CmoCh18G009570 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCGCGGAGCGTCGATTGAACGCCAATTGGGGGTGGGAAAAGGGATGGCCATAAGCCGATGTGTCGTCTTTAATCACTCACTTCTTCACTATCATCGTCGTCCTCCTTCACTTTTCTCATCTGCCCTGCGTTCGACCTCGTCATCCATGGAAGCTCCTCCCGAAGGTTACCGCAGAAACGTTGGCATTTGCCTCATCAATTCTTCTAAGAAGGTCATTCTCGAAATCTCTCTATTTCTCTACATTTTTACGAGTATTCATCCGTGACGTGGATCTGAATTCGGTATGTACAGATTTTTGCTGCCTCAAGGTTGGATATACCAGATGCTTGGCAAATGCCACAGGTAATACGATGATTTGTCTGCTTCTAGGTTATGATTATTGTTGATTGTTTTGTTTTTTTTCTTACGGAAGTTCGAAGTTAAAGCAGCATATTTCTGAGCTTTTAATGATGAATTAGTACTTGAGTTTTCTCTTACATTGCCCGTTTTAGGGCTACGTTTGTCCAATTATCGCGTATGGATTTTATGAAGAGTTTATTCGATAAGATGTTTTCAGTAAGTCTGAAATTTTAGTTTGAAGCATAATTAAGCAGCACGGAAATGAAATGGTATCGTCTACGTGTGGTCTTGAGCGTTTTGTATGTTATTCATCATGAGCTTTTCGCTCTGTTTTGCTCATTAGGGCGGCGTGGATGAGGGTGAAGATCCAAGAAGTGCAGCCATCAGAGAACTTAGAGAAGAAACAGGAGTCAGATCCGCAGAGATTATTGCTGAAGTACTATTTCATTTATGAACTTGTTCTTACATATTTCATGAACCTAGTTCTTCTAATTGATAAAATGAAGGAATACTGGAGAAAGATCTTGACTGTTCAAATGAAATTAGATATCAACAGCATCCAATTTCTAAAATATTGCACTAAGTCACGTTTCTGTTTCCATAAACGGGTAAACTTGATGCTTTTCTCGTTATCAACTCTACCATCAAATTTATAATCAATAGAATTGGTTTATCATAATTGAATCACATTTTACATTTTTTTTTTTAGGACAAACTATTTGTGCTAAGACTTATCAACTAATGAGAGGGTCACTAGACAATCGTTTTGCTTTATAACATTCAATACCACTTGAAAGAATAACTCGTTGAATATTGAAATATCATTGTTTTCTCTTTTTTTTAGTACAACAAATGTAGAGGTATGAGTATCTAAACCTCCAACCTCAAGGGAAAGAGGGCATGCCAATTATTGTCGAGGCATGCTCATTTTGATTATTGAAATACCATTGATAGACAACCTGTGAGATCGCACATTGATTGGAAAGGAGAATGAAACATTCTTTATAAGGGTATGGAAACTTCTCGCAGACGGTTTAAACCCTTGAGGGGAAGCCCAGAAGGGAAACCCCAAAGAGGATAATATCTGCTAACAGTAGGCTTGGCCATTACAAATGGTATTAGAGGCAATGTGCCAGTGAGGATGCTGGACCCCAAAAGGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCGCAGACGCATTTCAAAACCTTGAGGGGAAGCTTGGGAAGGAAAGCCCGAAGAGGACAATATCTGTTAGCAGCAGGCTTGGGTCGTTGTGACTTGAATCTAGAGTTTAAAAGGATATAAGTTTAACGTGGCTCTATGATTACTTTGCGAACTCAGTGTAACCCATTGTGGTCATTTTGTTTAATCTCTGGAGATGGAGAAAGAATATTCTGAACTTCACTAGTGATCTCCTCAGCTCAATGACTTGGTTATTTAATACTTGTCCATCAATGTGGCTTGTTTGTTCAATGACCCTGTAGTATGGTTGTTGAACGATAGATCCTTCTGTATTAGTAGTTTTACGTGCATTCTGTGTGGATTACTGAAGTTGTAAATTCGCCTCATATTTTTCTTCTTTCACTTGGGAGTTTTTCCTGAATAAAAGCTTATGTTTACCTTAATTGAGTACAATAGTGAAATGTGTTGAACATTGGTTTCTTAAAGTAGGTACCTTATTGGCTGACTTATGACTTCCCACCACATGTCCGGGAAAAACTTCGACATCAGTGGGGTTCTGACTGGAAGGGTCAAGCGCAGAAGTGGTGAGTTCTACTTTCTATTCATATAGTTCTTGTTCCTTTCATATTCTTCAGAGCCAAATCCACACTCCACATACACTGTTTTATCTGGTTTATCTGGTTATCATTTACTCAATGCCGATCCTACTAAAAAAAAGAAACAATCTTGCCAAAACCCTGGTTTCCTTGTACTAATTGTTGAGCTATATTCATGTTGACGTACACCGTGTAGAATCAATGTCTTAACTATTGAGCTATGTTCATATTGGCGTACACCGTGTAGAATCAATGTTTTAACTGTTGAGCTATGTTCATGTTGGTGTACACAGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGTGTATACTGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATTAATGTCTTAACTGTGGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAATTGTTGAGCTATGTTCATGTTGGCGTACACTGTGTAGAATTAATGTCTTAACTGTGGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTNTCATGTTGACGTACACCGTGTAGAATCAATGTCTTAACTATTGAGCTATGTTCATATTGGCGTACACCGTGTAGAATCAATGTTTTAACTGTTGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGCGTACACCGTGTAGAATCAATGTCTTAACTGTTGAGTTATGTTCATGTTGGCCTACACCGTGTAGAATCAATGTCTTAACTGTTGAGCTATGTTCATGTTGGCGTACACCATGTAGAATCAATGTCTTAACTATTGAGCTATGTTCATATTGGCGTTAAAATACGTATGTTATAAAACAAAATCCACGGCAGTGAATGGATAATAGTATTACTACTACCTGGTGTCTCTGTTAGACACCCTTTCTCTATCATTTTCTTCTCATCCTACCAAGACCCTTTTCATTTGCCTCATCAAATTTCAATGATATTATGCATATCTGCAACTCTTATAGCACGTTCTTATGTTTGTAAAATTTTAGGTTTCTGCTGAAGTTGACTGGAAGTGACGAAGAGATCAATCTTTTAGGTGATGGGACTGAGAAACCCGAGTTTGGCGAATGGTCATGGATGTCACCTGAACAAGTAGTCGAACGTGTAAGTCGACACGCCATTAACATATCATTAACCAAAAGAAGCTGAGAAAAAAAATTAATCTGAATGACTAGTTGGATAATTCAACTTACATTCAAACTCTATCATGCAGGCTGTAGATTTCAAGAAACCCGTTTACAAAGACGTTCTAACGGTATTCAAACCCCATCTCGAGTAATTTTTTTCTCTACTACAAATATTTATACTTGTCCCTTTCAATAATGTTGGTTTAATTCTTTAGTTGAATGAACTTAAGTTAAATAAAAACATGTCACAAGCTTGATTGGGGAAGTAGTCTTCCTTCTTGAATGATGGTTGGTTATAGCGTTGTGTTCTTGGAATGAGATTATTGCAAATAAGTTCACATGTAGATTGCTCTCATATATTTGAGAATAATTCATGTTTTCTTCAATGGGAACAAGATTTTATACAGGTTTGAAGATGGATATTTCTCTACTGTTATTTAAATCACAATTACAG ATGAAGCGCGGAGCGTCGATTGAACGCCAATTGGGGGTGGGAAAAGGGATGGCCATAAGCCGATGTGTCGTCTTTAATCACTCACTTCTTCACTATCATCGTCGTCCTCCTTCACTTTTCTCATCTGCCCTGCGTTCGACCTCGTCATCCATGGAAGCTCCTCCCGAAGGTTACCGCAGAAACGTTGGCATTTGCCTCATCAATTCTTCTAAGAAGATTTTTGCTGCCTCAAGGTTGGATATACCAGATGCTTGGCAAATGCCACAGGGCGGCGTGGATGAGGGTGAAGATCCAAGAAGTGCAGCCATCAGAGAACTTAGAGAAGAAACAGGAGTCAGATCCGCAGAGATTATTGCTGAAGTACCTTATTGGCTGACTTATGACTTCCCACCACATGTCCGGGAAAAACTTCGACATCAGTGGGGTTCTGACTGGAAGGGTCAAGCGCAGAAGTGGTTTCTGCTGAAGTTGACTGGAAGTGACGAAGAGATCAATCTTTTAGGTGATGGGACTGAGAAACCCGAGTTTGGCGAATGGTCATGGATGTCACCTGAACAAGTAGTCGAACGTGCTGTAGATTTCAAGAAACCCGTTTACAAAGACGTTCTAACGGTATTCAAACCCCATCTCGAGTAATTTTTTTCTCTACTACAAATATTTATACTTGTCCCTTTCAATAATGTTGGTTTAATTCTTTAGTTGAATGAACTTAAGTTAAATAAAAACATGTCACAAGCTTGATTGGGGAAGTAGTCTTCCTTCTTGAATGATGGTTGGTTATAGCGTTGTGTTCTTGGAATGAGATTATTGCAAATAAGTTCACATGTAGATTGCTCTCATATATTTGAGAATAATTCATGTTTTCTTCAATGGGAACAAGATTTTATACAGGTTTGAAGATGGATATTTCTCTACTGTTATTTAAATCACAATTACAG ATGAAGCGCGGAGCGTCGATTGAACGCCAATTGGGGGTGGGAAAAGGGATGGCCATAAGCCGATGTGTCGTCTTTAATCACTCACTTCTTCACTATCATCGTCGTCCTCCTTCACTTTTCTCATCTGCCCTGCGTTCGACCTCGTCATCCATGGAAGCTCCTCCCGAAGGTTACCGCAGAAACGTTGGCATTTGCCTCATCAATTCTTCTAAGAAGATTTTTGCTGCCTCAAGGTTGGATATACCAGATGCTTGGCAAATGCCACAGGGCGGCGTGGATGAGGGTGAAGATCCAAGAAGTGCAGCCATCAGAGAACTTAGAGAAGAAACAGGAGTCAGATCCGCAGAGATTATTGCTGAAGTACCTTATTGGCTGACTTATGACTTCCCACCACATGTCCGGGAAAAACTTCGACATCAGTGGGGTTCTGACTGGAAGGGTCAAGCGCAGAAGTGGTTTCTGCTGAAGTTGACTGGAAGTGACGAAGAGATCAATCTTTTAGGTGATGGGACTGAGAAACCCGAGTTTGGCGAATGGTCATGGATGTCACCTGAACAAGTAGTCGAACGTGCTGTAGATTTCAAGAAACCCGTTTACAAAGACGTTCTAACGGTATTCAAACCCCATCTCGAGTAA
BLAST of CmoCh18G009570 vs. Swiss-Prot
Match: NUD26_ARATH (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26 PE=1 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.3e-80 Identity = 138/184 (75.00%), Postives = 156/184 (84.78%), Query Frame = 1
BLAST of CmoCh18G009570 vs. Swiss-Prot
Match: NUD27_ARATH (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27 PE=1 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 2.6e-64 Identity = 112/175 (64.00%), Postives = 137/175 (78.29%), Query Frame = 1
BLAST of CmoCh18G009570 vs. Swiss-Prot
Match: NUD25_ARATH (Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53 Identity = 93/158 (58.86%), Postives = 122/158 (77.22%), Query Frame = 1
BLAST of CmoCh18G009570 vs. Swiss-Prot
Match: RPPH_RHOSK (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=rppH PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.4e-38 Identity = 80/156 (51.28%), Postives = 101/156 (64.74%), Query Frame = 1
BLAST of CmoCh18G009570 vs. Swiss-Prot
Match: RPPH_RHOS4 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rppH PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.4e-38 Identity = 80/156 (51.28%), Postives = 101/156 (64.74%), Query Frame = 1
BLAST of CmoCh18G009570 vs. TrEMBL
Match: A0A0A0KRB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613530 PE=3 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 5.3e-101 Identity = 178/196 (90.82%), Postives = 185/196 (94.39%), Query Frame = 1
BLAST of CmoCh18G009570 vs. TrEMBL
Match: V4U9W2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016625mg PE=3 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.1e-81 Identity = 142/186 (76.34%), Postives = 161/186 (86.56%), Query Frame = 1
BLAST of CmoCh18G009570 vs. TrEMBL
Match: I3T6R0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 3.6e-81 Identity = 146/202 (72.28%), Postives = 170/202 (84.16%), Query Frame = 1
BLAST of CmoCh18G009570 vs. TrEMBL
Match: A0A0D2V0L7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G019900 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 4.7e-81 Identity = 141/170 (82.94%), Postives = 155/170 (91.18%), Query Frame = 1
BLAST of CmoCh18G009570 vs. TrEMBL
Match: O04841_LUPAN (Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase OS=Lupinus angustifolius PE=1 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.0e-80 Identity = 144/199 (72.36%), Postives = 165/199 (82.91%), Query Frame = 1
BLAST of CmoCh18G009570 vs. TAIR10
Match: AT3G10620.1 (AT3G10620.1 nudix hydrolase homolog 26) HSP 1 Score: 299.3 bits (765), Expect = 1.9e-81 Identity = 138/184 (75.00%), Postives = 156/184 (84.78%), Query Frame = 1
BLAST of CmoCh18G009570 vs. TAIR10
Match: AT5G06340.1 (AT5G06340.1 nudix hydrolase homolog 27) HSP 1 Score: 246.5 bits (628), Expect = 1.5e-65 Identity = 112/175 (64.00%), Postives = 137/175 (78.29%), Query Frame = 1
BLAST of CmoCh18G009570 vs. TAIR10
Match: AT1G30110.1 (AT1G30110.1 nudix hydrolase homolog 25) HSP 1 Score: 210.7 bits (535), Expect = 8.8e-55 Identity = 93/158 (58.86%), Postives = 122/158 (77.22%), Query Frame = 1
BLAST of CmoCh18G009570 vs. NCBI nr
Match: gi|449434516|ref|XP_004135042.1| (PREDICTED: nudix hydrolase 26, chloroplastic [Cucumis sativus]) HSP 1 Score: 375.2 bits (962), Expect = 7.7e-101 Identity = 178/196 (90.82%), Postives = 185/196 (94.39%), Query Frame = 1
BLAST of CmoCh18G009570 vs. NCBI nr
Match: gi|659091817|ref|XP_008446748.1| (PREDICTED: nudix hydrolase 26, chloroplastic [Cucumis melo]) HSP 1 Score: 370.9 bits (951), Expect = 1.4e-99 Identity = 177/195 (90.77%), Postives = 185/195 (94.87%), Query Frame = 1
BLAST of CmoCh18G009570 vs. NCBI nr
Match: gi|729351581|ref|XP_010543623.1| (PREDICTED: nudix hydrolase 26, chloroplastic [Tarenaya hassleriana]) HSP 1 Score: 314.7 bits (805), Expect = 1.2e-82 Identity = 145/183 (79.23%), Postives = 166/183 (90.71%), Query Frame = 1
BLAST of CmoCh18G009570 vs. NCBI nr
Match: gi|1009119731|ref|XP_015876538.1| (PREDICTED: nudix hydrolase 26, chloroplastic [Ziziphus jujuba]) HSP 1 Score: 313.5 bits (802), Expect = 2.7e-82 Identity = 146/174 (83.91%), Postives = 157/174 (90.23%), Query Frame = 1
BLAST of CmoCh18G009570 vs. NCBI nr
Match: gi|502118121|ref|XP_004496111.1| (PREDICTED: nudix hydrolase 26, chloroplastic [Cicer arietinum]) HSP 1 Score: 310.5 bits (794), Expect = 2.3e-81 Identity = 144/176 (81.82%), Postives = 158/176 (89.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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