Cp4.1LG09g01330 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGTCGCCGAATATTCAACGTTAAAACCGCGTCATTTCAAGTTGCGTCGCTAGCTGACTTTGTTTTACCAGTTTTGACAATGAAACGCCCGCGTTCTGTTCTTATCCTCCTTCGTTTACTTAGAAGTTTCCTGATTCAAGAGCAAATAGGAATTTGGTTATAAATTCACTGCCTTCTTTGTTTGGACAGAATCCAAATTTGAAGACTTCCTCTGTTTCTTCTTCACCTCAAATCTCTGATCTTCAATGGATTTCTTCGGCAAAGCCAAGACCGTCCGTCTCCGTAGCCACCACGACAAGTACCTCGTCGCCAACGACGATGAGGAGTCTGTCAACCAAGACCGTGGCGGATCCTCCAATACAGCTCGCTGGTCAGTCGAGCTTACATCCGGCGCCTCCTCTGATTCTATAATCCGTCTCAAAAGCTGCTACGGCAAATACCTCACTGCTAGCAATCTCCCTTTCTTGCTCGGAATGACCGGCCGGAAAGTGCTTCAAACCCTTCCCCGACGACTCGATTCCTCCGTCGAATGGGAACCCATCAGAGAAGGGTCACAGGTCAAGTTGAAAACCCGATATGGGAACTTCTTAAGAGCCAATGGGGGTCTACCGCCATGGCGAAACTCGGTCACCCATGATATTCCGAGTCGATCCGCTACACAGGATTGGATCCTCTGGGACATCGATGTTGTTGAGATTCAAGTTCAGTCTTTTATTCGTAAAGCTCCCACGATTGAGCATATGGATTCTCTGGATTTCAATCCCGGCTCGCCCCCTTCTACATCAGGCAAACCGGCGCATTACTCTAGACTTGAGGTATGAGATCTCTACAAAAAACTTCCTTCAATGCATCATTTTTTCTTCCTGTTCTTCAAATTCTGTTCTTCAAATTCTGATCCCTATTTTTTGTGGGTTTTCTTGTAGTCTACTGATTCAACAATCAGTGTACCTCCCAAATCTGAAGGAAGGACTGTTTACTATCATGTGGCTGATGAAAGTGGAGAAGTGGATGAAGATACAGTGGAGGGTTCTTGTTTTACATTCAAAGGAAGTGGGGTGGAGGGCCTGACTCGTAAACTGGAGGAAGAAACAGGGATTGAAGATATCATCGTGTGCACTCGCAACCCATTGAATGGAAATCTTTATCCCCTTCGCCTGCAACTTCCTCCCAACAATGCTACCATGCATGTGGTGGCTGTTCCCGAGTCATCAAAATGTGAGATAGCTTCAAACCTTTTCCTGTTGAGTTTGTCTCTAAGTTGGCCCTACTGGTTTTGACCTTTTTCCTTAACATCTTGGCTATCTTTTGTTTTTCAGTGGGGCAGGAGTTTGCAAAGCAACGTTTATTATGAACTCAGACAAGTCTCAGACCTTGGTTCAGACTCACTCAGATTCTTCGTTGTTTTTTCTTTTGGCTACACAGGAATAGTTACAACAAAAGGGTGTTTAAAGCCATATGTGTAGTCTTCCATGGATTGCAGCTAAATTCAGGAAGCTTTTTGTGTAATTGATATTCAAAGCTGTTCTTGAACTGCCATAGGAAGGGAGATAGTTCTTGCAGTCTTGACTTTAAGGCAGAGTTTTTGGAAAGGTTCCAAGTGCTTTTAATTCATGTTGACTTGGCATATCATTGAATTATTTCATTTCTGAACAGTTCCAACCTGCACTTTTCAAACAATTGAATAACTTTATTGGCTGATCTACACAGAAATCACCAAATGTTCATACAGGAATACGTCCCATTCTTAAAATGATGAAATCTATTA AGAGTCGCCGAATATTCAACGTTAAAACCGCGTCATTTCAAGTTGCGTCGCTAGCTGACTTTGTTTTACCAGTTTTGACAATGAAACGCCCGCGTTCTGTTCTTATCCTCCTTCGTTTACTTAGAAGTTTCCTGATTCAAGAGCAAATAGGAATTTGGTTATAAATTCACTGCCTTCTTTGTTTGGACAGAATCCAAATTTGAAGACTTCCTCTGTTTCTTCTTCACCTCAAATCTCTGATCTTCAATGGATTTCTTCGGCAAAGCCAAGACCGTCCGTCTCCGTAGCCACCACGACAAGTACCTCGTCGCCAACGACGATGAGGAGTCTGTCAACCAAGACCGTGGCGGATCCTCCAATACAGCTCGCTGGTCAGTCGAGCTTACATCCGGCGCCTCCTCTGATTCTATAATCCGTCTCAAAAGCTGCTACGGCAAATACCTCACTGCTAGCAATCTCCCTTTCTTGCTCGGAATGACCGGCCGGAAAGTGCTTCAAACCCTTCCCCGACGACTCGATTCCTCCGTCGAATGGGAACCCATCAGAGAAGGGTCACAGGTCAAGTTGAAAACCCGATATGGGAACTTCTTAAGAGCCAATGGGGGTCTACCGCCATGGCGAAACTCGGTCACCCATGATATTCCGAGTCGATCCGCTACACAGGATTGGATCCTCTGGGACATCGATGTTGTTGAGATTCAAGTTCAGTCTTTTATTCGTAAAGCTCCCACGATTGAGCATATGGATTCTCTGGATTTCAATCCCGGCTCGCCCCCTTCTACATCAGGCAAACCGGCGCATTACTCTAGACTTGAGTCTACTGATTCAACAATCAGTGTACCTCCCAAATCTGAAGGAAGGACTGTTTACTATCATGTGGCTGATGAAAGTGGAGAAGTGGATGAAGATACAGTGGAGGGTTCTTGTTTTACATTCAAAGGAAGTGGGGTGGAGGGCCTGACTCGTAAACTGGAGGAAGAAACAGGGATTGAAGATATCATCGTGTGCACTCGCAACCCATTGAATGGAAATCTTTATCCCCTTCGCCTGCAACTTCCTCCCAACAATGCTACCATGCATGTGGTGGCTGTTCCCGAGTCATCAAAATGTGAGATAGCTTCAAACCTTTTCCTTGGGGCAGGAGTTTGCAAAGCAACGTTTATTATGAACTCAGACAAGTCTCAGACCTTGGTTCAGACTCACTCAGATTCTTCGTTGTTTTTTCTTTTGGCTACACAGGAATAGTTACAACAAAAGGGTGTTTAAAGCCATATGTGTAGTCTTCCATGGATTGCAGCTAAATTCAGGAAGCTTTTTGTGTAATTGATATTCAAAGCTGTTCTTGAACTGCCATAGGAAGGGAGATAGTTCTTGCAGTCTTGACTTTAAGGCAGAGTTTTTGGAAAGGTTCCAAGTGCTTTTAATTCATGTTGACTTGGCATATCATTGAATTATTTCATTTCTGAACAGTTCCAACCTGCACTTTTCAAACAATTGAATAACTTTATTGGCTGATCTACACAGAAATCACCAAATGTTCATACAGGAATACGTCCCATTCTTAAAATGATGAAATCTATTA ATGGATTTCTTCGGCAAAGCCAAGACCGTCCGTCTCCGTAGCCACCACGACAAGTACCTCGTCGCCAACGACGATGAGGAGTCTGTCAACCAAGACCGTGGCGGATCCTCCAATACAGCTCGCTGGTCAGTCGAGCTTACATCCGGCGCCTCCTCTGATTCTATAATCCGTCTCAAAAGCTGCTACGGCAAATACCTCACTGCTAGCAATCTCCCTTTCTTGCTCGGAATGACCGGCCGGAAAGTGCTTCAAACCCTTCCCCGACGACTCGATTCCTCCGTCGAATGGGAACCCATCAGAGAAGGGTCACAGGTCAAGTTGAAAACCCGATATGGGAACTTCTTAAGAGCCAATGGGGGTCTACCGCCATGGCGAAACTCGGTCACCCATGATATTCCGAGTCGATCCGCTACACAGGATTGGATCCTCTGGGACATCGATGTTGTTGAGATTCAAGTTCAGTCTTTTATTCGTAAAGCTCCCACGATTGAGCATATGGATTCTCTGGATTTCAATCCCGGCTCGCCCCCTTCTACATCAGGCAAACCGGCGCATTACTCTAGACTTGAGTCTACTGATTCAACAATCAGTGTACCTCCCAAATCTGAAGGAAGGACTGTTTACTATCATGTGGCTGATGAAAGTGGAGAAGTGGATGAAGATACAGTGGAGGGTTCTTGTTTTACATTCAAAGGAAGTGGGGTGGAGGGCCTGACTCGTAAACTGGAGGAAGAAACAGGGATTGAAGATATCATCGTGTGCACTCGCAACCCATTGAATGGAAATCTTTATCCCCTTCGCCTGCAACTTCCTCCCAACAATGCTACCATGCATGTGGTGGCTGTTCCCGAGTCATCAAAATGTGAGATAGCTTCAAACCTTTTCCTTGGGGCAGGAGTTTGCAAAGCAACGTTTATTATGAACTCAGACAAGTCTCAGACCTTGGTTCAGACTCACTCAGATTCTTCGTTGTTTTTTCTTTTGGCTACACAGGAATAG MDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGASSDSIIRLKSCYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGGLPPWRNSVTHDIPSRSATQDWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTSGKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGEVDEDTVEGSCFTFKGSGVEGLTRKLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKCEIASNLFLGAGVCKATFIMNSDKSQTLVQTHSDSSLFFLLATQE
BLAST of Cp4.1LG09g01330 vs. TrEMBL
Match: A0A0A0KQG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604130 PE=4 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 2.3e-143 Identity = 250/287 (87.11%), Postives = 267/287 (93.03%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. TrEMBL
Match: A0A0A0KVS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604110 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 2.6e-126 Identity = 224/286 (78.32%), Postives = 249/286 (87.06%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. TrEMBL
Match: A0A0D2VYJ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G121500 PE=4 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-116 Identity = 208/289 (71.97%), Postives = 243/289 (84.08%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. TrEMBL
Match: A0A0B0NDU4_GOSAR (E3 ubiquitin-protein ligase ORTHRUS 2-like protein OS=Gossypium arboreum GN=F383_13276 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 4.2e-116 Identity = 207/289 (71.63%), Postives = 243/289 (84.08%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. TrEMBL
Match: U5FXK6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s04440g PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 9.3e-116 Identity = 212/291 (72.85%), Postives = 238/291 (81.79%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. TAIR10
Match: AT1G59710.1 (AT1G59710.1 Protein of unknown function (DUF569)) HSP 1 Score: 378.3 bits (970), Expect = 5.0e-105 Identity = 191/299 (63.88%), Postives = 227/299 (75.92%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. TAIR10
Match: AT3G28630.1 (AT3G28630.1 Protein of unknown function (DUF569)) HSP 1 Score: 345.1 bits (884), Expect = 4.7e-95 Identity = 176/310 (56.77%), Postives = 214/310 (69.03%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. TAIR10
Match: AT1G27100.1 (AT1G27100.1 Actin cross-linking protein) HSP 1 Score: 330.5 bits (846), Expect = 1.2e-90 Identity = 168/293 (57.34%), Postives = 210/293 (71.67%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. TAIR10
Match: AT1G69890.1 (AT1G69890.1 Protein of unknown function (DUF569)) HSP 1 Score: 321.2 bits (822), Expect = 7.3e-88 Identity = 165/287 (57.49%), Postives = 203/287 (70.73%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. TAIR10
Match: AT3G01311.1 (AT3G01311.1 Protein of unknown function (DUF569)) HSP 1 Score: 296.6 bits (758), Expect = 1.9e-80 Identity = 151/294 (51.36%), Postives = 204/294 (69.39%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. NCBI nr
Match: gi|449434845|ref|XP_004135206.1| (PREDICTED: uncharacterized protein LOC105434385 [Cucumis sativus]) HSP 1 Score: 516.5 bits (1329), Expect = 3.4e-143 Identity = 250/287 (87.11%), Postives = 267/287 (93.03%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. NCBI nr
Match: gi|659090959|ref|XP_008446294.1| (PREDICTED: uncharacterized protein LOC103489071 [Cucumis melo]) HSP 1 Score: 516.2 bits (1328), Expect = 4.4e-143 Identity = 250/287 (87.11%), Postives = 267/287 (93.03%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. NCBI nr
Match: gi|778705240|ref|XP_011655659.1| (PREDICTED: uncharacterized protein LOC101205876 isoform X1 [Cucumis sativus]) HSP 1 Score: 468.0 bits (1203), Expect = 1.4e-128 Identity = 228/295 (77.29%), Postives = 255/295 (86.44%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. NCBI nr
Match: gi|659090957|ref|XP_008446292.1| (PREDICTED: uncharacterized protein LOC103489070 [Cucumis melo]) HSP 1 Score: 461.5 bits (1186), Expect = 1.3e-126 Identity = 224/286 (78.32%), Postives = 247/286 (86.36%), Query Frame = 1
BLAST of Cp4.1LG09g01330 vs. NCBI nr
Match: gi|778705250|ref|XP_011655660.1| (PREDICTED: uncharacterized protein LOC101205876 isoform X2 [Cucumis sativus]) HSP 1 Score: 459.9 bits (1182), Expect = 3.7e-126 Identity = 224/286 (78.32%), Postives = 249/286 (87.06%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |