CmaCh18G011910 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACGCCCGCGTTCTGTTCTTATCCTCCTGCGTTTACTTAGAAGTTTCCTGATTCAAGATCGAATAAGAATTTAGTCATAGCATTGGGATATTCATCATCAAGTTATAAATTCACTGCCTTCTTTGTTTGAACAGAATCCAAATTGGAAGTACCCAAAATTTGAAGACTTCCTCTGTTTCTTCTTCAGCTCAAATCTCCGATCTTCAATGGATTTCTTCGGCAAAGCCAAGACCGTCCGTCTCCGTAGCCACCACGACAAGTACCTTGTCGCCAACGACGATGAGGAGTCTGTCAACCAAGACCGTGGCGGATCCTCCAATACAGCTCGCTGGTCAGTCGAGCTTACATCCGGCGCAACCTCTGATTCTATCATCCGTCTCAAAAGCTGCTACGGCAAATACCTCACTGCTAGCAATCTCCCTTTCTTGCTCGGAATGACCGGTCGGAAAGTGCTTCAAACCCTTCCCCGACGACTCGATTCCTCCGTCGAATGGGAACCCATTAGAGAAGGGTCACAGGTCAAGTTGAAAACCCGATATGGGAACTTTCTGAGAGCCAATGGGGGTCTACCGCCGTGGCGAAACTCGGTCACCCATGATATTCCGAGTCGAACCACTACACAGTATTGGATCCTCTGGGACATCGATGTTGTTGAGATTCAAGTCCAGTCTTTTATTCGTAAAGCTCCCACAATTGAGCATATGGATTCTCTGGATTTCAATCCCGGCTCGCCCCCTTCTACATCTGGCAAACCGGCGCATTACTCTAGACTTGAGGTTTGAAATCTCTACAAAAAACTTCCTTCAAGGCACCATTTTTTCTTCCTGTTCTTCAAATTCTGATACCCATTTTTTGTGGGTTTTCTTGTAGTCTACTGATTCAACAATCAGTGTACCGCCCAAATCTGAAGGAAGGACTGTTTACTACCATGTGGCTGATGAAAGTGGAGATGTGGATGAAGATACAGTGGAGGGTTCTTGTCTTACATTCAAAGGAAATGGGGTGGAGGGACTGACTCGTAAACTGGAGGAAGAAACAGGGATTGAAGATATCATCGTGTGCACTCGCAACCCATTGAATGGAAATCTTTATCCCCTTCGCCTGCAACTTCCTCCCAACAATGCTACCATGCATGTGGTGGCTGTTCCCGAGTCATCAAAATGTGAGATAGCTTCAAACCTTTTCCTGTTGAGTTTTTCTCTAAGTTGGCCCTACTGGTTTTGATCTTTTTCCTTAACATCTTGGCTATCTTTTGTTTTTCAGTGGGGCAGGAGTTTGCAAAGCAACGTTTATTATGAACTCAGACAAGTATCAGACCTTGGTTCAGACTCGCTCAGATTCTTCGTTGTTTTTTCTTTTGGCCACACAGAAACAGTTACAACAAAAGGGTGTTTAAAGCCATATGTGTAGTCTTCCATATCAGTGATTGCAGCTAAATTCAGGAAGCTTTTTCTGTAATTGATATTCAAAGCTGTTCTTGAATTGCCATAGGAAGGGAGATAGTTCTTGCAGTCTTGACTTTAAGGCAGAGTTTTTGGAAAGGTTCTAACTCCTGTTCATTCATGTTGACTTGGCATATCATTGAATGATTTCATTTCTGAACAGTTCCAACCTGCACTTTTCAAACAATTGAATAACTTTATTGGCTGATCTACACAGAAAACACCAAAAGTTCATACAGGAATACGTCCCATTCTTAAAATGATGAAATCTATTAAGATATCTCATGATAATATCTGTAATGAAAATTGGAGAAATTTCTCATGACAACTCTTCTTTAGAAAGCCTTTCAAGGAGGAGTCCGTGGACTGTCTAAGAAAAATAAGCTGCATCAATTCTACTTGGGAGTTTTAGAGATAAAACATCTGCTTGTAATCTCAGGTAGGTTTGTACTTAAAAATTAAAAATATTGAGATGTGAGATCTTACATTGGTTGTAGAGAGGAATAAAGCATTTCTTACCACGGTGTGGAAACCTATCCTTAATATACGTGTGTTTAAAATCGTGAGGATGACGGCGACATATAACGGACCAAAGCAGACAATATATGCTAACAATAAACTTGGTATCAGAGCGAAACATCGTATATCAATGAGGACATTGGAC ATGAAACGCCCGCGTTCTAATCCAAATTGGAAGTACCCAAAATTTGAAGACTTCCTCTGTTTCTTCTTCAGCTCAAATCTCCGATCTTCAATGGATTTCTTCGGCAAAGCCAAGACCGTCCGTCTCCGTAGCCACCACGACAAGTACCTTGTCGCCAACGACGATGAGGAGTCTGTCAACCAAGACCGTGGCGGATCCTCCAATACAGCTCGCTGGTCAGTCGAGCTTACATCCGGCGCAACCTCTGATTCTATCATCCGTCTCAAAAGCTGCTACGGCAAATACCTCACTGCTAGCAATCTCCCTTTCTTGCTCGGAATGACCGGTCGGAAAGTGCTTCAAACCCTTCCCCGACGACTCGATTCCTCCGTCGAATGGGAACCCATTAGAGAAGGGTCACAGGTCAAGTTGAAAACCCGATATGGGAACTTTCTGAGAGCCAATGGGGGTCTACCGCCGTGGCGAAACTCGGTCACCCATGATATTCCGAGTCGAACCACTACACAGTATTGGATCCTCTGGGACATCGATGTTGTTGAGATTCAAGTCCAGTCTTTTATTCGTAAAGCTCCCACAATTGAGCATATGGATTCTCTGGATTTCAATCCCGGCTCGCCCCCTTCTACATCTGGCAAACCGGCGCATTACTCTAGACTTGAGTCTACTGATTCAACAATCAGTGTACCGCCCAAATCTGAAGGAAGGACTGTTTACTACCATGTGGCTGATGAAAGTGGAGATGTGGATGAAGATACAGTGGAGGGTTCTTGTCTTACATTCAAAGGAAATGGGGTGGAGGGACTGACTCGTAAACTGGAGGAAGAAACAGGGATTGAAGATATCATCGTGTGCACTCGCAACCCATTGAATGGAAATCTTTATCCCCTTCGCCTGCAACTTCCTCCCAACAATGCTACCATGCATGTGGTGGCTGTTCCCGAGTCATCAAAATTGGGGCAGGAGTTTGCAAAGCAACGTTTATTATGAACTCAGACAAGTATCAGACCTTGGTTCAGACTCGCTCAGATTCTTCGTTGTTTTTTCTTTTGGCCACACAGAAACAGTTACAACAAAAGGGTGTTTAAAGCCATATGTGTAGTCTTCCATATCAGTGATTGCAGCTAAATTCAGGAAGCTTTTTCTGTAATTGATATTCAAAGCTGTTCTTGAATTGCCATAGGAAGGGAGATAGTTCTTGCAGTCTTGACTTTAAGGCAGAGTTTTTGGAAAGGTTCTAACTCCTGTTCATTCATGTTGACTTGGCATATCATTGAATGATTTCATTTCTGAACAGTTCCAACCTGCACTTTTCAAACAATTGAATAACTTTATTGGCTGATCTACACAGAAAACACCAAAAGTTCATACAGGAATACGTCCCATTCTTAAAATGATGAAATCTATTAAGATATCTCATGATAATATCTGTAATGAAAATTGGAGAAATTTCTCATGACAACTCTTCTTTAGAAAGCCTTTCAAGGAGGAGTCCGTGGACTGTCTAAGAAAAATAAGCTGCATCAATTCTACTTGGGAGTTTTAGAGATAAAACATCTGCTTGTAATCTCAGGTAGGTTTGTACTTAAAAATTAAAAATATTGAGATGTGAGATCTTACATTGGTTGTAGAGAGGAATAAAGCATTTCTTACCACGGTGTGGAAACCTATCCTTAATATACGTGTGTTTAAAATCGTGAGGATGACGGCGACATATAACGGACCAAAGCAGACAATATATGCTAACAATAAACTTGGTATCAGAGCGAAACATCGTATATCAATGAGGACATTGGAC ATGAAACGCCCGCGTTCTAATCCAAATTGGAAGTACCCAAAATTTGAAGACTTCCTCTGTTTCTTCTTCAGCTCAAATCTCCGATCTTCAATGGATTTCTTCGGCAAAGCCAAGACCGTCCGTCTCCGTAGCCACCACGACAAGTACCTTGTCGCCAACGACGATGAGGAGTCTGTCAACCAAGACCGTGGCGGATCCTCCAATACAGCTCGCTGGTCAGTCGAGCTTACATCCGGCGCAACCTCTGATTCTATCATCCGTCTCAAAAGCTGCTACGGCAAATACCTCACTGCTAGCAATCTCCCTTTCTTGCTCGGAATGACCGGTCGGAAAGTGCTTCAAACCCTTCCCCGACGACTCGATTCCTCCGTCGAATGGGAACCCATTAGAGAAGGGTCACAGGTCAAGTTGAAAACCCGATATGGGAACTTTCTGAGAGCCAATGGGGGTCTACCGCCGTGGCGAAACTCGGTCACCCATGATATTCCGAGTCGAACCACTACACAGTATTGGATCCTCTGGGACATCGATGTTGTTGAGATTCAAGTCCAGTCTTTTATTCGTAAAGCTCCCACAATTGAGCATATGGATTCTCTGGATTTCAATCCCGGCTCGCCCCCTTCTACATCTGGCAAACCGGCGCATTACTCTAGACTTGAGTCTACTGATTCAACAATCAGTGTACCGCCCAAATCTGAAGGAAGGACTGTTTACTACCATGTGGCTGATGAAAGTGGAGATGTGGATGAAGATACAGTGGAGGGTTCTTGTCTTACATTCAAAGGAAATGGGGTGGAGGGACTGACTCGTAAACTGGAGGAAGAAACAGGGATTGAAGATATCATCGTGTGCACTCGCAACCCATTGAATGGAAATCTTTATCCCCTTCGCCTGCAACTTCCTCCCAACAATGCTACCATGCATGTGGTGGCTGTTCCCGAGTCATCAAAATTGGGGCAGGAGTTTGCAAAGCAACGTTTATTATGA MKRPRSNPNWKYPKFEDFLCFFFSSNLRSSMDFFGKAKTVRLRSHHDKYLVANDDEESVNQDRGGSSNTARWSVELTSGATSDSIIRLKSCYGKYLTASNLPFLLGMTGRKVLQTLPRRLDSSVEWEPIREGSQVKLKTRYGNFLRANGGLPPWRNSVTHDIPSRTTTQYWILWDIDVVEIQVQSFIRKAPTIEHMDSLDFNPGSPPSTSGKPAHYSRLESTDSTISVPPKSEGRTVYYHVADESGDVDEDTVEGSCLTFKGNGVEGLTRKLEEETGIEDIIVCTRNPLNGNLYPLRLQLPPNNATMHVVAVPESSKLGQEFAKQRLL
BLAST of CmaCh18G011910 vs. TrEMBL
Match: A0A0A0KQG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604130 PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 1.3e-146 Identity = 257/298 (86.24%), Postives = 272/298 (91.28%), Query Frame = 1
BLAST of CmaCh18G011910 vs. TrEMBL
Match: A0A0A0KVS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604110 PE=4 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 1.6e-131 Identity = 235/306 (76.80%), Postives = 261/306 (85.29%), Query Frame = 1
BLAST of CmaCh18G011910 vs. TrEMBL
Match: A0A067JBV0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21718 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.5e-118 Identity = 218/305 (71.48%), Postives = 247/305 (80.98%), Query Frame = 1
BLAST of CmaCh18G011910 vs. TrEMBL
Match: U5FXK6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s04440g PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 7.5e-118 Identity = 216/299 (72.24%), Postives = 243/299 (81.27%), Query Frame = 1
BLAST of CmaCh18G011910 vs. TrEMBL
Match: A0A061E7B5_THECC (Actin cross-linking protein, putative OS=Theobroma cacao GN=TCM_010028 PE=4 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 9.8e-118 Identity = 211/307 (68.73%), Postives = 248/307 (80.78%), Query Frame = 1
BLAST of CmaCh18G011910 vs. TAIR10
Match: AT1G59710.1 (AT1G59710.1 Protein of unknown function (DUF569)) HSP 1 Score: 381.7 bits (979), Expect = 4.5e-106 Identity = 192/306 (62.75%), Postives = 230/306 (75.16%), Query Frame = 1
BLAST of CmaCh18G011910 vs. TAIR10
Match: AT3G28630.1 (AT3G28630.1 Protein of unknown function (DUF569)) HSP 1 Score: 339.3 bits (869), Expect = 2.6e-93 Identity = 173/308 (56.17%), Postives = 213/308 (69.16%), Query Frame = 1
BLAST of CmaCh18G011910 vs. TAIR10
Match: AT1G27100.1 (AT1G27100.1 Actin cross-linking protein) HSP 1 Score: 326.6 bits (836), Expect = 1.7e-89 Identity = 167/297 (56.23%), Postives = 210/297 (70.71%), Query Frame = 1
BLAST of CmaCh18G011910 vs. TAIR10
Match: AT1G69890.1 (AT1G69890.1 Protein of unknown function (DUF569)) HSP 1 Score: 321.2 bits (822), Expect = 7.2e-88 Identity = 166/287 (57.84%), Postives = 206/287 (71.78%), Query Frame = 1
BLAST of CmaCh18G011910 vs. TAIR10
Match: AT3G01311.1 (AT3G01311.1 Protein of unknown function (DUF569)) HSP 1 Score: 293.9 bits (751), Expect = 1.2e-79 Identity = 150/287 (52.26%), Postives = 202/287 (70.38%), Query Frame = 1
BLAST of CmaCh18G011910 vs. NCBI nr
Match: gi|449434845|ref|XP_004135206.1| (PREDICTED: uncharacterized protein LOC105434385 [Cucumis sativus]) HSP 1 Score: 527.3 bits (1357), Expect = 1.9e-146 Identity = 257/298 (86.24%), Postives = 272/298 (91.28%), Query Frame = 1
BLAST of CmaCh18G011910 vs. NCBI nr
Match: gi|659090959|ref|XP_008446294.1| (PREDICTED: uncharacterized protein LOC103489071 [Cucumis melo]) HSP 1 Score: 524.2 bits (1349), Expect = 1.6e-145 Identity = 256/298 (85.91%), Postives = 271/298 (90.94%), Query Frame = 1
BLAST of CmaCh18G011910 vs. NCBI nr
Match: gi|659090957|ref|XP_008446292.1| (PREDICTED: uncharacterized protein LOC103489070 [Cucumis melo]) HSP 1 Score: 478.0 bits (1229), Expect = 1.3e-131 Identity = 235/306 (76.80%), Postives = 259/306 (84.64%), Query Frame = 1
BLAST of CmaCh18G011910 vs. NCBI nr
Match: gi|778705250|ref|XP_011655660.1| (PREDICTED: uncharacterized protein LOC101205876 isoform X2 [Cucumis sativus]) HSP 1 Score: 477.2 bits (1227), Expect = 2.2e-131 Identity = 235/306 (76.80%), Postives = 261/306 (85.29%), Query Frame = 1
BLAST of CmaCh18G011910 vs. NCBI nr
Match: gi|778705240|ref|XP_011655659.1| (PREDICTED: uncharacterized protein LOC101205876 isoform X1 [Cucumis sativus]) HSP 1 Score: 466.1 bits (1198), Expect = 5.1e-128 Identity = 229/296 (77.36%), Postives = 253/296 (85.47%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |