Cp4.1LG08g06710 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g06710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	HNH endonuclease
Location	Cp4.1LG08 : 109583 .. 112349 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCAATTCACCGCACACAGTCGGGTTAAGTTGTTGCTCAACGGAGACGGAGTGCCATTCGGTTCAGAACCAAAAGATCGTTCGAGACACAAGCTCAGATCAGTACGAACCCTTAAGCGAAGAACTCCCTTATCCGGTGCCTCCTCCACTGGACTTTCCCCTTCGTCGTCCTCGGCTTCAGCTTTGAGGAAATCCGCTCAGCGTGTCGGTGTGAGGGGTGAGAGCGTTAGCGGAGACGACGCCATTCTTGATATTGACTATGATTACGAGTTTGAGAGTGACGATCTGGCTTGCTTCAGAGGTCTCGTCTTGGATATTTCCTACAGGTAATGTTATTCCACTTCATACCCACTTGGTTATAGGGAGATTATTGGAAAGCTGTTTGAATATTAATTGTGGCATAATCGGAAGTTAGTTAATTGTGGATGGCTATAAATAGGGGGAGTTCGGAGTTTAAGCATAATTTTAGGAATTGGTGTACTGTAGATCTTAGGAAAGAGATAGCCATTACCTTTTGATATGTCCTGTATGCAGTGCCATGCACTGAATAAAACGAACAAACACAAATAAACTCGACTCCATTTCTGTATGTGGAATGGAGTGACCTCCACTTTTTTGTGTATACTTGTTTCATGTTGCTTTGATATCTCCATATTGTTTGTATGACTGGAAAGGTTGTAATTTATCTTTTGCTATTGATTTCCTTGCTTTAGGCCAGTTAACGTTGTTTGTTGGAAGCGTGCAATTTGTTTGGAGTTCATGGAGAAGGTTTGACCAATCTCTTTTACATATTATTTTCCATTGGTTTTCGTCATGAATAGGGAAATATGTCCAACTTCCAAGAGAGAAAAACAAAATGGGAATTGCTAAATGCTTTGATATTTAAATCCAAAGGGAATAAGGAAACTGTCAGTTCCACAAAAGATGATCACGATCCTTTTCTTGCTGACGATAAAAGGACACAGAACTAAAGAAAAAATGGCAATGAATACGATGTTGGGTGTCCACGCTATCATGTAAAACTATTTGCAGAAAGTCTGTGAATTTTAAATCTTGATTATGGATTTCAAAAGGCTTAGATAAGGGTTTGGTTCTATCAATTGATTGAGGTCGATCGAGCAGTTTTGAATCCACTGTAAATGTTAACAGTGCATGTTTCGATATGTCTATCTCAAACCTTATTTGCTTTTCCAGGCTGATGTATTGGAATACTATGACCAGACTGTGAGTTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTAAGGGTATGCATCAAACATGTATCTGGTTCATTCATGGAATTTTTTTCACAGGGTTTTACTTATTCCAATCTTTACTTCCATAACCAGGAGAAGCTCAACACTGAACTCATCTTTTTTTACTTGAGTCTTGTATTTTTCTATGGCCTTTGAAGTAAGTAACTATACCATCTCCCCTGTCAGGTTCCTCATTTATTGCAAGTTGTAAAGAGAAGAAGAATCAAGCAGTCTTTGAGTCGTAAAAACATCCTTTATCGGGACAATTACACTTGTCAGTAAGTTGCTCAATTTATCATTTAAATTTGAAATGGAAGAAGTTATTTTGAGATGCTTTGCTAATTTTATGATTCGATTACATAATCATTTTAATTGTAGTTTCATTAAAAACCTGAATAGCCTCTGAATTTCATGTGAGCTTGTCCCTTTAGTAGATTTAGGTCTTTTTAAATTCTCAACTCTACTTTCAATAGGAAGGCTTAACTAGACTATTAATATTGAAATGAGGAAGATATTTGCTATGAATTCTTTTCAGTTCTTGTTATTTTGTGGCAAAGGGTGAATATTAATTTCAACCAATGCTATCTTTGTATGCTGTCTCATTTTTCTTTATTTTTTCGTTGCCTTAAATGGGCCTCTTCAACAGGTATTGTTCATCACATGAGAGTTTGACGATTGACCATGTTTTGCCCGTGTCTCGGGGTGGAGAATGGACATGGGAAAATCTGGTGAGTTATCTATCCGGTAGATATTAATATAAGATTACAAATGCTCAACTGAATTTTCAATCATCGAAAGACTGAAGACGTCTTTGTTGAATCTTCACACCTGATCCAGGCTGACCCCTGTCCTCTCATGTTATAACAGGTGGCCGCCTGCGTGAAATGCAATTCAAAGAAAGGGCAAAAAACTGTTGAAGAAGCAAATATGAAGCTGAAAAAGACTCCCAAGGTAATATTATATTATGTTTCGTTTACATTGTTTGATCTCTTCAACGTAGCGGCATGCCCTTTTTAGAAGACGATTGAGTCTCCCAGTCTTTTGTTCCATTCTCAAGTCTCTGAACTTATGAAGTCTCGTTTCTGTAGTAGACCAATTTGTTAACACCCCTTAGCCATTTTTTATTAACATAATGACACCAAGCCCTTGTTGCAGCCTGGACTACTTTATCCGCTGCTTTACTTTTGGTGTCTCAATGCATCTAGTTCAGGCTTACTTATGGGTTTTGACACCTTGAATCTTGCAGGCCCCAAAAGATTATGACATACTTGCCATTCCTCTAACCAGTACCGCAATAAAGATGTTGAAACTCAGAAAGGGGACCCCTGAAGAATGGCGTCAATATCTGTCGAGTGAGCAATGACGTGCACTCATAATGGCACTTGTAAATTCTTCTTTGAACAAATTGCACATATCATACATACACTTGTTTCTTCTAAGACTTCGGCACCTTCAAACTAATTTATTCTATCATTACTTCCAACAAGCATTTTGCATTTCTTTT

mRNA sequence

ATGGCCCAATTCACCGCACACAGTCGGGTTAAGTTGTTGCTCAACGGAGACGGAGTGCCATTCGGTTCAGAACCAAAAGATCGTTCGAGACACAAGCTCAGATCAGTACGAACCCTTAAGCGAAGAACTCCCTTATCCGGTGCCTCCTCCACTGGACTTTCCCCTTCGTCGTCCTCGGCTTCAGCTTTGAGGAAATCCGCTCAGCGTGTCGGTGTGAGGGGTGAGAGCGTTAGCGGAGACGACGCCATTCTTGATATTGACTATGATTACGAGTTTGAGAGTGACGATCTGGCTTGCTTCAGAGTTAACGTTGTTTGTTGGAAGCGTGCAATTTGTTTGGAGTTCATGGAGAAGGCTGATGTATTGGAATACTATGACCAGACTGTGAGTTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTAAGGGTTCCTCATTTATTGCAAGTTGTAAAGAGAAGAAGAATCAAGCAGTCTTTGAGTCGTAAAAACATCCTTTATCGGGACAATTACACTTGTCAGTATTGTTCATCACATGAGAGTTTGACGATTGACCATGTTTTGCCCGTGTCTCGGGGTGGAGAATGGACATGGGAAAATCTGGCCCCAAAAGATTATGACATACTTGCCATTCCTCTAACCAGTACCGCAATAAAGATGTTGAAACTCAGAAAGGGGACCCCTGAAGAATGGCGTCAATATCTGTCGAGTGAGCAATGACGTGCACTCATAATGGCACTTGTAAATTCTTCTTTGAACAAATTGCACATATCATACATACACTTGTTTCTTCTAAGACTTCGGCACCTTCAAACTAATTTATTCTATCATTACTTCCAACAAGCATTTTGCATTTCTTTT

Coding sequence (CDS)

ATGGCCCAATTCACCGCACACAGTCGGGTTAAGTTGTTGCTCAACGGAGACGGAGTGCCATTCGGTTCAGAACCAAAAGATCGTTCGAGACACAAGCTCAGATCAGTACGAACCCTTAAGCGAAGAACTCCCTTATCCGGTGCCTCCTCCACTGGACTTTCCCCTTCGTCGTCCTCGGCTTCAGCTTTGAGGAAATCCGCTCAGCGTGTCGGTGTGAGGGGTGAGAGCGTTAGCGGAGACGACGCCATTCTTGATATTGACTATGATTACGAGTTTGAGAGTGACGATCTGGCTTGCTTCAGAGTTAACGTTGTTTGTTGGAAGCGTGCAATTTGTTTGGAGTTCATGGAGAAGGCTGATGTATTGGAATACTATGACCAGACTGTGAGTTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTAAGGGTTCCTCATTTATTGCAAGTTGTAAAGAGAAGAAGAATCAAGCAGTCTTTGAGTCGTAAAAACATCCTTTATCGGGACAATTACACTTGTCAGTATTGTTCATCACATGAGAGTTTGACGATTGACCATGTTTTGCCCGTGTCTCGGGGTGGAGAATGGACATGGGAAAATCTGGCCCCAAAAGATTATGACATACTTGCCATTCCTCTAACCAGTACCGCAATAAAGATGTTGAAACTCAGAAAGGGGACCCCTGAAGAATGGCGTCAATATCTGTCGAGTGAGCAATGA

Protein sequence

MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSASALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRVNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ

Homology

[Close]

BLAST of Cp4.1LG08g06710 vs. TrEMBL
Match: A0A0A0LG99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G844900 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.6e-101
Identity = 206/283 (72.79%), Postives = 218/283 (77.03%), Query Frame = 1


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAH+R+KLLLNGDG+PFGSE KDR R+KLRSVR   RR PLS  SS+    ++SS 
Sbjct: 1   MAQFTAHTRLKLLLNGDGLPFGSESKDRFRYKLRSVRP--RRFPLSRPSSS----TTSST 60

Query: 61  SALRKSAQ-----RVGVRGESVSG-DDAILDIDYDYEFESDDLACFR----------VNV 120
           SALRK  Q     RVGVR ESV+G DD ++  DYDYE ESDDLACFR          VNV
Sbjct: 61  SALRKPTQHAAEVRVGVRDESVNGGDDDVVGFDYDYELESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENL----------------------- 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENL                       
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

[Close]

BLAST of Cp4.1LG08g06710 vs. TrEMBL
Match: A0A067KUE0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02737 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.4e-75
Identity = 160/283 (56.54%), Postives = 184/283 (65.02%), Query Frame = 1


Query: 1   MAQFTAHSRVKLLLNGDGVPF---------GSEPKDRSRHKLRSVRTLKRRTPLSGASST 60
           MAQFTA  R+KLL N DGV F         G       + KLR + +  R+         
Sbjct: 1   MAQFTAQGRLKLLFNSDGVHFKLLGNGFVGGLRSFQLQKGKLRYIGSCTRQY-------- 60

Query: 61  GLSPSSSSASALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFR---------- 120
                   AS+L K ++   V   S+ G D+    DYD EFE+DDLACFR          
Sbjct: 61  --------ASSLSKKSRHFKVEA-SLYGSDSDESEDYDSEFETDDLACFRGLVLDISYRP 120

Query: 121 VNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLS 180
           VNVVCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLR+PHLLQVVKRRRI+Q+LS
Sbjct: 121 VNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRIPHLLQVVKRRRIRQNLS 180

Query: 181 RKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLA------------------- 237
           RKNIL+RDNYTCQYCSS E+LTIDHVLP++RGGEWTWENL                    
Sbjct: 181 RKNILFRDNYTCQYCSSRENLTIDHVLPIARGGEWTWENLVAACAKCNSKKGQKTIEEAN 240

[Close]

BLAST of Cp4.1LG08g06710 vs. TrEMBL
Match: A0A164X601_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019882 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.3e-73
Identity = 155/280 (55.36%), Postives = 193/280 (68.93%), Query Frame = 1


Query: 1   MAQFT-AHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSS 60
           MAQ   AH++VK L NGDG+  G EP+D+S  +LRS    KR+   +G+SST L  SSSS
Sbjct: 1   MAQLIKAHTQVKPLFNGDGMLIGFEPRDQSITRLRSH---KRKVKFNGSSSTKLFASSSS 60

Query: 61  ASALRKSAQRVGVRGESVSGDDAILDIDYDYEFES-----DDLACFR----------VNV 120
           +  +  S++    +    SGD +  ++ YD  F+      DDL+CFR          +NV
Sbjct: 61  S--VSSSSESYKFKQPVDSGDGSSYNVGYDLFFDDPEYVRDDLSCFRGLVLDISYRPINV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYD+TV+SPSGSFYIPAVLRVPHLLQVVKRRRIK +LSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDRTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKSTLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENL----------------------- 237
           +L RDN+TCQYCSS E+LTIDHV+P++ GGEWTWENL                       
Sbjct: 181 VLARDNFTCQYCSSTENLTIDHVIPIALGGEWTWENLVTACARCNSRKGQKTLEEANMKL 240

[Close]

BLAST of Cp4.1LG08g06710 vs. TrEMBL
Match: A0A0B2PKM0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_038201 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.7e-72
Identity = 160/288 (55.56%), Postives = 187/288 (64.93%), Query Frame = 1


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFT   R+KLLLNG+GV    E KD   +K RSV+T KRRT  +G+S+     S+SS 
Sbjct: 1   MAQFTTQGRLKLLLNGEGVSSVLEHKDPFLYKCRSVQTHKRRTRYAGSSARIYYASTSSL 60

Query: 61  SALRKSAQRVGVRGESVSGDDAILD----IDYDYE---------FESDDLACFR------ 120
           S+    + R        SG+ ++ D    ID D +         F+ D L+CFR      
Sbjct: 61  SS---KSHRCNAEARHTSGNGSVHDEYDDIDDDEDEDDEEEEDVFDRDGLSCFRGLVLDI 120

Query: 121 ----VNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIK 180
               VNVV WKRAICLEFMEKADVLEYY +TV+SPSGSFYIPAVLRVPHLLQVVKRR IK
Sbjct: 121 AYRPVNVVGWKRAICLEFMEKADVLEYYAKTVNSPSGSFYIPAVLRVPHLLQVVKRRIIK 180

Query: 181 QSLSRKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLA--------------- 238
            +LSRKNIL+RDNYTCQYCSSHE+LTIDHV+P + GGEWTWENL                
Sbjct: 181 NNLSRKNILFRDNYTCQYCSSHENLTIDHVVPAALGGEWTWENLVTACAKCNCKKGRKTL 240

[Close]

BLAST of Cp4.1LG08g06710 vs. TrEMBL
Match: A0A061F9Q2_THECC (HNH endonuclease OS=Theobroma cacao GN=TCM_026452 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.7e-72
Identity = 158/282 (56.03%), Postives = 187/282 (66.31%), Query Frame = 1


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRS--------VRTLKRRTPLSGASSTG 60
           MAQFT   R+KLL +GDGV    EPKD   +KL S        +++L+ +  L    ST 
Sbjct: 1   MAQFTPQGRLKLLFHGDGV----EPKDPFHYKLVSNVFGGSGGLKSLQAQRRLRFLGSTA 60

Query: 61  LSPSSSSASALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFR----------V 120
                SS+  L+K ++       +VS +    + DYD +FE+ +LACFR          V
Sbjct: 61  TRQYFSSS--LKKGSKFNAKVRPNVSDEGFYDEEDYDSDFETGNLACFRGLVLDISYRPV 120

Query: 121 NVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSR 180
           NVVCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRI+ +LSR
Sbjct: 121 NVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIRTNLSR 180

Query: 181 KNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLA-------------------- 237
           KN+L+RDN+TCQYCS+HE+LTIDHVLPV+RGGEW WENL                     
Sbjct: 181 KNVLFRDNFTCQYCSAHENLTIDHVLPVARGGEWKWENLVAACAKCNSKKGQKTLEEANM 240

[Close]

BLAST of Cp4.1LG08g06710 vs. TAIR10
Match: AT2G23840.1 (AT2G23840.1 HNH endonuclease)

HSP 1 Score: 251.9 bits (642), Expect = 3.9e-67
Identity = 147/285 (51.58%), Postives = 181/285 (63.51%), Query Frame = 1


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60
           MA F+A  R+KLL + DG+ FG + +D+ R   +S+      +PL     + L   +   
Sbjct: 1   MAHFSA--RLKLLSSNDGLSFGVDSRDQFR---QSLYMAGGGSPLVPIRMSRLKFCARIF 60

Query: 61  SALRKSAQRVGVRGESVSGDDAILDIDYD---YEFESDD--------LACFR-------- 120
           S+     +R  +R   +   +  LDID D   ++F+ DD        L+CFR        
Sbjct: 61  SSYSFPYKRKKIR--DLDNTEKNLDIDEDNDEWDFDGDDDGLETDDHLSCFRGLVLDISY 120

Query: 121 --VNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQS 180
             VNVVCWKRAICLE+M+KADVLEYYDQTVSSP+GSFYIPAVLRVPHLLQVVKRRR+K S
Sbjct: 121 RPVNVVCWKRAICLEYMDKADVLEYYDQTVSSPTGSFYIPAVLRVPHLLQVVKRRRVKNS 180

Query: 181 LSRKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLA----------------- 237
           LSRKNIL RD+YTCQYCSS E+LTIDHV+PVSRGGEWTW+NL                  
Sbjct: 181 LSRKNILLRDDYTCQYCSSRENLTIDHVMPVSRGGEWTWQNLVAACSRCNSRKGQKTADE 240

[Close]

BLAST of Cp4.1LG08g06710 vs. NCBI nr
Match: gi|659130766|ref|XP_008465340.1| (PREDICTED: uncharacterized protein LOC103502982 [Cucumis melo])

HSP 1 Score: 384.0 bits (985), Expect = 1.9e-103
Identity = 212/283 (74.91%), Postives = 219/283 (77.39%), Query Frame = 1


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDG+P GSE KDR R+KLRSVR   RR PLS  SS     S+SS 
Sbjct: 1   MAQFTAHSRVKLLLNGDGLPCGSESKDRFRYKLRSVRA--RRFPLSAPSS-----STSST 60

Query: 61  SALRKSAQ-----RVGVRGESVSG-DDAILDIDYDYEFESDDLACFR----------VNV 120
           SALRKS Q     RVGVR ESV+G DDAI+  DYDYEFESDDLACFR          VNV
Sbjct: 61  SALRKSTQHAAEVRVGVRDESVTGGDDAIVGFDYDYEFESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENL----------------------- 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENL                       
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

[Close]

BLAST of Cp4.1LG08g06710 vs. NCBI nr
Match: gi|449446780|ref|XP_004141149.1| (PREDICTED: uncharacterized protein LOC101207660 [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 5.1e-101
Identity = 206/283 (72.79%), Postives = 218/283 (77.03%), Query Frame = 1


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAH+R+KLLLNGDG+PFGSE KDR R+KLRSVR   RR PLS  SS+    ++SS 
Sbjct: 1   MAQFTAHTRLKLLLNGDGLPFGSESKDRFRYKLRSVRP--RRFPLSRPSSS----TTSST 60

Query: 61  SALRKSAQ-----RVGVRGESVSG-DDAILDIDYDYEFESDDLACFR----------VNV 120
           SALRK  Q     RVGVR ESV+G DD ++  DYDYE ESDDLACFR          VNV
Sbjct: 61  SALRKPTQHAAEVRVGVRDESVNGGDDDVVGFDYDYELESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENL----------------------- 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENL                       
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

[Close]

BLAST of Cp4.1LG08g06710 vs. NCBI nr
Match: gi|1009167896|ref|XP_015902367.1| (PREDICTED: uncharacterized protein LOC107435306 [Ziziphus jujuba])

HSP 1 Score: 306.2 bits (783), Expect = 5.0e-80
Identity = 172/284 (60.56%), Postives = 195/284 (68.66%), Query Frame = 1


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTA  RVK L NG+GV FG EPKD     LRS++  KRR   S + ST L  SS S+
Sbjct: 1   MAQFTAQGRVKSLFNGEGVSFGLEPKDPFHKMLRSIQPHKRR--FSFSRSTRLYSSSYSS 60

Query: 61  SALRKSAQR---------VGVRGESVSGDDAILDID-YDYEFESDDLACFR--------- 120
           S L K   +         +    ESV+ +DA+   D YD EFE+D+LACFR         
Sbjct: 61  SKLDKHKHKHTDFSSDACLSAGDESVNREDAVKADDFYDDEFETDNLACFRGLVLDISYR 120

Query: 121 -VNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSL 180
            VNVVCWKRAICLEFMEKADVLEYYDQTV+SP+GSFYIPAVLRVPHLLQVVKRRRIK +L
Sbjct: 121 PVNVVCWKRAICLEFMEKADVLEYYDQTVNSPTGSFYIPAVLRVPHLLQVVKRRRIKSNL 180

Query: 181 SRKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENL------------------- 237
           SRKNILYRD+YTCQYCSS E+LTIDHVLP +RGGEW WENL                   
Sbjct: 181 SRKNILYRDSYTCQYCSSRENLTIDHVLPSARGGEWEWENLVAACAKCNSKKGQKTLEEA 240

[Close]

BLAST of Cp4.1LG08g06710 vs. NCBI nr
Match: gi|802585524|ref|XP_012070474.1| (PREDICTED: uncharacterized protein LOC105632645 isoform X1 [Jatropha curcas])

HSP 1 Score: 289.3 bits (739), Expect = 6.3e-75
Identity = 160/283 (56.54%), Postives = 184/283 (65.02%), Query Frame = 1


Query: 1   MAQFTAHSRVKLLLNGDGVPF---------GSEPKDRSRHKLRSVRTLKRRTPLSGASST 60
           MAQFTA  R+KLL N DGV F         G       + KLR + +  R+         
Sbjct: 1   MAQFTAQGRLKLLFNSDGVHFKLLGNGFVGGLRSFQLQKGKLRYIGSCTRQY-------- 60

Query: 61  GLSPSSSSASALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFR---------- 120
                   AS+L K ++   V   S+ G D+    DYD EFE+DDLACFR          
Sbjct: 61  --------ASSLSKKSRHFKVEA-SLYGSDSDESEDYDSEFETDDLACFRGLVLDISYRP 120

Query: 121 VNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLS 180
           VNVVCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLR+PHLLQVVKRRRI+Q+LS
Sbjct: 121 VNVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRIPHLLQVVKRRRIRQNLS 180

Query: 181 RKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLA------------------- 237
           RKNIL+RDNYTCQYCSS E+LTIDHVLP++RGGEWTWENL                    
Sbjct: 181 RKNILFRDNYTCQYCSSRENLTIDHVLPIARGGEWTWENLVAACAKCNSKKGQKTIEEAN 240

[Close]

BLAST of Cp4.1LG08g06710 vs. NCBI nr
Match: gi|1021034969|gb|KZM92753.1| (hypothetical protein DCAR_019882 [Daucus carota subsp. sativus])

HSP 1 Score: 282.3 bits (721), Expect = 7.7e-73
Identity = 155/280 (55.36%), Postives = 193/280 (68.93%), Query Frame = 1


Query: 1   MAQFT-AHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSS 60
           MAQ   AH++VK L NGDG+  G EP+D+S  +LRS    KR+   +G+SST L  SSSS
Sbjct: 1   MAQLIKAHTQVKPLFNGDGMLIGFEPRDQSITRLRSH---KRKVKFNGSSSTKLFASSSS 60

Query: 61  ASALRKSAQRVGVRGESVSGDDAILDIDYDYEFES-----DDLACFR----------VNV 120
           +  +  S++    +    SGD +  ++ YD  F+      DDL+CFR          +NV
Sbjct: 61  S--VSSSSESYKFKQPVDSGDGSSYNVGYDLFFDDPEYVRDDLSCFRGLVLDISYRPINV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYD+TV+SPSGSFYIPAVLRVPHLLQVVKRRRIK +LSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDRTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKSTLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENL----------------------- 237
           +L RDN+TCQYCSS E+LTIDHV+P++ GGEWTWENL                       
Sbjct: 181 VLARDNFTCQYCSSTENLTIDHVIPIALGGEWTWENLVTACARCNSRKGQKTLEEANMKL 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g06710 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g06710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG99_CUCSA	3.6e-101	72.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G844900 PE=4 SV=1	[more]
A0A067KUE0_JATCU	4.4e-75	56.54	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02737 PE=4 SV=1	[more]
A0A164X601_DAUCA	5.3e-73	55.36	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019882 PE=4 SV=1	[more]
A0A0B2PKM0_GLYSO	2.7e-72	55.56	Uncharacterized protein OS=Glycine soja GN=glysoja_038201 PE=4 SV=1	[more]
A0A061F9Q2_THECC	2.7e-72	56.03	HNH endonuclease OS=Theobroma cacao GN=TCM_026452 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g06710 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23840.1	3.9e-67	51.58	HNH endonuclease	[more]

BLAST of Cp4.1LG08g06710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130766\|ref\|XP_008465340.1\|	1.9e-103	74.91	PREDICTED: uncharacterized protein LOC103502982 [Cucumis melo]	[more]
gi\|449446780\|ref\|XP_004141149.1\|	5.1e-101	72.79	PREDICTED: uncharacterized protein LOC101207660 [Cucumis sativus]	[more]
gi\|1009167896\|ref\|XP_015902367.1\|	5.0e-80	60.56	PREDICTED: uncharacterized protein LOC107435306 [Ziziphus jujuba]	[more]
gi\|802585524\|ref\|XP_012070474.1\|	6.3e-75	56.54	PREDICTED: uncharacterized protein LOC105632645 isoform X1 [Jatropha curcas]	[more]
gi\|1021034969\|gb\|KZM92753.1\|	7.7e-73	55.36	hypothetical protein DCAR_019882 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003615	HNH_nuc

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009409	response to cold
biological_process	GO:0009269	response to desiccation
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g06710.1	Cp4.1LG08g06710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003615	HNH nuclease	SMART	SM00507	HNH_5	coord: 160..208 score: 6.
None	No IPR available	PANTHER	PTHR33877	FAMILY NOT NAMED	coord: 1..237 score: 2.5
None	No IPR available	PANTHER	PTHR33877:SF2	SUBFAMILY NOT NAMED	coord: 1..237 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g06710	Cucsa.340650	Cucumber (Gy14) v1	cgycpeB0902
Cp4.1LG08g06710	CmaCh06G017440	Cucurbita maxima (Rimu)	cmacpeB853
Cp4.1LG08g06710	CmoCh06G017310	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g06710	Cla017186	Watermelon (97103) v1	cpewmB831
Cp4.1LG08g06710	Csa3G844900	Cucumber (Chinese Long) v2	cpecuB865
Cp4.1LG08g06710	MELO3C026901	Melon (DHL92) v3.5.1	cpemeB798
Cp4.1LG08g06710	ClCG10G013230	Watermelon (Charleston Gray)	cpewcgB769
Cp4.1LG08g06710	CSPI03G40910	Wild cucumber (PI 183967)	cpecpiB867
Cp4.1LG08g06710	Lsi03G012840	Bottle gourd (USVL1VR-Ls)	cpelsiB709
Cp4.1LG08g06710	MELO3C026901.2	Melon (DHL92) v3.6.1	cpemedB939
Cp4.1LG08g06710	CsaV3_3G043400	Cucumber (Chinese Long) v3	cpecucB1061
Cp4.1LG08g06710	Bhi11G001281	Wax gourd	cpewgoB1077
Cp4.1LG08g06710	CsGy3G038370	Cucumber (Gy14) v2	cgybcpeB458
Cp4.1LG08g06710	Carg23329	Silver-seed gourd	carcpeB0389

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g06710	Cucurbita maxima (Rimu)	cmacpeB293
Cp4.1LG08g06710	Cucurbita pepo (Zucchini)	cpecpeB490