK+PK  PQQP 
Sbjct: 70  FATGYTIGSFQTMILIYAGGVVLTTLVTVPNWPFFNRHPLKWLDPIEAEKHPKLQPQQPS 129

Query: 151 PAVLKKKSTKK 160
            +  KKKS+KK
Sbjct: 130 SS-SKKKSSKK 138

[Close]
BLAST of Cp4.1LG09g05990 vs. TrEMBL
Match: A0A072TSU0_MEDTR (Microsomal signal peptidase 12 kDa protein OS=Medicago truncatula GN=MTR_8g080380 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.4e-31
Identity = 69/94 (73.40%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 66  KMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFF 125
           KMDW+GQKLAEQ+MQI+LLAFAV AF  GY+  SF+TMIL+YAGGVILTTL+T+PNWPFF
Sbjct: 91  KMDWEGQKLAEQLMQILLLAFAVIAFGAGYITASFQTMILIYAGGVILTTLVTIPNWPFF 150

Query: 126 NLHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK 160
           N HPLKWLDPS AEK+PKP+       KKKS KK
Sbjct: 151 NHHPLKWLDPSEAEKHPKPEPSSNVAAKKKSIKK 184

[Close]
BLAST of Cp4.1LG09g05990 vs. TAIR10
Match: AT2G22425.1 (AT2G22425.1 Microsomal signal peptidase 12 kDa subunit (SPC12))

HSP 1 Score: 125.2 bits (313), Expect = 3.7e-29
Identity = 62/92 (67.39%), Postives = 72/92 (78.26%), Query Frame = 1 

Query: 67  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFFN 126
           MDWQGQKL EQ+MQI+L+   V A   GY   SFRTM+L+YAGGV+LTTL+TVPNWPF+N
Sbjct: 1   MDWQGQKLVEQLMQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYN 60

Query: 127 LHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTK 159
           LHPLKWLDPS AEK+PKP+    A  KK S K
Sbjct: 61  LHPLKWLDPSEAEKHPKPEVVSVASKKKFSKK 92

[Close]
BLAST of Cp4.1LG09g05990 vs. TAIR10
Match: AT4G40042.1 (AT4G40042.1 Microsomal signal peptidase 12 kDa subunit (SPC12))

HSP 1 Score: 124.0 bits (310), Expect = 8.2e-29
Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 1 

Query: 67  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFFN 126
           MDWQGQKLAEQ+MQI+LL  AV +F  GY   SFR M+L+YAGGV+LTTLIT+PNWP FN
Sbjct: 1   MDWQGQKLAEQLMQILLLIAAVVSFVVGYTTASFRMMMLIYAGGVVLTTLITIPNWPCFN 60

Query: 127 LHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK 160
            H LKWLDPS AEK+PKPQ    +  KK S+KK
Sbjct: 61  RHHLKWLDPSEAEKHPKPQVVVVSSKKKSSSKK 93

[Close]
BLAST of Cp4.1LG09g05990 vs. NCBI nr
Match: gi|449435059|ref|XP_004135313.1| (PREDICTED: probable signal peptidase complex subunit 1 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 8.5e-36
Identity = 79/93 (84.95%), Postives = 83/93 (89.25%), Query Frame = 1 

Query: 67  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFFN 126
           MDWQGQKLAEQ+MQ+ML+AFAV AF TGYVMGSFR MILVYAGGV LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFN 60

Query: 127 LHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK 160
            HPLKWLDPS+AEKYPKPQ  EP VLKKK  KK
Sbjct: 61  RHPLKWLDPSLAEKYPKPQPQEPVVLKKKPAKK 93

[Close]
BLAST of Cp4.1LG09g05990 vs. NCBI nr
Match: gi|659090490|ref|XP_008446044.1| (PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo])

HSP 1 Score: 157.1 bits (396), Expect = 2.5e-35
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 1 

Query: 67  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPFFN 126
           MDWQGQKLAEQ+MQIML+AFAV AF TGYVMGSFR MILVYAGGV LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFN 60

Query: 127 LHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK 160
            HPLKWLDPS+AEKYPKPQ  EP V KKK  KK
Sbjct: 61  RHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK 93

[Close]
BLAST of Cp4.1LG09g05990 vs. NCBI nr
Match: gi|700196502|gb|KGN51679.1| (hypothetical protein Csa_5G589960 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-35
Identity = 94/169 (55.62%), Postives = 106/169 (62.72%), Query Frame = 1 

Query: 27  PLNTYRSS--FDFSKQLT----------------SSAHFLRRII---------------- 86
           P+NTYRS   F FSK +                 S + F +R++                
Sbjct: 35  PVNTYRSPLFFGFSKAIDKILFSSRRSFPSGLHISVSEFPKRLLLSLSQFSNSFLFHLFN 94

Query: 87  --TLRTAHCRLQIRLKMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGG 146
             +L  A     +   MDWQGQKLAEQ+MQ+ML+AFAV AF TGYVMGSFR MILVYAGG
Sbjct: 95  SKSLFIARLGFSVSPGMDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGG 154

Query: 147 VILTTLITVPNWPFFNLHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK 160
           V LTTLITVPNWPFFN HPLKWLDPS+AEKYPKPQ  EP VLKKK  KK
Sbjct: 155 VFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVLKKKPAKK 203

[Close]
BLAST of Cp4.1LG09g05990 vs. NCBI nr
Match: gi|703135090|ref|XP_010105796.1| (60S ribosomal protein L17-2 [Morus notabilis])

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 1 

Query: 6   IEQSRDRNRSEPQNQTQGQKEPLNT-YRSSFDFSKQLTSSAHFLRRIITLRTAHCRLQIR 65
           + +  +  + EP+ Q    K   ++  RS   F         F    ++ R         
Sbjct: 160 LSEKEEPVKKEPETQLATSKSKKSSALRSELAFFTDYCEKLFFFHLCLSSRFQSSPSSET 219

Query: 66  LKMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVPNWPF 125
            KMDWQGQKLAEQ+MQIMLLAFAV  F+TGYV+GSF+TM+L+YAGGV+LTTLIT+PNWPF
Sbjct: 220 GKMDWQGQKLAEQLMQIMLLAFAVVGFATGYVLGSFQTMVLIYAGGVVLTTLITIPNWPF 279

Query: 126 FNLHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK 160
           FN HPLKWLDPS AEK+PKPQ+ +P   KKKS+KK
Sbjct: 280 FNRHPLKWLDPSEAEKHPKPQRQQPVTSKKKSSKK 314

[Close]
BLAST of Cp4.1LG09g05990 vs. NCBI nr
Match: gi|694419053|ref|XP_009337496.1| (PREDICTED: probable signal peptidase complex subunit 1 isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-32
Identity = 69/99 (69.70%), Postives = 83/99 (83.84%), Query Frame = 1 

Query: 61  LQIRLKMDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRTMILVYAGGVILTTLITVP 120
           L++  KMDWQGQ+LAEQ+MQI+LL FAV  F+ GY+ GSF+TM L YAGGV+LTTL+TVP
Sbjct: 22  LRVHFKMDWQGQRLAEQLMQILLLVFAVVGFAAGYITGSFQTMFLTYAGGVVLTTLVTVP 81

Query: 121 NWPFFNLHPLKWLDPSVAEKYPKPQQPEPAVLKKKSTKK 160
           NWPFFN HPLKWLDPS AEK+PKPQ  +P   KKK++KK
Sbjct: 82  NWPFFNRHPLKWLDPSEAEKHPKPQPQQPVSSKKKASKK 120

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g05990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SPCS1_ARATH6.5e-2867.39Probable signal peptidase complex subunit 1 OS=Arabidopsis thaliana GN=At2g22425... [more]
SPCS1_BOVIN1.4e-0941.25Signal peptidase complex subunit 1 OS=Bos taurus GN=SPCS1 PE=3 SV=1[more]
SPCS1_PIG1.8e-0941.25Signal peptidase complex subunit 1 OS=Sus scrofa GN=SPCS1 PE=3 SV=1[more]
SPCS1_HUMAN2.3e-0941.25Signal peptidase complex subunit 1 OS=Homo sapiens GN=SPCS1 PE=1 SV=4[more]
SPCS1_MOUSE2.3e-0938.14Signal peptidase complex subunit 1 OS=Mus musculus GN=Spcs1 PE=2 SV=3[more]
BLAST of Cp4.1LG09g05990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS09_CUCSA2.3e-3555.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589960 PE=4 SV=1[more]
W9S0F4_9ROSA7.2e-3453.5560S ribosomal protein L17-2 OS=Morus notabilis GN=L484_005471 PE=3 SV=1[more]
A0A166E6S7_DAUCA8.9e-3276.09Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007008 PE=4 SV=1[more]
A0A059D8V0_EUCGR2.0e-3161.83Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_B03484 PE=4 ... [more]
A0A072TSU0_MEDTR3.4e-3173.40Microsomal signal peptidase 12 kDa protein OS=Medicago truncatula GN=MTR_8g08038... [more]
BLAST of Cp4.1LG09g05990 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G22425.13.7e-2967.39 Microsomal signal peptidase 12 kDa subunit (SPC12)[more]
AT4G40042.18.2e-2967.74 Microsomal signal peptidase 12 kDa subunit (SPC12)[more]
BLAST of Cp4.1LG09g05990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435059|ref|XP_004135313.1|8.5e-3684.95PREDICTED: probable signal peptidase complex subunit 1 [Cucumis sativus][more]
gi|659090490|ref|XP_008446044.1|2.5e-3584.95PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo][more]
gi|700196502|gb|KGN51679.1|3.2e-3555.62hypothetical protein Csa_5G589960 [Cucumis sativus][more]
gi|703135090|ref|XP_010105796.1|1.0e-3353.5560S ribosomal protein L17-2 [Morus notabilis][more]
gi|694419053|ref|XP_009337496.1|3.3e-3269.70PREDICTED: probable signal peptidase complex subunit 1 isoform X2 [Pyrus x brets... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005787signal peptidase complex
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
Vocabulary: INTERPRO
TermDefinition
IPR009542SPC12
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006465 signal peptide processing
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0005787 signal peptidase complex
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g05990.1Cp4.1LG09g05990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009542Microsomal signal peptidase 12kDa subunitPANTHERPTHR13202MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNITcoord: 47..159
score: 1.7
IPR009542Microsomal signal peptidase 12kDa subunitPFAMPF06645SPC12coord: 67..136
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g05990Cucsa.075620Cucumber (Gy14) v1cgycpeB0120
Cp4.1LG09g05990CmaCh18G007050Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g05990CmaCh04G018300Cucurbita maxima (Rimu)cmacpeB694
Cp4.1LG09g05990CmoCh04G019260Cucurbita moschata (Rifu)cmocpeB646
Cp4.1LG09g05990CmoCh18G006940Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g05990Cla022977Watermelon (97103) v1cpewmB056
Cp4.1LG09g05990Csa5G589960Cucumber (Chinese Long) v2cpecuB047
Cp4.1LG09g05990MELO3C011874Melon (DHL92) v3.5.1cpemeB021
Cp4.1LG09g05990ClCG11G013760Watermelon (Charleston Gray)cpewcgB019
Cp4.1LG09g05990CSPI05G21500Wild cucumber (PI 183967)cpecpiB042
Cp4.1LG09g05990Lsi04G006730Bottle gourd (USVL1VR-Ls)cpelsiB030
Cp4.1LG09g05990MELO3C011874.2Melon (DHL92) v3.6.1cpemedB025
Cp4.1LG09g05990CsaV3_5G030350Cucumber (Chinese Long) v3cpecucB0051
Cp4.1LG09g05990CsGy5G021020Cucumber (Gy14) v2cgybcpeB588
Cp4.1LG09g05990Carg14261Silver-seed gourdcarcpeB0341
Cp4.1LG09g05990Carg21234Silver-seed gourdcarcpeB0970
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g05990Cp4.1LG01g16230Cucurbita pepo (Zucchini)cpecpeB033
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g05990Cucurbita pepo (Zucchini)cpecpeB060
Cp4.1LG09g05990Cucumber (Gy14) v1cgycpeB1037
Cp4.1LG09g05990Cucurbita maxima (Rimu)cmacpeB167
Cp4.1LG09g05990Cucurbita moschata (Rifu)cmocpeB143
Cp4.1LG09g05990Wild cucumber (PI 183967)cpecpiB030
Cp4.1LG09g05990Cucumber (Chinese Long) v2cpecuB034
Cp4.1LG09g05990Bottle gourd (USVL1VR-Ls)cpelsiB045
Cp4.1LG09g05990Watermelon (Charleston Gray)cpewcgB054
Cp4.1LG09g05990Watermelon (97103) v1cpewmB022
Cp4.1LG09g05990Melon (DHL92) v3.5.1cpemeB037
Cp4.1LG09g05990Cucumber (Gy14) v2cgybcpeB154
Cp4.1LG09g05990Melon (DHL92) v3.6.1cpemedB043
Cp4.1LG09g05990Silver-seed gourdcarcpeB0886
Cp4.1LG09g05990Cucumber (Chinese Long) v3cpecucB0035
Cp4.1LG09g05990Wax gourdcpewgoB0032
Cp4.1LG09g05990Wax gourdcpewgoB0054