Cp4.1LG08g06880 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g06880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	50S ribosomal L25
Location	Cp4.1LG08 : 5222606 .. 5225589 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTAATTAGCATTTTTTTTAAAAAAAATGAAATTTAAACCGAAATGGAAAAGGCCTGTTAGCCCACAGCCCATATTGTGAAAAAAAAGCCGGAAAGAAGGGAGTACATCTTAACCCGCAGGTTCAGTCGACAACTCCAGCCGCCTCACCTCAAACTCTCGCTCTTATTTCACTCCAACGGCGACGGCACCAGCAGCCTGCGGCGAAGTCTCTGTCTCTGTCTCTGCAACCTCTACGGCCGTCTCGACGGAACTCACCTTCTACGAATTGACCTAAATCGGTACAATACCCCTTCAGATTTCTCCACTAAAACCCTCCCTTAAGCCCTTCCGTTCATCCTTCTCCGCCCAATGCTACGCTTCTACCACTCCCCTACTCTCTCAAGAGTCCTCCTCCTCCGGAGGTTTTCCTCCGCTGCCACCGCCACCGCTCCACCCCTTGATTCCGATCCCGAACCTTCATTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCGAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGAAAGAACATTTCCGCTAAAGAGCGCAAGGTTGGCCGCGTTCCAAGCATCGTGTTCGAGCAAGAGGACGGTCAGCATGGCGGAAATAAGCGTCTCATATCTGTACGGACTAATCAAATTAGGAAGCTTGTAAATCATCTAGGTCGCTCTTTCTTCCTCTCCAGGCTTTTTGATCTCGAAGTTCGGTCCGAGTTCGAATCCGGGGATATTGTTGAGAAGGTTCGGGTCTTACCTCGGAAGGTACTCTATTATCTTGTCTGTAAGGACTAAATTTCGCTTAGGAACTTTCATGAAATTTCNCCTACCTCGGAAGGTACTCTATTATCTCGTCCTGTAAGGACTAAATTTCGCTTAGGAACTTTCATGAAATTTCCAACTTATTGAGTTTATGAGATGATTTATGAGGAGGATTAGAATAATTGATTGTTTCATGGTCGTAAAGGAGCTGAAAGCATTGTGCACACTGTAGTTTCAATGATCATTATATTTCATGTATATGTTTTGATTAATCAGAAGATAAGAAGATGGGTTTAGTTCAATTTTGATCATAAGTTAGTGTAAGATCTTGTGAGAATACATATAATATAATACCCATTCTGAACTTGCCCCATTCATGTTTGTTCAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACACGCTTTATTAAAAGTTGATGTACCTCTTGTTTTCCGAGGGGAAGATGTATGCCCTGGATTGAGGAAAGGTACTGCTGCAAGACTAAGTTCCTTTTATTTGATTTTCTTTAAAGTCTATAAATGTTATGCAGTAATTTATAAGATTTGAAGATATAATAGCTTTTTGTTCGGGTGGGATTTTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACACCCTTTATAAGAGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGAGAAGCCTAAAGAGAACAATATTTGCTTGTGGTGGGCTTGGGTTGTTATAAATGGTATTATAGCCAGACACCGGGAGATGTGCGAGCGAGAAGGTTGAGCTCCCCGAAGGGGGTGGACACGGGGCGGTGTGCCAGCAAGAACGCTGAATCCCGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGTAGGGCATTTTTGTTTGTACTCCTTTTCTCATTACAAAAAATTCAGAAAAGGAAGTACTTGCATCTTGTTTCTGCATTCGTACTTTCTGAAAAGTTTCTGGTTTTCTTAAAAATGTTCTGGCATTCCTACGAAAAAATTGCGGGCGTCGATCCTGATTATGTTATCTTCAAAGGAGAGAACAATTATATTCTTACTCCTTTAGTGAACATTTTTCTAATGTTTGAAAAATTCTACAGGATCTTATTTGAATACAATTAAGAGGACAGTTAAATACCTTTGCCCTGCTGATATTGTTCCTCCATATATCGATGTCGATCTTAGCGAGTTAGATGTTGGGCAAAAGTTGGTTACGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTCTTCGGTCAAAGGACGAGCCTGTTTGTAAGATTGCAGGAGCCCGAGCTTCCGATCAACAAAAGAAATCAAAGTAACTCTGGACTATCAATATCTTAGTTGCTTGGACATTAAAGCTTCTTCTGTTAAAGAAGACGATGTTTGTAAGATTATGGGATCCAGGATTTCATGATCAGTCAAGAAATCTTAATAAATCCCTCCAGATTTTGGTCACCATCGGTTTTAATTTTTTTCTCCCAATACTTCAGAAAGCAATGTACGTTGTTTGTTGTTGGTTCACTAGCATTTATTTGATCTCTCTGTTCACGGAATGCTTGAACTCTGATGAGCAAGAATATTATGATAACTTTTTAGAGGGAGTTTTTAGCTTAATTGGAGGAGGCATTTGTAACATATTATACATTATCTCCTTGAAATTGGTTTCCCGTTGCATTGGATAATGTTATTCAAGGGGCAAATGTTATTGGTTCCTAAA

mRNA sequence

TATTTAATTAGCATTTTTTTTAAAAAAAATGAAATTTAAACCGAAATGGAAAAGGCCTGTTAGCCCACAGCCCATATTGTGAAAAAAAAGCCGGAAAGAAGGGAGTACATCTTAACCCGCAGGTTCAGTCGACAACTCCAGCCGCCTCACCTCAAACTCTCGCTCTTATTTCACTCCAACGGCGACGGCACCAGCAGCCTGCGGCGAAGTCTCTGTCTCTGTCTCTGCAACCTCTACGGCCGTCTCGACGGAACTCACCTTCTACGAATTGACCTAAATCGGTACAATACCCCTTCAGATTTCTCCACTAAAACCCTCCCTTAAGCCCTTCCGTTCATCCTTCTCCGCCCAATGCTACGCTTCTACCACTCCCCTACTCTCTCAAGAGTCCTCCTCCTCCGGAGGTTTTCCTCCGCTGCCACCGCCACCGCTCCACCCCTTGATTCCGATCCCGAACCTTCATTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCGAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGAAAGAACATTTCCGCTAAAGAGCGCAAGGTTGGCCGCGTTCCAAGCATCGTGTTCGAGCAAGAGGACGGTCAGCATGGCGGAAATAAGCGTCTCATATCTGTACGGACTAATCAAATTAGGAAGCTTGTAAATCATCTAGGTCGCTCTTTCTTCCTCTCCAGGCTTTTTGATCTCGAAGTTCGGTCCGAGTTCGAATCCGGGGATATTGTTGAGAAGGTTCGGGTCTTACCTCGGAAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACACGCTTTATTAAAAGTTGATGTACCTCTTGTTTTCCGAGGGGAAGATGTATGCCCTGGATTGAGGAAAGGATCTTATTTGAATACAATTAAGAGGACAGTTAAATACCTTTGCCCTGCTGATATTGTTCCTCCATATATCGATGTCGATCTTAGCGAGTTAGATGTTGGGCAAAAGTTGGTTACGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTCTTCGGTCAAAGGACGAGCCTGTTTGTAAGATTGCAGGAGCCCGAGCTTCCGATCAACAAAAGAAATCAAAGTAACTCTGGACTATCAATATCTTAGTTGCTTGGACATTAAAGCTTCTTCTGTTAAAGAAGACGATGTTTGTAAGATTATGGGATCCAGGATTTCATGATCAGTCAAGAAATCTTAATAAATCCCTCCAGATTTTGGTCACCATCGGTTTTAATTTTTTTCTCCCAATACTTCAGAAAGCAATGTACGTTGTTTGTTGTTGGTTCACTAGCATTTATTTGATCTCTCTGTTCACGGAATGCTTGAACTCTGATGAGCAAGAATATTATGATAACTTTTTAGAGGGAGTTTTTAGCTTAATTGGAGGAGGCATTTGTAACATATTATACATTATCTCCTTGAAATTGGTTTCCCGTTGCATTGGATAATGTTATTCAAGGGGCAAATGTTATTGGTTCCTAAA

Coding sequence (CDS)

ATGCTACGCTTCTACCACTCCCCTACTCTCTCAAGAGTCCTCCTCCTCCGGAGGTTTTCCTCCGCTGCCACCGCCACCGCTCCACCCCTTGATTCCGATCCCGAACCTTCATTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCGAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGAAAGAACATTTCCGCTAAAGAGCGCAAGGTTGGCCGCGTTCCAAGCATCGTGTTCGAGCAAGAGGACGGTCAGCATGGCGGAAATAAGCGTCTCATATCTGTACGGACTAATCAAATTAGGAAGCTTGTAAATCATCTAGGTCGCTCTTTCTTCCTCTCCAGGCTTTTTGATCTCGAAGTTCGGTCCGAGTTCGAATCCGGGGATATTGTTGAGAAGGTTCGGGTCTTACCTCGGAAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACACGCTTTATTAAAAGTTGATGTACCTCTTGTTTTCCGAGGGGAAGATGTATGCCCTGGATTGAGGAAAGGATCTTATTTGAATACAATTAAGAGGACAGTTAAATACCTTTGCCCTGCTGATATTGTTCCTCCATATATCGATGTCGATCTTAGCGAGTTAGATGTTGGGCAAAAGTTGGTTACGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTCTTCGGTCAAAGGACGAGCCTGTTTGTAAGATTGCAGGAGCCCGAGCTTCCGATCAACAAAAGAAATCAAAGTAA

Protein sequence

MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDEPVCKIAGARASDQQKKSK

Homology

[Close]

BLAST of Cp4.1LG08g06880 vs. Swiss-Prot
Match: RL25_RHOPB (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplY PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-20
Identity = 58/186 (31.18%), Postives = 97/186 (52.15%), Query Frame = 1


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHL-GRSFF 116
           A  R   GK  +  ER+ GRVP +++       G NK  +++  +        L GR  F
Sbjct: 9   ATARPAGGKGAARAERRAGRVPGVIY-------GDNKPPVTISVDDTELRARILAGR--F 68

Query: 117 LSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVF 176
           L+ +FD+E+  +        K RV+PR  HL    D P++V F+R    AL++V VPL  
Sbjct: 69  LTTIFDVELDGQ--------KHRVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLHL 128

Query: 177 RGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALK 236
           +  +  PG+++G  +N +  TV+    A+ +P +I+ D+S+LD+G  L   D+ +   +K
Sbjct: 129 KNAEGAPGVKRGGTVNIVTHTVELEAEAESIPQFIEADVSQLDIGSSLHLSDVVLPKGVK 177

Query: 237 LLRSKD 242
            L  +D
Sbjct: 189 TLSRED 177

[Close]

BLAST of Cp4.1LG08g06880 vs. Swiss-Prot
Match: RL25_RHOP2 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplY PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 61/187 (32.62%), Postives = 96/187 (51.34%), Query Frame = 1


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRL--ISVRTNQIRKLVNHLGRSF 116
           A  R  SGK  +  ER+ GRVP +++       G NK    ISV    +R  +   GR  
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNKPPLPISVEDKDLRLRIQ-AGR-- 68

Query: 117 FLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLV 176
           FL+ +FD+ +  +        K RV+PR  HL    D P++V F+R    A +++ VPL 
Sbjct: 69  FLTTIFDVVLDGQ--------KHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLH 128

Query: 177 FRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPAL 236
            +G +  PG+++G   N +  TV    PAD +P +I+ D+S LD+G  L   D+ +   +
Sbjct: 129 LKGLESAPGVKRGGTFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGV 177

Query: 237 KLLRSKD 242
           K +  +D
Sbjct: 189 KSVSRED 177

[Close]

BLAST of Cp4.1LG08g06880 vs. Swiss-Prot
Match: RL25_NITWN (50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplY PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 60/188 (31.91%), Postives = 99/188 (52.66%), Query Frame = 1


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRL---ISVRTNQIRKLVNHLGRS 116
           A  R  SGK  +  ER+ GRVP++++        GNK+    ISV   ++R+ +   GR 
Sbjct: 9   ATARPKSGKGAARAERRAGRVPAVIY--------GNKQPPQPISVEEPELRQRIL-AGR- 68

Query: 117 FFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL 176
            FL+ +FD+ +  +        K RV+PR  HL    D P++V F+R    A ++V VPL
Sbjct: 69  -FLTTIFDINLDGK--------KHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPL 128

Query: 177 VFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPA 236
                DV PG+++G  +N +   +   C A+ +P +I+ D+  L++   L   DL++ P 
Sbjct: 129 RLLKADVAPGVKRGGTVNLVTHAIDVECAAESIPQFIEADVGALEISHSLHLSDLQLPPG 177

Query: 237 LKLLRSKD 242
           +K L  +D
Sbjct: 189 VKPLARED 177

[Close]

BLAST of Cp4.1LG08g06880 vs. Swiss-Prot
Match: RL25_RHOPT (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplY PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-19
Identity = 61/201 (30.35%), Postives = 102/201 (50.75%), Query Frame = 1


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFL 116
           A  R  SGK  +  ER+ GRVP +++         +   ISV   ++R  +   GR  FL
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIYGDNQ-----SPLPISVEEKELRLRIL-AGR--FL 68

Query: 117 SRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFR 176
           + +FD+ +  +        K RV+PR  HL    D P++V F+R  + A ++V VPL  +
Sbjct: 69  TTVFDVVLDGK--------KHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128

Query: 177 GEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKL 236
           G +V PG+++G   N +  TV+   PA+ +P +I+ D+S LD+G  L   D+ +   +K 
Sbjct: 129 GLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKS 188

Query: 237 LRSKDEPVCKIAGARASDQQK 258
           +   D  +  I      ++ K
Sbjct: 189 VSRDDVTLVTIVPPSGYNEDK 193

[Close]

BLAST of Cp4.1LG08g06880 vs. Swiss-Prot
Match: RL25_RHOPA (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=rplY PE=1 SV=3)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-19
Identity = 61/201 (30.35%), Postives = 102/201 (50.75%), Query Frame = 1


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFL 116
           A  R  SGK  +  ER+ GRVP +++         +   ISV   ++R  +   GR  FL
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIYGDNQ-----SPLPISVEEKELRLRIL-AGR--FL 68

Query: 117 SRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFR 176
           + +FD+ +  +        K RV+PR  HL    D P++V F+R  + A ++V VPL  +
Sbjct: 69  TTVFDVVLDGK--------KHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128

Query: 177 GEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKL 236
           G +V PG+++G   N +  TV+   PA+ +P +I+ D+S LD+G  L   D+ +   +K 
Sbjct: 129 GLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKS 188

Query: 237 LRSKDEPVCKIAGARASDQQK 258
           +   D  +  I      ++ K
Sbjct: 189 VSRDDVTLVTIVPPSGYNEDK 193

[Close]

BLAST of Cp4.1LG08g06880 vs. TrEMBL
Match: A0A0A0LFM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822380 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 9.1e-127
Identity = 234/260 (90.00%), Postives = 243/260 (93.46%), Query Frame = 1


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFY SPTLSRVLL R  ++ A ATAP  DS  EP FSYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYRSPTLSRVLLRRYSAATAPATAPAFDSVSEPLFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGK+ISAKERK GRVPSIVFEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSRLF
Sbjct: 61  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEV S+FESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHA+LKVDVPLVFRGEDV
Sbjct: 121 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKL++SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 261
           DEPVCKIAGAR SDQQKKSK
Sbjct: 241 DEPVCKIAGARVSDQQKKSK 260

[Close]

BLAST of Cp4.1LG08g06880 vs. TrEMBL
Match: A0A0D2RPU3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G184300 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 9.2e-111
Identity = 206/248 (83.06%), Postives = 222/248 (89.52%), Query Frame = 1


Query: 12  RVLLLRRFSSAATATAPPLDSDPEPS-FSYLEGFPKPDPKYAETILAIPRSISGKNISAK 71
           + L LR FS AA A    LD    PS  +YLEGFPKPDPKYAETILAIPRS SGKNISAK
Sbjct: 14  KTLHLRFFSQAALA----LDQSSSPSPLTYLEGFPKPDPKYAETILAIPRSTSGKNISAK 73

Query: 72  ERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFES 131
           ERKVGRVPSIVFEQEDGQHGGNKRLISV+TNQIRKLV HLG+SFFLSRLFDLEVRSEF +
Sbjct: 74  ERKVGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVKHLGQSFFLSRLFDLEVRSEFGT 133

Query: 132 GDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLRKGSYL 191
           GD++EKVRVLPR +HLHAGTDAPLNVTFIRAPS+ALLKVD+PLVFRGEDVCPG+RKG +L
Sbjct: 134 GDLIEKVRVLPRMLHLHAGTDAPLNVTFIRAPSNALLKVDIPLVFRGEDVCPGIRKGLFL 193

Query: 192 NTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDEPVCKIAGA 251
           NTIKRTVK+LCP DI+PPYIDVDLSELD GQKL+ GDLKVHPALK LRSKDEPVCKI GA
Sbjct: 194 NTIKRTVKFLCPPDIIPPYIDVDLSELDGGQKLLVGDLKVHPALKFLRSKDEPVCKIMGA 253

Query: 252 RASDQQKK 259
           R SDQQ+K
Sbjct: 254 RVSDQQRK 257

[Close]

BLAST of Cp4.1LG08g06880 vs. TrEMBL
Match: A0A0B0MKD0_GOSAR (50S ribosomal L25 OS=Gossypium arboreum GN=F383_18910 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 9.2e-111
Identity = 206/248 (83.06%), Postives = 222/248 (89.52%), Query Frame = 1


Query: 12  RVLLLRRFSSAATATAPPLDSDPEPS-FSYLEGFPKPDPKYAETILAIPRSISGKNISAK 71
           + L LR FS AA A    LD    PS  +YLEGFPKPDPKYAETILAIPRS SGKNISAK
Sbjct: 14  KTLHLRFFSQAALA----LDQSSSPSPLTYLEGFPKPDPKYAETILAIPRSTSGKNISAK 73

Query: 72  ERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFES 131
           ERKVGRVPSIVFEQEDGQHGGNKRLISV+TNQIRKLV HLG+SFFLSRLFDLEVRSEF +
Sbjct: 74  ERKVGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVKHLGQSFFLSRLFDLEVRSEFGT 133

Query: 132 GDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLRKGSYL 191
           GD++EKVRVLPR +HLHAGTDAPLNVTFIRAPS+ALLKVD+PLVFRGEDVCPG+RKG +L
Sbjct: 134 GDLIEKVRVLPRMLHLHAGTDAPLNVTFIRAPSNALLKVDIPLVFRGEDVCPGIRKGLFL 193

Query: 192 NTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDEPVCKIAGA 251
           NTIKRTVK+LCP DI+PPYIDVDLSELD GQKL+ GDLKVHPALK LRSKDEPVCKI GA
Sbjct: 194 NTIKRTVKFLCPPDIIPPYIDVDLSELDGGQKLLVGDLKVHPALKFLRSKDEPVCKIMGA 253

Query: 252 RASDQQKK 259
           R SDQQ+K
Sbjct: 254 RVSDQQRK 257

[Close]

BLAST of Cp4.1LG08g06880 vs. TrEMBL
Match: D7SPM3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g00850 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.2e-110
Identity = 206/257 (80.16%), Postives = 223/257 (86.77%), Query Frame = 1


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           ML   H   L+  L LR FS +A A       +P P  +YLEGFP+PDPK+AE I AIPR
Sbjct: 1   MLIHRHRQILTNALHLRHFSQSAAAAVLQDPLEPPP-LTYLEGFPRPDPKFAEIIRAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           +ISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  TISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEV  +FES +++EKVRVLPRK+HLHAGTDA LNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVGPDFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
            PGL+KG+YLNTIKRTVKYLCPADI+PPYIDVDLSELD GQK+V GDLKVHPALKLLRSK
Sbjct: 181 SPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSK 240

Query: 241 DEPVCKIAGARASDQQK 258
           DEPVCKI G R SDQ+K
Sbjct: 241 DEPVCKIMGTRVSDQRK 256

[Close]

BLAST of Cp4.1LG08g06880 vs. TrEMBL
Match: D7TV83_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00620 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.6e-110
Identity = 205/257 (79.77%), Postives = 222/257 (86.38%), Query Frame = 1


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           ML   H   L+  L LR FS +A A       +P P  +YLEGFP+PDPK+AE I AIPR
Sbjct: 1   MLIHRHRQILTNALHLRHFSQSAAAAVLQDPLEPPP-LTYLEGFPRPDPKFAEIIRAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           +ISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISV+TNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  TISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEV   FES +++EKVRVLPRK+HLHAGTDA LNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVGPHFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
            PGL+KG+YLNTIKRTVKYLCPADI+PPYIDVDLSELD GQK+V GDLKVHPALKLLRSK
Sbjct: 181 SPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSK 240

Query: 241 DEPVCKIAGARASDQQK 258
           DEPVCKI G R SDQ+K
Sbjct: 241 DEPVCKIMGTRVSDQRK 256

[Close]

BLAST of Cp4.1LG08g06880 vs. TAIR10
Match: AT4G23620.2 (AT4G23620.2 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain)

HSP 1 Score: 368.2 bits (944), Expect = 4.1e-102
Identity = 186/257 (72.37%), Postives = 215/257 (83.66%), Query Frame = 1


Query: 16  LRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKVG 75
           LR FS AA A A  LD   E   +YL GFP+PDPK+AETILA+PRS+SGK+ISAKERK G
Sbjct: 16  LRLFSPAANA-ALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAG 75

Query: 76  RVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVE 135
           RVPSI+FEQEDGQHGGNKRLISV+TNQIRKLVNHLG SFFLSRLFD+EVR+E  S +++E
Sbjct: 76  RVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIE 135

Query: 136 KVRVLPR-------------KIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCP 195
           KVR LPR             KIHLH+GTDAPLNVTFIRAP  ALLKVD+PLVF G+DV P
Sbjct: 136 KVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSP 195

Query: 196 GLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDE 255
           GL+KG+ LNTIKRTVK+LCPA+I+PPYI+VDLS+LD+GQKLV GDLKVHPALKL++SKDE
Sbjct: 196 GLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDE 255

Query: 256 PVCKIAGARASDQQKKS 260
           P+ K+AG R +D QKKS
Sbjct: 256 PIVKVAGGRVTDTQKKS 271

[Close]

BLAST of Cp4.1LG08g06880 vs. TAIR10
Match: AT5G66860.1 (AT5G66860.1 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain)

HSP 1 Score: 166.0 bits (419), Expect = 3.1e-41
Identity = 90/203 (44.33%), Postives = 130/203 (64.04%), Query Frame = 1


Query: 53  ETILAIPRSISGKNISAKERKVGRVPSIVFEQE----DGQHGG--NKRLISVRTNQIRKL 112
           +TI AIPR  +G+ +SA++R +GR+P++VF Q     D    G   K+L++    QI+ +
Sbjct: 34  QTIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSI 93

Query: 113 VNHLGRSFFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAL 172
           ++ +G  FF S  F L++R+   S  +VE  RVLP K+H    T   LN+ F+ A     
Sbjct: 94  IDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEK 153

Query: 173 LKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTG 232
           LKVDVP+VF+G D CPGL+KG  L TI+ T+K L PA+ +P  I+VD+S LD+  K++  
Sbjct: 154 LKVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQ 213

Query: 233 DLKVHPALKLLRSKDE--PVCKI 248
           D+  HP+LKLL SK+E  PVCKI
Sbjct: 214 DVVFHPSLKLL-SKNETMPVCKI 235

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: gi|659085215|ref|XP_008443303.1| (PREDICTED: uncharacterized protein LOC103486925 [Cucumis melo])

HSP 1 Score: 464.5 bits (1194), Expect = 1.2e-127
Identity = 238/262 (90.84%), Postives = 246/262 (93.89%), Query Frame = 1


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATA--PPLDSDPEPSFSYLEGFPKPDPKYAETILAI 60
           MLRFYHSPTLSRVLL RRFSSAATA A  P LDS  EP FSYLEGFPKPDPKYAETILAI
Sbjct: 1   MLRFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAI 60

Query: 61  PRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR 120
           PRS SGK I AKERKVGRVPSI+FEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSR
Sbjct: 61  PRSTSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSR 120

Query: 121 LFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGE 180
           LFDLEV S+FESGDIVEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHA+LKVDVPLVFRGE
Sbjct: 121 LFDLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGE 180

Query: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLR 240
           DVCPGLRKGSYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKL++
Sbjct: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVK 240

Query: 241 SKDEPVCKIAGARASDQQKKSK 261
           SKDEPVCKIAGAR SDQQKKSK
Sbjct: 241 SKDEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: gi|449437765|ref|XP_004136661.1| (PREDICTED: uncharacterized protein LOC101205251 [Cucumis sativus])

HSP 1 Score: 461.1 bits (1185), Expect = 1.3e-126
Identity = 234/260 (90.00%), Postives = 243/260 (93.46%), Query Frame = 1


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFY SPTLSRVLL R  ++ A ATAP  DS  EP FSYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYRSPTLSRVLLRRYSAATAPATAPAFDSVSEPLFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGK+ISAKERK GRVPSIVFEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSRLF
Sbjct: 61  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEV S+FESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHA+LKVDVPLVFRGEDV
Sbjct: 121 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKL++SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 261
           DEPVCKIAGAR SDQQKKSK
Sbjct: 241 DEPVCKIAGARVSDQQKKSK 260

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: gi|720061089|ref|XP_010275063.1| (PREDICTED: uncharacterized protein LOC104610237 [Nelumbo nucifera])

HSP 1 Score: 410.6 bits (1054), Expect = 2.0e-111
Identity = 208/255 (81.57%), Postives = 228/255 (89.41%), Query Frame = 1


Query: 6   HSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGK 65
           H P LSR  +  RF S A A A  +  +PE   +YLE FPKPDPKYAETILAIPRS SGK
Sbjct: 4   HRPLLSRASIQLRFFSQAAAAA--ILHEPEVPLTYLEEFPKPDPKYAETILAIPRSTSGK 63

Query: 66  NISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVR 125
           NISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVR
Sbjct: 64  NISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVR 123

Query: 126 SEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLR 185
           SEF+S +I+EKVRVLPR++HLH+GTDA LNVTF+RAPS ALLK++VPLVFRGEDVCPGLR
Sbjct: 124 SEFDSDEIIEKVRVLPRRLHLHSGTDAVLNVTFLRAPSSALLKIEVPLVFRGEDVCPGLR 183

Query: 186 KGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDEPVC 245
           KG+YLNTI+RTV+YLCPADIVPPYIDVDLSELDVGQKLV GDLKVHPAL+L++SKDEPVC
Sbjct: 184 KGAYLNTIRRTVRYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALRLIQSKDEPVC 243

Query: 246 KIAGARASDQQKKSK 261
           KI GAR  +Q KKSK
Sbjct: 244 KIMGARV-EQPKKSK 255

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: gi|823144728|ref|XP_012472193.1| (PREDICTED: uncharacterized protein LOC105789373 [Gossypium raimondii])

HSP 1 Score: 407.9 bits (1047), Expect = 1.3e-110
Identity = 206/248 (83.06%), Postives = 222/248 (89.52%), Query Frame = 1


Query: 12  RVLLLRRFSSAATATAPPLDSDPEPS-FSYLEGFPKPDPKYAETILAIPRSISGKNISAK 71
           + L LR FS AA A    LD    PS  +YLEGFPKPDPKYAETILAIPRS SGKNISAK
Sbjct: 14  KTLHLRFFSQAALA----LDQSSSPSPLTYLEGFPKPDPKYAETILAIPRSTSGKNISAK 73

Query: 72  ERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFES 131
           ERKVGRVPSIVFEQEDGQHGGNKRLISV+TNQIRKLV HLG+SFFLSRLFDLEVRSEF +
Sbjct: 74  ERKVGRVPSIVFEQEDGQHGGNKRLISVQTNQIRKLVKHLGQSFFLSRLFDLEVRSEFGT 133

Query: 132 GDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLRKGSYL 191
           GD++EKVRVLPR +HLHAGTDAPLNVTFIRAPS+ALLKVD+PLVFRGEDVCPG+RKG +L
Sbjct: 134 GDLIEKVRVLPRMLHLHAGTDAPLNVTFIRAPSNALLKVDIPLVFRGEDVCPGIRKGLFL 193

Query: 192 NTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDEPVCKIAGA 251
           NTIKRTVK+LCP DI+PPYIDVDLSELD GQKL+ GDLKVHPALK LRSKDEPVCKI GA
Sbjct: 194 NTIKRTVKFLCPPDIIPPYIDVDLSELDGGQKLLVGDLKVHPALKFLRSKDEPVCKIMGA 253

Query: 252 RASDQQKK 259
           R SDQQ+K
Sbjct: 254 RVSDQQRK 257

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: gi|359476745|ref|XP_002276349.2| (PREDICTED: uncharacterized protein LOC100242725 [Vitis vinifera])

HSP 1 Score: 407.5 bits (1046), Expect = 1.7e-110
Identity = 206/257 (80.16%), Postives = 223/257 (86.77%), Query Frame = 1


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           ML   H   L+  L LR FS +A A       +P P  +YLEGFP+PDPK+AE I AIPR
Sbjct: 1   MLIHRHRQILTNALHLRHFSQSAAAAVLQDPLEPPP-LTYLEGFPRPDPKFAEIIRAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           +ISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  TISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEV  +FES +++EKVRVLPRK+HLHAGTDA LNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVGPDFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
            PGL+KG+YLNTIKRTVKYLCPADI+PPYIDVDLSELD GQK+V GDLKVHPALKLLRSK
Sbjct: 181 SPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSK 240

Query: 241 DEPVCKIAGARASDQQK 258
           DEPVCKI G R SDQ+K
Sbjct: 241 DEPVCKIMGTRVSDQRK 256

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g06880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL25_RHOPB	2.8e-20	31.18	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplY ...	[more]
RL25_RHOP2	1.1e-19	32.62	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplY PE...	[more]
RL25_NITWN	1.1e-19	31.91	50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 2539...	[more]
RL25_RHOPT	3.1e-19	30.35	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplY P...	[more]
RL25_RHOPA	3.1e-19	30.35	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CG...	[more]

BLAST of Cp4.1LG08g06880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFM4_CUCSA	9.1e-127	90.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G822380 PE=4 SV=1	[more]
A0A0D2RPU3_GOSRA	9.2e-111	83.06	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G184300 PE=4 SV=1	[more]
A0A0B0MKD0_GOSAR	9.2e-111	83.06	50S ribosomal L25 OS=Gossypium arboreum GN=F383_18910 PE=4 SV=1	[more]
D7SPM3_VITVI	1.2e-110	80.16	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g00850 PE=4 SV=...	[more]
D7TV83_VITVI	4.6e-110	79.77	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00620 PE=4 SV=...	[more]

BLAST of Cp4.1LG08g06880 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23620.2	4.1e-102	72.37	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT5G66860.1	3.1e-41	44.33	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]

BLAST of Cp4.1LG08g06880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085215\|ref\|XP_008443303.1\|	1.2e-127	90.84	PREDICTED: uncharacterized protein LOC103486925 [Cucumis melo]	[more]
gi\|449437765\|ref\|XP_004136661.1\|	1.3e-126	90.00	PREDICTED: uncharacterized protein LOC101205251 [Cucumis sativus]	[more]
gi\|720061089\|ref\|XP_010275063.1\|	2.0e-111	81.57	PREDICTED: uncharacterized protein LOC104610237 [Nelumbo nucifera]	[more]
gi\|823144728\|ref\|XP_012472193.1\|	1.3e-110	83.06	PREDICTED: uncharacterized protein LOC105789373 [Gossypium raimondii]	[more]
gi\|359476745\|ref\|XP_002276349.2\|	1.7e-110	80.16	PREDICTED: uncharacterized protein LOC100242725 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008097	5S rRNA binding
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR020057	Ribosomal_L25_b-dom
IPR020056	Rbsml_L25/Gln-tRNA_synth_N
IPR011035	Ribosomal_L25/Gln-tRNA_synth

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006418	tRNA aminoacylation for protein translation
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g06880.1	Cp4.1LG08g06880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	unknown	SSF50715	Ribosomal protein L25-like	coord: 60..249 score: 1.36
IPR020056	Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain	GENE3D	G3DSA:2.40.240.10		coord: 55..160 score: 9.4
IPR020057	Ribosomal protein L25, beta domain	GENE3D	G3DSA:2.170.120.20		coord: 167..256 score: 4.9
IPR020057	Ribosomal protein L25, beta domain	PFAM	PF14693	Ribosomal_TL5_C	coord: 168..250 score: 6.0
None	No IPR available	PANTHER	PTHR33284	FAMILY NOT NAMED	coord: 1..258 score: 6.2E
None	No IPR available	PANTHER	PTHR33284:SF1	RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN	coord: 1..258 score: 6.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g06880	Cucsa.338120	Cucumber (Gy14) v1	cgycpeB0899
Cp4.1LG08g06880	CmaCh06G009030	Cucurbita maxima (Rimu)	cmacpeB855
Cp4.1LG08g06880	CmoCh06G009270	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g06880	Cla002916	Watermelon (97103) v1	cpewmB836
Cp4.1LG08g06880	Csa3G822380	Cucumber (Chinese Long) v2	cpecuB853
Cp4.1LG08g06880	MELO3C009795	Melon (DHL92) v3.5.1	cpemeB800
Cp4.1LG08g06880	ClCG10G015820	Watermelon (Charleston Gray)	cpewcgB774
Cp4.1LG08g06880	CSPI03G38210	Wild cucumber (PI 183967)	cpecpiB855
Cp4.1LG08g06880	Lsi03G015650	Bottle gourd (USVL1VR-Ls)	cpelsiB710
Cp4.1LG08g06880	MELO3C009795.2	Melon (DHL92) v3.6.1	cpemedB941
Cp4.1LG08g06880	CsaV3_3G040630	Cucumber (Chinese Long) v3	cpecucB1050
Cp4.1LG08g06880	Bhi11G002381	Wax gourd	cpewgoB1081
Cp4.1LG08g06880	Carg26087	Silver-seed gourd	carcpeB0445

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g06880	Cucurbita pepo (Zucchini)	cpecpeB486
Cp4.1LG08g06880	Cucurbita maxima (Rimu)	cmacpeB295
Cp4.1LG08g06880	Cucurbita moschata (Rifu)	cmocpeB258
Cp4.1LG08g06880	Cucumber (Gy14) v2	cgybcpeB451
Cp4.1LG08g06880	Cucumber (Chinese Long) v3	cpecucB1058