Cp4.1LG08g06990 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTTAATGCTCATCTTTCACTTTACAGTGGGGGGATTTTTGTTCTCTTTCATACACATTCTGTGAGTTGTTGGGATTTGGATATCGTTTGGTGGGATTATTAATAGGCACTTTAGTTTATATGACCATTTTATTGTTCCTTTCACTCTGTTCTATTGTAATATCCTAGTCTCTGAGAATTGAAACAAGTAATTTTCAGAAAACTTACTAATGCAGATCATTTAGTTGTTTTTTTTTTTTTTACTTTTTTGTGAAGTTGATTTGCTCGTGGTGTGCTTATGTTGGGATCTATCTAGTATTGTAGTGAAGTCAAGGTGCTGCGTTGGGATTGCTTTGTAGTACACCGATCTTCGTCTTCAGTAAATGGGCTGCATTTTTTCTAAAGAAAACAAACAATTTCCAGGATATGAAGATCCTATAAGTCTTGCCTCACAAACAGCTTGTAAGTTGTGCTTTGTTTATGTTTTCTGAGTTCTGAGTTTCTAGATTTAATGACTAACTTTTGGACTATTTTATTGAATCTATGCTCTCCTGATGCTTTCTAGCTATCGAGATATGTTCATGTCGGTCTGAGTTTCTCTCATATATTATTCATGATTCTTCTTGTTCTTTATACTTGCTTCAACAGTTAGTGTCAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATCAGCAGTTCTATCATAGATGATGGTTTAATAAACAGGGTATTTGTTTCTGATATGACTTATCATTCCGGTGTTCGTGTTATCATCCCTCTCTTCATGTCTGTGCAAGAACTATTTGAACTCACATTGTTTTGGTTAAATAATGTGTACATGTATAGCAGTGAGGATAATGCCATTGATTTTGCTGGTTTAGTTGGATTAGTCAAACGTATGTGTTCTATGCAACAGTGATTTGAAGATGTTCTCTATAACGATCTTGTTCTATATGCAGGAAGAATTTCAGCTGGCCATTTTTAATAACAGAAAGAAGGAAAATCTGTTAGCAAATCGGGTAAATATATAAGCTTTTATCTTAAATTCCTTACCAAAAGCGTTAGCTTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAAGGTGTAGAAACCTCTCCCTAGCATACACGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAACTCGAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGTTGTTACAAATGGTATCAAAGCCAGACACCGAGCGATGTGCCAGCGAGGAGGCTGAGCCCCGAAGGGGGGTGGGTTGTGAGATCCCACATCGATTGGGGAGGAGAAGGAATCATTATTTGTAAGGGTGTGGAAACCTTTCCCTCGTAGATGTGTTTTAAAAACCTTGAGGGGGAAGCCCGAAAGGGAAAGCTTAAAGAGGATAATATTTACTAGCGGTGGGTTTGGTTTGTTACAGAGCGAGTCATGGGTTTTGACATTGCAATTCATTTTTAGTAATATTTTGGCAATGAATCTAACTTCTTCTGTTATTAATGACTCATGGTTCCATTTGATGGCTATATTTTCTCATAGCATATTTTAAGGTTGGATCCATTTTGTATGCAGCTCTTTGATCTATTTGATGTTCAGCAGCAAGGGTTCATTGATTTTGGTGACTTTGTAAGATCATTGAGTGTCTTTCATCCTAATGCTCCCGAGGAAGACAAGATTGAATGTAAGTATGCAGGATATGGCATAATATATACCTCACATGAATCATTCTATCTTGTGGCTTGACTGATGCTTGTTATTTATTTACCTTACAGTTTCGTTTAAGCTTTACGATTTGGATAACACGGGATTCATTGAGCGGCAAGAGGTAGGTTCTCTATGCCTCTGGTTGAATACGATCCATACGATGCATGGATTATTAGATACGTTCAAGGATGAGAAAAAGTTTTAAATGTGTCTCCATTATCTTTATTTTGATTCTGTCGAAACCCTGCCCAAAAATTTACATGCTACACGGTAGTGGATGATATGGCACGCCATCGAAATCGGTAGATAAGCAACCGGGATGCTATGAATGGAAGATCTGTGCCTGTTTTTGTGGAAGAATTTTCATGGTTAACTCCACCAGAGCTTTTTGTTTGTTGACTTTGGTAGGTGAAGCAGATGCTAATTGCCCTTCTTTCTGAATCTGAGATGAAGCTGGCTGATGAGACAATAGAGATAATCCTTGATAAGGTCAGGTACCATAAAATTTCAGGATCATTAGTTGTTTGAGTTTCCTGTAGTTTTCAGCAGATCATACTCTTCTATCAGTTATTGTTGAAAACCATTTTATTACCCAAAGAGTATGACCACGAGTATTGGTATTTTTTATGAGATCCCACATCGGTTGGAGAGGAGAACAAAGCATTCTTTACAAGGGTGTGGAAACCTCTCCCTAGCCATTTTAAAACCTTAAGTGGAAGCCGGAAAGGAAAAACCCAAAGAGGACAATATCTACTAGCGCTGGGTTTGGGCTGTTACAAATGGTATCAGAGTCAGGCACTGAGCAGTGTGCCAATGAGAATGGTGAGCCCTAAAGGGGGTGTCCACCAAGTGGTGTGCCAGTAAAGACGCTGAGCCTTGAAGGAGGGTGGATTGTGAGATCCCACATCAGTTGAAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCCAGCAGACGTGTTTTAAAACCTTGAGAGGAAGGCCGAAAGGAAAAGTCCATAAAGGGAAATATCTGCTAACGGCGGGCTTGGACTGTTACATTTTTTTCCGGAATATGTAGCTACAATTTACAAAAATAAGCAAACTGGAAAGGACCCAATATCTGAATCATCATTTAGAAAGAAAGGAAGAAAGAAATATTCGGTTTGGCCCATGTCGAAGTTCCATTCAAGCACTCGATACTAAATTTCGTACGGTGTCGCTGTCAGCTTTTTATCTGATGGAATATTTTGTACAGACATTCATGGAGGCTGATGTGAAGGAAGATGGGAAGATAGACAAGAGTGAATGGCAAAATTTTGTGTGCAAGAATCCATCATTATTGAAAGTGATGACGCTTCCATACTTGAGGTAAAGAAGAAAAGGCATAATATAAGCATAATACATGTTTGGTTAGGTTTCAAATTGTTGATCCTTTTGTGTTTGTGGGGGACAGGGACATAACAACCACCTTCCCAAGTTTTGTGTTTAATTCTGAGGTGGATGACATTGCCTCGTAACAGAGGGAGCTAAGAAGCTGTTGCTGTTGCTGTTGTTGTTTTCTTTGAATGGAAGAAAACAGAACTGAGTTTTCTGATTCAACCCAATTATGAGACATTTTCCCTTTCCTTCCCCCACACATGATCAATAAGTTTTAGTGTAATTTCAGCAATGTTTGTTGCTCTCTTACACTCTGTTGAATAAGTTTAGGAAAATATATCGAGCGTTATGAGCGTTATAAGTCTTGTTTCGACTGAGCGTTGTCGAGTTAAAAGAAGACACCCTTATACTGATTCGTATGGAAAAGAAATGATGAGGTTGGTGAGAGGGGTAGGTGTGTGTTCGTATGAGAGAGGAACAATGGCGATACGATGAGGGTTTTTCTTTATTTCTTTTATTTTTTTTAAGGGCATGATGTCATCTTTTGAAGAGGTAATGTTGTCTTGTTGTAAACGATGTTGTCTCTTTAAGAGATGCA AGTTTAATGCTCATCTTTCACTTTACAGTGGGGGGATTTTTGTTCTCTTTCATACACATTCTGTGAGTTGTTGGGATTTGGATATCGTTTGGTGGGATTATTAATAGGCACTTTAGTTTATATGACCATTTTATTGTTCCTTTCACTCTGTTCTATTGTAATATCCTAGTCTCTGAGAATTGAAACAAGTAATTTTCAGAAAACTTACTAATGCAGATCATTTAGTTGTTTTTTTTTTTTTTACTTTTTTGTGAAGTTGATTTGCTCGTGGTGTGCTTATGTTGGGATCTATCTAGTATTGTAGTGAAGTCAAGGTGCTGCGTTGGGATTGCTTTGTAGTACACCGATCTTCGTCTTCAGTAAATGGGCTGCATTTTTTCTAAAGAAAACAAACAATTTCCAGGATATGAAGATCCTATAAGTCTTGCCTCACAAACAGCTTTTAGTGTCAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATCAGCAGTTCTATCATAGATGATGGTTTAATAAACAGGCTCTTTGATCTATTTGATGTTCAGCAGCAAGGGTTCATTGATTTTGGTGACTTTGTAAGATCATTGAGTGTCTTTCATCCTAATGCTCCCGAGGAAGACAAGATTGAATTTTCGTTTAAGCTTTACGATTTGGATAACACGGGATTCATTGAGCGGCAAGAGGTGAAGCAGATGCTAATTGCCCTTCTTTCTGAATCTGAGATGAAGCTGGCTGATGAGACAATAGAGATAATCCTTGATAAGACATTCATGGAGGCTGATGTGAAGGAAGATGGGAAGATAGACAAGAGTGAATGGCAAAATTTTGTGTGCAAGAATCCATCATTATTGAAAGTGATGACGCTTCCATACTTGAGGGACATAACAACCACCTTCCCAAGTTTTGTGTTTAATTCTGAGGTGGATGACATTGCCTCGTAACAGAGGGAGCTAAGAAGCTGTTGCTGTTGCTGTTGTTGTTTTCTTTGAATGGAAGAAAACAGAACTGAGTTTTCTGATTCAACCCAATTATGAGACATTTTCCCTTTCCTTCCCCCACACATGATCAATAAGTTTTAGTGTAATTTCAGCAATGTTTGTTGCTCTCTTACACTCTGTTGAATAAGTTTAGGAAAATATATCGAGCGTTATGAGCGTTATAAGTCTTGTTTCGACTGAGCGTTGTCGAGTTAAAAGAAGACACCCTTATACTGATTCGTATGGAAAAGAAATGATGAGGTTGGTGAGAGGGGTAGGTGTGTGTTCGTATGAGAGAGGAACAATGGCGATACGATGAGGGTTTTTCTTTATTTCTTTTATTTTTTTTAAGGGCATGATGTCATCTTTTGAAGAGGTAATGTTGTCTTGTTGTAAACGATGTTGTCTCTTTAAGAGATGCA ATGGGCTGCATTTTTTCTAAAGAAAACAAACAATTTCCAGGATATGAAGATCCTATAAGTCTTGCCTCACAAACAGCTTTTAGTGTCAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATCAGCAGTTCTATCATAGATGATGGTTTAATAAACAGGCTCTTTGATCTATTTGATGTTCAGCAGCAAGGGTTCATTGATTTTGGTGACTTTGTAAGATCATTGAGTGTCTTTCATCCTAATGCTCCCGAGGAAGACAAGATTGAATTTTCGTTTAAGCTTTACGATTTGGATAACACGGGATTCATTGAGCGGCAAGAGGTGAAGCAGATGCTAATTGCCCTTCTTTCTGAATCTGAGATGAAGCTGGCTGATGAGACAATAGAGATAATCCTTGATAAGACATTCATGGAGGCTGATGTGAAGGAAGATGGGAAGATAGACAAGAGTGAATGGCAAAATTTTGTGTGCAAGAATCCATCATTATTGAAAGTGATGACGCTTCCATACTTGAGGGACATAACAACCACCTTCCCAAGTTTTGTGTTTAATTCTGAGGTGGATGACATTGCCTCGTAA MGCIFSKENKQFPGYEDPISLASQTAFSVSEVEALFELYKSISSSIIDDGLINRLFDLFDVQQQGFIDFGDFVRSLSVFHPNAPEEDKIEFSFKLYDLDNTGFIERQEVKQMLIALLSESEMKLADETIEIILDKTFMEADVKEDGKIDKSEWQNFVCKNPSLLKVMTLPYLRDITTTFPSFVFNSEVDDIAS
BLAST of Cp4.1LG08g06990 vs. Swiss-Prot
Match: CNBL1_ARATH (Calcineurin B-like protein 1 OS=Arabidopsis thaliana GN=CBL1 PE=1 SV=3) HSP 1 Score: 296.6 bits (758), Expect = 2.0e-79 Identity = 152/213 (71.36%), Postives = 177/213 (83.10%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. Swiss-Prot
Match: CNBL1_ORYSJ (Calcineurin B-like protein 1 OS=Oryza sativa subsp. japonica GN=CBL1 PE=2 SV=2) HSP 1 Score: 291.6 bits (745), Expect = 6.4e-78 Identity = 145/213 (68.08%), Postives = 173/213 (81.22%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. Swiss-Prot
Match: CNBL9_ARATH (Calcineurin B-like protein 9 OS=Arabidopsis thaliana GN=CBL9 PE=1 SV=3) HSP 1 Score: 290.0 bits (741), Expect = 1.9e-77 Identity = 147/213 (69.01%), Postives = 175/213 (82.16%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. Swiss-Prot
Match: CNBL3_ORYSJ (Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica GN=CBL3 PE=1 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 1.9e-61 Identity = 124/201 (61.69%), Postives = 149/201 (74.13%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. Swiss-Prot
Match: CNBL6_ORYSJ (Calcineurin B-like protein 6 OS=Oryza sativa subsp. japonica GN=CBL6 PE=2 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 7.1e-61 Identity = 119/197 (60.41%), Postives = 148/197 (75.13%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TrEMBL
Match: A0A0A0L221_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017070 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 3.6e-88 Identity = 174/213 (81.69%), Postives = 185/213 (86.85%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TrEMBL
Match: C4P7Y8_VITVI (Calcineurin B-like protein 01 OS=Vitis vinifera GN=CBL01 PE=2 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.4e-84 Identity = 164/213 (77.00%), Postives = 183/213 (85.92%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TrEMBL
Match: A4ZKI2_POPTR (Calcineurin B-like protein 1 OS=Populus trichocarpa GN=CBL1 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 3.2e-84 Identity = 161/213 (75.59%), Postives = 182/213 (85.45%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TrEMBL
Match: A1XCM9_POPEU (Calcineurin B-like protein OS=Populus euphratica GN=CBL1 PE=2 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.2e-84 Identity = 162/213 (76.06%), Postives = 182/213 (85.45%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TrEMBL
Match: V4TU19_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022219mg PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 9.3e-84 Identity = 163/213 (76.53%), Postives = 181/213 (84.98%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TAIR10
Match: AT4G17615.1 (AT4G17615.1 calcineurin B-like protein 1) HSP 1 Score: 296.6 bits (758), Expect = 1.1e-80 Identity = 152/213 (71.36%), Postives = 177/213 (83.10%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TAIR10
Match: AT5G47100.1 (AT5G47100.1 calcineurin B-like protein 9) HSP 1 Score: 290.0 bits (741), Expect = 1.0e-78 Identity = 147/213 (69.01%), Postives = 175/213 (82.16%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TAIR10
Match: AT5G55990.1 (AT5G55990.1 calcineurin B-like protein 2) HSP 1 Score: 230.3 bits (586), Expect = 9.8e-61 Identity = 122/210 (58.10%), Postives = 147/210 (70.00%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TAIR10
Match: AT5G24270.1 (AT5G24270.1 Calcium-binding EF-hand family protein) HSP 1 Score: 229.2 bits (583), Expect = 2.2e-60 Identity = 118/215 (54.88%), Postives = 158/215 (73.49%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. TAIR10
Match: AT4G26570.2 (AT4G26570.2 calcineurin B-like 3) HSP 1 Score: 228.8 bits (582), Expect = 2.9e-60 Identity = 120/205 (58.54%), Postives = 147/205 (71.71%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. NCBI nr
Match: gi|449459016|ref|XP_004147242.1| (PREDICTED: calcineurin B-like protein 1 [Cucumis sativus]) HSP 1 Score: 332.4 bits (851), Expect = 5.2e-88 Identity = 174/213 (81.69%), Postives = 185/213 (86.85%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. NCBI nr
Match: gi|743864698|ref|XP_011031991.1| (PREDICTED: calcineurin B-like protein 1 isoform X2 [Populus euphratica]) HSP 1 Score: 326.6 bits (836), Expect = 2.9e-86 Identity = 159/193 (82.38%), Postives = 182/193 (94.30%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. NCBI nr
Match: gi|526117956|ref|NP_001267901.1| (calcineurin B-like protein 01 [Vitis vinifera]) HSP 1 Score: 320.5 bits (820), Expect = 2.1e-84 Identity = 164/213 (77.00%), Postives = 183/213 (85.92%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. NCBI nr
Match: gi|1009169438|ref|XP_015865662.1| (PREDICTED: calcineurin B-like protein 1 [Ziziphus jujuba]) HSP 1 Score: 319.7 bits (818), Expect = 3.5e-84 Identity = 163/213 (76.53%), Postives = 184/213 (86.38%), Query Frame = 1
BLAST of Cp4.1LG08g06990 vs. NCBI nr
Match: gi|133925815|gb|ABO43660.1| (calcineurin B-like protein 1 [Populus trichocarpa]) HSP 1 Score: 319.3 bits (817), Expect = 4.6e-84 Identity = 161/213 (75.59%), Postives = 182/213 (85.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|