Cp4.1LG09g02520 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g02520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAcyl-CoA N-acyltransferase
LocationCp4.1LG09 : 1445309 .. 1445596 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACTCCCTGGCATCATCTCCGCCTCTTTCTCCTGCTCCGTTCGTCTCTGTAACCCGAACAGCGCGCATCCTCGGAACGTCGCTGTCTCCGCCCAATCCTCGCCGGTCAATGCTAGCTACAGCGTCTCTGACAAGGACCTCGAATCCCGAGGCTTCGTCCTCAACCTCGACCTAACTAACTCGGTCTTCGCTGCCGTTGGATTCCACAAACGCGATCCGGATAAGATCAAGATTGCGTTGGAGCACACGGACGCGTTGCTCTGGATCCAATACAGTAAAATGTAG

mRNA sequence

ATGCTACTCCCTGGCATCATCTCCGCCTCTTTCTCCTGCTCCGTTCGTCTCTGTAACCCGAACAGCGCGCATCCTCGGAACGTCGCTGTCTCCGCCCAATCCTCGCCGGTCAATGCTAGCTACAGCGTCTCTGACAAGGACCTCGAATCCCGAGGCTTCGTCCTCAACCTCGACCTAACTAACTCGGTCTTCGCTGCCGTTGGATTCCACAAACGCGATCCGGATAAGATCAAGATTGCGTTGGAGCACACGGACGCGTTGCTCTGGATCCAATACAGTAAAATGTAG

Coding sequence (CDS)

ATGCTACTCCCTGGCATCATCTCCGCCTCTTTCTCCTGCTCCGTTCGTCTCTGTAACCCGAACAGCGCGCATCCTCGGAACGTCGCTGTCTCCGCCCAATCCTCGCCGGTCAATGCTAGCTACAGCGTCTCTGACAAGGACCTCGAATCCCGAGGCTTCGTCCTCAACCTCGACCTAACTAACTCGGTCTTCGCTGCCGTTGGATTCCACAAACGCGATCCGGATAAGATCAAGATTGCGTTGGAGCACACGGACGCGTTGCTCTGGATCCAATACAGTAAAATGTAG

Protein sequence

MLLPGIISASFSCSVRLCNPNSAHPRNVAVSAQSSPVNASYSVSDKDLESRGFVLNLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSKM
Homology
[Close]
BLAST of Cp4.1LG09g02520 vs. TrEMBL
Match: A0A0A0KR11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608010 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-27
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 1 

Query: 1   MLLPGIISASFS-CSVRLCNPNSAHPRNVAVS--AQSSPVNASYSVSDKDLESRGFVL-- 60
           MLLP I SA FS  S+RL NP S HPR VAVS  AQ+SP N+SYSVSD+DLESRGFVL  
Sbjct: 1   MLLPAITSAPFSFSSLRLTNPISPHPRYVAVSISAQASPANSSYSVSDRDLESRGFVLHR 60

Query: 61  -----NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
                NLD  NSVFAAVGF KRDPDKI++ALE+TDALLWIQY K
Sbjct: 61  TVSDLNLDHLNSVFAAVGFPKRDPDKIRVALENTDALLWIQYGK 104

[Close]
BLAST of Cp4.1LG09g02520 vs. TrEMBL
Match: M5XLX1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011870mg PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.3e-19
Identity = 56/101 (55.45%), Postives = 66/101 (65.35%), Query Frame = 1 

Query: 1   MLLPGIISASFSCSVRLCNPNSAHPRNVAVSAQSSPVNASYSVSDKDLESRGFVL----- 60
           MLL G ISA  SC        S  P NV VS ++S    +YS+SD+DL+SRGF+L     
Sbjct: 1   MLLRGTISAPLSCLRLRSTTTSTPPLNVPVSRRTSTTTNNYSISDQDLDSRGFLLHRTIA 60

Query: 61  --NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
             NLD  N VF AVGF KRDPDKI+ ALEHTDALLW++Y K
Sbjct: 61  ELNLDHLNKVFVAVGFPKRDPDKIRTALEHTDALLWMEYRK 101

[Close]
BLAST of Cp4.1LG09g02520 vs. TrEMBL
Match: W9RAS9_9ROSA (Putative N-acetyltransferase ycf52 OS=Morus notabilis GN=L484_026530 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.2e-17
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 1 

Query: 1   MLLPGIISASF--SCSVRLCN--PNSAHPRNVAVSAQSSPVNASYSVSDKDLESRGFVL- 60
           MLL G IS     S +VRL    P +A P+NVAVS+ S P + ++S+S+KDLESRGFVL 
Sbjct: 1   MLLRGAISRPLTSSAAVRLPTTAPAAALPQNVAVSS-SQPSSVTFSISEKDLESRGFVLR 60

Query: 61  ------NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
                 +LD  NSVF AVGF +RDP KI+IALE+TDA+LWI+++K
Sbjct: 61  RTAEDLDLDQLNSVFLAVGFPRRDPAKIRIALENTDAMLWIEHAK 104

[Close]
BLAST of Cp4.1LG09g02520 vs. TrEMBL
Match: G7ICB6_MEDTR (Acyl-CoA N-acyltransferase domain protein OS=Medicago truncatula GN=MTR_1g018030 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.9e-16
Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = 1 

Query: 1   MLLPGIISASFSCSVRLCNPNSAHPRNVAVSAQSSPVNASYSVSDKDLESRGFVL----- 60
           MLL G I A    S+RL   +  HPRN+ +S Q+S ++   S+SD+ LE RGF+L     
Sbjct: 1   MLLRGNIYAPVPSSLRLNFKSQTHPRNLTISCQAS-LDYPLSISDETLEKRGFILRRTAE 60

Query: 61  --NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
             NL+  N +F AVGF +RDP+KI++ALEHTD+L+WIQ  K
Sbjct: 61  GLNLEALNKIFVAVGFPRRDPEKIRVALEHTDSLVWIQERK 100

[Close]
BLAST of Cp4.1LG09g02520 vs. TrEMBL
Match: A0A103XKN0_CYNCS (Acyl-CoA N-acyltransferase OS=Cynara cardunculus var. scolymus GN=Ccrd_005492 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-15
Identity = 52/102 (50.98%), Postives = 63/102 (61.76%), Query Frame = 1 

Query: 1  MLLPGIISASFSCSVRLCNPN-SAHPRNVAVSAQSSPVNASYSVSDKDLESRGFVL---- 60
          MLL G  S  F   + L +P    HPR  + +A        Y++SD+DLESRGF L    
Sbjct: 1  MLLQGNFSLPFRSPLSLRSPTVHHHPRRFSFAAAQH----QYAISDEDLESRGFTLRRTI 60

Query: 61 ---NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
             NLD  NSVF AVGF KRD DKIK+ALEHTD+LLW++Y K
Sbjct: 61 EDLNLDHLNSVFVAVGFPKRDTDKIKVALEHTDSLLWVEYEK 98

[Close]
BLAST of Cp4.1LG09g02520 vs. TAIR10
Match: AT1G26220.1 (AT1G26220.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 1.6e-16
Identity = 51/109 (46.79%), Postives = 66/109 (60.55%), Query Frame = 1 

Query: 1   MLLPGIISASFSCSVRLCNPNSAHPRNVAVSAQSSPV--------NASYSVSDKDLESRG 60
           M L G IS     S+RL   ++ +P+N    + S             SYS+SD+DLESRG
Sbjct: 1   MFLGGTISTP-PASLRL--RSTLNPQNAVTQSSSQATFPAAMQRKPPSYSISDEDLESRG 60

Query: 61  FVL-------NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
           F+L       NLD  NSVFAAVGF +RD  KI++AL+HTDALLW++Y K
Sbjct: 61  FLLRRTTEGLNLDQLNSVFAAVGFPRRDTAKIEVALQHTDALLWVEYEK 106

[Close]
BLAST of Cp4.1LG09g02520 vs. NCBI nr
Match: gi|659091345|ref|XP_008446500.1| (PREDICTED: uncharacterized N-acetyltransferase ycf52 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-29
Identity = 75/103 (72.82%), Postives = 81/103 (78.64%), Query Frame = 1 

Query: 1   MLLPGIISASFSCSVRLCNPNSAHPRNVAVS--AQSSPVNASYSVSDKDLESRGFVL--- 60
           MLLP I SA FS S+RL NP S HPR VAVS  AQ+SP N+SYSVSDKDLESRGFVL   
Sbjct: 1   MLLPAITSAPFSSSLRLTNPISPHPRYVAVSISAQASPANSSYSVSDKDLESRGFVLHRT 60

Query: 61  ----NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
               NLD  NSVFAAVGF KRDPDKI++ALE+TDALLWIQY K
Sbjct: 61  VSDLNLDHLNSVFAAVGFPKRDPDKIRVALENTDALLWIQYGK 103

[Close]
BLAST of Cp4.1LG09g02520 vs. NCBI nr
Match: gi|449434698|ref|XP_004135133.1| (PREDICTED: uncharacterized N-acetyltransferase ycf52 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-27
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 1 

Query: 1   MLLPGIISASFS-CSVRLCNPNSAHPRNVAVS--AQSSPVNASYSVSDKDLESRGFVL-- 60
           MLLP I SA FS  S+RL NP S HPR VAVS  AQ+SP N+SYSVSD+DLESRGFVL  
Sbjct: 1   MLLPAITSAPFSFSSLRLTNPISPHPRYVAVSISAQASPANSSYSVSDRDLESRGFVLHR 60

Query: 61  -----NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
                NLD  NSVFAAVGF KRDPDKI++ALE+TDALLWIQY K
Sbjct: 61  TVSDLNLDHLNSVFAAVGFPKRDPDKIRVALENTDALLWIQYGK 104

[Close]
BLAST of Cp4.1LG09g02520 vs. NCBI nr
Match: gi|645277418|ref|XP_008243760.1| (PREDICTED: uncharacterized N-acetyltransferase ycf52 [Prunus mume])

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-19
Identity = 56/101 (55.45%), Postives = 67/101 (66.34%), Query Frame = 1 

Query: 1   MLLPGIISASFSCSVRLCNPNSAHPRNVAVSAQSSPVNASYSVSDKDLESRGFVL----- 60
           MLL G ISA  SC        S  P NV+VS ++S    +YS+SD+DL+SRGF+L     
Sbjct: 1   MLLRGTISAPLSCLRLRSTTTSTPPLNVSVSRRTSTTTNNYSISDQDLDSRGFLLHRTIA 60

Query: 61  --NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
             NLD  N VF AVGF KRDPDKI+ ALEHTDALLW++Y K
Sbjct: 61  ELNLDHLNKVFVAVGFPKRDPDKIRTALEHTDALLWMEYRK 101

[Close]
BLAST of Cp4.1LG09g02520 vs. NCBI nr
Match: gi|596288190|ref|XP_007225898.1| (hypothetical protein PRUPE_ppa011870mg [Prunus persica])

HSP 1 Score: 102.8 bits (255), Expect = 3.3e-19
Identity = 56/101 (55.45%), Postives = 66/101 (65.35%), Query Frame = 1 

Query: 1   MLLPGIISASFSCSVRLCNPNSAHPRNVAVSAQSSPVNASYSVSDKDLESRGFVL----- 60
           MLL G ISA  SC        S  P NV VS ++S    +YS+SD+DL+SRGF+L     
Sbjct: 1   MLLRGTISAPLSCLRLRSTTTSTPPLNVPVSRRTSTTTNNYSISDQDLDSRGFLLHRTIA 60

Query: 61  --NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
             NLD  N VF AVGF KRDPDKI+ ALEHTDALLW++Y K
Sbjct: 61  ELNLDHLNKVFVAVGFPKRDPDKIRTALEHTDALLWMEYRK 101

[Close]
BLAST of Cp4.1LG09g02520 vs. NCBI nr
Match: gi|470124661|ref|XP_004298329.1| (PREDICTED: uncharacterized N-acetyltransferase ycf52 [Fragaria vesca subsp. vesca])

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-18
Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 1 

Query: 1   MLLPGIISASFSCSVRLCNPNS---AHPRNVAVSAQSSPVNASYSVSDKDLESRGFVL-- 60
           MLL G ISA      RL    +   A P N+ VS  SSP ++ YS+SD+DL+SRGF+L  
Sbjct: 1   MLLRGTISAPLPSLRRLTTTTTTTAAPPPNLTVSRHSSPTSSKYSISDQDLDSRGFLLHR 60

Query: 61  -----NLDLTNSVFAAVGFHKRDPDKIKIALEHTDALLWIQYSK 95
                NLD  N VF AVGF KRDP KI+IAL+HTDALLW++Y+K
Sbjct: 61  TAADLNLDHLNKVFVAVGFPKRDPAKIRIALDHTDALLWLEYAK 104

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g02520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG09g02520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR11_CUCSA1.8e-2771.15Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608010 PE=4 SV=1[more]
M5XLX1_PRUPE2.3e-1955.45Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011870mg PE=4 SV=1[more]
W9RAS9_9ROSA8.2e-1755.24Putative N-acetyltransferase ycf52 OS=Morus notabilis GN=L484_026530 PE=4 SV=1[more]
G7ICB6_MEDTR6.9e-1648.51Acyl-CoA N-acyltransferase domain protein OS=Medicago truncatula GN=MTR_1g018030... [more]
A0A103XKN0_CYNCS1.5e-1550.98Acyl-CoA N-acyltransferase OS=Cynara cardunculus var. scolymus GN=Ccrd_005492 PE... [more]
BLAST of Cp4.1LG09g02520 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26220.11.6e-1646.79 Acyl-CoA N-acyltransferases (NAT) superfamily protein[more]
BLAST of Cp4.1LG09g02520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091345|ref|XP_008446500.1|4.6e-2972.82PREDICTED: uncharacterized N-acetyltransferase ycf52 [Cucumis melo][more]
gi|449434698|ref|XP_004135133.1|2.5e-2771.15PREDICTED: uncharacterized N-acetyltransferase ycf52 [Cucumis sativus][more]
gi|645277418|ref|XP_008243760.1|1.9e-1955.45PREDICTED: uncharacterized N-acetyltransferase ycf52 [Prunus mume][more]
gi|596288190|ref|XP_007225898.1|3.3e-1955.45hypothetical protein PRUPE_ppa011870mg [Prunus persica][more]
gi|470124661|ref|XP_004298329.1|2.1e-1853.85PREDICTED: uncharacterized N-acetyltransferase ycf52 [Fragaria vesca subsp. vesc... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0030187 melatonin biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0004059 aralkylamine N-acetyltransferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g02520.1Cp4.1LG09g02520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23091N-TERMINAL ACETYLTRANSFERASEcoord: 25..92
score: 9.3
NoneNo IPR availablePANTHERPTHR23091:SF206ACYL-COA N-ACYLTRANSFERASE DOMAIN-CONTAINING PROTEINcoord: 25..92
score: 9.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g02520Cucsa.284230Cucumber (Gy14) v1cgycpeB0745
Cp4.1LG09g02520CmaCh04G015630Cucurbita maxima (Rimu)cmacpeB700
Cp4.1LG09g02520CmoCh04G016350Cucurbita moschata (Rifu)cmocpeB651
Cp4.1LG09g02520Cla020335Watermelon (97103) v1cpewmB031
Cp4.1LG09g02520Csa5G608010Cucumber (Chinese Long) v2cpecuB041
Cp4.1LG09g02520MELO3C012182Melon (DHL92) v3.5.1cpemeB024
Cp4.1LG09g02520ClCG05G023360Watermelon (Charleston Gray)cpewcgB045
Cp4.1LG09g02520CSPI05G24630Wild cucumber (PI 183967)cpecpiB036
Cp4.1LG09g02520Lsi04G003230Bottle gourd (USVL1VR-Ls)cpelsiB032
Cp4.1LG09g02520MELO3C012182.2Melon (DHL92) v3.6.1cpemedB028
Cp4.1LG09g02520CsaV3_5G033650Cucumber (Chinese Long) v3cpecucB0043
Cp4.1LG09g02520Bhi07G001172Wax gourdcpewgoB0058
Cp4.1LG09g02520CsGy5G024130Cucumber (Gy14) v2cgybcpeB581
Cp4.1LG09g02520Carg21534Silver-seed gourdcarcpeB1448
Cp4.1LG09g02520Carg01784Silver-seed gourdcarcpeB1169
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g02520Cp4.1LG01g13220Cucurbita pepo (Zucchini)cpecpeB040
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g02520Cucurbita pepo (Zucchini)cpecpeB026
Cp4.1LG09g02520Cucurbita pepo (Zucchini)cpecpeB054
Cp4.1LG09g02520Cucumber (Gy14) v1cgycpeB0248
Cp4.1LG09g02520Cucurbita maxima (Rimu)cmacpeB072
Cp4.1LG09g02520Cucurbita maxima (Rimu)cmacpeB105
Cp4.1LG09g02520Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g02520Cucurbita moschata (Rifu)cmocpeB046
Cp4.1LG09g02520Cucurbita moschata (Rifu)cmocpeB081
Cp4.1LG09g02520Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g02520Wild cucumber (PI 183967)cpecpiB018
Cp4.1LG09g02520Bottle gourd (USVL1VR-Ls)cpelsiB024
Cp4.1LG09g02520Bottle gourd (USVL1VR-Ls)cpelsiB041
Cp4.1LG09g02520Watermelon (Charleston Gray)cpewcgB049
Cp4.1LG09g02520Watermelon (97103) v1cpewmB059
Cp4.1LG09g02520Melon (DHL92) v3.5.1cpemeB034
Cp4.1LG09g02520Cucumber (Gy14) v2cgybcpeB587
Cp4.1LG09g02520Melon (DHL92) v3.6.1cpemedB039
Cp4.1LG09g02520Silver-seed gourdcarcpeB0645
Cp4.1LG09g02520Silver-seed gourdcarcpeB0841
Cp4.1LG09g02520Cucumber (Chinese Long) v3cpecucB0020
Cp4.1LG09g02520Cucumber (Chinese Long) v3cpecucB0050