Carg23329 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23329
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	HNH endonuclease
Location	Cucurbita_argyrosperma_scaffold_188 : 370877 .. 374198 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCAATTCACCGCACACAGTCGGGTTAAGTTGTTGCTCAACGGAGACGGAGTGCCATTCGGTTCAGAACCAAAAGATCGTTCGAGACAAAAGCTCAGATCACTACGAACCCTTAAGCGAAGAACTCCTTTATCCGGTGCCTCCTCCACTGGACTTTCCCCTTCGTCGTCCTCGGCTTCAGCTTTGAGGAAATCCGCTCAGCGTGTCGGTGTGAGGGGTGAGAGCGTTAGCGGAGACGACGCCATTCTTGATATTGACTATGATTACGAGTTTGAGAGCGACGATCTGGCTTGCTTCAGAGGTCTCGTCTTGGATATTTCCTACAGGTAATGTTATTCCACTTCATACCCACTTGGTTATAGGGAGATTATTGGAAAGCTGTTTGAATATTAATTGTGGCATAATCGGAAGTTAGTTAATTGTAGATGGCTATAAATAGGGGGAATTCGGAGTTTAAGAATTAAGCATAATTTTAGGAATTGGTGTACTGTAGATCTTAGGAAAGAGATAGCCATTACCTTTTGATATGTCCTGTATCCGGTACCATGCACTGAATAAAACGAACAAACACAAATAAACTTGACTCCATTTCTGTATGTGGAATGGAGTGACCTCCACTTTTTTGTGTGTACTTGTTTCATGTTGCTTTGATATCTCCATATTGTTTGTATGACTGGAAAGGTTGTAATTTATCTTTTGCTGTTGATTTCCTTGCTTTAGGCCAGTTAACGTTGTTTGTTGGAAGCGTGCAATTTGTTTGGAGTTCATGGAGAAGGTTTGACCAATCTCTTTTACATATTATTTTCCATTGGTTTTCGCCATGAATAGGGAAATATGTCCAACTTCCGAGAGCGAAAAACAAAATGGGAATTGCTAAATGCTTTGATATTTAAATCCAAAGGGAATAAGGAAACTGTCAGTTCCACAAAAGATGACGATCCTTTTCTTGCTGACGATAAAAGGACACAGAACTAAAGAAAAAATGGCAATGAATACGATGTTGGGTGTCCACGCTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATCCCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCACATCCTAAATTAGTCGATGTGGGACTTCCATCATCCAACACCTCCCCTCGAACAAAGTGCGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTGACGGCCTTCGAGGAGGGCTTAGCTCCTTTTCTTTAAGAGTTCTTTGTTCGATATTTGAGGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATGCCAATGGAGTTAATATTCCTCACTTATAAACCCATGATCACACCCTAAATTAGTCGATGTGGGACTTCCATCATCCAACACACGCTATCATGTAAAACTATTTGCAGAAAGTCTGTGAATTTTAAATCTTGATTTTGGATTTCAAAAGGCTTAGATAAGGGCTTGGTTCTTATCAATTGATTGAGGTTGATCGAGTAGTTTTGAATCCACTGTAAATGTTAACATTGCATGTTTCGATATGTCTATCTCAAACCTTATTTGCTTTTCCAGGCTGATGTATTGGAATACTATGACCAGACTGTGAGTTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTAAGGGTATGCATCAAACATTTATCTGATTCATTCATGGACTTTTTTTCACTGGATTTTACTTATTTCAATCTTTACTTCCATAACCAGGAGAAGCTCAACACTGAACTCATCTTTTTTTACTTGAGTCTTGTATTTTTCTAAGGCCTTTGAAGTAAGTAACTATGCCATCTCCCCTGTCAGGTTCCTCATTTATTGCAAGTTGTAAAGAGAAGAAGAATCAAGCAGTCTTTGAGTCGTAAAAACATCCTTTATCGGGACAATTACACTTGTCAGTAAGTTGCTCAATTTATCATTTAAATTTGAAATGGAAGAAGTTATTTTGAGATGCTTTGCTAATTTTATGATTCGATTACATAATCATTTTAATTGTAGTTTCATTAAAAACCTGAATAGCCTCTGAATTTCATTAAAAACCTGAATAGCCTCTGAATTTCATTAAAAACCTAATTAATCCTTTATCGGGACAATTACACTTGTCCCTTTAGTAGATTTAGGTCCTTTTAAATTCTCAACACTACTTTCAATAGGAAGGCTTAACTAGACTATTAATATTGAAATGAGGAAGATATTTGCTATTTTTCTTTATTTTTTCGTTGCCTTAAATGGGCCTCTTCAACAGGTATTGTTCATCACATGAGAGTTTGACGATTGACCATGTTTTGCCCGTGTCTCGGGGTGGAGAATGGACATGGGAAAATCTGGTGAGTTATCTATCCGGTAGATATCAATATAAGATTACAAATGCTCAACTGAATTTTCAATCATCGAAAGACTGAAGACGTCTTTGTTGAATCTTCACACCTGATCCAGGCTGACCCCTGTCCTCTCATGTTATAACAGGTGGCCGCCTGCGTGAAATGCAATTCAAAGAAAGGGCAAAAAACTGTTGAAGAAGCAAATATGAAGCTGAAAAAGACTCCCAAGGTAATATTATATTATGTTTCGTTTACCATGTTTGATCTCTTCAACATCGCGGCATCCCTTTTCAGAAGAGGGTTGAGTCCTCCCGTCTCTCAAGTCCTTGAACTTAAAGTCTCGTTTCTGTAGTAGACCATTTGTTAACATCTCCTAAATCATTTTTTATTAACATAATGACCCTGAACCCTTGTTGCAGCCCGAGCTACGAATCCTCTGCTTTATTTTTGGTGTCTCAATCCATCTAGTTAAGGCTTATTTATGGGTTTTGACACCTTGAATTTGCAGGCACCAAAAGATTATGACATACTTGCCATTCCTCTAACCAGTACCGCAATAAAGATGTTGAAACTCAGGAAGGGGACCCCTGAAGAATGGCGTCAATATCTGTCGAGTGAGCAATGACGTACACTCATAATGGCACTTGTAAATTCTTCTTTGAACAAATTGCACATATCATACATACACTTGTTTCTTCTAATACTTCGGCACCTTCAAACTAATTTATTCTATCATTACTCCCACAAGCATTTTGCATTTTGCTTCTTAATTTGGATTGATTTTCTAAAACATACTTTAGAAAAATTAAGTTTGA

mRNA sequence

ATGGCCCAATTCACCGCACACAGTCGGGTTAAGTTGTTGCTCAACGGAGACGGAGTGCCATTCGGTTCAGAACCAAAAGATCGTTCGAGACAAAAGCTCAGATCACTACGAACCCTTAAGCGAAGAACTCCTTTATCCGGTGCCTCCTCCACTGGACTTTCCCCTTCGTCGTCCTCGGCTTCAGCTTTGAGGAAATCCGCTCAGCGTGTCGGTGTGAGGGGTGAGAGCGTTAGCGGAGACGACGCCATTCTTGATATTGACTATGATTACGAGTTTGAGAGCGACGATCTGGCTTGCTTCAGAGGTCTCGTCTTGGATATTTCCTACAGGCCAGTTAACGTTGTTTGTTGGAAGCGTGCAATTTGTTTGGAGTTCATGGAGAAGGCTGATGTATTGGAATACTATGACCAGACTGTGAGTTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTAAGGGTTCCTCATTTATTGCAAGTTGTAAAGAGAAGAAGAATCAAGCAGTCTTTGAGTCGTAAAAACATCCTTTATCGGGACAATTACACTTGTCAGTATTGTTCATCACATGAGAGTTTGACGATTGACCATGTTTTGCCCGTGTCTCGGGGTGGAGAATGGACATGGGAAAATCTGGTGGCCGCCTGCGTGAAATGCAATTCAAAGAAAGGGCAAAAAACTGTTGAAGAAGCAAATATGAAGCTGAAAAAGACTCCCAAGGCACCAAAAGATTATGACATACTTGCCATTCCTCTAACCAGTACCGCAATAAAGATGTTGAAACTCAGGAAGGGGACCCCTGAAGAATGGCGTCAATATCTGTCGAGTGAGCAATGACGTACACTCATAATGGCACTTGTAAATTCTTCTTTGAACAAATTGCACATATCATACATACACTTGTTTCTTCTAATACTTCGGCACCTTCAAACTAATTTATTCTATCATTACTCCCACAAGCATTTTGCATTTTGCTTCTTAATTTGGATTGATTTTCTAAAACATACTTTAGAAAAATTAAGTTTGA

Coding sequence (CDS)

ATGGCCCAATTCACCGCACACAGTCGGGTTAAGTTGTTGCTCAACGGAGACGGAGTGCCATTCGGTTCAGAACCAAAAGATCGTTCGAGACAAAAGCTCAGATCACTACGAACCCTTAAGCGAAGAACTCCTTTATCCGGTGCCTCCTCCACTGGACTTTCCCCTTCGTCGTCCTCGGCTTCAGCTTTGAGGAAATCCGCTCAGCGTGTCGGTGTGAGGGGTGAGAGCGTTAGCGGAGACGACGCCATTCTTGATATTGACTATGATTACGAGTTTGAGAGCGACGATCTGGCTTGCTTCAGAGGTCTCGTCTTGGATATTTCCTACAGGCCAGTTAACGTTGTTTGTTGGAAGCGTGCAATTTGTTTGGAGTTCATGGAGAAGGCTGATGTATTGGAATACTATGACCAGACTGTGAGTTCTCCAAGTGGATCCTTCTATATACCAGCAGTCTTAAGGGTTCCTCATTTATTGCAAGTTGTAAAGAGAAGAAGAATCAAGCAGTCTTTGAGTCGTAAAAACATCCTTTATCGGGACAATTACACTTGTCAGTATTGTTCATCACATGAGAGTTTGACGATTGACCATGTTTTGCCCGTGTCTCGGGGTGGAGAATGGACATGGGAAAATCTGGTGGCCGCCTGCGTGAAATGCAATTCAAAGAAAGGGCAAAAAACTGTTGAAGAAGCAAATATGAAGCTGAAAAAGACTCCCAAGGCACCAAAAGATTATGACATACTTGCCATTCCTCTAACCAGTACCGCAATAAAGATGTTGAAACTCAGGAAGGGGACCCCTGAAGAATGGCGTCAATATCTGTCGAGTGAGCAATGA

Protein sequence

MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSASALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ

Homology

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BLAST of Carg23329 vs. NCBI nr
Match: XP_022932702.1 (uncharacterized protein LOC111439170 [Cucurbita moschata] >XP_022932703.1 uncharacterized protein LOC111439170 [Cucurbita moschata] >XP_022972084.1 uncharacterized protein LOC111470725 [Cucurbita maxima] >XP_023539770.1 uncharacterized protein LOC111800353 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546.6 bits (1407), Expect = 4.9e-152
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDGVPFGSEPKDRSR KLRS+RTLKRRTPLSGASSTGLSPSSSSA
Sbjct: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRHKLRSVRTLKRRTPLSGASSTGLSPSSSSA 60

Query: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120
           SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA
Sbjct: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120

Query: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180
           ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN
Sbjct: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180

Query: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240
           YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA
Sbjct: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240

Query: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 277

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BLAST of Carg23329 vs. NCBI nr
Match: XP_022152374.1 (uncharacterized protein LOC111020122 [Momordica charantia])

HSP 1 Score: 480.7 bits (1236), Expect = 3.3e-132
Identity = 249/282 (88.30%), Postives = 260/282 (92.20%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFT  +RVKLLLNGDGVPFGSE KDR R KLRS+    RR PLS A+STG+SPS+SSA
Sbjct: 1   MAQFTTLNRVKLLLNGDGVPFGSESKDRLRYKLRSV----RRIPLS-AASTGISPSASSA 60

Query: 61  SALRKSAQ-----RVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVV 120
           SALRKSAQ     RVGVR ESVS D AI+ +D DYEFESDDLACFRGLVLDISYRPVNVV
Sbjct: 61  SALRKSAQHVAEMRVGVRDESVSDDGAIVGLDCDYEFESDDLACFRGLVLDISYRPVNVV 120

Query: 121 CWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNI 180
           CWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKNI
Sbjct: 121 CWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKNI 180

Query: 181 LYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK 240
           LYRDNYTCQYCSSH+SLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK
Sbjct: 181 LYRDNYTCQYCSSHDSLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLK 240

Query: 241 KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLS+EQ
Sbjct: 241 KTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSNEQ 277

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BLAST of Carg23329 vs. NCBI nr
Match: XP_008465340.1 (PREDICTED: uncharacterized protein LOC103502982 [Cucumis melo])

HSP 1 Score: 476.1 bits (1224), Expect = 8.2e-131
Identity = 249/283 (87.99%), Postives = 256/283 (90.46%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDG+P GSE KDR R KLRS+R   RR PLS  SS     S+SS 
Sbjct: 1   MAQFTAHSRVKLLLNGDGLPCGSESKDRFRYKLRSVRA--RRFPLSAPSS-----STSST 60

Query: 61  SALRKSAQ-----RVGVRGESVS-GDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNV 120
           SALRKS Q     RVGVR ESV+ GDDAI+  DYDYEFESDDLACFRGLVLDISYRPVNV
Sbjct: 61  SALRKSTQHAAEVRVGVRDESVTGGDDAIVGFDYDYEFESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

Query: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 276

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BLAST of Carg23329 vs. NCBI nr
Match: XP_004141149.1 (PREDICTED: uncharacterized protein LOC101207660 [Cucumis sativus] >KGN59772.1 hypothetical protein Csa_3G844900 [Cucumis sativus])

HSP 1 Score: 468.0 bits (1203), Expect = 2.2e-128
Identity = 243/283 (85.87%), Postives = 255/283 (90.11%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAH+R+KLLLNGDG+PFGSE KDR R KLRS+R   RR PLS  SS+    ++SS 
Sbjct: 1   MAQFTAHTRLKLLLNGDGLPFGSESKDRFRYKLRSVR--PRRFPLSRPSSS----TTSST 60

Query: 61  SALRKSAQ-----RVGVRGESVS-GDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNV 120
           SALRK  Q     RVGVR ESV+ GDD ++  DYDYE ESDDLACFRGLVLDISYRPVNV
Sbjct: 61  SALRKPTQHAAEVRVGVRDESVNGGDDDVVGFDYDYELESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

Query: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 277

[Close]

BLAST of Carg23329 vs. NCBI nr
Match: XP_015902367.1 (uncharacterized protein LOC107435306 [Ziziphus jujuba])

HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 207/284 (72.89%), Postives = 231/284 (81.34%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTA  RVK L NG+GV FG EPKD   + LRS++  KRR   S + ST L  SS S+
Sbjct: 1   MAQFTAQGRVKSLFNGEGVSFGLEPKDPFHKMLRSIQPHKRR--FSFSRSTRLYSSSYSS 60

Query: 61  SALRK---------SAQRVGVRGESVSGDDAI-LDIDYDYEFESDDLACFRGLVLDISYR 120
           S L K         S   +    ESV+ +DA+  D  YD EFE+D+LACFRGLVLDISYR
Sbjct: 61  SKLDKHXXXHTDFSSDACLSAGDESVNREDAVKADDFYDDEFETDNLACFRGLVLDISYR 120

Query: 121 PVNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSL 180
           PVNVVCWKRAICLEFMEKADVLEYYDQTV+SP+GSFYIPAVLRVPHLLQVVKRRRIK +L
Sbjct: 121 PVNVVCWKRAICLEFMEKADVLEYYDQTVNSPTGSFYIPAVLRVPHLLQVVKRRRIKSNL 180

Query: 181 SRKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEA 240
           SRKNILYRD+YTCQYCSS E+LTIDHVLP +RGGEW WENLVAAC KCNSKKGQKT+EEA
Sbjct: 181 SRKNILYRDSYTCQYCSSRENLTIDHVLPSARGGEWEWENLVAACAKCNSKKGQKTLEEA 240

Query: 241 NMKLKKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLS 275
           NMKL K PKAPKDYDILAIPLT+ AIKML++R+GTPEEW+QYLS
Sbjct: 241 NMKLIKVPKAPKDYDILAIPLTTAAIKMLRMRQGTPEEWQQYLS 282

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BLAST of Carg23329 vs. TAIR10
Match: AT2G23840.1 (HNH endonuclease)

HSP 1 Score: 322.4 bits (825), Expect = 2.7e-88
Identity = 174/283 (61.48%), Postives = 206/283 (72.79%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MA F+A  R+KLL + DG+ FG + +D+ RQ   SL      +PL     + L   +   
Sbjct: 1   MAHFSA--RLKLLSSNDGLSFGVDSRDQFRQ---SLYMAGGGSPLVPIRMSRLKFCARIF 60

Query: 61  SALRKSAQRVGVR--------GESVSGDDAILDIDYDYEFESDD-LACFRGLVLDISYRP 120
           S+     +R  +R                           E+DD L+CFRGLVLDISYRP
Sbjct: 61  SSYSFPYKRKKIRDLDNTEKXXXXXXXXXXXXXXXXXXXXETDDHLSCFRGLVLDISYRP 120

Query: 121 VNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLS 180
           VNVVCWKRAICLE+M+KADVLEYYDQTVSSP+GSFYIPAVLRVPHLLQVVKRRR+K SLS
Sbjct: 121 VNVVCWKRAICLEYMDKADVLEYYDQTVSSPTGSFYIPAVLRVPHLLQVVKRRRVKNSLS 180

Query: 181 RKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEAN 240
           RKNIL RD+YTCQYCSS E+LTIDHV+PVSRGGEWTW+NLVAAC +CNS+KGQKT +EA+
Sbjct: 181 RKNILLRDDYTCQYCSSRENLTIDHVMPVSRGGEWTWQNLVAACSRCNSRKGQKTADEAH 240

Query: 241 MKLKKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLS 275
           MKL K PK PKDYDI+AIPLT+ AI+ML+  KG PEEWRQYL+
Sbjct: 241 MKLLKVPKEPKDYDIVAIPLTNAAIRMLRSNKGMPEEWRQYLA 278

[Close]

BLAST of Carg23329 vs. TrEMBL
Match: tr|A0A1S3CNK0|A0A1S3CNK0_CUCME (uncharacterized protein LOC103502982 OS=Cucumis melo OX=3656 GN=LOC103502982 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 5.4e-131
Identity = 249/283 (87.99%), Postives = 256/283 (90.46%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAHSRVKLLLNGDG+P GSE KDR R KLRS+R   RR PLS  SS     S+SS 
Sbjct: 1   MAQFTAHSRVKLLLNGDGLPCGSESKDRFRYKLRSVRA--RRFPLSAPSS-----STSST 60

Query: 61  SALRKSAQ-----RVGVRGESVS-GDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNV 120
           SALRKS Q     RVGVR ESV+ GDDAI+  DYDYEFESDDLACFRGLVLDISYRPVNV
Sbjct: 61  SALRKSTQHAAEVRVGVRDESVTGGDDAIVGFDYDYEFESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

Query: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 276

[Close]

BLAST of Carg23329 vs. TrEMBL
Match: tr|A0A0A0LG99|A0A0A0LG99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G844900 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.5e-128
Identity = 243/283 (85.87%), Postives = 255/283 (90.11%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTAH+R+KLLLNGDG+PFGSE KDR R KLRS+R   RR PLS  SS+    ++SS 
Sbjct: 1   MAQFTAHTRLKLLLNGDGLPFGSESKDRFRYKLRSVR--PRRFPLSRPSSS----TTSST 60

Query: 61  SALRKSAQ-----RVGVRGESVS-GDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNV 120
           SALRK  Q     RVGVR ESV+ GDD ++  DYDYE ESDDLACFRGLVLDISYRPVNV
Sbjct: 61  SALRKPTQHAAEVRVGVRDESVNGGDDDVVGFDYDYELESDDLACFRGLVLDISYRPVNV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRIK SLSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRIKNSLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240
           ILYRDNYTCQYCSSHESLTIDHVLP+SRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL
Sbjct: 181 ILYRDNYTCQYCSSHESLTIDHVLPISRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240

Query: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 278
           KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ
Sbjct: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLSSEQ 277

[Close]

BLAST of Carg23329 vs. TrEMBL
Match: tr|A0A2P5EN26|A0A2P5EN26_9ROSA (HNH endonuclease OS=Trema orientalis OX=63057 GN=TorRG33x02_174010 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 6.6e-105
Identity = 199/280 (71.07%), Postives = 229/280 (81.79%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTA  RVKLL NGDGVPFG EPKD  + K+RS++  KRR   SG+++   S SSSS 
Sbjct: 1   MAQFTAQGRVKLLFNGDGVPFGLEPKDPFQFKVRSIQPHKRRLKFSGSTTRIHSSSSSSL 60

Query: 61  S-ALRKSAQ-RVGVRGESVSGDDAILDIDYD----YEFESDDLACFRGLVLDISYRPVNV 120
           +     SA+  + V  ESV+ D+ + D D+D      F  D+LACFRGLVLD+SYRP+NV
Sbjct: 61  NKPTNFSAEGHLNVGDESVNSDNEVFDRDFDXXXXXXFARDELACFRGLVLDVSYRPINV 120

Query: 121 VCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKN 180
           VCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLR+PHLLQVVKRRRI  +LSRKN
Sbjct: 121 VCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRIPHLLQVVKRRRINSNLSRKN 180

Query: 181 ILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKL 240
           IL+RD YTCQYCSS E+LTIDHV+P +RGGEW WENLV AC KCNSKKGQKT+ EANMKL
Sbjct: 181 ILHRDGYTCQYCSSRENLTIDHVIPAARGGEWKWENLVTACSKCNSKKGQKTLIEANMKL 240

Query: 241 KKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLS 275
            K PKAPK+YDILAIPLT+ AIKML++R+GTPEEWRQYLS
Sbjct: 241 IKVPKAPKEYDILAIPLTTAAIKMLRMRQGTPEEWRQYLS 280

[Close]

BLAST of Carg23329 vs. TrEMBL
Match: tr|A0A2P5ATV0|A0A2P5ATV0_PARAD (HNH endonuclease OS=Parasponia andersonii OX=3476 GN=PanWU01x14_300670 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.1e-104
Identity = 200/285 (70.18%), Postives = 230/285 (80.70%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTA  RVKLL NGDGVPFG EPKD  + K+RS++  KRR   SG  ST    SSSS+
Sbjct: 1   MAQFTAQGRVKLLFNGDGVPFGLEPKDPFQFKVRSIQPHKRRLKFSG--STTRIYSSSSS 60

Query: 61  SALRKSAQ-----RVGVRGESVSGDDAILDIDY------DYEFESDDLACFRGLVLDISY 120
           S+L K++       + V  ESV+ D+ ++D D+         F  D+LACFRGLVLD+SY
Sbjct: 61  SSLNKASNFSAEGHLNVGDESVNSDNEVVDRDFXXXXXXXXXFARDELACFRGLVLDVSY 120

Query: 121 RPVNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQS 180
           RP+NVVCWKRAICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLRVPHLLQVVKRRRI  +
Sbjct: 121 RPINVVCWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPHLLQVVKRRRINSN 180

Query: 181 LSRKNILYRDNYTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEE 240
           LSRKNIL+RD+YTCQYCSS E+LTIDHV+P +RGGEW WENLV AC KCNSKKGQKT+ E
Sbjct: 181 LSRKNILHRDSYTCQYCSSRENLTIDHVIPAARGGEWKWENLVTACSKCNSKKGQKTLIE 240

Query: 241 ANMKLKKTPKAPKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLS 275
           ANMKL K PKAPK+YDILAIPLT+ AIKML++R+GTPEEW QYLS
Sbjct: 241 ANMKLIKVPKAPKEYDILAIPLTTAAIKMLRMRQGTPEEWLQYLS 283

[Close]

BLAST of Carg23329 vs. TrEMBL
Match: tr|A0A067KUE0|A0A067KUE0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02737 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 9.9e-101
Identity = 195/274 (71.17%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 1   MAQFTAHSRVKLLLNGDGVPFGSEPKDRSRQKLRSLRTLKRRTPLSGASSTGLSPSSSSA 60
           MAQFTA  R+KLL N DGV F     +     LRS +  K +    G      S +   A
Sbjct: 1   MAQFTAQGRLKLLFNSDGVHF-KLLGNGFVGGLRSFQLQKGKLRYIG------SCTRQYA 60

Query: 61  SALRKSAQRVGVRGESVSGDDAILDIDYDYEFESDDLACFRGLVLDISYRPVNVVCWKRA 120
           S+L K ++   V   S+ G D+    DYD EFE+DDLACFRGLVLDISYRPVNVVCWKRA
Sbjct: 61  SSLSKKSRHFKVEA-SLYGSDSDESEDYDSEFETDDLACFRGLVLDISYRPVNVVCWKRA 120

Query: 121 ICLEFMEKADVLEYYDQTVSSPSGSFYIPAVLRVPHLLQVVKRRRIKQSLSRKNILYRDN 180
           ICLEFMEKADVLEYYDQTV+SPSGSFYIPAVLR+PHLLQVVKRRRI+Q+LSRKNIL+RDN
Sbjct: 121 ICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRIPHLLQVVKRRRIRQNLSRKNILFRDN 180

Query: 181 YTCQYCSSHESLTIDHVLPVSRGGEWTWENLVAACVKCNSKKGQKTVEEANMKLKKTPKA 240
           YTCQYCSS E+LTIDHVLP++RGGEWTWENLVAAC KCNSKKGQKT+EEANMKL K PK 
Sbjct: 181 YTCQYCSSRENLTIDHVLPIARGGEWTWENLVAACAKCNSKKGQKTIEEANMKLIKVPKV 240

Query: 241 PKDYDILAIPLTSTAIKMLKLRKGTPEEWRQYLS 275
           PKD+DILAIPLTS AI+ML++RKGTPEEWRQYL+
Sbjct: 241 PKDFDILAIPLTSAAIRMLRMRKGTPEEWRQYLA 266

The following BLAST results are available for this feature:

BLAST of Carg23329 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932702.1	4.9e-152	99.28	uncharacterized protein LOC111439170 [Cucurbita moschata] >XP_022932703.1 unchar...	[more]
XP_022152374.1	3.3e-132	88.30	uncharacterized protein LOC111020122 [Momordica charantia]	[more]
XP_008465340.1	8.2e-131	87.99	PREDICTED: uncharacterized protein LOC103502982 [Cucumis melo]	[more]
XP_004141149.1	2.2e-128	85.87	PREDICTED: uncharacterized protein LOC101207660 [Cucumis sativus] >KGN59772.1 hy...	[more]
XP_015902367.1	1.2e-105	72.89	uncharacterized protein LOC107435306 [Ziziphus jujuba]	[more]

BLAST of Carg23329 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23840.1	2.7e-88	61.48	HNH endonuclease	[more]

BLAST of Carg23329 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg23329 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CNK0\|A0A1S3CNK0_CUCME	5.4e-131	87.99	uncharacterized protein LOC103502982 OS=Cucumis melo OX=3656 GN=LOC103502982 PE=...	[more]
tr\|A0A0A0LG99\|A0A0A0LG99_CUCSA	1.5e-128	85.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G844900 PE=4 SV=1	[more]
tr\|A0A2P5EN26\|A0A2P5EN26_9ROSA	6.6e-105	71.07	HNH endonuclease OS=Trema orientalis OX=63057 GN=TorRG33x02_174010 PE=4 SV=1	[more]
tr\|A0A2P5ATV0\|A0A2P5ATV0_PARAD	1.1e-104	70.18	HNH endonuclease OS=Parasponia andersonii OX=3476 GN=PanWU01x14_300670 PE=4 SV=1	[more]
tr\|A0A067KUE0\|A0A067KUE0_JATCU	9.9e-101	71.17	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02737 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR029471	HNH_5
IPR003615	HNH_nuc

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23329-RA	Carg23329-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003615	HNH nuclease	SMART	SM00507	HNH_5	coord: 170..220 e-value: 8.6E-14 score: 61.8
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 172..223 e-value: 4.01893E-13 score: 61.3335
None	No IPR available	GENE3D	G3DSA:3.30.40.60		coord: 156..249 e-value: 1.6E-23 score: 84.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..65
None	No IPR available	PANTHER	PTHR33877	FAMILY NOT NAMED	coord: 92..275
None	No IPR available	PANTHER	PTHR33877:SF2	5-METHYLCYTOSINE-SPECIFIC RESTRICTION ENZYME A	coord: 92..275
IPR029471	HNH endonuclease 5	PFAM	PF14279	HNH_5	coord: 183..234 e-value: 4.1E-16 score: 58.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23329	Cla017186	Watermelon (97103) v1	carwmB0267
Carg23329	Csa3G844900	Cucumber (Chinese Long) v2	carcuB0302
Carg23329	MELO3C026901	Melon (DHL92) v3.5.1	carmeB0277
Carg23329	ClCG10G013230	Watermelon (Charleston Gray)	carwcgB0268
Carg23329	CSPI03G40910	Wild cucumber (PI 183967)	carcpiB0306
Carg23329	Cucsa.340650	Cucumber (Gy14) v1	carcgyB0325
Carg23329	CmaCh06G017440	Cucurbita maxima (Rimu)	carcmaB0385
Carg23329	CmoCh06G017310	Cucurbita moschata (Rifu)	carcmoB0383
Carg23329	Lsi03G012840	Bottle gourd (USVL1VR-Ls)	carlsiB249
Carg23329	Cp4.1LG08g06710	Cucurbita pepo (Zucchini)	carcpeB0389
Carg23329	CsGy3G038370	Cucumber (Gy14) v2	carcgybB0289
Carg23329	MELO3C026901.2	Melon (DHL92) v3.6.1	carmedB0289
Carg23329	CsaV3_3G043400	Cucumber (Chinese Long) v3	carcucB0305
Carg23329	Cla97C10G196040	Watermelon (97103) v2	carwmbB0283
Carg23329	Bhi11G001281	Wax gourd	carwgoB0359

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23329	Cucurbita maxima (Rimu)	carcmaB0383
Carg23329	Cucurbita pepo (Zucchini)	carcpeB0387