Cp4.1LG08g06520 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g06520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGATA transcription factor-like protein
LocationCp4.1LG08 : 170002 .. 170951 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAATACGAGCAAGACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGTATGTCATTTTAAACTCCATTGCTTTGTTTTTTTTTTTTTTTTTTTTTTTTNACCATTGTTGAGCTTCATTGAATTCAGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCACCCCACACCATCTTCTTCCGACTCGCCGTTCTCTCACTTTTCTGCAGTCCCCAGCAAGGCAAGAAGCAAGAGAAGACAGGCGCCCGCCAACACGAGTATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGTTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCAAGGAGGAGGAGGAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGATACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGAGTTATGGAGATGAGAATGATCAATGCATCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA

mRNA sequence

ATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAATACGAGCAAGACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCACCCCACACCATCTTCTTCCGACTCGCCGTTCTCTCACTTTTCTGCAGTCCCCAGCAAGGCAAGAAGCAAGAGAAGACAGGCGCCCGCCAACACGAGTATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGTTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCAAGGAGGAGGAGGAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGATACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGAGTTATGGAGATGAGAATGATCAATGCATCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA

Coding sequence (CDS)

ATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAATACGAGCAAGACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCACCCCACACCATCTTCTTCCGACTCGCCGTTCTCTCACTTTTCTGCAGTCCCCAGCAAGGCAAGAAGCAAGAGAAGACAGGCGCCCGCCAACACGAGTATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGTTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCAAGGAGGAGGAGGAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGATACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGAGTTATGGAGATGAGAATGATCAATGCATCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA

Protein sequence

MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Homology
[Close]
BLAST of Cp4.1LG08g06520 vs. Swiss-Prot
Match: GAT12_ARATH (GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 101/253 (39.92%), Postives = 134/253 (52.96%), Query Frame = 1 

Query: 28  STLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKG-SSLPLPPPQLSTHLNNPPPPPNS 87
           ++   DLC   + + ++   LEWLS  V+E LS +    L L    +S   + P P  ++
Sbjct: 65  TSFSGDLC---IPSDDLADELEWLSNIVDESLSPEDVHKLEL----ISGFKSRPDPKSDT 124

Query: 88  LSHPTPSSSDSPFSHFSAVPSKARSKRRQAPA-NTSIRPLIGQHHLDQL----NLLPSKQ 147
            S   P+SS   F+   +VP+KARSKR +A A N + R L+ +   D       +L S+Q
Sbjct: 125 GSPENPNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSSQQ 184

Query: 148 SLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGEEREKKVDMDQRDTTVKKSLGLQQ 207
              L+  ++  LL+            L  K    GG  R+K V   +             
Sbjct: 185 --HLSPPTSPPLLMAP----------LGKKQAVDGGHRRKKDVSSPE------------- 244

Query: 208 KQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSF 267
             G    RRC HC   +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA SPTFV  
Sbjct: 245 -SGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPAASPTFVLA 283

Query: 268 LHSNSHKRVMEMR 275
            HSNSH++VME+R
Sbjct: 305 KHSNSHRKVMELR 283

[Close]
BLAST of Cp4.1LG08g06520 vs. Swiss-Prot
Match: GATA1_ARATH (GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.8e-26
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 208 GRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSH 267
           GR+C HC A++TPQWR GP GPKTLCNACGVRY KSGRLVPEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 268 KRVMEMR 275
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]
BLAST of Cp4.1LG08g06520 vs. Swiss-Prot
Match: GATA5_ARATH (GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.8e-26
Identity = 106/276 (38.41%), Postives = 136/276 (49.28%), Query Frame = 1 

Query: 4   QPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDV----NLEWLSAFVEECL 63
           Q +MV V+SE   DD   L+     +  DD  SL  + + +      NLEWLS FVE+  
Sbjct: 65  QHEMVRVSSEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEWLSHFVEDSF 124

Query: 64  SAKGSSLPLPPPQLSTHLNNPPPPPNSLSHP-TPSSSDSPFSHFSAVPSKARSKRRQAPA 123
           +         P    T    P        HP T  + ++ F   S VP+KARSKR +   
Sbjct: 125 TEYSG-----PNLTGTPTEKPAWLTGDRKHPVTAVTEETCFK--SPVPAKARSKRNRNGL 184

Query: 124 NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGE 183
                  +G          PS      +SSS  +     + W + +ELL P         
Sbjct: 185 KVWS---LGSSSSSG----PSSSGSTSSSSSGPS-----SPWFSGAELLEPVVTSERPPF 244

Query: 184 EREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGV 243
            ++ K    +R      S  LQQ Q     R+CSHC  Q+TPQWR GP+G KTLCNACGV
Sbjct: 245 PKKHK----KRSAESVFSGELQQLQPQ---RKCSHCGVQKTPQWRAGPMGAKTLCNACGV 304

Query: 244 RYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMR 275
           RY KSGRL+PEYRPA SPTF S LHSN H++V+EMR
Sbjct: 305 RY-KSGRLLPEYRPACSPTFSSELHSNHHRKVIEMR 313

[Close]
BLAST of Cp4.1LG08g06520 vs. Swiss-Prot
Match: GATA9_ARATH (GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.5e-26
Identity = 70/145 (48.28%), Postives = 87/145 (60.00%), Query Frame = 1 

Query: 131 LDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGEEREKKVDM-DQR 190
           +D+ N+    ++    S SA +    +   LADS+   P K Q      R K+ D     
Sbjct: 132 IDESNVAVPAKARSKRSRSAASTWASRLLSLADSDETNPKKKQ-----RRVKEQDFAGDM 191

Query: 191 DTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPE 250
           D    +S         G GRRC HC  ++TPQWR GP+GPKTLCNACGVRY KSGRLVPE
Sbjct: 192 DVDCGES---------GGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPE 251

Query: 251 YRPANSPTFVSFLHSNSHKRVMEMR 275
           YRPA+SPTFV   HSNSH++VME+R
Sbjct: 252 YRPASSPTFVMARHSNSHRKVMELR 261

[Close]
BLAST of Cp4.1LG08g06520 vs. Swiss-Prot
Match: GATA4_ARATH (GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 1 

Query: 205 AGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHS 264
           A   RRC+HC +++TPQWR GPLGPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HS
Sbjct: 154 ADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVLTQHS 213

Query: 265 NSHKRVMEMR 275
           NSH++VME+R
Sbjct: 214 NSHRKVMELR 222

[Close]
BLAST of Cp4.1LG08g06520 vs. TrEMBL
Match: A0A0A0LD86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G843820 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.1e-103
Identity = 212/287 (73.87%), Postives = 239/287 (83.28%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQDDCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQQETASVNYKCEQDDCSNLEAEFSSTIDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPPP-QLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQ-APA 120
            KGS+LPLPPP QLST LNNPP  P+SLS   P+SS+S F+HF AVP KARSKRR+  P+
Sbjct: 61  TKGSTLPLPPPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFAHFPAVPGKARSKRRRRTPS 120

Query: 121 NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGE 180
             S+ PLI +  L QLNLL +K SLQLT+S+ D LLLQQTYWLADSELLLP KA+GG   
Sbjct: 121 KMSVLPLISRR-LRQLNLLQNKHSLQLTTST-DPLLLQQTYWLADSELLLPPKARGG--- 180

Query: 181 EREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGV 240
           EREK VDM Q +TTV+ S+  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNACGV
Sbjct: 181 EREKTVDMGQIETTVENSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGV 240

Query: 241 RYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTA 286
           RYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST+
Sbjct: 241 RYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTS 282

[Close]
BLAST of Cp4.1LG08g06520 vs. TrEMBL
Match: A5BTD3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041707 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.5e-50
Identity = 145/312 (46.47%), Postives = 179/312 (57.37%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSEYEQDD-----CSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFV 60
           MD+  + VSV+ EY Q+      CSKL    + +LDD L S Q T  EVDV+LEWLS FV
Sbjct: 322 MDFY-REVSVSGEYPQEQVPSTVCSKLGGLSAGSLDD-LFSTQNT--EVDVSLEWLSIFV 381

Query: 61  EECLSAKGSSLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQ 120
           E+CLS+ G+ LP P    S      P  P            SP  +   +P KARSKR++
Sbjct: 382 EDCLSSTGNCLPAPKNVASDSATPKPSKPLQSMQKPQQKPSSPLQNL-VIPGKARSKRKR 441

Query: 121 APA-NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQG 180
           A    TS    +  HHL+     P  Q+L +TSS  D  LLQQ YWLADSEL++P K + 
Sbjct: 442 ATTITTSFSNWV--HHLN-----PENQNLHITSS--DPPLLQQAYWLADSELIVPKKEES 501

Query: 181 GGG------------------EEREKKVDMDQRDTTVKKSLGLQQKQGA-----GSGRRC 240
                                EE E++ +  + +  V+   G +++ G      G  RRC
Sbjct: 502 SSNNNNNNNSMVKEEEEVEEEEEEEEEEEETREEVEVEVEKGNKERWGNLEGSNGQPRRC 561

Query: 241 SHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVM 284
           +HC AQRTPQWR GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+ HSNSHK+VM
Sbjct: 562 THCLAQRTPQWRAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYKHSNSHKKVM 618

[Close]
BLAST of Cp4.1LG08g06520 vs. TrEMBL
Match: F6HLA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07550 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.5e-50
Identity = 145/312 (46.47%), Postives = 179/312 (57.37%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSEYEQDD-----CSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFV 60
           MD+  + VSV+ EY Q+      CSKL    + +LDD L S Q T  EVDV+LEWLS FV
Sbjct: 1   MDFY-REVSVSGEYPQEQVPSTVCSKLGGLSAGSLDD-LFSTQNT--EVDVSLEWLSIFV 60

Query: 61  EECLSAKGSSLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQ 120
           E+CLS+ G+ LP P    S      P  P            SP  +   +P KARSKR++
Sbjct: 61  EDCLSSTGNCLPAPKNVASDSATPKPSKPLQSMQKPQQKPSSPLQNL-VIPGKARSKRKR 120

Query: 121 APA-NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQG 180
           A    TS    +  HHL+     P  Q+L +TSS  D  LLQQ YWLADSEL++P K + 
Sbjct: 121 ATTITTSFSNWV--HHLN-----PENQNLHITSS--DPPLLQQAYWLADSELIVPKKEES 180

Query: 181 GGG------------------EEREKKVDMDQRDTTVKKSLGLQQKQGA-----GSGRRC 240
                                EE E++ +  + +  V+   G +++ G      G  RRC
Sbjct: 181 SSNNNNNNNSMVKEEEEVEEEEEEEEEEEETREEVEVEVEKGNKERWGNLEGSNGQPRRC 240

Query: 241 SHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVM 284
           +HC AQRTPQWR GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+ HSNSHK+VM
Sbjct: 241 THCLAQRTPQWRAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYKHSNSHKKVM 297

[Close]
BLAST of Cp4.1LG08g06520 vs. TrEMBL
Match: A0A067KXQ6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02738 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.8e-49
Identity = 133/270 (49.26%), Postives = 163/270 (60.37%), Query Frame = 1 

Query: 32  DDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPPPQLSTHLNNPPPPPNSLS--- 91
           DDL S Q T  EVDV+LEWLS FVE+CLS+KG+ LP P        N  PP   S+    
Sbjct: 40  DDLFSAQNT--EVDVSLEWLSVFVEDCLSSKGNCLPPP-------TNTTPPAEVSVKKQE 99

Query: 92  --HPTPSSSDSPFSHFSAVPSKARSKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLT 151
                P S+++    F  +P KARSKR++     +  PL    + +QL          L 
Sbjct: 100 KPQHNPQSNNNSLEKF-VIPGKARSKRKRVTGVKTRNPLSSWSYCNQLT---------LN 159

Query: 152 SSSADTLLLQQTYWLADSELLLPHK------AQGGGGEEREKKVDMDQRDTTVKKSLGLQ 211
             S+D  LLQQ YWLADSEL++P K             + E   +++Q     K+SL + 
Sbjct: 160 FPSSDPPLLQQAYWLADSELIMPKKDTTTTTTTTTKARDSELDENLEQEKVVAKESLRIL 219

Query: 212 QKQGA--GSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTF 271
           +         RRCSHC AQRTPQWR GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTF
Sbjct: 220 ENSNGQQQQPRRCSHCLAQRTPQWRAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTF 279

Query: 272 VSFLHSNSHKRVMEMRMINASSSTSTAFSS 289
           VS+LHSNSHK+VMEMRM  A+SST+T F+S
Sbjct: 280 VSYLHSNSHKKVMEMRM--ATSSTTTVFNS 287

[Close]
BLAST of Cp4.1LG08g06520 vs. TrEMBL
Match: A0A061F2V5_THECC (GATA transcription factor 9, putative OS=Theobroma cacao GN=TCM_026451 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-48
Identity = 145/303 (47.85%), Postives = 176/303 (58.09%), Query Frame = 1 

Query: 8   VSVNSEYEQDD-----CSKLKSELSSTLD-DDLCSLQMTTMEVDVNLEWLSAFVEECLSA 67
           VSV+ EY Q+      CSKL + L++T   DDL   Q T  EVD +LEWLS FVE+CLS+
Sbjct: 7   VSVSGEYHQEQVLSSPCSKLGATLATTGTLDDLFPAQNT--EVDKSLEWLSIFVEDCLSS 66

Query: 68  KGSSLPLPPPQLSTHLNN-----PPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQA 127
            G+ +P+     +T++ N        P  SL    P     P      VP KARSKR++ 
Sbjct: 67  TGNCIPV---AATTNVQNKSTTTATKPAQSLQQ-KPQQIIPPSLQKFVVPGKARSKRKRV 126

Query: 128 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHK----- 187
            A T  +  +         L    Q+L L SS  D  LLQQ YWLADSEL++P K     
Sbjct: 127 AATTLSKTKMNPFTSWSYQLNSHNQNLHLASS--DPPLLQQAYWLADSELIVPKKEDDSN 186

Query: 188 -----AQGGGGEEREKKVDMDQRDTTV--KKSLGLQQ----KQGAGSGRRCSHCQAQRTP 247
                 +G    E  KK +M+   T V  K+SLG  +    +Q     RRC+HC AQRTP
Sbjct: 187 NSSSNMRGNSETEESKKEEMEGEKTVVVCKESLGSLEGNSGQQQQQQPRRCTHCLAQRTP 246

Query: 248 QWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASS 284
           QWR GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+LHSNSHK+VMEMRM   SS
Sbjct: 247 QWRAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMALLSS 300

[Close]
BLAST of Cp4.1LG08g06520 vs. TAIR10
Match: AT5G25830.1 (AT5G25830.1 GATA transcription factor 12)

HSP 1 Score: 128.3 bits (321), Expect = 7.9e-30
Identity = 101/253 (39.92%), Postives = 134/253 (52.96%), Query Frame = 1 

Query: 28  STLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKG-SSLPLPPPQLSTHLNNPPPPPNS 87
           ++   DLC   + + ++   LEWLS  V+E LS +    L L    +S   + P P  ++
Sbjct: 65  TSFSGDLC---IPSDDLADELEWLSNIVDESLSPEDVHKLEL----ISGFKSRPDPKSDT 124

Query: 88  LSHPTPSSSDSPFSHFSAVPSKARSKRRQAPA-NTSIRPLIGQHHLDQL----NLLPSKQ 147
            S   P+SS   F+   +VP+KARSKR +A A N + R L+ +   D       +L S+Q
Sbjct: 125 GSPENPNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSSQQ 184

Query: 148 SLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGEEREKKVDMDQRDTTVKKSLGLQQ 207
              L+  ++  LL+            L  K    GG  R+K V   +             
Sbjct: 185 --HLSPPTSPPLLMAP----------LGKKQAVDGGHRRKKDVSSPE------------- 244

Query: 208 KQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSF 267
             G    RRC HC   +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA SPTFV  
Sbjct: 245 -SGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPAASPTFVLA 283

Query: 268 LHSNSHKRVMEMR 275
            HSNSH++VME+R
Sbjct: 305 KHSNSHRKVMELR 283

[Close]
BLAST of Cp4.1LG08g06520 vs. TAIR10
Match: AT3G24050.1 (AT3G24050.1 GATA transcription factor 1)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-27
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 208 GRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSH 267
           GR+C HC A++TPQWR GP GPKTLCNACGVRY KSGRLVPEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 268 KRVMEMR 275
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]
BLAST of Cp4.1LG08g06520 vs. TAIR10
Match: AT5G66320.1 (AT5G66320.1 GATA transcription factor 5)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-27
Identity = 106/276 (38.41%), Postives = 136/276 (49.28%), Query Frame = 1 

Query: 4   QPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDV----NLEWLSAFVEECL 63
           Q +MV V+SE   DD   L+     +  DD  SL  + + +      NLEWLS FVE+  
Sbjct: 65  QHEMVRVSSEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEWLSHFVEDSF 124

Query: 64  SAKGSSLPLPPPQLSTHLNNPPPPPNSLSHP-TPSSSDSPFSHFSAVPSKARSKRRQAPA 123
           +         P    T    P        HP T  + ++ F   S VP+KARSKR +   
Sbjct: 125 TEYSG-----PNLTGTPTEKPAWLTGDRKHPVTAVTEETCFK--SPVPAKARSKRNRNGL 184

Query: 124 NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGE 183
                  +G          PS      +SSS  +     + W + +ELL P         
Sbjct: 185 KVWS---LGSSSSSG----PSSSGSTSSSSSGPS-----SPWFSGAELLEPVVTSERPPF 244

Query: 184 EREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGV 243
            ++ K    +R      S  LQQ Q     R+CSHC  Q+TPQWR GP+G KTLCNACGV
Sbjct: 245 PKKHK----KRSAESVFSGELQQLQPQ---RKCSHCGVQKTPQWRAGPMGAKTLCNACGV 304

Query: 244 RYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMR 275
           RY KSGRL+PEYRPA SPTF S LHSN H++V+EMR
Sbjct: 305 RY-KSGRLLPEYRPACSPTFSSELHSNHHRKVIEMR 313

[Close]
BLAST of Cp4.1LG08g06520 vs. TAIR10
Match: AT4G32890.1 (AT4G32890.1 GATA transcription factor 9)

HSP 1 Score: 119.4 bits (298), Expect = 3.7e-27
Identity = 70/145 (48.28%), Postives = 87/145 (60.00%), Query Frame = 1 

Query: 131 LDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGEEREKKVDM-DQR 190
           +D+ N+    ++    S SA +    +   LADS+   P K Q      R K+ D     
Sbjct: 132 IDESNVAVPAKARSKRSRSAASTWASRLLSLADSDETNPKKKQ-----RRVKEQDFAGDM 191

Query: 191 DTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPE 250
           D    +S         G GRRC HC  ++TPQWR GP+GPKTLCNACGVRY KSGRLVPE
Sbjct: 192 DVDCGES---------GGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPE 251

Query: 251 YRPANSPTFVSFLHSNSHKRVMEMR 275
           YRPA+SPTFV   HSNSH++VME+R
Sbjct: 252 YRPASSPTFVMARHSNSHRKVMELR 261

[Close]
BLAST of Cp4.1LG08g06520 vs. TAIR10
Match: AT3G60530.1 (AT3G60530.1 GATA transcription factor 4)

HSP 1 Score: 118.2 bits (295), Expect = 8.2e-27
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 1 

Query: 205 AGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHS 264
           A   RRC+HC +++TPQWR GPLGPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HS
Sbjct: 154 ADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVLTQHS 213

Query: 265 NSHKRVMEMR 275
           NSH++VME+R
Sbjct: 214 NSHRKVMELR 222

[Close]
BLAST of Cp4.1LG08g06520 vs. NCBI nr
Match: gi|449446764|ref|XP_004141141.1| (PREDICTED: GATA transcription factor 9-like [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 3.0e-103
Identity = 212/287 (73.87%), Postives = 239/287 (83.28%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQDDCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQQETASVNYKCEQDDCSNLEAEFSSTIDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPPP-QLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQ-APA 120
            KGS+LPLPPP QLST LNNPP  P+SLS   P+SS+S F+HF AVP KARSKRR+  P+
Sbjct: 61  TKGSTLPLPPPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFAHFPAVPGKARSKRRRRTPS 120

Query: 121 NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGGE 180
             S+ PLI +  L QLNLL +K SLQLT+S+ D LLLQQTYWLADSELLLP KA+GG   
Sbjct: 121 KMSVLPLISRR-LRQLNLLQNKHSLQLTTST-DPLLLQQTYWLADSELLLPPKARGG--- 180

Query: 181 EREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGV 240
           EREK VDM Q +TTV+ S+  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNACGV
Sbjct: 181 EREKTVDMGQIETTVENSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACGV 240

Query: 241 RYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTA 286
           RYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST+
Sbjct: 241 RYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTS 282

[Close]
BLAST of Cp4.1LG08g06520 vs. NCBI nr
Match: gi|659130742|ref|XP_008465326.1| (PREDICTED: GATA transcription factor 12-like [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 4.0e-100
Identity = 213/287 (74.22%), Postives = 237/287 (82.58%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQDDCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQTETASVNYKCEQDDCSNLEAEFSSTVDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPPP-QLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQ-APA 120
            KGS+ PLPPP QLST LNNPP  P+SLS   P+SS+S F+HF AVP KARSKRR+  P+
Sbjct: 61  TKGSTHPLPPPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFTHFPAVPGKARSKRRRRTPS 120

Query: 121 NT-SIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQGGGG 180
           N  S+ PLI +  L QLNLL +K SLQLTSS+ D LLLQQTYWLADSELLLP +A+GG  
Sbjct: 121 NKMSVLPLISRR-LRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPEARGG-- 180

Query: 181 EEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACG 240
            EREK VDM Q  TTV+KS+  QQ QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNACG
Sbjct: 181 -EREKTVDMGQIKTTVEKSVKKQQ-QGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACG 240

Query: 241 VRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTST 285
           VRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST
Sbjct: 241 VRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTST 281

[Close]
BLAST of Cp4.1LG08g06520 vs. NCBI nr
Match: gi|297739745|emb|CBI29927.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 206.8 bits (525), Expect = 5.0e-50
Identity = 142/290 (48.97%), Postives = 174/290 (60.00%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSEYEQDD-----CSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFV 60
           MD+  + VSV+ EY Q+      CSKL    + +LDD L S Q T  EVDV+LEWLS FV
Sbjct: 1   MDFY-REVSVSGEYPQEQVPSTVCSKLGGLSAGSLDD-LFSTQNT--EVDVSLEWLSIFV 60

Query: 61  EECLSAKGSSLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQ 120
           E+CLS+ G+ LP P    S      P  P            SP  +   +P KARSKR++
Sbjct: 61  EDCLSSTGNCLPAPKNVASDSATPKPSKPLQSMQKPQQKPSSPLQNL-VIPGKARSKRKR 120

Query: 121 APA-NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQG 180
           A    TS    +  HHL+     P  Q+L +TSS  D  LLQQ YWLADSEL++P     
Sbjct: 121 ATTITTSFSNWV--HHLN-----PENQNLHITSS--DPPLLQQAYWLADSELIVP----- 180

Query: 181 GGGEEREKKVDMDQRDTTVKKSLGLQQKQGA-GSGRRCSHCQAQRTPQWRGGPLGPKTLC 240
                  KK +    +     S+  ++++G+ G  RRC+HC AQRTPQWR GPLGPKTLC
Sbjct: 181 -------KKEESSSNNNNNNNSMVKEEEEGSNGQPRRCTHCLAQRTPQWRAGPLGPKTLC 240

Query: 241 NACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTS 284
           NACGVRY KSGRL+PEYRPA SPTFVS+ HSNSHK+VMEMRM   SS  S
Sbjct: 241 NACGVRY-KSGRLLPEYRPAKSPTFVSYKHSNSHKKVMEMRMAVLSSIPS 263

[Close]
BLAST of Cp4.1LG08g06520 vs. NCBI nr
Match: gi|1009167892|ref|XP_015902364.1| (PREDICTED: GATA transcription factor 9-like [Ziziphus jujuba])

HSP 1 Score: 206.8 bits (525), Expect = 5.0e-50
Identity = 153/299 (51.17%), Postives = 182/299 (60.87%), Query Frame = 1 

Query: 8   VSVNSEYEQDD-----CSKLKS-ELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSA 67
           VSV  E++Q+      CSKL     ++T  DDL S Q T  E DVNLEWLS FVE+CLS+
Sbjct: 7   VSVAGEHQQEQVISPPCSKLSGLSTAATGLDDLFSAQNT--EADVNLEWLSIFVEDCLSS 66

Query: 68  KGSSLPLPPPQLSTHLNNPP-----PPPNSL---SHPTPSSSDSPFSHFSAVPSKARSKR 127
           KG+ LP PP  + T    P      P P  L   S   P+SS S   +  AVP KARSKR
Sbjct: 67  KGNCLP-PPTNIETTSTTPKSSKALPLPLHLQKKSQQNPTSSSSSLQNL-AVPGKARSKR 126

Query: 128 RQA--PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHK 187
           ++A  P N +  PL    +    NL+   Q+LQ+ SS  D  LL+Q YWLADSEL +P K
Sbjct: 127 KRAVVPKNRT-NPLTSWSN----NLILQGQTLQIPSS--DPPLLKQAYWLADSELFVPKK 186

Query: 188 AQGGG------GEEREKKVDMDQRDTTVKKSLGLQQKQGAGS-GRRCSHCQAQRTPQWRG 247
            +          E  E++ D DQ+   V K   L+   G     RRC+HC AQRTPQWR 
Sbjct: 187 DENSSLRSDEHEETGEEEADEDQKRIMVSKE-NLECNNGQQPMPRRCTHCLAQRTPQWRA 246

Query: 248 GPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTS 284
           GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+LHSNSHK+VMEMRM   SS  S
Sbjct: 247 GPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMSLLSSIPS 292

[Close]
BLAST of Cp4.1LG08g06520 vs. NCBI nr
Match: gi|147860323|emb|CAN83570.1| (hypothetical protein VITISV_041707 [Vitis vinifera])

HSP 1 Score: 206.5 bits (524), Expect = 6.5e-50
Identity = 145/312 (46.47%), Postives = 179/312 (57.37%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSEYEQDD-----CSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFV 60
           MD+  + VSV+ EY Q+      CSKL    + +LDD L S Q T  EVDV+LEWLS FV
Sbjct: 322 MDFY-REVSVSGEYPQEQVPSTVCSKLGGLSAGSLDD-LFSTQNT--EVDVSLEWLSIFV 381

Query: 61  EECLSAKGSSLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRRQ 120
           E+CLS+ G+ LP P    S      P  P            SP  +   +P KARSKR++
Sbjct: 382 EDCLSSTGNCLPAPKNVASDSATPKPSKPLQSMQKPQQKPSSPLQNL-VIPGKARSKRKR 441

Query: 121 APA-NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQG 180
           A    TS    +  HHL+     P  Q+L +TSS  D  LLQQ YWLADSEL++P K + 
Sbjct: 442 ATTITTSFSNWV--HHLN-----PENQNLHITSS--DPPLLQQAYWLADSELIVPKKEES 501

Query: 181 GGG------------------EEREKKVDMDQRDTTVKKSLGLQQKQGA-----GSGRRC 240
                                EE E++ +  + +  V+   G +++ G      G  RRC
Sbjct: 502 SSNNNNNNNSMVKEEEEVEEEEEEEEEEEETREEVEVEVEKGNKERWGNLEGSNGQPRRC 561

Query: 241 SHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVM 284
           +HC AQRTPQWR GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+ HSNSHK+VM
Sbjct: 562 THCLAQRTPQWRAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYKHSNSHKKVM 618

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g06520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GAT12_ARATH1.4e-2839.92GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1[more]
GATA1_ARATH3.8e-2677.61GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2[more]
GATA5_ARATH3.8e-2638.41GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1[more]
GATA9_ARATH6.5e-2648.28GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1[more]
GATA4_ARATH1.4e-2575.71GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1[more]
BLAST of Cp4.1LG08g06520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LD86_CUCSA2.1e-10373.87Uncharacterized protein OS=Cucumis sativus GN=Csa_3G843820 PE=4 SV=1[more]
A5BTD3_VITVI4.5e-5046.47Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041707 PE=4 SV=1[more]
F6HLA6_VITVI4.5e-5046.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07550 PE=4 SV=... [more]
A0A067KXQ6_JATCU3.8e-4949.26Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02738 PE=4 SV=1[more]
A0A061F2V5_THECC1.4e-4847.85GATA transcription factor 9, putative OS=Theobroma cacao GN=TCM_026451 PE=4 SV=1[more]
BLAST of Cp4.1LG08g06520 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25830.17.9e-3039.92 GATA transcription factor 12[more]
AT3G24050.12.1e-2777.61 GATA transcription factor 1[more]
AT5G66320.12.1e-2738.41 GATA transcription factor 5[more]
AT4G32890.13.7e-2748.28 GATA transcription factor 9[more]
AT3G60530.18.2e-2775.71 GATA transcription factor 4[more]
BLAST of Cp4.1LG08g06520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446764|ref|XP_004141141.1|3.0e-10373.87PREDICTED: GATA transcription factor 9-like [Cucumis sativus][more]
gi|659130742|ref|XP_008465326.1|4.0e-10074.22PREDICTED: GATA transcription factor 12-like [Cucumis melo][more]
gi|297739745|emb|CBI29927.3|5.0e-5048.97unnamed protein product [Vitis vinifera][more]
gi|1009167892|ref|XP_015902364.1|5.0e-5051.17PREDICTED: GATA transcription factor 9-like [Ziziphus jujuba][more]
gi|147860323|emb|CAN83570.1|6.5e-5046.47hypothetical protein VITISV_041707 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR013088Znf_NHR/GATA
IPR000679Znf_GATA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g06520.1Cp4.1LG08g06520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 211..245
score: 9.6
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 205..256
score: 1.2
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 211..236
scor
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 205..248
score: 12
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 208..246
score: 2.6
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 24..119
score: 8.2E-71coord: 137..275
score: 8.2
NoneNo IPR availablePANTHERPTHR10071:SF161SUBFAMILY NOT NAMEDcoord: 137..275
score: 8.2E-71coord: 24..119
score: 8.2
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 207..270
score: 2.28

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g06520Cucsa.340570Cucumber (Gy14) v1cgycpeB0902
Cp4.1LG08g06520CmaCh06G017330Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g06520CmoCh06G017200Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g06520Cla017176Watermelon (97103) v1cpewmB831
Cp4.1LG08g06520Csa3G843820Cucumber (Chinese Long) v2cpecuB865
Cp4.1LG08g06520MELO3C026892Melon (DHL92) v3.5.1cpemeB798
Cp4.1LG08g06520ClCG10G013320Watermelon (Charleston Gray)cpewcgB769
Cp4.1LG08g06520CSPI03G40820Wild cucumber (PI 183967)cpecpiB867
Cp4.1LG08g06520Lsi03G012950Bottle gourd (USVL1VR-Ls)cpelsiB709
Cp4.1LG08g06520MELO3C026892.2Melon (DHL92) v3.6.1cpemedB939
Cp4.1LG08g06520CsaV3_3G043310Cucumber (Chinese Long) v3cpecucB1061
Cp4.1LG08g06520Bhi11G001292Wax gourdcpewgoB1077
Cp4.1LG08g06520Carg15407Silver-seed gourdcarcpeB0974
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g06520Cucurbita pepo (Zucchini)cpecpeB490
Cp4.1LG08g06520Cucurbita maxima (Rimu)cmacpeB293
Cp4.1LG08g06520Cucumber (Gy14) v2cgybcpeB458