Cp4.1LG08g08380 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g08380
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTransmembrane emp24 domain-containing protein
LocationCp4.1LG08 : 6663870 .. 6665259 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGGGAAGTGGGAAGTCAAAATACAGGTTTTTTATTTTCATGGCGGCTTTGTTCATATCATCACACCCAGTTTTGGGGATTAGATTTGTGATTGACAAAGAAGAATGCTTCTCTCACAACGTTGAATTCATTAGAGATACCATTTATCTCTCTTTTGTCGTCGTTAGCGTTCATACCTGGCGACATCATGCTCACAATGGCGTTGATCTTTTGGTGACCACTTTTATCAATTACTCTTCTTTCTTTTTCTCTCTTAGATTCGTCTAGATTGTTTGTATTCATTTGCATGTTTATGAGATGTTTGGCTCGTGAATTAGGGTTAAGACATTGAATCTGATTGTATATACGTGTTGCTGTTGCATACGTTACAGAGATTAAGGACTGAGCCTTTTGTTTTGCACGTATGTATGGGTGAATGAGATTCAAATTAGAGTTCTATGCATTAGGGTTCAAAAATAAGTTTTTTCAATATGTTTGTATTCATTTTTGAATAGACAGTTCTATAAAACTGGCATTTTAGTAACATTTACAGATCATAGATCTGTGATGTGATCTGTTCATCACAGTGACACAAACCTAAATATAATACAAATCAGGCTTTCCCAACTCCAATTTTATAAATTCGAGCATCGTTTTAAGACTCTCAATGTCGAAACTAAGTCATCCGTTCATGTTTTAGTCTTGTTATGATTAAATGTGATTTGCAAAGTACAGGTGAAAGGGCCTTTAGGGGAGAGAATTGAAGAAATTAGAGGGAAAACAAGTGAGAAATTTGAGTTTATTTCTCTTAGAAAAGGGCGATATCACTTCTGCTTCATCAACAACTCACCTCACCAAGAGACCATAGAATTTGATATCCATATCAATCATTACTATGAGTTCTATGATGATGATGAACAACATGTAAAAGATGGTATTAATTCCTTTGATGAACCCTAAAGTTTTTACTTTGAAATTCATACTCCCCATTACTTTTCTGCTCATCTCATTTGGGTTTGAAATGAAATTTACAGAGCATTTGAGCCCTTTATTGGCTCAAATAAAGAAGTTGGGAGAAACCTTAGGCGTTATTGAGTTTGAACAGCAATGGTTAGAGGCACAGACAGAGCGACAAGCCAAAGGTATTGTTCATCTATTAACCCATTTGATATACAATCTATTCCTTTGTATTAATTGAAATATCAGATCTAACCAACAACTTCTAGCATTTAGTAAGTGAAGTACCTTTTTCGCAGTGAATGACGCAATGAGCACAATGGCGATTCTGAAGGCTGTTCTCGAATCAGCAGCGCTCATCGGTGCAAGCAGTCTTCAAGTTTTCCTTCTACGTCGCCTGTTCGAGAAAAAAGTTGGAAGCCTGTATTCGAGCACCTACAGAATATAA

mRNA sequence

ATGGAGATGGGAAGTGGGAAGTCAAAATACAGGTTTTTTATTTTCATGGCGGCTTTGTTCATATCATCACACCCAGTTTTGGGGATTAGATTTGTGATTGACAAAGAAGAATGCTTCTCTCACAACGTTGAATTCATTAGAGATACCATTTATCTCTCTTTTGTCGTCGTTAGCGTTCATACCTGGCGACATCATGCTCACAATGGCGTTGATCTTTTGGTGACCACTTTTATCAATTACTCTTCTTTCTTTTTCTCTCTTAGATTCGTGAAAGGGCCTTTAGGGGAGAGAATTGAAGAAATTAGAGGGAAAACAAGTGAGAAATTTGAGTTTATTTCTCTTAGAAAAGGGCGATATCACTTCTGCTTCATCAACAACTCACCTCACCAAGAGACCATAGAATTTGATATCCATATCAATCATTACTATGAGTTCTATGATGATGATGAACAACATGTAAAAGATGAGCATTTGAGCCCTTTATTGGCTCAAATAAAGAAGTTGGGAGAAACCTTAGGCGTTATTGAGTTTGAACAGCAATGGTTAGAGGCACAGACAGAGCGACAAGCCAAAGTGAATGACGCAATGAGCACAATGGCGATTCTGAAGGCTGTTCTCGAATCAGCAGCGCTCATCGGTGCAAGCAGTCTTCAAGTTTTCCTTCTACGTCGCCTGTTCGAGAAAAAAGTTGGAAGCCTGTATTCGAGCACCTACAGAATATAA

Coding sequence (CDS)

ATGGAGATGGGAAGTGGGAAGTCAAAATACAGGTTTTTTATTTTCATGGCGGCTTTGTTCATATCATCACACCCAGTTTTGGGGATTAGATTTGTGATTGACAAAGAAGAATGCTTCTCTCACAACGTTGAATTCATTAGAGATACCATTTATCTCTCTTTTGTCGTCGTTAGCGTTCATACCTGGCGACATCATGCTCACAATGGCGTTGATCTTTTGGTGACCACTTTTATCAATTACTCTTCTTTCTTTTTCTCTCTTAGATTCGTGAAAGGGCCTTTAGGGGAGAGAATTGAAGAAATTAGAGGGAAAACAAGTGAGAAATTTGAGTTTATTTCTCTTAGAAAAGGGCGATATCACTTCTGCTTCATCAACAACTCACCTCACCAAGAGACCATAGAATTTGATATCCATATCAATCATTACTATGAGTTCTATGATGATGATGAACAACATGTAAAAGATGAGCATTTGAGCCCTTTATTGGCTCAAATAAAGAAGTTGGGAGAAACCTTAGGCGTTATTGAGTTTGAACAGCAATGGTTAGAGGCACAGACAGAGCGACAAGCCAAAGTGAATGACGCAATGAGCACAATGGCGATTCTGAAGGCTGTTCTCGAATCAGCAGCGCTCATCGGTGCAAGCAGTCTTCAAGTTTTCCTTCTACGTCGCCTGTTCGAGAAAAAAGTTGGAAGCCTGTATTCGAGCACCTACAGAATATAA

Protein sequence

MEMGSGKSKYRFFIFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLLVTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETIEFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVNDAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVGSLYSSTYRI
Homology
[Close]
BLAST of Cp4.1LG08g08380 vs. Swiss-Prot
Match: P24B2_ARATH (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana GN=At3g07680 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.2e-50
Identity = 109/218 (50.00%), Postives = 142/218 (65.14%), Query Frame = 1 

Query: 14  IFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLL 73
           I +  L  S    LGIRFVID+EECFSH  E+  DT+++SFVV+   +  H   +GVDL+
Sbjct: 7   IVLLGLLWSFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLV 66

Query: 74  VTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETI 133
           +                 GP GE+I + R + S K +F+  +KG Y FCF N SP+ ETI
Sbjct: 67  I----------------HGPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETI 126

Query: 134 EFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVN 193
           +FD+ + H+  +YD   QH KDEH +PL+ QI KL E L  I+FEQ WLEAQT+RQA VN
Sbjct: 127 DFDVQLGHF-AYYD---QHAKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVN 186

Query: 194 DAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           + MS  A+ KA+ ES ALIGAS LQV+LLRRLFE+K+G
Sbjct: 187 ENMSKRAVHKALFESFALIGASFLQVYLLRRLFERKLG 204

[Close]
BLAST of Cp4.1LG08g08380 vs. Swiss-Prot
Match: P24B3_ARATH (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana GN=At3g22845 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.4e-20
Identity = 67/225 (29.78%), Postives = 109/225 (48.44%), Query Frame = 1 

Query: 7   KSKYRFFIFMAALFISS-HPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHH 66
           ++K   F+ +  + ++S + +  +   ++ EEC    V +  DT+  +FVVV    +   
Sbjct: 5   QAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDIFWGS 64

Query: 67  AHNGVDLLVTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFIN 126
            H G+D  VT+                P G  ++ ++G + +KFEF + + G Y FCF N
Sbjct: 65  DHPGLDFTVTS----------------PAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHN 124

Query: 127 NSPHQETIEFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQ 186
                ET+ F IH+ H      ++    KDEHL P+  +I +L E L  +  EQ++L+A+
Sbjct: 125 PYSTPETVSFYIHVGHI----PNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKAR 184

Query: 187 TERQAKVNDAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKV 231
             R    N++     I   V E   L  AS LQV  +R+LF K V
Sbjct: 185 DTRHRHTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLFSKSV 209

[Close]
BLAST of Cp4.1LG08g08380 vs. TrEMBL
Match: M5WCT6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011405mg PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-56
Identity = 119/218 (54.59%), Postives = 153/218 (70.18%), Query Frame = 1 

Query: 14  IFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLL 73
           + +    +S   V GIRFVID+EECFSHNV++  DT+++SFVV+ V    H+  +GVDL+
Sbjct: 11  VLLLTFLVSLQAVFGIRFVIDREECFSHNVQYEGDTVHISFVVIKVDASWHYTQDGVDLV 70

Query: 74  VTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETI 133
           V                KGP GE+I + R KTSEKF+F++  KG + FCF N SP+ ETI
Sbjct: 71  V----------------KGPSGEQIHDFRDKTSEKFDFVTRHKGVHQFCFTNKSPYHETI 130

Query: 134 EFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVN 193
           +FDIH++H+  +YD   QH KDEH +PLL Q+ KL E L  I+FEQ WLEAQTERQA VN
Sbjct: 131 DFDIHVSHF-TYYD---QHAKDEHFNPLLEQVSKLEEALYNIQFEQHWLEAQTERQAIVN 190

Query: 194 DAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           +AMS  AI KA  ESAAL+GAS+LQV+LLRRLFE+K+G
Sbjct: 191 EAMSRRAIHKAFFESAALVGASALQVYLLRRLFERKLG 208

[Close]
BLAST of Cp4.1LG08g08380 vs. TrEMBL
Match: A0A059BQB8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02040 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.9e-55
Identity = 122/218 (55.96%), Postives = 152/218 (69.72%), Query Frame = 1 

Query: 14  IFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLL 73
           + M ALF+S   V GIRFVID+EECFSHNVE+  DT+++SFVV+   +  H++ +GVDLL
Sbjct: 11  VTMLALFLSLQAVSGIRFVIDREECFSHNVEYEGDTVHISFVVIKSDSSWHYSQDGVDLL 70

Query: 74  VTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETI 133
           V                KGP G++I + R K SEKFEFI+  KG + FCF N SP+ ET+
Sbjct: 71  V----------------KGPSGDQIHDFRDKISEKFEFIAHHKGVHRFCFTNKSPYHETV 130

Query: 134 EFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVN 193
           +FD+H+ H+   Y D  +H KDEH +PL+ QI KL E L  I+FEQ WLEAQTERQA VN
Sbjct: 131 DFDLHVGHF--TYHD--EHAKDEHFNPLMEQIGKLEEALYNIQFEQHWLEAQTERQAIVN 190

Query: 194 DAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           D MS  AI KA  ESAALIGAS LQV+LLRRLFE+K+G
Sbjct: 191 DLMSRRAIHKAFFESAALIGASVLQVYLLRRLFERKLG 208

[Close]
BLAST of Cp4.1LG08g08380 vs. TrEMBL
Match: W9QQH7_9ROSA (Transmembrane emp24 domain-containing protein OS=Morus notabilis GN=L484_018207 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.9e-55
Identity = 119/218 (54.59%), Postives = 153/218 (70.18%), Query Frame = 1 

Query: 14  IFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLL 73
           + + +  +S   V GIRFVID+EECFSH+V++  DT+ +SFVVV V +  H++  GVDL+
Sbjct: 91  VILLSFLLSLRAVFGIRFVIDREECFSHDVKYEGDTVLVSFVVVKVDSSWHYSEEGVDLV 150

Query: 74  VTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETI 133
           V                KGP G++I + R KTSEKFEF++ RKG + FCF N SP  ETI
Sbjct: 151 V----------------KGPTGDQIHDFRDKTSEKFEFVAHRKGVHRFCFTNKSPSHETI 210

Query: 134 EFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVN 193
           +FD+H++H+  +YD+   H KDEHL+PL  QI KL E L  I+FEQ WLEAQTERQA VN
Sbjct: 211 DFDVHVSHF-SYYDE---HAKDEHLNPLYEQISKLEEVLYNIQFEQHWLEAQTERQALVN 270

Query: 194 DAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           +AMS  A+ KA  ESAALIGAS LQV+LLRRLFE+K+G
Sbjct: 271 EAMSKRAVQKAFFESAALIGASVLQVYLLRRLFERKLG 288

[Close]
BLAST of Cp4.1LG08g08380 vs. TrEMBL
Match: U5DCT2_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00061p00199890 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.0e-55
Identity = 118/227 (51.98%), Postives = 154/227 (67.84%), Query Frame = 1 

Query: 6   GKSKYRFFIFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHH 65
           G S++   + +  +  S  P LGIRFVID+EECFSH+V++  DT+++SFVV+      H+
Sbjct: 20  GLSRWVHALTLCLVLSSLQPTLGIRFVIDREECFSHSVQYEGDTVHVSFVVIKTENAWHY 79

Query: 66  AHNGVDLLVTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFIN 125
             +GVDL+V                KGP G++I + R KTSEKFEF++  KG + FCF N
Sbjct: 80  GDDGVDLVV----------------KGPSGDQIHDARDKTSEKFEFVAHHKGLHRFCFTN 139

Query: 126 NSPHQETIEFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQ 185
            SP+ ETI+FDIH+ H+  F    EQH KDEH +PLL QI KL E L  ++FEQ WLEAQ
Sbjct: 140 KSPYHETIDFDIHVGHFAYF----EQHAKDEHFNPLLEQIAKLEEALYNVQFEQHWLEAQ 199

Query: 186 TERQAKVNDAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVGS 233
           TERQA VN+ MS  AI KA+ ESAAL+G S LQV+LLRRLFE+K+G+
Sbjct: 200 TERQALVNEGMSRRAIHKALFESAALVGVSVLQVYLLRRLFERKLGT 226

[Close]
BLAST of Cp4.1LG08g08380 vs. TrEMBL
Match: B9S9V9_RICCO (Coated vesicle membrane protein, putative OS=Ricinus communis GN=RCOM_0522630 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.0e-55
Identity = 120/231 (51.95%), Postives = 160/231 (69.26%), Query Frame = 1 

Query: 1   MEMGSGKSKYRFFIFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVH 60
           + MG G  +   F+ +A L +S+   LGIRFVID+EECFSH+V++  DT+++SFVVV   
Sbjct: 725 LAMGIGMKELFSFVLLA-LLLSAREALGIRFVIDREECFSHDVKYEGDTVHVSFVVVKTD 784

Query: 61  TWRHHAHNGVDLLVTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYH 120
           +  H+  +GVDL+                +KGP G++I + R K S+K+EF++ +KG +H
Sbjct: 785 SSWHYTEDGVDLV----------------IKGPSGDQIHDFRDKVSDKYEFMARQKGVHH 844

Query: 121 FCFINNSPHQETIEFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQ 180
           FCF N SP+ ETI+FD+H+ H + +YD   +H KDEH  PLL QI KL E L  I+FEQ 
Sbjct: 845 FCFTNKSPYHETIDFDVHVGH-FSYYD---EHAKDEHFKPLLDQIWKLEEALYNIQFEQH 904

Query: 181 WLEAQTERQAKVNDAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           WLEAQTERQA VN+AMS  A+ KA  ESAALIGAS LQV+LLRRLFE+K+G
Sbjct: 905 WLEAQTERQAIVNEAMSRRAVHKAFYESAALIGASVLQVYLLRRLFERKLG 934

[Close]
BLAST of Cp4.1LG08g08380 vs. TAIR10
Match: AT3G07680.1 (AT3G07680.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 198.4 bits (503), Expect = 5.2e-51
Identity = 109/218 (50.00%), Postives = 142/218 (65.14%), Query Frame = 1 

Query: 14  IFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLL 73
           I +  L  S    LGIRFVID+EECFSH  E+  DT+++SFVV+   +  H   +GVDL+
Sbjct: 7   IVLLGLLWSFQATLGIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLV 66

Query: 74  VTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETI 133
           +                 GP GE+I + R + S K +F+  +KG Y FCF N SP+ ETI
Sbjct: 67  I----------------HGPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETI 126

Query: 134 EFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVN 193
           +FD+ + H+  +YD   QH KDEH +PL+ QI KL E L  I+FEQ WLEAQT+RQA VN
Sbjct: 127 DFDVQLGHF-AYYD---QHAKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVN 186

Query: 194 DAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           + MS  A+ KA+ ES ALIGAS LQV+LLRRLFE+K+G
Sbjct: 187 ENMSKRAVHKALFESFALIGASFLQVYLLRRLFERKLG 204

[Close]
BLAST of Cp4.1LG08g08380 vs. TAIR10
Match: AT3G22845.1 (AT3G22845.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-21
Identity = 67/225 (29.78%), Postives = 109/225 (48.44%), Query Frame = 1 

Query: 7   KSKYRFFIFMAALFISS-HPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHH 66
           ++K   F+ +  + ++S + +  +   ++ EEC    V +  DT+  +FVVV    +   
Sbjct: 5   QAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDIFWGS 64

Query: 67  AHNGVDLLVTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFIN 126
            H G+D  VT+                P G  ++ ++G + +KFEF + + G Y FCF N
Sbjct: 65  DHPGLDFTVTS----------------PAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHN 124

Query: 127 NSPHQETIEFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQ 186
                ET+ F IH+ H      ++    KDEHL P+  +I +L E L  +  EQ++L+A+
Sbjct: 125 PYSTPETVSFYIHVGHI----PNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKAR 184

Query: 187 TERQAKVNDAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKV 231
             R    N++     I   V E   L  AS LQV  +R+LF K V
Sbjct: 185 DTRHRHTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLFSKSV 209

[Close]
BLAST of Cp4.1LG08g08380 vs. NCBI nr
Match: gi|645216123|ref|XP_008219687.1| (PREDICTED: transmembrane emp24 domain-containing protein p24beta2-like [Prunus mume])

HSP 1 Score: 226.9 bits (577), Expect = 3.8e-56
Identity = 119/218 (54.59%), Postives = 153/218 (70.18%), Query Frame = 1 

Query: 14  IFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLL 73
           + +    +S   V GIRFVID+EECFSHNV++  DT+++SFVV+ V    H+  +GVDL+
Sbjct: 11  VLLLTFLVSLQAVFGIRFVIDREECFSHNVQYEGDTVHISFVVIKVDASWHYTQDGVDLV 70

Query: 74  VTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETI 133
           V                KGP GE+I + R KTSEKF+F++  KG + FCF N SP+ ETI
Sbjct: 71  V----------------KGPSGEQIHDFRDKTSEKFDFVTRHKGVHQFCFTNKSPYHETI 130

Query: 134 EFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVN 193
           +FDIH++H+  +YD   QH KDEH +PLL Q+ KL E L  I+FEQ WLEAQTERQA VN
Sbjct: 131 DFDIHVSHF-TYYD---QHAKDEHFNPLLEQVSKLEEALYNIQFEQHWLEAQTERQAIVN 190

Query: 194 DAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           +AMS  AI KA  ESAAL+GAS+LQV+LLRRLFE+K+G
Sbjct: 191 EAMSRRAIHKAFFESAALVGASALQVYLLRRLFERKLG 208

[Close]
BLAST of Cp4.1LG08g08380 vs. NCBI nr
Match: gi|595829581|ref|XP_007205899.1| (hypothetical protein PRUPE_ppa011405mg [Prunus persica])

HSP 1 Score: 226.9 bits (577), Expect = 3.8e-56
Identity = 119/218 (54.59%), Postives = 153/218 (70.18%), Query Frame = 1 

Query: 14  IFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLL 73
           + +    +S   V GIRFVID+EECFSHNV++  DT+++SFVV+ V    H+  +GVDL+
Sbjct: 11  VLLLTFLVSLQAVFGIRFVIDREECFSHNVQYEGDTVHISFVVIKVDASWHYTQDGVDLV 70

Query: 74  VTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETI 133
           V                KGP GE+I + R KTSEKF+F++  KG + FCF N SP+ ETI
Sbjct: 71  V----------------KGPSGEQIHDFRDKTSEKFDFVTRHKGVHQFCFTNKSPYHETI 130

Query: 134 EFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVN 193
           +FDIH++H+  +YD   QH KDEH +PLL Q+ KL E L  I+FEQ WLEAQTERQA VN
Sbjct: 131 DFDIHVSHF-TYYD---QHAKDEHFNPLLEQVSKLEEALYNIQFEQHWLEAQTERQAIVN 190

Query: 194 DAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           +AMS  AI KA  ESAAL+GAS+LQV+LLRRLFE+K+G
Sbjct: 191 EAMSRRAIHKAFFESAALVGASALQVYLLRRLFERKLG 208

[Close]
BLAST of Cp4.1LG08g08380 vs. NCBI nr
Match: gi|703069180|ref|XP_010088435.1| (Transmembrane emp24 domain-containing protein [Morus notabilis])

HSP 1 Score: 223.0 bits (567), Expect = 5.5e-55
Identity = 119/218 (54.59%), Postives = 153/218 (70.18%), Query Frame = 1 

Query: 14  IFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLL 73
           + + +  +S   V GIRFVID+EECFSH+V++  DT+ +SFVVV V +  H++  GVDL+
Sbjct: 91  VILLSFLLSLRAVFGIRFVIDREECFSHDVKYEGDTVLVSFVVVKVDSSWHYSEEGVDLV 150

Query: 74  VTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETI 133
           V                KGP G++I + R KTSEKFEF++ RKG + FCF N SP  ETI
Sbjct: 151 V----------------KGPTGDQIHDFRDKTSEKFEFVAHRKGVHRFCFTNKSPSHETI 210

Query: 134 EFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVN 193
           +FD+H++H+  +YD+   H KDEHL+PL  QI KL E L  I+FEQ WLEAQTERQA VN
Sbjct: 211 DFDVHVSHF-SYYDE---HAKDEHLNPLYEQISKLEEVLYNIQFEQHWLEAQTERQALVN 270

Query: 194 DAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           +AMS  A+ KA  ESAALIGAS LQV+LLRRLFE+K+G
Sbjct: 271 EAMSKRAVQKAFFESAALIGASVLQVYLLRRLFERKLG 288

[Close]
BLAST of Cp4.1LG08g08380 vs. NCBI nr
Match: gi|702369951|ref|XP_010061440.1| (PREDICTED: transmembrane emp24 domain-containing protein p24beta2-like [Eucalyptus grandis])

HSP 1 Score: 223.0 bits (567), Expect = 5.5e-55
Identity = 122/218 (55.96%), Postives = 152/218 (69.72%), Query Frame = 1 

Query: 14  IFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVHTWRHHAHNGVDLL 73
           + M ALF+S   V GIRFVID+EECFSHNVE+  DT+++SFVV+   +  H++ +GVDLL
Sbjct: 11  VTMLALFLSLQAVSGIRFVIDREECFSHNVEYEGDTVHISFVVIKSDSSWHYSQDGVDLL 70

Query: 74  VTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYHFCFINNSPHQETI 133
           V                KGP G++I + R K SEKFEFI+  KG + FCF N SP+ ET+
Sbjct: 71  V----------------KGPSGDQIHDFRDKISEKFEFIAHHKGVHRFCFTNKSPYHETV 130

Query: 134 EFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQWLEAQTERQAKVN 193
           +FD+H+ H+   Y D  +H KDEH +PL+ QI KL E L  I+FEQ WLEAQTERQA VN
Sbjct: 131 DFDLHVGHF--TYHD--EHAKDEHFNPLMEQIGKLEEALYNIQFEQHWLEAQTERQAIVN 190

Query: 194 DAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           D MS  AI KA  ESAALIGAS LQV+LLRRLFE+K+G
Sbjct: 191 DLMSRRAIHKAFFESAALIGASVLQVYLLRRLFERKLG 208

[Close]
BLAST of Cp4.1LG08g08380 vs. NCBI nr
Match: gi|223538016|gb|EEF39629.1| (coated vesicle membrane protein, putative [Ricinus communis])

HSP 1 Score: 222.6 bits (566), Expect = 7.2e-55
Identity = 120/231 (51.95%), Postives = 160/231 (69.26%), Query Frame = 1 

Query: 1   MEMGSGKSKYRFFIFMAALFISSHPVLGIRFVIDKEECFSHNVEFIRDTIYLSFVVVSVH 60
           + MG G  +   F+ +A L +S+   LGIRFVID+EECFSH+V++  DT+++SFVVV   
Sbjct: 725 LAMGIGMKELFSFVLLA-LLLSAREALGIRFVIDREECFSHDVKYEGDTVHVSFVVVKTD 784

Query: 61  TWRHHAHNGVDLLVTTFINYSSFFFSLRFVKGPLGERIEEIRGKTSEKFEFISLRKGRYH 120
           +  H+  +GVDL+                +KGP G++I + R K S+K+EF++ +KG +H
Sbjct: 785 SSWHYTEDGVDLV----------------IKGPSGDQIHDFRDKVSDKYEFMARQKGVHH 844

Query: 121 FCFINNSPHQETIEFDIHINHYYEFYDDDEQHVKDEHLSPLLAQIKKLGETLGVIEFEQQ 180
           FCF N SP+ ETI+FD+H+ H + +YD   +H KDEH  PLL QI KL E L  I+FEQ 
Sbjct: 845 FCFTNKSPYHETIDFDVHVGH-FSYYD---EHAKDEHFKPLLDQIWKLEEALYNIQFEQH 904

Query: 181 WLEAQTERQAKVNDAMSTMAILKAVLESAALIGASSLQVFLLRRLFEKKVG 232
           WLEAQTERQA VN+AMS  A+ KA  ESAALIGAS LQV+LLRRLFE+K+G
Sbjct: 905 WLEAQTERQAIVNEAMSRRAVHKAFYESAALIGASVLQVYLLRRLFERKLG 934

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g08380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
P24B2_ARATH9.2e-5050.00Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana G... [more]
P24B3_ARATH3.4e-2029.78Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana G... [more]
BLAST of Cp4.1LG08g08380 vs. TrEMBL
Match NameE-valueIdentityDescription
M5WCT6_PRUPE2.7e-5654.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011405mg PE=3 SV=1[more]
A0A059BQB8_EUCGR3.9e-5555.96Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02040 PE=3 SV=1[more]
W9QQH7_9ROSA3.9e-5554.59Transmembrane emp24 domain-containing protein OS=Morus notabilis GN=L484_018207 ... [more]
U5DCT2_AMBTC5.0e-5551.98Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00061p00199890 PE=3 SV=... [more]
B9S9V9_RICCO5.0e-5551.95Coated vesicle membrane protein, putative OS=Ricinus communis GN=RCOM_0522630 PE... [more]
BLAST of Cp4.1LG08g08380 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07680.15.2e-5150.00 emp24/gp25L/p24 family/GOLD family protein[more]
AT3G22845.11.9e-2129.78 emp24/gp25L/p24 family/GOLD family protein[more]
BLAST of Cp4.1LG08g08380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|645216123|ref|XP_008219687.1|3.8e-5654.59PREDICTED: transmembrane emp24 domain-containing protein p24beta2-like [Prunus m... [more]
gi|595829581|ref|XP_007205899.1|3.8e-5654.59hypothetical protein PRUPE_ppa011405mg [Prunus persica][more]
gi|703069180|ref|XP_010088435.1|5.5e-5554.59Transmembrane emp24 domain-containing protein [Morus notabilis][more]
gi|702369951|ref|XP_010061440.1|5.5e-5555.96PREDICTED: transmembrane emp24 domain-containing protein p24beta2-like [Eucalypt... [more]
gi|223538016|gb|EEF39629.1|7.2e-5551.95coated vesicle membrane protein, putative [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR015720TMP21-related
IPR009038GOLD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006810 transport
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0012505 endomembrane system
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g08380.1Cp4.1LG08g08380.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 35..227
score: 8.3
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 28..227
score: 4.8
IPR009038GOLD domainPROFILEPS50866GOLDcoord: 36..139
score: 1
IPR015720TMP21-relatedPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 11..73
score: 3.1E-90coord: 90..236
score: 3.1
NoneNo IPR availablePANTHERPTHR22811:SF50TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24BETA2coord: 11..73
score: 3.1E-90coord: 90..236
score: 3.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g08380CmaCh06G006710Cucurbita maxima (Rimu)cmacpeB852
Cp4.1LG08g08380Carg23546Silver-seed gourdcarcpeB0011
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g08380Wax gourdcpewgoB1074
Cp4.1LG08g08380Wax gourdcpewgoB1094
Cp4.1LG08g08380Cucurbita pepo (Zucchini)cpecpeB251
Cp4.1LG08g08380Cucumber (Gy14) v1cgycpeB0028
Cp4.1LG08g08380Cucumber (Gy14) v1cgycpeB0029
Cp4.1LG08g08380Cucurbita maxima (Rimu)cmacpeB365
Cp4.1LG08g08380Cucurbita moschata (Rifu)cmocpeB329
Cp4.1LG08g08380Cucurbita moschata (Rifu)cmocpeB797
Cp4.1LG08g08380Wild cucumber (PI 183967)cpecpiB852
Cp4.1LG08g08380Wild cucumber (PI 183967)cpecpiB870
Cp4.1LG08g08380Cucumber (Chinese Long) v2cpecuB850
Cp4.1LG08g08380Cucumber (Chinese Long) v2cpecuB868
Cp4.1LG08g08380Bottle gourd (USVL1VR-Ls)cpelsiB717
Cp4.1LG08g08380Bottle gourd (USVL1VR-Ls)cpelsiB720
Cp4.1LG08g08380Watermelon (Charleston Gray)cpewcgB766
Cp4.1LG08g08380Watermelon (Charleston Gray)cpewcgB778
Cp4.1LG08g08380Watermelon (97103) v1cpewmB828
Cp4.1LG08g08380Watermelon (97103) v1cpewmB834
Cp4.1LG08g08380Melon (DHL92) v3.5.1cpemeB811
Cp4.1LG08g08380Melon (DHL92) v3.5.1cpemeB814
Cp4.1LG08g08380Cucumber (Gy14) v2cgybcpeB445
Cp4.1LG08g08380Cucumber (Gy14) v2cgybcpeB461
Cp4.1LG08g08380Melon (DHL92) v3.6.1cpemedB948
Cp4.1LG08g08380Melon (DHL92) v3.6.1cpemedB954
Cp4.1LG08g08380Silver-seed gourdcarcpeB0834
Cp4.1LG08g08380Cucumber (Chinese Long) v3cpecucB1047
Cp4.1LG08g08380Cucumber (Chinese Long) v3cpecucB1064