Cp4.1LG08g08440 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAAGGAAACCATCCAAGAATGCGTCTGAGTATATCAGCTTCATTACTGGCGAGGTCAACGAGCGATGCCAAAGGGAGCAGCGTAAGACAGTGATAGCAGAGGATGTCCTTTGGGTCATGGGGAAGCTAGGGTTTGACGATTACATTGAGCCATTAATTATCTTTGATGGATCATCTCTACTCGAGTGA ATGCAAAGGAAACCATCCAAGAATGCGTCTGAGTATATCAGCTTCATTACTGGCGAGGTCAACGAGCGATGCCAAAGGGAGCAGCGTAAGACAGTGATAGCAGAGGATGTCCTTTGGGTCATGGGGAAGCTAGGGTTTGACGATTACATTGAGCCATTAATTATCTTTGATGGATCATCTCTACTCGAGTGA ATGCAAAGGAAACCATCCAAGAATGCGTCTGAGTATATCAGCTTCATTACTGGCGAGGTCAACGAGCGATGCCAAAGGGAGCAGCGTAAGACAGTGATAGCAGAGGATGTCCTTTGGGTCATGGGGAAGCTAGGGTTTGACGATTACATTGAGCCATTAATTATCTTTGATGGATCATCTCTACTCGAGTGA MQRKPSKNASEYISFITGEVNERCQREQRKTVIAEDVLWVMGKLGFDDYIEPLIIFDGSSLLE
BLAST of Cp4.1LG08g08440 vs. Swiss-Prot
Match: NFYB6_ARATH (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana GN=NFYB6 PE=1 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 3.5e-17 Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. Swiss-Prot
Match: NFYB9_ARATH (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana GN=NFYB9 PE=1 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 2.3e-16 Identity = 35/47 (74.47%), Postives = 42/47 (89.36%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. Swiss-Prot
Match: NFYB3_ARATH (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 5.8e-12 Identity = 28/47 (59.57%), Postives = 40/47 (85.11%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. Swiss-Prot
Match: NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NFYB3 PE=1 SV=2) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-11 Identity = 28/47 (59.57%), Postives = 39/47 (82.98%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. Swiss-Prot
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-11 Identity = 28/47 (59.57%), Postives = 39/47 (82.98%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TrEMBL
Match: A0A061FC04_THECC (Ccaat-binding transcription factor subunit A, putative OS=Theobroma cacao GN=TCM_030636 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.6e-16 Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TrEMBL
Match: A0A0E3N6S2_GOSBA (Leafy cotyledon 1A OS=Gossypium barbadense GN=LEC1A PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.5e-16 Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TrEMBL
Match: A0A0D2SEP9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G152500 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.5e-16 Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TrEMBL
Match: A0A0B0PGM2_GOSAR (Nuclear transcription factor Y subunit B-9-like protein OS=Gossypium arboreum GN=F383_03265 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.5e-16 Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TrEMBL
Match: B9S9S1_RICCO (Ccaat-binding transcription factor subunit A, putative OS=Ricinus communis GN=RCOM_0521850 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.0e-15 Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TAIR10
Match: AT5G47670.1 (AT5G47670.1 nuclear factor Y, subunit B6) HSP 1 Score: 88.2 bits (217), Expect = 2.0e-18 Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TAIR10
Match: AT1G21970.1 (AT1G21970.1 Histone superfamily protein) HSP 1 Score: 85.5 bits (210), Expect = 1.3e-17 Identity = 35/47 (74.47%), Postives = 42/47 (89.36%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TAIR10
Match: AT4G14540.1 (AT4G14540.1 nuclear factor Y, subunit B3) HSP 1 Score: 70.9 bits (172), Expect = 3.3e-13 Identity = 28/47 (59.57%), Postives = 40/47 (85.11%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TAIR10
Match: AT5G47640.1 (AT5G47640.1 nuclear factor Y, subunit B2) HSP 1 Score: 69.3 bits (168), Expect = 9.5e-13 Identity = 26/47 (55.32%), Postives = 40/47 (85.11%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. TAIR10
Match: AT2G38880.8 (AT2G38880.8 nuclear factor Y, subunit B1) HSP 1 Score: 68.6 bits (166), Expect = 1.6e-12 Identity = 28/47 (59.57%), Postives = 39/47 (82.98%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. NCBI nr
Match: gi|590605470|ref|XP_007020494.1| (Ccaat-binding transcription factor subunit A, putative [Theobroma cacao]) HSP 1 Score: 92.8 bits (229), Expect = 2.3e-16 Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. NCBI nr
Match: gi|659096616|ref|XP_008449191.1| (PREDICTED: nuclear transcription factor Y subunit B-9 [Cucumis melo]) HSP 1 Score: 92.4 bits (228), Expect = 3.0e-16 Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. NCBI nr
Match: gi|805305825|gb|AKB11452.1| (leafy cotyledon 1A [Gossypium barbadense]) HSP 1 Score: 91.7 bits (226), Expect = 5.1e-16 Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. NCBI nr
Match: gi|823266462|ref|XP_012465928.1| (PREDICTED: nuclear transcription factor Y subunit B-9 [Gossypium raimondii]) HSP 1 Score: 91.7 bits (226), Expect = 5.1e-16 Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 1
BLAST of Cp4.1LG08g08440 vs. NCBI nr
Match: gi|729331191|ref|XP_010536738.1| (PREDICTED: nuclear transcription factor Y subunit B-9 [Tarenaya hassleriana]) HSP 1 Score: 91.7 bits (226), Expect = 5.1e-16 Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |