Carg12056 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTGCATTTTTTCTAAAGAAAACAGACAATTTCCAGGATATGAAGATCCTATAAATCTTGCTTCACAAACAGCTTGTAAGTAGTGCTTTGTTTATGTTTTCTGAGTTCTGAGTTTCTAGATTTAATGACTAACTTTTGGACTATTTCTATTGAATCTATGCTCTCCCGATGCTTTCTAGCTATCGAGATACGTTCATGTCGGTCTGAATTTCTCTCATATATTATTCATGATTCTTCTTGTTCTTTATACTTGCTTCAACAGTTAGTGTCAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATCAGCAGTTCTATCATAGATGATGGTTTAATAAACAGGGTATTTGTTTCTGATATGACTTATCATTCCGGTGTTCGTGTTATCATCCCTCTCTTCATGTCTGTGCAAGAACTATTTGAACTCACATTGTTTTGGTTAAATAATGTGTACATGTATAGCAGTGAGGATAATGCCATTGATTTTGCTGGTTTAGTTGGATTAGTCAAACGTATGTGTTCTATGCAACAGTGATTTGAAGATGTTCTCTATAACGATCTCGTTCTATATGCAGGAAGAATTTCAGCTGGCCATTTTTAATAACAGAAAGAAGGAAAATCTGTTAGCAAATCGGGTAAATATATAAGCTTTTATCTTAAATTCCTTACCAAAAGTGTTAGCGTGTAAGATCCCATATCAGTTGGAGAGGAGAACGAAGCATTCTTTATAAAGGTGTGGAAACCTCTCCCTAGCATACACGTTATAAAAACCTTTAGGGGAAGCCCGAAAGGGAAAACTCGAAGAGGATAATATCTGCTAGCGGTGGGCTTAGGTTGTTACAAATGGTATCAAAACCAAACACCGAGCGATGTGCCAGCGAGGAGGCTGAGCCCCGAAGGGGGGTGGGTTGTGAGATCCCACATCGATTGGGGAGGAGAAGGAATAATTATTTGTAAGGGTGTGGAAACCTTTCCCTAGTAGATGTGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGATAATATTTACTAGCGGTGGGCTTGGGTTGTTACAAAGCGAGTCATCGATTTTGACATTGCAATTCATTTTTAGTAATATTTTGGCAATGAATCTAACTTCTTCTGTTATTAATGACTCATGGTTCCATTTGATGGCTATATTTTCTCATAGCATATTTTAAGGTTGGATCCATTTTGTATGCAGCTCTTTGATCTATTTGATGTTCAGCAGCAAGGGTTTATTGATTTTGGTGACTTTGTAAGATCATTGAGTGTCTTTCATCCTAATGCTCCCGAGGAAGACAAGATTGAATGTAAGTATGCAGGATATGGCATAATATATACCTCACATGTATCATTCTATCTTGTGGCTTGACTGATGCTAGTTATTTATTTACCTTACAGTTTCGTTTAAGCTTTACGATTTGGATAACACGGGATTCATTGAGCGGCAAGAGGTAGGTTCTCTATGCCTCTGGTTGAATACGATCCATACGATGCATGGATTATTAGATACGTTCAAGGATGAGAAAAAGTTTTAAATTTATCTTTATTTTGATTCTGTCGAAACCCTGCCCAAACATTTACATGCTACACGGTAGTGGATGATATGGCACGCCATCGAAATCGGTAGATAAGCAACCGGGATGCTATGAATGGAAGATCTGTGCCTGTTTTTGTGAAAGATTTACATGGTTAACTCCACCAGAGCTTTTTGTTTGTTAACTTTGGCAGGTGAAGCAGATGCTAATTGCCCTTCTTTCTGAATCTGAGATGAAGCTGGCTGATGAGACAATAGAGATAATCCTTGATAAGGTCAGGTACCATAAAATTTCAGGATCATTAGTTGTTTGAGTTTCCTGTAGTTTTCAGCAAATCATACTCTTCTATCAGTTATTGTTAAAACTATTTTATTACCAAATAGTATGACCACGAGTATTGGTATTTTTTATGAGATCCCACGTCGGTTGTTGAGGAGAACAAAGCATTCTTTACAAGGGTGTGGAAACCTCTCCCTAGCCATTTTAAAACCTTAAGTGGAAGCCTGAAAGGGAAAACCCAGAGAGGACAATATCTACTAGCGTTGGGTTTGGACTGTTACAAATGGTATCAGAGCCAGGCACTGGGCAATGTACCAATGAGGATGGCGAGCCCTAAAGGGGGTGCACACGAGATGGTGTGCCAGCAAAGACGCTGAGCCCTGAAGGAGGGTGGATTATGAGATCTCACATCAGTTGAAGAGGGAAACGAAGCATTCTTTATAAGGGTATGGAAATCTGTCTCTAGCAGATGTATTTTAAAACCTTGAGGGGAAGGCCGAAGGGAAAAATCCATAAAGGAAAATATCTGCTAATGGTGGGCTTGGACTGTTACATTTTTTCTTCAGAATACGTAGCTACAATTTACAAAAATAAGCAAACTAGAAAGGACCCAATATCCGAATCATCATTTAGAAAGAAAGAAAGAAAGAAAGAAATATTCGGTTTGGCCCATGTCGAAGTGTTCCATCCAAGAACTCGATACTAAATTTCGTACCGTGTCGCTGTCAGCTTTTTATCTGATGGAATATTTTGTACAGACATTCATGGAGGCTGATGTGAAGGAAGATGGGAAGATAGACAAGAGTGAATGGCAAAATTTTGTGTGCAAGAATCCATCATTATTGAAAGTGATGACGCTTCCATACTTGAGGTAAAGAAGAAAAAGCATAATATATGTTTGGTTAGGCTTTCAAATTGTTGATCCTTTTGTTGTTTGTGGGGGACAGGGACATAACAACCACCTTCCCAAGTTTTGTGTTTAATTCTGAGGTGGATGAGATTGCCTCATAACAGAGGAAGCTAAGAAGCTGTTGTTGTCGTCGTCGTTGAATACAACGTCGTCGTTGTTTTCTTTGAATGGTAGAAAACAGAACTGAGTTTACTGATTCAACCCAATTATGAGACATTTTCCCTTTCCTTCCCCACACATAATAAATAAGTTCTAGTGTAATTTCAGCAATGTTTGTTGCTCTCTTACACTCTCTTGAATTCTGTAAATCTTTCTTTTAGGAAAATATATCAAGTGTTATAAGTCTTTAATTGG ATGGGCTGCATTTTTTCTAAAGAAAACAGACAATTTCCAGGATATGAAGATCCTATAAATCTTGCTTCACAAACAGCTTTTAGTGTCAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATCAGCAGTTCTATCATAGATGATGGTTTAATAAACAGGGAAGAATTTCAGCTGGCCATTTTTAATAACAGAAAGAAGGAAAATCTGTTAGCAAATCGGCTCTTTGATCTATTTGATGTTCAGCAGCAAGGGTTTATTGATTTTGGTGACTTTGTAAGATCATTGAGTGTCTTTCATCCTAATGCTCCCGAGGAAGACAAGATTGAATTTTCGTTTAAGCTTTACGATTTGGATAACACGGGATTCATTGAGCGGCAAGAGGTGAAGCAGATGCTAATTGCCCTTCTTTCTGAATCTGAGATGAAGCTGGCTGATGAGACAATAGAGATAATCCTTGATAAGACATTCATGGAGGCTGATGTGAAGGAAGATGGGAAGATAGACAAGAGTGAATGGCAAAATTTTGTGTGCAAGAATCCATCATTATTGAAAGTGATGACGCTTCCATACTTGAGGGACATAACAACCACCTTCCCAAGTTTTGTGTTTAATTCTGAGGTGGATGAGATTGCCTCATAACAGAGGAAGCTAAGAAGCTGTTGTTGTCGTCGTCGTTGAATACAACGTCGTCGTTGTTTTCTTTGAATGGTAGAAAACAGAACTGAGTTTACTGATTCAACCCAATTATGAGACATTTTCCCTTTCCTTCCCCACACATAATAAATAAGTTCTAGTGTAATTTCAGCAATGTTTGTTGCTCTCTTACACTCTCTTGAATTCTGTAAATCTTTCTTTTAGGAAAATATATCAAGTGTTATAAGTCTTTAATTGG ATGGGCTGCATTTTTTCTAAAGAAAACAGACAATTTCCAGGATATGAAGATCCTATAAATCTTGCTTCACAAACAGCTTTTAGTGTCAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATCAGCAGTTCTATCATAGATGATGGTTTAATAAACAGGGAAGAATTTCAGCTGGCCATTTTTAATAACAGAAAGAAGGAAAATCTGTTAGCAAATCGGCTCTTTGATCTATTTGATGTTCAGCAGCAAGGGTTTATTGATTTTGGTGACTTTGTAAGATCATTGAGTGTCTTTCATCCTAATGCTCCCGAGGAAGACAAGATTGAATTTTCGTTTAAGCTTTACGATTTGGATAACACGGGATTCATTGAGCGGCAAGAGGTGAAGCAGATGCTAATTGCCCTTCTTTCTGAATCTGAGATGAAGCTGGCTGATGAGACAATAGAGATAATCCTTGATAAGACATTCATGGAGGCTGATGTGAAGGAAGATGGGAAGATAGACAAGAGTGAATGGCAAAATTTTGTGTGCAAGAATCCATCATTATTGAAAGTGATGACGCTTCCATACTTGAGGGACATAACAACCACCTTCCCAAGTTTTGTGTTTAATTCTGAGGTGGATGAGATTGCCTCATAA MGCIFSKENRQFPGYEDPINLASQTAFSVSEVEALFELYKSISSSIIDDGLINREEFQLAIFNNRKKENLLANRLFDLFDVQQQGFIDFGDFVRSLSVFHPNAPEEDKIEFSFKLYDLDNTGFIERQEVKQMLIALLSESEMKLADETIEIILDKTFMEADVKEDGKIDKSEWQNFVCKNPSLLKVMTLPYLRDITTTFPSFVFNSEVDEIAS
BLAST of Carg12056 vs. NCBI nr
Match: XP_022935593.1 (calcineurin B-like protein 1 [Cucurbita moschata] >XP_022935601.1 calcineurin B-like protein 1 [Cucurbita moschata] >XP_022935611.1 calcineurin B-like protein 1 [Cucurbita moschata]) HSP 1 Score: 418.3 bits (1074), Expect = 1.6e-113 Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg12056 vs. NCBI nr
Match: XP_023539775.1 (calcineurin B-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023539776.1 calcineurin B-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-112 Identity = 210/213 (98.59%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg12056 vs. NCBI nr
Match: XP_023005541.1 (calcineurin B-like protein 1 isoform X1 [Cucurbita maxima] >XP_023005542.1 calcineurin B-like protein 1 isoform X1 [Cucurbita maxima] >XP_023005543.1 calcineurin B-like protein 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 414.8 bits (1065), Expect = 1.7e-112 Identity = 211/213 (99.06%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of Carg12056 vs. NCBI nr
Match: XP_022155549.1 (calcineurin B-like protein 1 [Momordica charantia] >XP_022155550.1 calcineurin B-like protein 1 [Momordica charantia] >XP_022155551.1 calcineurin B-like protein 1 [Momordica charantia]) HSP 1 Score: 382.5 bits (981), Expect = 9.4e-103 Identity = 194/213 (91.08%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Carg12056 vs. NCBI nr
Match: XP_004147242.1 (PREDICTED: calcineurin B-like protein 1 [Cucumis sativus] >XP_008448767.1 PREDICTED: calcineurin B-like protein 1 [Cucumis melo] >XP_008448768.1 PREDICTED: calcineurin B-like protein 1 [Cucumis melo] >XP_008448769.1 PREDICTED: calcineurin B-like protein 1 [Cucumis melo] >KGN55813.1 hypothetical protein Csa_3G017070 [Cucumis sativus]) HSP 1 Score: 380.9 bits (977), Expect = 2.7e-102 Identity = 193/213 (90.61%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Carg12056 vs. TAIR10
Match: AT4G17615.1 (calcineurin B-like protein 1) HSP 1 Score: 338.2 bits (866), Expect = 3.7e-93 Identity = 165/213 (77.46%), Postives = 195/213 (91.55%), Query Frame = 0
BLAST of Carg12056 vs. TAIR10
Match: AT5G47100.1 (calcineurin B-like protein 9) HSP 1 Score: 337.8 bits (865), Expect = 4.8e-93 Identity = 165/213 (77.46%), Postives = 193/213 (90.61%), Query Frame = 0
BLAST of Carg12056 vs. TAIR10
Match: AT5G24270.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 267.3 bits (682), Expect = 8.0e-72 Identity = 130/215 (60.47%), Postives = 174/215 (80.93%), Query Frame = 0
BLAST of Carg12056 vs. TAIR10
Match: AT5G55990.1 (calcineurin B-like protein 2) HSP 1 Score: 264.6 bits (675), Expect = 5.2e-71 Identity = 132/210 (62.86%), Postives = 163/210 (77.62%), Query Frame = 0
BLAST of Carg12056 vs. TAIR10
Match: AT4G26570.2 (calcineurin B-like 3) HSP 1 Score: 259.6 bits (662), Expect = 1.7e-69 Identity = 131/205 (63.90%), Postives = 163/205 (79.51%), Query Frame = 0
BLAST of Carg12056 vs. Swiss-Prot
Match: sp|O81445|CNBL1_ARATH (Calcineurin B-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=CBL1 PE=1 SV=3) HSP 1 Score: 338.2 bits (866), Expect = 6.7e-92 Identity = 165/213 (77.46%), Postives = 195/213 (91.55%), Query Frame = 0
BLAST of Carg12056 vs. Swiss-Prot
Match: sp|Q9LTB8|CNBL9_ARATH (Calcineurin B-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CBL9 PE=1 SV=3) HSP 1 Score: 337.8 bits (865), Expect = 8.7e-92 Identity = 165/213 (77.46%), Postives = 193/213 (90.61%), Query Frame = 0
BLAST of Carg12056 vs. Swiss-Prot
Match: sp|Q7XC27|CNBL1_ORYSJ (Calcineurin B-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL1 PE=2 SV=2) HSP 1 Score: 334.3 bits (856), Expect = 9.6e-91 Identity = 159/213 (74.65%), Postives = 191/213 (89.67%), Query Frame = 0
BLAST of Carg12056 vs. Swiss-Prot
Match: sp|Q75LU8|CNBL3_ORYSJ (Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL3 PE=1 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.3e-71 Identity = 134/201 (66.67%), Postives = 165/201 (82.09%), Query Frame = 0
BLAST of Carg12056 vs. Swiss-Prot
Match: sp|Q3HRP1|CNBL6_ORYSJ (Calcineurin B-like protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL6 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.2e-71 Identity = 130/208 (62.50%), Postives = 167/208 (80.29%), Query Frame = 0
BLAST of Carg12056 vs. TrEMBL
Match: tr|A0A1S3BJV7|A0A1S3BJV7_CUCME (calcineurin B-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103490833 PE=4 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 1.8e-102 Identity = 193/213 (90.61%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Carg12056 vs. TrEMBL
Match: tr|A0A0A0L221|A0A0A0L221_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017070 PE=4 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 1.8e-102 Identity = 193/213 (90.61%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Carg12056 vs. TrEMBL
Match: tr|A0A218XU14|A0A218XU14_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr003732 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 7.6e-101 Identity = 184/213 (86.38%), Postives = 202/213 (94.84%), Query Frame = 0
BLAST of Carg12056 vs. TrEMBL
Match: tr|A0A2P5AKE3|A0A2P5AKE3_PARAD (Parvalbumin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323560 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 8.4e-100 Identity = 184/213 (86.38%), Postives = 200/213 (93.90%), Query Frame = 0
BLAST of Carg12056 vs. TrEMBL
Match: tr|A0A2P5BYT0|A0A2P5BYT0_9ROSA (Parvalbumin OS=Trema orientalis OX=63057 GN=TorRG33x02_303920 PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 2.5e-99 Identity = 183/213 (85.92%), Postives = 200/213 (93.90%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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