Cp4.1LG09g03770 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g03770
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Nudix hydrolase
Location	Cp4.1LG09 : 2197184 .. 2202556 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGGAATAAATGAAGCGCGGAGCGTCGATTGAACGCCAATTGGGGAGGGAAAAGGGATGGCCATAAGCCGATGTGTCGTTTTTAATCATTCACTTCTTCACTATCATCGTCGTCCTCCTTCACTTTTCTCATCTGCTCTGCGTTCGACCTCGTCATCCATGGAAGCTCCTCCCGAAGGTTACCGCAGAAACGTTGGCATTTGCCTCATCAATTCTTCTAAGAAGGTCATTCTCGAAATCTCTCTATTTCTCTACATTTTTACGAGTATTCATCCGTGATGTGGATCTGAATTCGGTATGTACAGATTTTTGCTGCCTCAAGGTTGGATATACCAGATGCTTGGCAAATGCCACAGGTAATACGATGATTTGTCTGCTTCTAGGTTATGATTATTGTTGATTGTTTTGTTTTTTTCTTTTACGGAAGTTCGAAGTTAAAGCAGCATATTTCTGAGCTTTTAATGATGAATTAGTACTTCAGTTTTCTGTTACATTGCCCGTTTTAGGGCTACGTTTGTCCAATTATCGCGTATGGATTTTATGAAGAGTTTATTCGATAAGATGTTTTCATCAAGTCTGAAATTTTTGCTTTGAAGCATAATTAAGCAGCACGGAAATGAAATGGTATCATCTACGTGTGGTCTTGAGCGTTTTGTATGTTATTCATCATGAGCTTTTCGCTCTGTTTTGCTCATTAGGGCGGCGTGGATGAGGGTGAAGATCCAAGAAGTGCAGCCATCAGAGAACTTAGAGAAGAAACAGGAGTCAGATCCGCAGAGATTATTGCTGAAGTACTATTTCTTTTATGAACTTGTTCTTACATTTTTCATGAACCTAGTTCTTCTAATTGATAAAATGAAGGAATACTGGAGAAAGATCTTGGCTGTTCAAATGAAATTAGATATCAACAGCATCCAATTTCTAAAATATTGCACTAAGTCACGTTTCTGTTTTCACAAACGGGTAAACTTGTTGCCTTTCTCGTTTTCAACTCTACCATCAAATTATAATCAATAGAATTGGTTTATCATAATTGAATCACATTTTACATTTTTTTTTTTAGGACAAACTATTTGTGCTAAGCCTTATCAACTAATGAGAAGGTCACTAGACAATCGTTTTGCTTTATAACATTCAATACCACTTGAAAGAATAACTCGTTGAATATTGAAATATCATTGTTTTCTCTTTTGTTGAGTACAACAAATGTAGAGGTATGAGTATATAAACCTCCAACCTCAAGCAAAAGAGGGCATGTCAATTATTGTCGAGGTATGCTCATTTTGATTATTGAAATACCATTGATAGACAACCTATGAGATCGCACATCGATCGGAGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAACTTCTCGCAGATGCATTTTAAACCCTTGAGGGGAAGCCCAGAAGGGAAACCCCAAAGAGGATAATATCTGCTAACAGTAGGTTTGGCCATTACAAATGGTGTCAGAGGCAATGTGCCAGTGAGGATGCTGGACCCCGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTTTTTATAAGGGTGTGGAAACCTCTCGCAGACGCATTTCAAAACCTTGAGGGGAAGCCTGGAAAGGAAAGCCTGAAGAGGACAATATCTGTTAGCAGCGGGCTTGGGCTGTTGTGACTTAAATCTAGAGTTTAAAAGTATATAAGTTTAACGTGGTTCTATGATTACTTTGCCAACCCAGTGTAACTCATTGTGGTCTTTTTCTTTAATCTCTGGAGATGGAAAACGAATAGTCTGAACTTTACTAGTGATCTTCTCAGCCCAATGACTTGGTTATTTAATATTTGTCCATCAATGTGGCTTGTTTGTTCAATGACCCTGTAGTATGATTTTTTAACGATAGGTCCTTCTGTATTAGTAGTTTTAATGTGCATACTATGTGGATTACTGAAGTTTTAATTGGGTACAATAGTGAAATGTGTTGAACATTGGTTTCTTAAAGTAGGTACCTTATTGGCTGACTTATGACTTCCCACCACATGTCCGGGAAAAACTTCGACATCAGTGGGGTTCTGACTGGAAGGGTCAAGCGCAGAAGTGGTGAGTTCTACTTTCTATTCATATAGTTCTTGTTCCTTTCATATTCTTTAGAGCGAAATCCACACTCCACATACACTGTTTTATCTGGTTTATCTGGTTATCATTAACTCAATGCCGATCCTACTAAAAAAACGAAACAATCAACCCTGTTTCCTTGTACTAACTGTTGAGTTATATTCATGTTGACGTACACCGTGTAGAATCAATGTCTTAACTATTGAGCTATGTTCATGTTGGCGTACACTGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGCATACACCTTGTAGAATAATGTCCTAACTGGTGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAACTGTTAACTGTTGAGCTATGTTCATGTTAGCGTACACCGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGCTGGCATACACCTTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTGAAGGTCACTAGACAATCGTTTTGCTTTATAACATTCAATACCACTTGAAAGAATAACTCGTTGAATATTGAAATATCATTGTTTTCTCTTTTGTTGAGTACAACAAATGTAGAGGTATGAGTATATAAACCTCCAACCTCAAGCAAAAGAGGGCATGTCAATTATTGTCGAGGTATGCTCATTTTGATTATTGAAATACCATTGATAGACAACCTATGAGATCGCACATCGATCGGAGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAACTTCTCGCAGATGCATTTTAAACCCTTGAGGGGAAGCCCAGAAGGGAAACCCCAAAGAGGATAATATCTGCTAACAGTAGGTTTGGCCATTACAAATGGTGTCAGAGGCAATGTGCCAGTGAGGATGCTGGACCCCGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTTTTTATAAGGGTGTGGAAACCTCTCGCAGACGCATTTCAAAACCTTGAGGGGAAGCCTGGAAAGGAAAGCCTGAAGAGGACAATATCTGTTAGCAGCGGGCTTGGGCTGTTGTGACTTAAATCTAGAGTTTAAAAGTATATAAGTTTAACGTGGTTCTATGATTACTTTGCCAACCCAGTGTAACTCATTGTGGTCTTTTTCTTTAATCTCTGGAGATGGAAAACGAATAGTCTGAACTTTACTAGTGATCTTCTCAGCCCAATGACTTGGTTATTTAATATTTGTCCATCAATGTGGCTTGTTTGTTCAATGACCCTGTAGTATGATTTTTTAACGATAGGTCCTTCTGTATTAGTAGTTTTAATGTGCATACTATGTGGATTACTGAAGTTTTAATTGGGTACAATAGTGAAATGTGTTGAACATTGGTTTCTTAAAGTAGGTACCTTATTGGCTGACTTATGACTTCCCACCACATGTCCGGGAAAAACTTCGACATCAGTGGGGTTCTGACTGGAAGGGTCAAGCGCAGAAGTGGTGAGTTCTACTTTCTATTCATATAGTTCTTGTTCCTTTCATATTCTTTAGAGCGAAATCCACACTCCACATACACTGTTTTATCTGGTTTATCTGGTTATCATTAACTCAATGCCGATCCTACTAAAAAAACGAAACAATCAACCCTGTTTCCTTGTACTAACTGTTGAGTTATATTCATGTTGACGTACACCGTGTAGAATCAATGTCTTAACTATTGAGCTATGTTCATGTTGGCGTACACTGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGCATACACCTTGTAGAATAATGTCCTAACTGGTGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAACTGTTAACTGTTGAGCTATGTTCATGTTAGCGTACACCGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGCTGGCATACACCTTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGCTGGCATACACCTTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGCTGGCATACACCTTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGCTGGCATACACCTTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGCTGGCATACACCTTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGCTGGCATACACCTTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGCTGGCATACACCTTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGTGTACACTGTGTAGAATCAATATTTTAACGGTTGAGCTATGTTCATGTTGGCATTAAAGATACATATATTATAAAACAAAATCCACGGCAGTGAATGGATAATAGTATTACTACTAAGATGTCCCTTGGTGTCTCTGTTAGACACCCTTTCTCTATCATTTTCTTCTCATCCTGCCAAGACCCTTTTCATTTGCCTCAATCAAATTTCAATGATATTATGCACATCTGCAACTCTTATAGCTATGTTCAAATGTTTGTAAAATTTTAGGTTTCTGCTGAAGTTGACCGGAAGCGACGAAGAGATCAATCTCTTAGGTGATGGGACTGAGAAACCCGAGTTCGGCGAATGGTCATGGATGTCACCCGAACAAGTAGTCGAACGTGTGAGTAGACACGTCATTGACATATCATTAACCAAAAGAAGCTGAGAAAAAAAAAATAATAATCTGAATACTAGTTAGATAATTCAACTTACATTCAAACTCTATCATGCAGGCTGTAGATTTCAAGAAACCTGTTTACAAAGACGTTCTAACGGTATTCAAACCCCATCTCGAGTAATTTTATTCTCTACTACAAATATTTATACTTGTCCCTTTCAATAATGTTGGTTTAATTCTTTAGTTGAATGAACTTAAGTAAAATAAAAACATGTCACAAGCTTGATTGGGGAAGTAGTCTTCCTTCTTGAATGATGGTTGGTTACAGGGTTGTGCTCTTGGAATGAGATTATTGCAAATAAGTTCATGAAGAATGCTCTTATATATTTGAGAATAATTCATGTTTTCTTCAATGGGAACAAGATTTTATACAGGTTTGAAGATGGATATTTCTCTACTGTTATTTAAATCACAATTACCGACATTATT

mRNA sequence

AGAGGAATAAATGAAGCGCGGAGCGTCGATTGAACGCCAATTGGGGAGGGAAAAGGGATGGCCATAAGCCGATGTGTCGTTTTTAATCATTCACTTCTTCACTATCATCGTCGTCCTCCTTCACTTTTCTCATCTGCTCTGCGTTCGACCTCGTCATCCATGGAAGCTCCTCCCGAAGGTTACCGCAGAAACGTTGGCATTTGCCTCATCAATTCTTCTAAGAAGATTTTTGCTGCCTCAAGGTTGGATATACCAGATGCTTGGCAAATGCCACAGGGCGGCGTGGATGAGGGTGAAGATCCAAGAAGTGCAGCCATCAGAGAACTTAGAGAAGAAACAGGAGTCAGATCCGCAGAGATTATTGCTGAAGTACCTTATTGGCTGACTTATGACTTCCCACCACATGTCCGGGAAAAACTTCGACATCAGTGGGGTTCTGACTGGAAGGGTCAAGCGCAGAAGTGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAACTGTACCTTATTGGCTGACTTATGACTTCCCACCACATGTCCGGGAAAAACTTCGACATCAGTGGGGTTCTGACTGGAAGGGTCAAGCGCAGAAGTGGTTTCTGCTGAAGTTGACCGGAAGCGACGAAGAGATCAATCTCTTAGGTGATGGGACTGAGAAACCCGAGTTCGGCGAATGGTCATGGATGTCACCCGAACAAGTAGTCGAACGTGCTGTAGATTTCAAGAAACCTGTTTACAAAGACGTTCTAACGGTATTCAAACCCCATCTCGAGTAATTTTATTCTCTACTACAAATATTTATACTTGTCCCTTTCAATAATGTTGGTTTAATTCTTTAGTTGAATGAACTTAAGTAAAATAAAAACATGTCACAAGCTTGATTGGGGAAGTAGTCTTCCTTCTTGAATGATGGTTGGTTACAGGGTTGTGCTCTTGGAATGAGATTATTGCAAATAAGTTCATGAAGAATGCTCTTATATATTTGAGAATAATTCATGTTTTCTTCAATGGGAACAAGATTTTATACAGGTTTGAAGATGGATATTTCTCTACTGTTATTTAAATCACAATTACCGACATTATT

Coding sequence (CDS)

ATGGCCATAAGCCGATGTGTCGTTTTTAATCATTCACTTCTTCACTATCATCGTCGTCCTCCTTCACTTTTCTCATCTGCTCTGCGTTCGACCTCGTCATCCATGGAAGCTCCTCCCGAAGGTTACCGCAGAAACGTTGGCATTTGCCTCATCAATTCTTCTAAGAAGATTTTTGCTGCCTCAAGGTTGGATATACCAGATGCTTGGCAAATGCCACAGGGCGGCGTGGATGAGGGTGAAGATCCAAGAAGTGCAGCCATCAGAGAACTTAGAGAAGAAACAGGAGTCAGATCCGCAGAGATTATTGCTGAAGTACCTTATTGGCTGACTTATGACTTCCCACCACATGTCCGGGAAAAACTTCGACATCAGTGGGGTTCTGACTGGAAGGGTCAAGCGCAGAAGTGA

Protein sequence

MAISRCVVFNHSLLHYHRRPPSLFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK

Homology

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BLAST of Cp4.1LG09g03770 vs. Swiss-Prot
Match: NUD26_ARATH (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-48
Identity = 91/124 (73.39%), Postives = 103/124 (83.06%), Query Frame = 1


Query: 12  SLLHYHRRPPSLFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQM 71
           SL   HR   S  SS+     SSME+PPEGYRRNVG+CL+NSSKKIF ASRLDIP AWQM
Sbjct: 33  SLPFLHRCRKSRVSSSSARCCSSMESPPEGYRRNVGVCLMNSSKKIFTASRLDIPSAWQM 92

Query: 72  PQGGVDEGEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKG 131
           PQGG+DEGEDPR A +REL+EETGV SAEI+AE P+W+TYDFPP VREKL+ +WGSDWKG
Sbjct: 93  PQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWITYDFPPDVREKLKVRWGSDWKG 152

Query: 132 QAQK 136
           QAQK
Sbjct: 153 QAQK 156

[Close]

BLAST of Cp4.1LG09g03770 vs. Swiss-Prot
Match: NUD27_ARATH (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.7e-38
Identity = 73/117 (62.39%), Postives = 92/117 (78.63%), Query Frame = 1


Query: 19  RPPSLFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDE 78
           +P  + S AL S + ++E+PP GYR+NVGICL++  +KIF AS++ IPD WQMPQGG DE
Sbjct: 39  KPLVVLSVALSSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADE 98

Query: 79  GEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           GED R+AA RELREETGV SAE IAE+P WLTYDFP  V++KL  +W + +KGQAQK
Sbjct: 99  GEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQK 155

[Close]

BLAST of Cp4.1LG09g03770 vs. Swiss-Prot
Match: NUD25_ARATH (Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.5e-37
Identity = 68/101 (67.33%), Postives = 83/101 (82.18%), Query Frame = 1


Query: 35  MEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREET 94
           ME  P GYR NVG+CLINS   +F ASRL++P AWQMPQGG+++GEDP+SAA+REL+EET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 95  GVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           GV SAEI++EVP WLTYDFPP V+ K+   WG +W GQAQK
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQK 101

[Close]

BLAST of Cp4.1LG09g03770 vs. Swiss-Prot
Match: RPPH_RHORT (RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=rppH PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-22
Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 1


Query: 42  YRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVRSAEI 101
           YR+ VGI LIN+  ++F A RLD P+AWQMPQGG+D GEDP +AA RE+ EE G R+A +
Sbjct: 14  YRQGVGIMLINARGQVFVARRLDSPEAWQMPQGGIDAGEDPETAAWREMEEEIGTRNALL 73

Query: 102 IAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           + E   WL YD P  +R +L   WG  ++GQ QK
Sbjct: 74  LGETAGWLGYDLPEELRGRL---WGGRFQGQRQK 104

[Close]

BLAST of Cp4.1LG09g03770 vs. Swiss-Prot
Match: RPPH_RHOS1 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rppH PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-21
Identity = 54/97 (55.67%), Postives = 63/97 (64.95%), Query Frame = 1


Query: 42  YRRNVGICLINSSKKIFAASRLDIP-DAWQMPQGGVDEGEDPRSAAIRELREETGV--RS 101
           YR  VGI LIN    IFA  R+D P  AWQMPQGG+DEGE PR AA+REL EETG+    
Sbjct: 12  YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAER 71

Query: 102 AEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
            E +A+ P W+TYD PP   E L   WG  ++GQ QK
Sbjct: 72  VEFVAKAPDWVTYDLPP---ELLGRVWGGKYRGQRQK 105

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BLAST of Cp4.1LG09g03770 vs. TrEMBL
Match: A0A0A0KRB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613530 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 7.5e-64
Identity = 120/136 (88.24%), Postives = 127/136 (93.38%), Query Frame = 1


Query: 1   MAISRCVVFNHSLLHYHRRPPS-LFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFA 60
           MA++RCVV +HSL HY R PP   FSSALRSTSSSMEAPPEGYR+NVGICLIN SKKIFA
Sbjct: 1   MALNRCVVLSHSLFHYRRPPPPPFFSSALRSTSSSMEAPPEGYRKNVGICLINPSKKIFA 60

Query: 61  ASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVRE 120
           ASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGV+SA+IIAEVPYW+TYDFPPHVRE
Sbjct: 61  ASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVKSADIIAEVPYWVTYDFPPHVRE 120

Query: 121 KLRHQWGSDWKGQAQK 136
           KLR QWGSDWKGQAQK
Sbjct: 121 KLRQQWGSDWKGQAQK 136

[Close]

BLAST of Cp4.1LG09g03770 vs. TrEMBL
Match: W9QL02_9ROSA (Nudix hydrolase 26 OS=Morus notabilis GN=L484_012599 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.7e-50
Identity = 96/114 (84.21%), Postives = 105/114 (92.11%), Query Frame = 1


Query: 22  SLFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGED 81
           S FSS+  S+SSSMEAPP+GYRRNVGICLIN  KKIFAASRLDIPD+WQMPQGG+DE ED
Sbjct: 64  SSFSSS--SSSSSMEAPPQGYRRNVGICLINDDKKIFAASRLDIPDSWQMPQGGIDEAED 123

Query: 82  PRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           PR+AA+RELREETGV SAEI+AE PYWLTYDFPP+VREKLRHQWG DWKGQAQK
Sbjct: 124 PRTAAVRELREETGVSSAEILAEAPYWLTYDFPPNVREKLRHQWGGDWKGQAQK 175

[Close]

BLAST of Cp4.1LG09g03770 vs. TrEMBL
Match: O04841_LUPAN (Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase OS=Lupinus angustifolius PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.7e-50
Identity = 101/140 (72.14%), Postives = 112/140 (80.00%), Query Frame = 1


Query: 1   MAISRCVVFNHSLLHYHRRPP-----SLFSSALRSTSSSMEAPPEGYRRNVGICLINSSK 60
           MA+ R V    +  H+ + P      S  S A R   SSM++PPEGYRRNVGICL+N+ K
Sbjct: 1   MALCRLVQSPPTNFHFRKYPSKFLKFSSLSLAFRYCHSSMDSPPEGYRRNVGICLMNNDK 60

Query: 61  KIFAASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPP 120
           KIFAASRLDIPDAWQMPQGG+DEGEDPR+AAIRELREETGV SAE+IAEVPYWLTYDFPP
Sbjct: 61  KIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPP 120

Query: 121 HVREKLRHQWGSDWKGQAQK 136
            VREKL  QWGSDWKGQAQK
Sbjct: 121 KVREKLNIQWGSDWKGQAQK 140

[Close]

BLAST of Cp4.1LG09g03770 vs. TrEMBL
Match: A0A0D2V0L7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G019900 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.0e-49
Identity = 93/111 (83.78%), Postives = 103/111 (92.79%), Query Frame = 1


Query: 25  SSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGEDPRS 84
           SS   S+SSSMEAPP+GYRRNVGICLINSSKKIF+ASRLDIP AWQMPQGG+D+ EDP+ 
Sbjct: 30  SSCTCSSSSSMEAPPQGYRRNVGICLINSSKKIFSASRLDIPSAWQMPQGGIDDNEDPKV 89

Query: 85  AAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           AA+REL+EETGV SAEI+AEVPYWLTYDFPP VREKL+HQWGSDWKGQAQK
Sbjct: 90  AALRELKEETGVSSAEILAEVPYWLTYDFPPEVREKLKHQWGSDWKGQAQK 140

[Close]

BLAST of Cp4.1LG09g03770 vs. TrEMBL
Match: A0A0D2TH46_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G019900 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.0e-49
Identity = 93/111 (83.78%), Postives = 103/111 (92.79%), Query Frame = 1


Query: 25  SSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGEDPRS 84
           SS   S+SSSMEAPP+GYRRNVGICLINSSKKIF+ASRLDIP AWQMPQGG+D+ EDP+ 
Sbjct: 30  SSCTCSSSSSMEAPPQGYRRNVGICLINSSKKIFSASRLDIPSAWQMPQGGIDDNEDPKV 89

Query: 85  AAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           AA+REL+EETGV SAEI+AEVPYWLTYDFPP VREKL+HQWGSDWKGQAQK
Sbjct: 90  AALRELKEETGVSSAEILAEVPYWLTYDFPPEVREKLKHQWGSDWKGQAQK 140

[Close]

BLAST of Cp4.1LG09g03770 vs. TAIR10
Match: AT3G10620.1 (AT3G10620.1 nudix hydrolase homolog 26)

HSP 1 Score: 193.4 bits (490), Expect = 9.3e-50
Identity = 91/124 (73.39%), Postives = 103/124 (83.06%), Query Frame = 1


Query: 12  SLLHYHRRPPSLFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQM 71
           SL   HR   S  SS+     SSME+PPEGYRRNVG+CL+NSSKKIF ASRLDIP AWQM
Sbjct: 33  SLPFLHRCRKSRVSSSSARCCSSMESPPEGYRRNVGVCLMNSSKKIFTASRLDIPSAWQM 92

Query: 72  PQGGVDEGEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKG 131
           PQGG+DEGEDPR A +REL+EETGV SAEI+AE P+W+TYDFPP VREKL+ +WGSDWKG
Sbjct: 93  PQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWITYDFPPDVREKLKVRWGSDWKG 152

Query: 132 QAQK 136
           QAQK
Sbjct: 153 QAQK 156

[Close]

BLAST of Cp4.1LG09g03770 vs. TAIR10
Match: AT5G06340.1 (AT5G06340.1 nudix hydrolase homolog 27)

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-39
Identity = 73/117 (62.39%), Postives = 92/117 (78.63%), Query Frame = 1


Query: 19  RPPSLFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDE 78
           +P  + S AL S + ++E+PP GYR+NVGICL++  +KIF AS++ IPD WQMPQGG DE
Sbjct: 39  KPLVVLSVALSSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADE 98

Query: 79  GEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           GED R+AA RELREETGV SAE IAE+P WLTYDFP  V++KL  +W + +KGQAQK
Sbjct: 99  GEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQK 155

[Close]

BLAST of Cp4.1LG09g03770 vs. TAIR10
Match: AT1G30110.1 (AT1G30110.1 nudix hydrolase homolog 25)

HSP 1 Score: 154.8 bits (390), Expect = 3.7e-38
Identity = 68/101 (67.33%), Postives = 83/101 (82.18%), Query Frame = 1


Query: 35  MEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREET 94
           ME  P GYR NVG+CLINS   +F ASRL++P AWQMPQGG+++GEDP+SAA+REL+EET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 95  GVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           GV SAEI++EVP WLTYDFPP V+ K+   WG +W GQAQK
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQK 101

[Close]

BLAST of Cp4.1LG09g03770 vs. NCBI nr
Match: gi|449434516|ref|XP_004135042.1| (PREDICTED: nudix hydrolase 26, chloroplastic [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-63
Identity = 120/136 (88.24%), Postives = 127/136 (93.38%), Query Frame = 1


Query: 1   MAISRCVVFNHSLLHYHRRPPS-LFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFA 60
           MA++RCVV +HSL HY R PP   FSSALRSTSSSMEAPPEGYR+NVGICLIN SKKIFA
Sbjct: 1   MALNRCVVLSHSLFHYRRPPPPPFFSSALRSTSSSMEAPPEGYRKNVGICLINPSKKIFA 60

Query: 61  ASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVRE 120
           ASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGV+SA+IIAEVPYW+TYDFPPHVRE
Sbjct: 61  ASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVKSADIIAEVPYWVTYDFPPHVRE 120

Query: 121 KLRHQWGSDWKGQAQK 136
           KLR QWGSDWKGQAQK
Sbjct: 121 KLRQQWGSDWKGQAQK 136

[Close]

BLAST of Cp4.1LG09g03770 vs. NCBI nr
Match: gi|659091817|ref|XP_008446748.1| (PREDICTED: nudix hydrolase 26, chloroplastic [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 2.6e-62
Identity = 119/135 (88.15%), Postives = 126/135 (93.33%), Query Frame = 1


Query: 1   MAISRCVVFNHSLLHYHRRPPSLFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAA 60
           MA++R VVF+HSL HY RRPP  FSSALRSTSSSMEAPP GYR+NVGICLIN SKKIFAA
Sbjct: 1   MALNRYVVFSHSLFHY-RRPPPFFSSALRSTSSSMEAPPAGYRKNVGICLINPSKKIFAA 60

Query: 61  SRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREK 120
           SRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGV+SA+IIAEVPYW+TYDFPP VREK
Sbjct: 61  SRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVKSADIIAEVPYWVTYDFPPQVREK 120

Query: 121 LRHQWGSDWKGQAQK 136
           LR QWGSDWKGQAQK
Sbjct: 121 LRQQWGSDWKGQAQK 134

[Close]

BLAST of Cp4.1LG09g03770 vs. NCBI nr
Match: gi|1009119731|ref|XP_015876538.1| (PREDICTED: nudix hydrolase 26, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 211.8 bits (538), Expect = 7.2e-52
Identity = 100/114 (87.72%), Postives = 105/114 (92.11%), Query Frame = 1


Query: 22  SLFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGED 81
           S  SS   S+SSSMEAPPEGYRRNVG+CLIN SKKIFAASRLDIP AWQMPQGG+DEGED
Sbjct: 68  SASSSPSSSSSSSMEAPPEGYRRNVGVCLINDSKKIFAASRLDIPSAWQMPQGGIDEGED 127

Query: 82  PRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           PR+AAIRELREETGV SAEI+AEVPYWLTYDFPP VREKLRHQWGSDWKGQAQK
Sbjct: 128 PRTAAIRELREETGVNSAEILAEVPYWLTYDFPPAVREKLRHQWGSDWKGQAQK 181

[Close]

BLAST of Cp4.1LG09g03770 vs. NCBI nr
Match: gi|1888557|gb|AAC49902.1| (diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase [Lupinus angustifolius])

HSP 1 Score: 205.3 bits (521), Expect = 6.7e-50
Identity = 101/140 (72.14%), Postives = 112/140 (80.00%), Query Frame = 1


Query: 1   MAISRCVVFNHSLLHYHRRPP-----SLFSSALRSTSSSMEAPPEGYRRNVGICLINSSK 60
           MA+ R V    +  H+ + P      S  S A R   SSM++PPEGYRRNVGICL+N+ K
Sbjct: 1   MALCRLVQSPPTNFHFRKYPSKFLKFSSLSLAFRYCHSSMDSPPEGYRRNVGICLMNNDK 60

Query: 61  KIFAASRLDIPDAWQMPQGGVDEGEDPRSAAIRELREETGVRSAEIIAEVPYWLTYDFPP 120
           KIFAASRLDIPDAWQMPQGG+DEGEDPR+AAIRELREETGV SAE+IAEVPYWLTYDFPP
Sbjct: 61  KIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPP 120

Query: 121 HVREKLRHQWGSDWKGQAQK 136
            VREKL  QWGSDWKGQAQK
Sbjct: 121 KVREKLNIQWGSDWKGQAQK 140

[Close]

BLAST of Cp4.1LG09g03770 vs. NCBI nr
Match: gi|703077052|ref|XP_010090492.1| (Nudix hydrolase 26 [Morus notabilis])

HSP 1 Score: 205.3 bits (521), Expect = 6.7e-50
Identity = 96/114 (84.21%), Postives = 105/114 (92.11%), Query Frame = 1


Query: 22  SLFSSALRSTSSSMEAPPEGYRRNVGICLINSSKKIFAASRLDIPDAWQMPQGGVDEGED 81
           S FSS+  S+SSSMEAPP+GYRRNVGICLIN  KKIFAASRLDIPD+WQMPQGG+DE ED
Sbjct: 64  SSFSSS--SSSSSMEAPPQGYRRNVGICLINDDKKIFAASRLDIPDSWQMPQGGIDEAED 123

Query: 82  PRSAAIRELREETGVRSAEIIAEVPYWLTYDFPPHVREKLRHQWGSDWKGQAQK 136
           PR+AA+RELREETGV SAEI+AE PYWLTYDFPP+VREKLRHQWG DWKGQAQK
Sbjct: 124 PRTAAVRELREETGVSSAEILAEAPYWLTYDFPPNVREKLRHQWGGDWKGQAQK 175

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g03770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NUD26_ARATH	1.7e-48	73.39	Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26 PE=1 SV=1	[more]
NUD27_ARATH	2.7e-38	62.39	Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27 PE=1 SV=1	[more]
NUD25_ARATH	6.5e-37	67.33	Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1	[more]
RPPH_RHORT	1.6e-22	53.19	RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1...	[more]
RPPH_RHOS1	2.9e-21	55.67	RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4...	[more]

BLAST of Cp4.1LG09g03770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRB9_CUCSA	7.5e-64	88.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613530 PE=3 SV=1	[more]
W9QL02_9ROSA	4.7e-50	84.21	Nudix hydrolase 26 OS=Morus notabilis GN=L484_012599 PE=3 SV=1	[more]
O04841_LUPAN	4.7e-50	72.14	Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase OS=Lupinus angustifolius PE=1...	[more]
A0A0D2V0L7_GOSRA	3.0e-49	83.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G019900 PE=3 SV=1	[more]
A0A0D2TH46_GOSRA	3.0e-49	83.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G019900 PE=3 SV=1	[more]

BLAST of Cp4.1LG09g03770 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10620.1	9.3e-50	73.39	nudix hydrolase homolog 26	[more]
AT5G06340.1	1.5e-39	62.39	nudix hydrolase homolog 27	[more]
AT1G30110.1	3.7e-38	67.33	nudix hydrolase homolog 25	[more]

BLAST of Cp4.1LG09g03770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434516\|ref\|XP_004135042.1\|	1.1e-63	88.24	PREDICTED: nudix hydrolase 26, chloroplastic [Cucumis sativus]	[more]
gi\|659091817\|ref\|XP_008446748.1\|	2.6e-62	88.15	PREDICTED: nudix hydrolase 26, chloroplastic [Cucumis melo]	[more]
gi\|1009119731\|ref\|XP_015876538.1\|	7.2e-52	87.72	PREDICTED: nudix hydrolase 26, chloroplastic [Ziziphus jujuba]	[more]
gi\|1888557\|gb\|AAC49902.1\|	6.7e-50	72.14	diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase [Lupinus angustifolius]	[more]
gi\|703077052\|ref\|XP_010090492.1\|	6.7e-50	84.21	Nudix hydrolase 26 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR020476	Nudix_hydrolase
IPR020084	NUDIX_hydrolase_CS
IPR015797	NUDIX_hydrolase-like_dom_sf
IPR000086	NUDIX_hydrolase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process	GO:0006753	nucleoside phosphate metabolic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0034432	bis(5'-adenosyl)-pentaphosphatase activity
molecular_function	GO:0004081	bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity
molecular_function	GO:0008893	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g03770.1	Cp4.1LG09g03770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 42..131 score: 1.8
IPR000086	NUDIX hydrolase domain	PROFILE	PS51462	NUDIX	coord: 41..135 score: 14
IPR015797	NUDIX hydrolase domain-like	GENE3D	G3DSA:3.90.79.10		coord: 40..130 score: 2.6
IPR015797	NUDIX hydrolase domain-like	unknown	SSF55811	Nudix	coord: 38..133 score: 7.31
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 74..95 scor
IPR020476	NUDIX hydrolase	PRINTS	PR00502	NUDIXFAMILY	coord: 83..98 score: 6.0E-7coord: 69..83 score: 6.
None	No IPR available	PANTHER	PTHR11839	UDP/ADP-SUGAR PYROPHOSPHATASE	coord: 18..135 score: 1.4
None	No IPR available	PANTHER	PTHR11839:SF13	NUDIX HYDROLASE 26, CHLOROPLASTIC	coord: 18..135 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g03770	Cucsa.282730	Cucumber (Gy14) v1	cgycpeB0745
Cp4.1LG09g03770	CmaCh18G009560	Cucurbita maxima (Rimu)	cmacpeB415
Cp4.1LG09g03770	CmoCh18G009570	Cucurbita moschata (Rifu)	cmocpeB376
Cp4.1LG09g03770	Cla020479	Watermelon (97103) v1	cpewmB031
Cp4.1LG09g03770	Csa5G613530	Cucumber (Chinese Long) v2	cpecuB041
Cp4.1LG09g03770	MELO3C012337	Melon (DHL92) v3.5.1	cpemeB024
Cp4.1LG09g03770	ClCG05G021910	Watermelon (Charleston Gray)	cpewcgB045
Cp4.1LG09g03770	CSPI05G26190	Wild cucumber (PI 183967)	cpecpiB036
Cp4.1LG09g03770	Lsi04G001600	Bottle gourd (USVL1VR-Ls)	cpelsiB032
Cp4.1LG09g03770	MELO3C012337.2	Melon (DHL92) v3.6.1	cpemedB028
Cp4.1LG09g03770	CsaV3_5G035230	Cucumber (Chinese Long) v3	cpecucB0043
Cp4.1LG09g03770	Bhi07G000624	Wax gourd	cpewgoB0055
Cp4.1LG09g03770	CsGy5G025670	Cucumber (Gy14) v2	cgybcpeB581
Cp4.1LG09g03770	Carg18999	Silver-seed gourd	carcpeB1464

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g03770	Cucurbita pepo (Zucchini)	cpecpeB040
Cp4.1LG09g03770	Cucurbita maxima (Rimu)	cmacpeB700
Cp4.1LG09g03770	Cucurbita moschata (Rifu)	cmocpeB651
Cp4.1LG09g03770	Silver-seed gourd	carcpeB1169