Cp4.1LG08g13880 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g13880
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein TRANSPARENT TESTA 1
LocationCp4.1LG08 : 9954659 .. 9956500 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAACACAATCTCTCTCCCACTCTCCACCGTTCACTTCCTTCAGTCATCTTCTTCTTCTCTCTCTCTCTATAAAAGCATTCCACCATTAAAGCCACCACCACACCTAAACACATTAAAAAGAAGAACAAATAAGAAAAGAAACTATTCCCTCTCCTTCCCACAGATCCCTTTTCCCATTAATCCCACTTCCACCATGGATGATCCTTCCACTAATTTCTTCACAGATCTCTTCAAATTCAACTATCCCACTAATTTCCACCACCACCACAACCCTCCTTCTTCAAATCCTCCTCCCAATTTCTTCCACGCGCCGCCGTCTTCTCCTCCACTCCGGCAGGCCCTCCCCCTTCTCCGCCTCAGCCCCACAAGGTCATCTCAAGACCACCACCTCTCTTTTACTTCCTCCTCCGCCATGGAAATTGACAACAACAACAACCACAACAACGATAACGAGGATGTTTCGGTGACGGTTGCACTTCACATAGGGCTTCCAAGCTCTAATGCCTCAGAAATGGCGACCCTTTTGGTGTCTGATAATAATAATCAAAATGAGGAAGAAGATCAATTGGAAGAAGAATTAGAAGAAGAAGAAGATGAAGATGAAGAACAGCAACAAGCGGGTATCACAATTTCTGGATTCTCTTTGAGTAGCAGACTCAATAAAGGACAGTATTGGATCCCTACTCCTTCTCAAATCCTCATTGGTCCTACTCAATTTTCTTGTCCTGTTTGTTTCAAAACCTTCAATCGATACAACAACATGCAGGTAAACCTCTCAAAATTCCATCTTTTATGCTTTGTTCTTACAAATTTCAAATTTTTCTTAATGGGTTCTTCTTTTTTTGCATGGATTTGTTGTTGATTATGATGGGGTTTGATTCAATTAATGTTTAATTTTTGTTTAGTGATTGAACAACACACGCAATGTTCTTTGTGCCCCCTCCCTCTCTCCCCTTTTAGTATCTTGAACTCTGTGCTTCCCTTGTTTTAGAGGTTCTTTTTTGGGTCTTGCAAATTTTCTTTTGTTTCTCTCAAATGGGTCTTCCAAAGTTTTGATTTTTATGACACTAGAGCCTTCAAAATCTCAACTTTGTTATGCTAATGCATTGTTTGATATGAACAAAATTGAAAAAAAAAATGGGTATTATAGATGCACATGTGGGGGCATGGTTCACAATACAGGCGAGGCCCGGAGTCCTTGAGAGGCACACAGCCAACGGGGATGCTCAGGCTGCCGTGCTACTGCTGCTCGCCGGGCTGCCGCAACAACATCGACCATCCGAGAGCGAAGCCATTGAAGGACTTCCGAACGCTTCAAACGCATTACAAACGCAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGTAAAGCCTTTGCTGTTAGAGGGGATTGGAGAACTCATGAGAAGAATTGTGGGAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCATAAGAGATCGCTTAAAGATCATATCAAAGCCTTTGGAAATGGGCATGCTGCTTATAATAGTAATATTAATAACAACTGTGATCATCGTCAACAACAACATCATCATCATCATCATCATCATCATCATCATCATCATGCGTTCGATGAGGAGGACGAGTCGGCTTATTCTGAAGTCGAGGAAGATCATGATTGATTTTGTTGTGTTCTAATGGAGATTTGAGTATGTTTTTTTTTATCTATATGGGGTTTAAGGGAACCTTATTCTTACATATTTTTAGTATATACATGTTACAAAATCCAGATGGCTCTTTTTCCAAATTGAATTTACCCTTTTTAATCAACTTCCCTTGGTTTCGTCCGATTGTCATGCTCGAGTTGAC

mRNA sequence

ATAACACAATCTCTCTCCCACTCTCCACCGTTCACTTCCTTCAGTCATCTTCTTCTTCTCTCTCTCTCTATAAAAGCATTCCACCATTAAAGCCACCACCACACCTAAACACATTAAAAAGAAGAACAAATAAGAAAAGAAACTATTCCCTCTCCTTCCCACAGATCCCTTTTCCCATTAATCCCACTTCCACCATGGATGATCCTTCCACTAATTTCTTCACAGATCTCTTCAAATTCAACTATCCCACTAATTTCCACCACCACCACAACCCTCCTTCTTCAAATCCTCCTCCCAATTTCTTCCACGCGCCGCCGTCTTCTCCTCCACTCCGGCAGGCCCTCCCCCTTCTCCGCCTCAGCCCCACAAGGTCATCTCAAGACCACCACCTCTCTTTTACTTCCTCCTCCGCCATGGAAATTGACAACAACAACAACCACAACAACGATAACGAGGATGTTTCGGTGACGGTTGCACTTCACATAGGGCTTCCAAGCTCTAATGCCTCAGAAATGGCGACCCTTTTGGTGTCTGATAATAATAATCAAAATGAGGAAGAAGATCAATTGGAAGAAGAATTAGAAGAAGAAGAAGATGAAGATGAAGAACAGCAACAAGCGGGTATCACAATTTCTGGATTCTCTTTGAGTAGCAGACTCAATAAAGGACAGTATTGGATCCCTACTCCTTCTCAAATCCTCATTGGTCCTACTCAATTTTCTTGTCCTGTTTGTTTCAAAACCTTCAATCGATACAACAACATGCAGATGCACATGTGGGGGCATGGTTCACAATACAGGCGAGGCCCGGAGTCCTTGAGAGGCACACAGCCAACGGGGATGCTCAGGCTGCCGTGCTACTGCTGCTCGCCGGGCTGCCGCAACAACATCGACCATCCGAGAGCGAAGCCATTGAAGGACTTCCGAACGCTTCAAACGCATTACAAACGCAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGTAAAGCCTTTGCTGTTAGAGGGGATTGGAGAACTCATGAGAAGAATTGTGGGAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCATAAGAGATCGCTTAAAGATCATATCAAAGCCTTTGGAAATGGGCATGCTGCTTATAATAGTAATATTAATAACAACTGTGATCATCGTCAACAACAACATCATCATCATCATCATCATCATCATCATCATCATCATGCGTTCGATGAGGAGGACGAGTCGGCTTATTCTGAAGTCGAGGAAGATCATGATTGATTTTGTTGTGTTCTAATGGAGATTTGAGTATGTTTTTTTTTATCTATATGGGGTTTAAGGGAACCTTATTCTTACATATTTTTAGTATATACATGTTACAAAATCCAGATGGCTCTTTTTCCAAATTGAATTTACCCTTTTTAATCAACTTCCCTTGGTTTCGTCCGATTGTCATGCTCGAGTTGAC

Coding sequence (CDS)

ATGGATGATCCTTCCACTAATTTCTTCACAGATCTCTTCAAATTCAACTATCCCACTAATTTCCACCACCACCACAACCCTCCTTCTTCAAATCCTCCTCCCAATTTCTTCCACGCGCCGCCGTCTTCTCCTCCACTCCGGCAGGCCCTCCCCCTTCTCCGCCTCAGCCCCACAAGGTCATCTCAAGACCACCACCTCTCTTTTACTTCCTCCTCCGCCATGGAAATTGACAACAACAACAACCACAACAACGATAACGAGGATGTTTCGGTGACGGTTGCACTTCACATAGGGCTTCCAAGCTCTAATGCCTCAGAAATGGCGACCCTTTTGGTGTCTGATAATAATAATCAAAATGAGGAAGAAGATCAATTGGAAGAAGAATTAGAAGAAGAAGAAGATGAAGATGAAGAACAGCAACAAGCGGGTATCACAATTTCTGGATTCTCTTTGAGTAGCAGACTCAATAAAGGACAGTATTGGATCCCTACTCCTTCTCAAATCCTCATTGGTCCTACTCAATTTTCTTGTCCTGTTTGTTTCAAAACCTTCAATCGATACAACAACATGCAGATGCACATGTGGGGGCATGGTTCACAATACAGGCGAGGCCCGGAGTCCTTGAGAGGCACACAGCCAACGGGGATGCTCAGGCTGCCGTGCTACTGCTGCTCGCCGGGCTGCCGCAACAACATCGACCATCCGAGAGCGAAGCCATTGAAGGACTTCCGAACGCTTCAAACGCATTACAAACGCAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGTAAAGCCTTTGCTGTTAGAGGGGATTGGAGAACTCATGAGAAGAATTGTGGGAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCATAAGAGATCGCTTAAAGATCATATCAAAGCCTTTGGAAATGGGCATGCTGCTTATAATAGTAATATTAATAACAACTGTGATCATCGTCAACAACAACATCATCATCATCATCATCATCATCATCATCATCATCATGCGTTCGATGAGGAGGACGAGTCGGCTTATTCTGAAGTCGAGGAAGATCATGATTGA

Protein sequence

MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFDEEDESAYSEVEEDHD
Homology
[Close]
BLAST of Cp4.1LG08g13880 vs. Swiss-Prot
Match: ZWIP2_ARATH (Zinc finger protein WIP2 OS=Arabidopsis thaliana GN=WIP2 PE=1 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.8e-119
Identity = 239/406 (58.87%), Postives = 272/406 (67.00%), Query Frame = 1 

Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNP---------PSSNPPPNFFH------------- 60
           M DP +NFFTD FK N    FHH+ N          P   PP +FF              
Sbjct: 1   MTDPYSNFFTDWFKSN---PFHHYPNSSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPP 60

Query: 61  -APPSSPPLRQALPLLRLSPTRSSQDHH------LSFTSSSAMEID-----NNNNHNNDN 120
             PP SPPLR+ALPLL LSP    QDHH      +    S++M++D      +++HN D+
Sbjct: 61  PTPPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSMDVDYDHHHQDDHHNLDD 120

Query: 121 EDVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED---------- 180
           +D  VTVALHIGLPS +A EMA+LL+  +++ +       E++  ++D D          
Sbjct: 121 DDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGG 180

Query: 181 -EEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240
            E+  +  +   G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW
Sbjct: 181 GEDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240

Query: 241 GHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300
           GHGSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHG
Sbjct: 241 GHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300

Query: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNS 359
           IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  
Sbjct: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGI 360

[Close]
BLAST of Cp4.1LG08g13880 vs. Swiss-Prot
Match: ZWIP4_ARATH (Zinc finger protein WIP4 OS=Arabidopsis thaliana GN=WIP4 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.4e-94
Identity = 181/318 (56.92%), Postives = 223/318 (70.13%), Query Frame = 1 

Query: 5   STNFFTDLFK-FNYPTNFHHHHNP--PSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRSS 64
           S N+ T L + +N   +F++ H    P+ N  PN     P SPPLR+ALPLL LSP    
Sbjct: 83  SFNYATSLSRIYNSHDSFYYPHQTTNPNINENPNL--TSPDSPPLREALPLLSLSPIHKH 142

Query: 65  QD---HHLSFTSSSAMEIDNNNNHNNDNEDV---SVTVALHIGLPS---SNASEMATLLV 124
           Q+   +H  +      E  +N+N  +  +D     VTV LH+GLP+     +S    +L 
Sbjct: 143 QEPTANHHEYYFMETTETSSNSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLD 202

Query: 125 SDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGP 184
           S ++ +   +   ++ LE     D + +  G+           +   +WIPTPSQIL+GP
Sbjct: 203 STDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGN-------HLHHFWIPTPSQILMGP 262

Query: 185 TQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNI 244
           TQFSCP+CFKTFNRYNNMQMHMWGHGSQYR+GPESLRGTQPT ML+LPCYCC+PGC+NNI
Sbjct: 263 TQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNI 322

Query: 245 DHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSD 304
           DHPRA+PLKDFRTLQTHYKRKHG++PF CR+CGKAFAV+GDWRTHEKNCGKLWYC CGSD
Sbjct: 323 DHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSD 382

Query: 305 FKHKRSLKDHIKAFGNGH 311
           FKHKRSLKDH+KAFGNGH
Sbjct: 383 FKHKRSLKDHVKAFGNGH 391

[Close]
BLAST of Cp4.1LG08g13880 vs. Swiss-Prot
Match: ZWIP5_ARATH (Zinc finger protein WIP5 OS=Arabidopsis thaliana GN=WIP5 PE=2 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 4.1e-94
Identity = 189/332 (56.93%), Postives = 227/332 (68.37%), Query Frame = 1 

Query: 1   MDDPS-TNFFT---DLFKFNYPTNFHHHHNPP-----SSNPPPNFFH------APPSSPP 60
           M +P+ +N F    D   FNY T+  + +N       S+   PN+ +        P+SPP
Sbjct: 1   MSNPACSNLFNNGCDHNSFNYSTSLSYIYNSHGSYYYSNTTNPNYINHTHTTSTSPNSPP 60

Query: 61  LRQALPLLRLSPTR--SSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSN 120
           LR+ALPLL LSP R    QD H    +          + +N  +D  VTV LH+GLP+  
Sbjct: 61  LREALPLLSLSPIRHQEQQDQHYFMDTHQI-------SSSNFLDDPLVTVDLHLGLPNYG 120

Query: 121 ASE-MATLLVSDNNNQNEEEDQ---LEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQ 180
             E + + +  D     +++D    +E  +E   D+D++                L++G 
Sbjct: 121 VGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHH------------GDLHRGH 180

Query: 181 -YWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLR 240
            YWIPTPSQILIGPTQF+CP+CFKTFNRYNNMQMHMWGHGSQYR+GPESLRGTQPTGMLR
Sbjct: 181 HYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLR 240

Query: 241 LPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHE 300
           LPC+CC+PGC+NNIDHPRAKPLKDFRTLQTHYKRKHG KPF CR CGKAFAV+GDWRTHE
Sbjct: 241 LPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHE 300

Query: 301 KNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH 311
           KNCGKLWYC CGSDFKHKRSLKDH+KAFGNGH
Sbjct: 301 KNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 313

[Close]
BLAST of Cp4.1LG08g13880 vs. Swiss-Prot
Match: ZWIP6_ARATH (Zinc finger protein WIP6 OS=Arabidopsis thaliana GN=WIP6 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.3e-81
Identity = 134/173 (77.46%), Postives = 153/173 (88.44%), Query Frame = 1 

Query: 145 TISGFSLSSRLN--KGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYR 204
           T+SG +    L   +GQYWIP+ SQIL+GPTQFSC VC KTFNR+NNMQMHMWGHGSQYR
Sbjct: 69  TLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYR 128

Query: 205 RGPESLRGTQ-PTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMC 264
           +GPESLRGT+  + +LRLPCYCC+ GC+NNIDHPR+KPLKDFRTLQTHYKRKHG KPF C
Sbjct: 129 KGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRC 188

Query: 265 R-KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAY 314
           R KC K FAVRGDWRTHEKNCGKLW+C+CGSDFKHKRSLKDH++AFG+GHAA+
Sbjct: 189 RKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAH 241

[Close]
BLAST of Cp4.1LG08g13880 vs. Swiss-Prot
Match: TT1_ARATH (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.8e-78
Identity = 143/244 (58.61%), Postives = 161/244 (65.98%), Query Frame = 1 

Query: 75  EIDNNNNHNNDNEDVSVTVALHIGLPS-SNASEMATLLVSDNNNQNEEEDQLEEELEEEE 134
           E         + ED  V V LHIGLP     S  A  L   N  +    D          
Sbjct: 67  EEGEQEEEEEEEEDREVDVDLHIGLPGFGKPSNDAKQLKKRNGKEIATYD---------- 126

Query: 135 DEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMH 194
                        +G  + + L+   YWIP P QILIG T FSC VCFKTFNRYNN+QMH
Sbjct: 127 -------------AGKGIENELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMH 186

Query: 195 MWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRK 254
           MWGHGSQYR+GPESL+GTQP  ML +PCYCC  GCRN+IDHPR+KPLKDFRTLQTHYKRK
Sbjct: 187 MWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRK 246

Query: 255 HGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAY 314
           HG KPF CR CGK  AV+GDWRTHEKNCGK W C+CGSDFKHKRSLKDH+KAFG+GH  Y
Sbjct: 247 HGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPY 287

Query: 315 NSNI 318
            + +
Sbjct: 307 PTGL 287

[Close]
BLAST of Cp4.1LG08g13880 vs. TrEMBL
Match: A0A0A0LEJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G810580 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 4.3e-127
Identity = 261/377 (69.23%), Postives = 286/377 (75.86%), Query Frame = 1 

Query: 1   MDDPSTNFF-TDLFKFNYPTNFHHHHNPPSSN----------PPPNFF----HAPP--SS 60
           MDDPSTNFF T+LFKFN PT    H +  SS+          PPPNFF    HAPP  SS
Sbjct: 1   MDDPSTNFFFTNLFKFNSPTTTSFHPSSSSSSSDPLRLPPPPPPPNFFPTFHHAPPPPSS 60

Query: 61  PPLRQALPLLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSN 120
           PPLRQALPLLRLSPTRSS        +++  E+D+      + E+  + VALHIGLPS  
Sbjct: 61  PPLRQALPLLRLSPTRSSSQEK----NNNIKELDD------EKEETLMRVALHIGLPSPR 120

Query: 121 ASEMATLLVSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLS-SRLNKGQYWI 180
             E+         ++ EE+ ++E E EEE +E EE+++  + ISG  LS SRLNKGQYWI
Sbjct: 121 DQEI--------EDEEEEDQEIEYEEEEELEELEEEEEEEVAISGLCLSNSRLNKGQYWI 180

Query: 181 PTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCY 240
           PTPSQILIGPTQFSCPVC+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCY
Sbjct: 181 PTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCY 240

Query: 241 CCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG 300
           CCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG
Sbjct: 241 CCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG 300

Query: 301 KLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAF 359
           KLWYCICGSDFKHKRSLKDHIKAFGNGHAAYN N NNN          H H  HH    F
Sbjct: 301 KLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNHNHNNN------NPDLHLHRLHHRRQRF 353

[Close]
BLAST of Cp4.1LG08g13880 vs. TrEMBL
Match: V4L201_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10006035mg PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.4e-117
Identity = 241/406 (59.36%), Postives = 275/406 (67.73%), Query Frame = 1 

Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNP----PSSNPPP-----NFFH------------- 60
           M DP +NFFTD FK N    FHH+ N     PS +PPP     +FF              
Sbjct: 1   MTDPYSNFFTDWFKSN---RFHHYPNSSSTNPSPSPPPPPPTSSFFFFPQSGDLRRPPTP 60

Query: 61  -APPSSPPLRQALPLLRLSPTRSSQDHH---LSFTSSSAMEID--------NNNNHNNDN 120
             PP SPPLR+ALPLL LSP    QDHH   +    S++M++D        + ++HN D+
Sbjct: 61  LTPPPSPPLREALPLLSLSPANKQQDHHDHLIQEPPSTSMDVDYDHHHHHHHQDDHNLDD 120

Query: 121 EDVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED---------- 180
           +D  VTVALHIGLPS +A EMA+LL+  +++ +       E + +++D D          
Sbjct: 121 DDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEIINDKKDLDNDYPHGAAGG 180

Query: 181 -EEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240
            E+  +  +   G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW
Sbjct: 181 GEDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240

Query: 241 GHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300
           GHGSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHG
Sbjct: 241 GHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300

Query: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNS 359
           IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  
Sbjct: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGI 360

[Close]
BLAST of Cp4.1LG08g13880 vs. TrEMBL
Match: A0A0D3CUE3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.4e-117
Identity = 235/399 (58.90%), Postives = 272/399 (68.17%), Query Frame = 1 

Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHN----PPSSNPPPNFFH--------------APPS 60
           M DP +NFFTD FK N    FHH+ N    PP   PP +FF                PPS
Sbjct: 1   MTDPHSNFFTDWFKSN---PFHHYPNFSTNPPPLPPPSSFFFFPHSGDLCRPPPPPTPPS 60

Query: 61  SPPLRQALPLLRLSPTRSSQDHH---LSFTSSSAMEIDN------NNNHNNDNEDVSVTV 120
           SPPLR+ALPLL LSP    QDHH   +   +S+++++D+       ++HN+D+ D  +TV
Sbjct: 61  SPPLREALPLLSLSPANKQQDHHGHLIQEPTSTSIDVDDYYHHHHQDDHNHDDHDHDITV 120

Query: 121 ALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED-----------EEQQQA 180
           ALHIGLPS +  EMA+ L   +++ +       E +  ++D D           E+  + 
Sbjct: 121 ALHIGLPSLSTQEMASFLTLSSSSSSSRTTHHHENMNNQKDLDNDYHHEGTGGGEDDDED 180

Query: 181 GITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYR 240
            +   G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGS+YR
Sbjct: 181 SVGGDGACRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSEYR 240

Query: 241 RGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCR 300
           +GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCR
Sbjct: 241 KGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCR 300

Query: 301 KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNNCD 359
           KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  +      
Sbjct: 301 KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGID------ 360

[Close]
BLAST of Cp4.1LG08g13880 vs. TrEMBL
Match: R0HGD5_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10017428mg PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.2e-116
Identity = 239/405 (59.01%), Postives = 272/405 (67.16%), Query Frame = 1 

Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHN----------PPSSNPPPNFFH------------ 60
           M DP +NFFTD FK N    FHH+ +          PP S P P+ F             
Sbjct: 1   MTDPYSNFFTDWFKSN---PFHHYPSSSSNPSPSNLPPPSLPTPSSFFFFPQSGDLRRPP 60

Query: 61  ---APPSSPPLRQALPLLRLSPTRSSQDHHLSF--------TSSSAMEIDNNNNHNNDNE 120
               PP SPPLR+ALPLL LSP    QDHH S         ++S  ++ D+ ++HN D++
Sbjct: 61  PLPTPPPSPPLREALPLLSLSPANKQQDHHHSHDHQNQEPPSTSMDVDYDHQDDHNLDDD 120

Query: 121 DVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED----------- 180
           D  VTVALHIGLPS +A EMA+LL+  +++ +       ++L  ++D D           
Sbjct: 121 DHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTLHHDDLNHKKDLDHDYSHGAAEGG 180

Query: 181 EEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWG 240
           E+  +  +   G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWG
Sbjct: 181 EDDDEDLVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWG 240

Query: 241 HGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGI 300
           HGSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHGI
Sbjct: 241 HGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGI 300

Query: 301 KPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSN 359
           KPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  +
Sbjct: 301 KPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGID 360

[Close]
BLAST of Cp4.1LG08g13880 vs. TrEMBL
Match: D7LVV4_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486217 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.5e-116
Identity = 238/404 (58.91%), Postives = 273/404 (67.57%), Query Frame = 1 

Query: 1   MDDPSTNFFTDLFKFN----YP---TNFHHHHNPPSSNPPPNFFH--------------A 60
           M DP +NFFTD FK N    YP   TN   H  P    PP +FF                
Sbjct: 1   MTDPYSNFFTDWFKSNPFHHYPNSSTNPSPHPLPLPLPPPSSFFFFPQSGDLRRPPPPPT 60

Query: 61  PPSSPPLRQALPLLRLSPTRSSQDHH------LSFTSSSAMEIDNNNNHNNDN-----ED 120
           PP SPPLR+ALPLL LSP    QDHH      +    S++M++D +++H +D+     +D
Sbjct: 61  PPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSMDVDYDHHHQDDHHNLEDDD 120

Query: 121 VSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED-----------E 180
             VTVALHIGLPS +A EMA+LL+  +++ +       +++  ++D D           E
Sbjct: 121 HDVTVALHIGLPSPSAHEMASLLMMSSSSSSSRTTHHHDDMNHKKDLDHDYSHGATGGGE 180

Query: 181 EQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGH 240
           +  +  + + G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGH
Sbjct: 181 DDDEDSVGVDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGH 240

Query: 241 GSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIK 300
           GSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIK
Sbjct: 241 GSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIK 300

Query: 301 PFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNI 359
           PFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  + 
Sbjct: 301 PFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGID- 360

[Close]
BLAST of Cp4.1LG08g13880 vs. TAIR10
Match: AT3G57670.1 (AT3G57670.1 C2H2-type zinc finger family protein)

HSP 1 Score: 429.9 bits (1104), Expect = 1.6e-120
Identity = 239/406 (58.87%), Postives = 272/406 (67.00%), Query Frame = 1 

Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNP---------PSSNPPPNFFH------------- 60
           M DP +NFFTD FK N    FHH+ N          P   PP +FF              
Sbjct: 1   MTDPYSNFFTDWFKSN---PFHHYPNSSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPP 60

Query: 61  -APPSSPPLRQALPLLRLSPTRSSQDHH------LSFTSSSAMEID-----NNNNHNNDN 120
             PP SPPLR+ALPLL LSP    QDHH      +    S++M++D      +++HN D+
Sbjct: 61  PTPPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSMDVDYDHHHQDDHHNLDD 120

Query: 121 EDVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED---------- 180
           +D  VTVALHIGLPS +A EMA+LL+  +++ +       E++  ++D D          
Sbjct: 121 DDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGG 180

Query: 181 -EEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240
            E+  +  +   G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW
Sbjct: 181 GEDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240

Query: 241 GHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300
           GHGSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHG
Sbjct: 241 GHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300

Query: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNS 359
           IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  
Sbjct: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGI 360

[Close]
BLAST of Cp4.1LG08g13880 vs. TAIR10
Match: AT3G20880.1 (AT3G20880.1 WIP domain protein 4)

HSP 1 Score: 347.8 bits (891), Expect = 7.9e-96
Identity = 181/318 (56.92%), Postives = 223/318 (70.13%), Query Frame = 1 

Query: 5   STNFFTDLFK-FNYPTNFHHHHNP--PSSNPPPNFFHAPPSSPPLRQALPLLRLSPTRSS 64
           S N+ T L + +N   +F++ H    P+ N  PN     P SPPLR+ALPLL LSP    
Sbjct: 83  SFNYATSLSRIYNSHDSFYYPHQTTNPNINENPNL--TSPDSPPLREALPLLSLSPIHKH 142

Query: 65  QD---HHLSFTSSSAMEIDNNNNHNNDNEDV---SVTVALHIGLPS---SNASEMATLLV 124
           Q+   +H  +      E  +N+N  +  +D     VTV LH+GLP+     +S    +L 
Sbjct: 143 QEPTANHHEYYFMETTETSSNSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLD 202

Query: 125 SDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGP 184
           S ++ +   +   ++ LE     D + +  G+           +   +WIPTPSQIL+GP
Sbjct: 203 STDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGN-------HLHHFWIPTPSQILMGP 262

Query: 185 TQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNI 244
           TQFSCP+CFKTFNRYNNMQMHMWGHGSQYR+GPESLRGTQPT ML+LPCYCC+PGC+NNI
Sbjct: 263 TQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNI 322

Query: 245 DHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSD 304
           DHPRA+PLKDFRTLQTHYKRKHG++PF CR+CGKAFAV+GDWRTHEKNCGKLWYC CGSD
Sbjct: 323 DHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSD 382

Query: 305 FKHKRSLKDHIKAFGNGH 311
           FKHKRSLKDH+KAFGNGH
Sbjct: 383 FKHKRSLKDHVKAFGNGH 391

[Close]
BLAST of Cp4.1LG08g13880 vs. TAIR10
Match: AT1G51220.1 (AT1G51220.1 WIP domain protein 5)

HSP 1 Score: 346.3 bits (887), Expect = 2.3e-95
Identity = 189/332 (56.93%), Postives = 227/332 (68.37%), Query Frame = 1 

Query: 1   MDDPS-TNFFT---DLFKFNYPTNFHHHHNPP-----SSNPPPNFFH------APPSSPP 60
           M +P+ +N F    D   FNY T+  + +N       S+   PN+ +        P+SPP
Sbjct: 1   MSNPACSNLFNNGCDHNSFNYSTSLSYIYNSHGSYYYSNTTNPNYINHTHTTSTSPNSPP 60

Query: 61  LRQALPLLRLSPTR--SSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSN 120
           LR+ALPLL LSP R    QD H    +          + +N  +D  VTV LH+GLP+  
Sbjct: 61  LREALPLLSLSPIRHQEQQDQHYFMDTHQI-------SSSNFLDDPLVTVDLHLGLPNYG 120

Query: 121 ASE-MATLLVSDNNNQNEEEDQ---LEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQ 180
             E + + +  D     +++D    +E  +E   D+D++                L++G 
Sbjct: 121 VGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHH------------GDLHRGH 180

Query: 181 -YWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLR 240
            YWIPTPSQILIGPTQF+CP+CFKTFNRYNNMQMHMWGHGSQYR+GPESLRGTQPTGMLR
Sbjct: 181 HYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLR 240

Query: 241 LPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHE 300
           LPC+CC+PGC+NNIDHPRAKPLKDFRTLQTHYKRKHG KPF CR CGKAFAV+GDWRTHE
Sbjct: 241 LPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHE 300

Query: 301 KNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH 311
           KNCGKLWYC CGSDFKHKRSLKDH+KAFGNGH
Sbjct: 301 KNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 313

[Close]
BLAST of Cp4.1LG08g13880 vs. TAIR10
Match: AT1G13290.1 (AT1G13290.1 C2H2-like zinc finger protein)

HSP 1 Score: 303.9 bits (777), Expect = 1.3e-82
Identity = 134/173 (77.46%), Postives = 153/173 (88.44%), Query Frame = 1 

Query: 145 TISGFSLSSRLN--KGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYR 204
           T+SG +    L   +GQYWIP+ SQIL+GPTQFSC VC KTFNR+NNMQMHMWGHGSQYR
Sbjct: 69  TLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYR 128

Query: 205 RGPESLRGTQ-PTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMC 264
           +GPESLRGT+  + +LRLPCYCC+ GC+NNIDHPR+KPLKDFRTLQTHYKRKHG KPF C
Sbjct: 129 KGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRC 188

Query: 265 R-KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAY 314
           R KC K FAVRGDWRTHEKNCGKLW+C+CGSDFKHKRSLKDH++AFG+GHAA+
Sbjct: 189 RKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAH 241

[Close]
BLAST of Cp4.1LG08g13880 vs. TAIR10
Match: AT1G34790.1 (AT1G34790.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 294.3 bits (752), Expect = 1.0e-79
Identity = 143/244 (58.61%), Postives = 161/244 (65.98%), Query Frame = 1 

Query: 75  EIDNNNNHNNDNEDVSVTVALHIGLPS-SNASEMATLLVSDNNNQNEEEDQLEEELEEEE 134
           E         + ED  V V LHIGLP     S  A  L   N  +    D          
Sbjct: 67  EEGEQEEEEEEEEDREVDVDLHIGLPGFGKPSNDAKQLKKRNGKEIATYD---------- 126

Query: 135 DEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMH 194
                        +G  + + L+   YWIP P QILIG T FSC VCFKTFNRYNN+QMH
Sbjct: 127 -------------AGKGIENELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMH 186

Query: 195 MWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRK 254
           MWGHGSQYR+GPESL+GTQP  ML +PCYCC  GCRN+IDHPR+KPLKDFRTLQTHYKRK
Sbjct: 187 MWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRK 246

Query: 255 HGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAY 314
           HG KPF CR CGK  AV+GDWRTHEKNCGK W C+CGSDFKHKRSLKDH+KAFG+GH  Y
Sbjct: 247 HGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPY 287

Query: 315 NSNI 318
            + +
Sbjct: 307 PTGL 287

[Close]
BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: gi|778684886|ref|XP_011652116.1| (PREDICTED: zinc finger protein WIP2-like [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 6.2e-127
Identity = 261/377 (69.23%), Postives = 286/377 (75.86%), Query Frame = 1 

Query: 1   MDDPSTNFF-TDLFKFNYPTNFHHHHNPPSSN----------PPPNFF----HAPP--SS 60
           MDDPSTNFF T+LFKFN PT    H +  SS+          PPPNFF    HAPP  SS
Sbjct: 1   MDDPSTNFFFTNLFKFNSPTTTSFHPSSSSSSSDPLRLPPPPPPPNFFPTFHHAPPPPSS 60

Query: 61  PPLRQALPLLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSN 120
           PPLRQALPLLRLSPTRSS        +++  E+D+      + E+  + VALHIGLPS  
Sbjct: 61  PPLRQALPLLRLSPTRSSSQEK----NNNIKELDD------EKEETLMRVALHIGLPSPR 120

Query: 121 ASEMATLLVSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLS-SRLNKGQYWI 180
             E+         ++ EE+ ++E E EEE +E EE+++  + ISG  LS SRLNKGQYWI
Sbjct: 121 DQEI--------EDEEEEDQEIEYEEEEELEELEEEEEEEVAISGLCLSNSRLNKGQYWI 180

Query: 181 PTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCY 240
           PTPSQILIGPTQFSCPVC+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCY
Sbjct: 181 PTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCY 240

Query: 241 CCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG 300
           CCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG
Sbjct: 241 CCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG 300

Query: 301 KLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAF 359
           KLWYCICGSDFKHKRSLKDHIKAFGNGHAAYN N NNN          H H  HH    F
Sbjct: 301 KLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNHNHNNN------NPDLHLHRLHHRRQRF 353

[Close]
BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: gi|659084833|ref|XP_008443097.1| (PREDICTED: protein TRANSPARENT TESTA 1-like [Cucumis melo])

HSP 1 Score: 460.7 bits (1184), Expect = 2.4e-126
Identity = 258/375 (68.80%), Postives = 287/375 (76.53%), Query Frame = 1 

Query: 1   MDDPSTNFF-TDLFKFNYPTNFHHHHNPPSSNPP--------PNFF----HAP---PSSP 60
           MDDPSTNFF T+LFKFN PT    H +  SS+ P        PNFF    HAP   PSSP
Sbjct: 1   MDDPSTNFFFTNLFKFNSPTTTSFHPSSSSSSDPLLPPPLPQPNFFPTFHHAPPPPPSSP 60

Query: 61  PLRQALPLLRLSPTRSSQDHHLSFTSSSAMEIDNNNNHNNDNEDVSVTVALHIGLPSSNA 120
           PLRQALPLLRLSPTRSS        +++  E+D      ++ E+  + VALHIGLPSS  
Sbjct: 61  PLRQALPLLRLSPTRSSSQE----KNNNIKELD------DEKEETLMRVALHIGLPSSRD 120

Query: 121 SEMATLLVSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLS-SRLNKGQYWIP 180
            E+         ++ EE+ ++E E EEE +E EE+++  + ISG  LS SRLNKGQYWIP
Sbjct: 121 QEI--------EDEEEEDQEIEYEEEEELEELEEEEEEEVAISGLCLSNSRLNKGQYWIP 180

Query: 181 TPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYC 240
           TPSQILIGPTQFSCPVC+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYC
Sbjct: 181 TPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYC 240

Query: 241 CSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGK 300
           CSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGK
Sbjct: 241 CSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGK 300

Query: 301 LWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNNCDHRQQQHHHHHHHHHHHHHAFD 359
           LWYCICGSDFKHKRSLKDHIKAFGNGHAAYN + NNN ++    H H  HH        +
Sbjct: 301 LWYCICGSDFKHKRSLKDHIKAFGNGHAAYNHSSNNNNNNNPDLHLHRLHHRRQRFD--N 355

[Close]
BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: gi|1009170343|ref|XP_015866148.1| (PREDICTED: zinc finger protein WIP2 [Ziziphus jujuba])

HSP 1 Score: 436.8 bits (1122), Expect = 3.6e-119
Identity = 238/387 (61.50%), Postives = 273/387 (70.54%), Query Frame = 1 

Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPSSNPPP----------------NFFHAP---P 60
           M DP +NFFT LFKFN    FHH  +PPS+ PPP                N F  P   P
Sbjct: 1   MADPYSNFFTGLFKFN---PFHHDSSPPSNPPPPLPLPPPQTPFPHSFFINHFQTPSSSP 60

Query: 61  SSPPLRQALPLLRLSPTRSSQ------DHHLSFTSSSAMEIDNNNNHNNDNED--VSVTV 120
            SPPLR+ALPLL LSPT+         + H S T+++AM++ +      D ED   +VTV
Sbjct: 61  PSPPLREALPLLSLSPTKHEYKQEQLLEDHYSTTTTTAMDVLHKGKEEEDEEDDEETVTV 120

Query: 121 ALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDEDEEQQQAG--ITISGFSL 180
           ALHIGLPS +A+EMA++L +++++          EL  + ++D      G     SG+ +
Sbjct: 121 ALHIGLPSPSAAEMASVLSANSSS----------ELTADNNKDHGGDHGGGDQDSSGYPI 180

Query: 181 SSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGT 240
            SRLNKGQYWIPTPSQILIGPTQFSCPVC+KTFNRYNNMQMHMWGHGSQYR+GPESLRGT
Sbjct: 181 MSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGT 240

Query: 241 QPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVR 300
           QPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVR
Sbjct: 241 QPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVR 300

Query: 301 GDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNNCDHRQQQHHHH 359
           GDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAY  +               
Sbjct: 301 GDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYGID--------------- 349

[Close]
BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: gi|727503228|ref|XP_010427649.1| (PREDICTED: protein TRANSPARENT TESTA 1-like [Camelina sativa])

HSP 1 Score: 431.8 bits (1109), Expect = 1.2e-117
Identity = 240/406 (59.11%), Postives = 271/406 (66.75%), Query Frame = 1 

Query: 1   MDDPSTNFFTDLFKFNYPTNFHHH---------HNPPSSNPPPNFFH------------- 60
           M DP +NFFTD FK N    FHH+         H PP   PP +FF              
Sbjct: 1   MTDPYSNFFTDWFKSN---PFHHYPSSSANPSPHPPPPPLPPSSFFFFPQSGDLRRPPPP 60

Query: 61  -APPSSPPLRQALPLLRLSPTRSSQDHH------LSFTSSSAMEID-----NNNNHNNDN 120
             PP SPPLR+ALPLL LSP    QDHH      +    S++M++D     + ++HN D+
Sbjct: 61  LTPPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSMDVDYDHHLHQDDHNLDD 120

Query: 121 EDVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED---------- 180
           +D  VTVALHIGLPS +A EMA+LL+  +++ +       E++   +D D          
Sbjct: 121 DDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHREDMNHRKDLDQYCSHGAAEG 180

Query: 181 -EEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240
            E+     +   G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW
Sbjct: 181 GEDDDDDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMW 240

Query: 241 GHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300
           GHGSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHG
Sbjct: 241 GHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHG 300

Query: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNS 359
           IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  
Sbjct: 301 IKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGI 360

[Close]
BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match: gi|922509096|ref|XP_013590861.1| (PREDICTED: zinc finger protein WIP2-like [Brassica oleracea var. oleracea])

HSP 1 Score: 431.0 bits (1107), Expect = 2.0e-117
Identity = 235/399 (58.90%), Postives = 272/399 (68.17%), Query Frame = 1 

Query: 1   MDDPSTNFFTDLFKFNYPTNFHHHHN----PPSSNPPPNFFH--------------APPS 60
           M DP +NFFTD FK N    FHH+ N    PP   PP +FF                PPS
Sbjct: 1   MTDPHSNFFTDWFKSN---PFHHYPNFSTNPPPLPPPSSFFFFPHSGDLCRPPPPPTPPS 60

Query: 61  SPPLRQALPLLRLSPTRSSQDHH---LSFTSSSAMEIDN------NNNHNNDNEDVSVTV 120
           SPPLR+ALPLL LSP    QDHH   +   +S+++++D+       ++HN+D+ D  +TV
Sbjct: 61  SPPLREALPLLSLSPANKQQDHHGHLIQEPTSTSIDVDDYYHHHHQDDHNHDDHDHDITV 120

Query: 121 ALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDED-----------EEQQQA 180
           ALHIGLPS +  EMA+ L   +++ +       E +  ++D D           E+  + 
Sbjct: 121 ALHIGLPSLSTQEMASFLTLSSSSSSSRTTHHHENMNNQKDLDNDYHHEGTGGGEDDDED 180

Query: 181 GITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYR 240
            +   G    SRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGS+YR
Sbjct: 181 SVGGDGACRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSEYR 240

Query: 241 RGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCR 300
           +GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCR
Sbjct: 241 KGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCR 300

Query: 301 KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNNCD 359
           KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGH AY  +      
Sbjct: 301 KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGID------ 360

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g13880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZWIP2_ARATH2.8e-11958.87Zinc finger protein WIP2 OS=Arabidopsis thaliana GN=WIP2 PE=1 SV=1[more]
ZWIP4_ARATH1.4e-9456.92Zinc finger protein WIP4 OS=Arabidopsis thaliana GN=WIP4 PE=2 SV=1[more]
ZWIP5_ARATH4.1e-9456.93Zinc finger protein WIP5 OS=Arabidopsis thaliana GN=WIP5 PE=2 SV=1[more]
ZWIP6_ARATH2.3e-8177.46Zinc finger protein WIP6 OS=Arabidopsis thaliana GN=WIP6 PE=2 SV=1[more]
TT1_ARATH1.8e-7858.61Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=1 SV=1[more]
BLAST of Cp4.1LG08g13880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEJ3_CUCSA4.3e-12769.23Uncharacterized protein OS=Cucumis sativus GN=Csa_3G810580 PE=4 SV=1[more]
V4L201_EUTSA1.4e-11759.36Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10006035mg PE=4 SV=1[more]
A0A0D3CUE3_BRAOL1.4e-11758.90Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
R0HGD5_9BRAS1.2e-11659.01Uncharacterized protein OS=Capsella rubella GN=CARUB_v10017428mg PE=4 SV=1[more]
D7LVV4_ARALL1.5e-11658.91Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... [more]
BLAST of Cp4.1LG08g13880 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57670.11.6e-12058.87 C2H2-type zinc finger family protein[more]
AT3G20880.17.9e-9656.92 WIP domain protein 4[more]
AT1G51220.12.3e-9556.93 WIP domain protein 5[more]
AT1G13290.11.3e-8277.46 C2H2-like zinc finger protein[more]
AT1G34790.11.0e-7958.61 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of Cp4.1LG08g13880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778684886|ref|XP_011652116.1|6.2e-12769.23PREDICTED: zinc finger protein WIP2-like [Cucumis sativus][more]
gi|659084833|ref|XP_008443097.1|2.4e-12668.80PREDICTED: protein TRANSPARENT TESTA 1-like [Cucumis melo][more]
gi|1009170343|ref|XP_015866148.1|3.6e-11961.50PREDICTED: zinc finger protein WIP2 [Ziziphus jujuba][more]
gi|727503228|ref|XP_010427649.1|1.2e-11759.11PREDICTED: protein TRANSPARENT TESTA 1-like [Camelina sativa][more]
gi|922509096|ref|XP_013590861.1|2.0e-11758.90PREDICTED: zinc finger protein WIP2-like [Brassica oleracea var. oleracea][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR015880Zinc finger, C2H2-like
IPR013087Znf_C2H2_type
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1990058 fruit replum development
biological_process GO:0009827 plant-type cell wall modification
biological_process GO:0010468 regulation of gene expression
biological_process GO:0001709 cell fate determination
biological_process GO:0044702 single organism reproductive process
biological_process GO:0048608 reproductive structure development
biological_process GO:0009791 post-embryonic development
biological_process GO:0016043 cellular component organization
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010500 transmitting tissue development
biological_process GO:0009860 pollen tube growth
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g13880.1Cp4.1LG08g13880.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 177..197
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 259..279
score: 8.808coord: 175..202
score:
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 175..194
score: 5.1E-6coord: 246..279
score: 9.
IPR015880Zinc finger, C2H2-likeSMARTSM00355c2h2final6coord: 259..279
score: 49.0coord: 175..197
score:
NoneNo IPR availableunknownCoilCoilcoord: 108..142
scor
NoneNo IPR availablePANTHERPTHR10593SERINE/THREONINE-PROTEIN KINASE RIOcoord: 71..306
score: 3.4
NoneNo IPR availablePANTHERPTHR10593:SF27SUBFAMILY NOT NAMEDcoord: 71..306
score: 3.4
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 241..279
score: 1.8