CmoCh06G017200 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G017200
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionGATA transcription factor 9
LocationCmo_Chr06 : 11818161 .. 11819605 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTGTTGCTACCATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAAAACGAGCAAGACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGTATGTCATTTGAAACTCCATTGCTTTGTTTTTTTGCCTTGTTGTTCTCATCACGCCAATGTTGAGCTTCATTGAATTCAGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCGCCCCACACCATCTTCTTCCGACTCGCCGTTCTCCCACTTTTCTGCAGTCCCCAGCAAGGCTAGAAGCAAAAGAAGACAGGCGCCCGCCAACACGAGCATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGTTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCGAGGAGGAGGAGAAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGACACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGGGTTATGGAGATGAGAATGATCAATGCCTCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAAAACCTACACTACCGGCCAACCATGCTAGAAGCTGCAACTATTTGGTTCTTCAATGTAAACCACAACTACCCTTTCCCCTTTCCTTTCTACATTAGAGTAATGAACTCTCGAGTACAAAAAGACGAGCATCTTTCTATTTCTCAGAGGTTTTACCAGAGATGAATTTAGTTTTTAAGACCATCCGGGTATCAATTACTACTTGGACTATGTTAGTTACTGCAATAGCCTCCTAAGCCCACCGCTAGCAGATTTCGTTCTTTTTGGGATTTTCTTTCTGGGTTTCCCTTCAAAGTTTTAAAATGCGTTTGTAAGGGAGAGATTTCCACCCTCTTATAAAGAATGCTTTGTTCGTTCCTCTCTCCAACCAATGTGGGATCACGTAGCTTCATTTCTTTATGGTATTCAATCAAGATGGATTCATTTCGTTGGTAGAAAATGGTTACATCCATTACAACTTTTCATATGCTCTATTCCAT

mRNA sequence

GCTGTTGCTACCATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAAAACGAGCAAGACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCGCCCCACACCATCTTCTTCCGACTCGCCGTTCTCCCACTTTTCTGCAGTCCCCAGCAAGGCTAGAAGCAAAAGAAGACAGGCGCCCGCCAACACGAGCATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGTTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCGAGGAGGAGGAGAAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGACACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGGGTTATGGAGATGAGAATGATCAATGCCTCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAAAACCTACACTACCGGCCAACCATGCTAGAAGCTGCAACTATTTGGTTCTTCAATGTAAACCACAACTACCCTTTCCCCTTTCCTTTCTACATTAGAGTAATGAACTCTCGAGTACAAAAAGACGAGCATCTTTCTATTTCTCAGAGGTTTTACCAGAGATGAATTTAGTTTTTAAGACCATCCGGGTATCAATTACTACTTGGACTATGTTAGTTACTGCAATAGCCTCCTAAGCCCACCGCTAGCAGATTTCGTTCTTTTTGGGATTTTCTTTCTGGGTTTCCCTTCAAAGTTTTAAAATGCGTTTGTAAGGGAGAGATTTCCACCCTCTTATAAAGAATGCTTTGTTCGTTCCTCTCTCCAACCAATGTGGGATCACGTAGCTTCATTTCTTTATGGTATTCAATCAAGATGGATTCATTTCGTTGGTAGAAAATGGTTACATCCATTACAACTTTTCATATGCTCTATTCCAT

Coding sequence (CDS)

ATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAAAACGAGCAAGACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCGCCCCACACCATCTTCTTCCGACTCGCCGTTCTCCCACTTTTCTGCAGTCCCCAGCAAGGCTAGAAGCAAAAGAAGACAGGCGCCCGCCAACACGAGCATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGTTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCGAGGAGGAGGAGAAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGACACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGGGTTATGGAGATGAGAATGATCAATGCCTCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA
Homology
[Close]
BLAST of CmoCh06G017200 vs. Swiss-Prot
Match: GAT12_ARATH (GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-26
Identity = 99/255 (38.82%), Postives = 132/255 (51.76%), Query Frame = 1 

Query: 28  STLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPLPPPQLSTHLNNPPPPPN 87
           ++   DLC   + + ++   LEWLS  V+E LS      P  +   +L +   + P P +
Sbjct: 65  TSFSGDLC---IPSDDLADELEWLSNIVDESLS------PEDVHKLELISGFKSRPDPKS 124

Query: 88  SLSRPTPSSSDSP-FSHFSAVPSKARSKRRQAPA-NTSIRPLIGQHHLDQL----NLLPS 147
               P   +S SP F+   +VP+KARSKR +A A N + R L+ +   D       +L S
Sbjct: 125 DTGSPENPNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSS 184

Query: 148 KQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSLGL 207
           +Q   L+  ++  LL+            L  K    G   R+K V   +           
Sbjct: 185 QQ--HLSPPTSPPLLMAP----------LGKKQAVDGGHRRKKDVSSPE----------- 244

Query: 208 QQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFV 267
               G    RRC HC   +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA SPTFV
Sbjct: 245 ---SGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPAASPTFV 283

Query: 268 SFLHSNSHKRVMEMR 277
              HSNSH++VME+R
Sbjct: 305 LAKHSNSHRKVMELR 283

[Close]
BLAST of CmoCh06G017200 vs. Swiss-Prot
Match: GATA1_ARATH (GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.8e-26
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 210 GRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSH 269
           GR+C HC A++TPQWR GP GPKTLCNACGVRY KSGRLVPEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 270 KRVMEMR 277
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]
BLAST of CmoCh06G017200 vs. Swiss-Prot
Match: GATA9_ARATH (GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.6e-26
Identity = 68/145 (46.90%), Postives = 89/145 (61.38%), Query Frame = 1 

Query: 133 LDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKA-RGGGEEEREKKVDMDQR 192
           +D+ N+    ++    S SA +    +   LADS+   P K  R   E++    +D+D  
Sbjct: 132 IDESNVAVPAKARSKRSRSAASTWASRLLSLADSDETNPKKKQRRVKEQDFAGDMDVDCG 191

Query: 193 DTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPE 252
           ++              G GRRC HC  ++TPQWR GP+GPKTLCNACGVRY KSGRLVPE
Sbjct: 192 ES--------------GGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPE 251

Query: 253 YRPANSPTFVSFLHSNSHKRVMEMR 277
           YRPA+SPTFV   HSNSH++VME+R
Sbjct: 252 YRPASSPTFVMARHSNSHRKVMELR 261

[Close]
BLAST of CmoCh06G017200 vs. Swiss-Prot
Match: GATA4_ARATH (GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 1 

Query: 207 AGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHS 266
           A   RRC+HC +++TPQWR GPLGPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HS
Sbjct: 154 ADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVLTQHS 213

Query: 267 NSHKRVMEMR 277
           NSH++VME+R
Sbjct: 214 NSHRKVMELR 222

[Close]
BLAST of CmoCh06G017200 vs. Swiss-Prot
Match: GATA5_ARATH (GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.5e-25
Identity = 105/278 (37.77%), Postives = 135/278 (48.56%), Query Frame = 1 

Query: 4   QPKMVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDV----NLEWLSAFVEECL 63
           Q +MV V+SE   DD   L+     +  DD  SL  + + +      NLEWLS FVE+  
Sbjct: 65  QHEMVRVSSEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEWLSHFVEDSF 124

Query: 64  SAKGSSLPLPLPPPQLSTHLNNPPPPPNSLSRP-TPSSSDSPFSHFSAVPSKARSKRRQA 123
           +           P    T    P         P T  + ++ F   S VP+KARSKR + 
Sbjct: 125 TEYSG-------PNLTGTPTEKPAWLTGDRKHPVTAVTEETCFK--SPVPAKARSKRNRN 184

Query: 124 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 183
                    +G          PS      +SSS  +     + W + +ELL P       
Sbjct: 185 GLKVWS---LGSSSSSG----PSSSGSTSSSSSGPS-----SPWFSGAELLEPVVTSERP 244

Query: 184 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 243
              ++ K    +R      S  LQQ Q     R+CSHC  Q+TPQWR GP+G KTLCNAC
Sbjct: 245 PFPKKHK----KRSAESVFSGELQQLQPQ---RKCSHCGVQKTPQWRAGPMGAKTLCNAC 304

Query: 244 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMR 277
           GVRY KSGRL+PEYRPA SPTF S LHSN H++V+EMR
Sbjct: 305 GVRY-KSGRLLPEYRPACSPTFSSELHSNHHRKVIEMR 313

[Close]
BLAST of CmoCh06G017200 vs. TrEMBL
Match: A0A0A0LD86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G843820 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 3.5e-103
Identity = 213/288 (73.96%), Postives = 240/288 (83.33%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQDDCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQQETASVNYKCEQDDCSNLEAEFSSTIDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKRRQ-AP 120
            KGS+LPLP PP QLST LNNPP  P+SLS+  P+SS+S F+HF AVP KARSKRR+  P
Sbjct: 61  TKGSTLPLP-PPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFAHFPAVPGKARSKRRRRTP 120

Query: 121 ANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGE 180
           +  S+ PLI +  L QLNLL +K SLQLT+S+ D LLLQQTYWLADSELLLP KARGG  
Sbjct: 121 SKMSVLPLISRR-LRQLNLLQNKHSLQLTTST-DPLLLQQTYWLADSELLLPPKARGG-- 180

Query: 181 EEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACG 240
            EREK VDM Q +TTV+ S+  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNACG
Sbjct: 181 -EREKTVDMGQIETTVENSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACG 240

Query: 241 VRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTA 288
           VRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST+
Sbjct: 241 VRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTS 282

[Close]
BLAST of CmoCh06G017200 vs. TrEMBL
Match: A0A067KXQ6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02738 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.5e-50
Identity = 134/270 (49.63%), Postives = 168/270 (62.22%), Query Frame = 1 

Query: 32  DDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPL---PPPQLSTHLNNPPPPPNS 91
           DDL S Q T  EVDV+LEWLS FVE+CLS+KG+ LP P    PP ++S      P     
Sbjct: 40  DDLFSAQNT--EVDVSLEWLSVFVEDCLSSKGNCLPPPTNTTPPAEVSVKKQEKP----- 99

Query: 92  LSRPTPSSSDSPFSHFSAVPSKARSKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLT 151
             +  P S+++    F  +P KARSKR++     +  PL    + +QL L          
Sbjct: 100 --QHNPQSNNNSLEKF-VIPGKARSKRKRVTGVKTRNPLSSWSYCNQLTL---------N 159

Query: 152 SSSADTLLLQQTYWLADSELLLPHK----ARGGGEEEREKKVD--MDQRDTTVKKSLGLQ 211
             S+D  LLQQ YWLADSEL++P K          + R+ ++D  ++Q     K+SL + 
Sbjct: 160 FPSSDPPLLQQAYWLADSELIMPKKDTTTTTTTTTKARDSELDENLEQEKVVAKESLRIL 219

Query: 212 QKQGAGSG--RRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTF 271
           +         RRCSHC AQRTPQWR GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTF
Sbjct: 220 ENSNGQQQQPRRCSHCLAQRTPQWRAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTF 279

Query: 272 VSFLHSNSHKRVMEMRMINASSSTSTAFSS 291
           VS+LHSNSHK+VMEMRM  A+SST+T F+S
Sbjct: 280 VSYLHSNSHKKVMEMRM--ATSSTTTVFNS 287

[Close]
BLAST of CmoCh06G017200 vs. TrEMBL
Match: A0A061F2V5_THECC (GATA transcription factor 9, putative OS=Theobroma cacao GN=TCM_026451 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.9e-48
Identity = 144/300 (48.00%), Postives = 173/300 (57.67%), Query Frame = 1 

Query: 8   VSVNSENEQDD-----CSKLKSELSSTLD-DDLCSLQMTTMEVDVNLEWLSAFVEECLSA 67
           VSV+ E  Q+      CSKL + L++T   DDL   Q T  EVD +LEWLS FVE+CLS+
Sbjct: 7   VSVSGEYHQEQVLSSPCSKLGATLATTGTLDDLFPAQNT--EVDKSLEWLSIFVEDCLSS 66

Query: 68  KGSSLPLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKRRQAPAN 127
            G+ +P+       +        P  SL +  P     P      VP KARSKR++  A 
Sbjct: 67  TGNCIPVAATTNVQNKSTTTATKPAQSLQQ-KPQQIIPPSLQKFVVPGKARSKRKRVAAT 126

Query: 128 TSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHK-------- 187
           T  +  +         L    Q+L L SS  D  LLQQ YWLADSEL++P K        
Sbjct: 127 TLSKTKMNPFTSWSYQLNSHNQNLHLASS--DPPLLQQAYWLADSELIVPKKEDDSNNSS 186

Query: 188 --ARGGGEEEREKKVDMDQRDTTV--KKSLGLQQ----KQGAGSGRRCSHCQAQRTPQWR 247
              RG  E E  KK +M+   T V  K+SLG  +    +Q     RRC+HC AQRTPQWR
Sbjct: 187 SNMRGNSETEESKKEEMEGEKTVVVCKESLGSLEGNSGQQQQQQPRRCTHCLAQRTPQWR 246

Query: 248 GGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTS 286
            GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+LHSNSHK+VMEMRM   SS  S
Sbjct: 247 AGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMALLSSIPS 300

[Close]
BLAST of CmoCh06G017200 vs. TrEMBL
Match: F6HLA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07550 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.5e-48
Identity = 148/314 (47.13%), Postives = 183/314 (58.28%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSENEQDD-----CSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFV 60
           MD+  + VSV+ E  Q+      CSKL    + +LDD L S Q T  EVDV+LEWLS FV
Sbjct: 1   MDFY-REVSVSGEYPQEQVPSTVCSKLGGLSAGSLDD-LFSTQNT--EVDVSLEWLSIFV 60

Query: 61  EECLSAKGSSLPLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKR 120
           E+CLS+ G+ LP P      S     P  P  S+ +P    S SP  +   +P KARSKR
Sbjct: 61  EDCLSSTGNCLPAPKNVASDSA-TPKPSKPLQSMQKPQQKPS-SPLQNL-VIPGKARSKR 120

Query: 121 RQAPA-NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKA 180
           ++A    TS    +  HHL+     P  Q+L +TSS  D  LLQQ YWLADSEL++P K 
Sbjct: 121 KRATTITTSFSNWV--HHLN-----PENQNLHITSS--DPPLLQQAYWLADSELIVPKKE 180

Query: 181 RGGG------------------EEEREKKVDMDQRDTTVKKSLGLQQKQGA-----GSGR 240
                                 EEE E++ +  + +  V+   G +++ G      G  R
Sbjct: 181 ESSSNNNNNNNSMVKEEEEVEEEEEEEEEEEETREEVEVEVEKGNKERWGNLEGSNGQPR 240

Query: 241 RCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKR 286
           RC+HC AQRTPQWR GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+ HSNSHK+
Sbjct: 241 RCTHCLAQRTPQWRAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYKHSNSHKK 297

[Close]
BLAST of CmoCh06G017200 vs. TrEMBL
Match: A5BTD3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041707 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.5e-48
Identity = 148/314 (47.13%), Postives = 183/314 (58.28%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSENEQDD-----CSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFV 60
           MD+  + VSV+ E  Q+      CSKL    + +LDD L S Q T  EVDV+LEWLS FV
Sbjct: 322 MDFY-REVSVSGEYPQEQVPSTVCSKLGGLSAGSLDD-LFSTQNT--EVDVSLEWLSIFV 381

Query: 61  EECLSAKGSSLPLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKR 120
           E+CLS+ G+ LP P      S     P  P  S+ +P    S SP  +   +P KARSKR
Sbjct: 382 EDCLSSTGNCLPAPKNVASDSA-TPKPSKPLQSMQKPQQKPS-SPLQNL-VIPGKARSKR 441

Query: 121 RQAPA-NTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKA 180
           ++A    TS    +  HHL+     P  Q+L +TSS  D  LLQQ YWLADSEL++P K 
Sbjct: 442 KRATTITTSFSNWV--HHLN-----PENQNLHITSS--DPPLLQQAYWLADSELIVPKKE 501

Query: 181 RGGG------------------EEEREKKVDMDQRDTTVKKSLGLQQKQGA-----GSGR 240
                                 EEE E++ +  + +  V+   G +++ G      G  R
Sbjct: 502 ESSSNNNNNNNSMVKEEEEVEEEEEEEEEEEETREEVEVEVEKGNKERWGNLEGSNGQPR 561

Query: 241 RCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKR 286
           RC+HC AQRTPQWR GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+ HSNSHK+
Sbjct: 562 RCTHCLAQRTPQWRAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYKHSNSHKK 618

[Close]
BLAST of CmoCh06G017200 vs. TAIR10
Match: AT5G25830.1 (AT5G25830.1 GATA transcription factor 12)

HSP 1 Score: 121.7 bits (304), Expect = 7.4e-28
Identity = 99/255 (38.82%), Postives = 132/255 (51.76%), Query Frame = 1 

Query: 28  STLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPLPPPQLSTHLNNPPPPPN 87
           ++   DLC   + + ++   LEWLS  V+E LS      P  +   +L +   + P P +
Sbjct: 65  TSFSGDLC---IPSDDLADELEWLSNIVDESLS------PEDVHKLELISGFKSRPDPKS 124

Query: 88  SLSRPTPSSSDSP-FSHFSAVPSKARSKRRQAPA-NTSIRPLIGQHHLDQL----NLLPS 147
               P   +S SP F+   +VP+KARSKR +A A N + R L+ +   D       +L S
Sbjct: 125 DTGSPENPNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSS 184

Query: 148 KQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSLGL 207
           +Q   L+  ++  LL+            L  K    G   R+K V   +           
Sbjct: 185 QQ--HLSPPTSPPLLMAP----------LGKKQAVDGGHRRKKDVSSPE----------- 244

Query: 208 QQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFV 267
               G    RRC HC   +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA SPTFV
Sbjct: 245 ---SGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPAASPTFV 283

Query: 268 SFLHSNSHKRVMEMR 277
              HSNSH++VME+R
Sbjct: 305 LAKHSNSHRKVMELR 283

[Close]
BLAST of CmoCh06G017200 vs. TAIR10
Match: AT3G24050.1 (AT3G24050.1 GATA transcription factor 1)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-27
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 210 GRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSH 269
           GR+C HC A++TPQWR GP GPKTLCNACGVRY KSGRLVPEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 270 KRVMEMR 277
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]
BLAST of CmoCh06G017200 vs. TAIR10
Match: AT4G32890.1 (AT4G32890.1 GATA transcription factor 9)

HSP 1 Score: 119.0 bits (297), Expect = 4.8e-27
Identity = 68/145 (46.90%), Postives = 89/145 (61.38%), Query Frame = 1 

Query: 133 LDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKA-RGGGEEEREKKVDMDQR 192
           +D+ N+    ++    S SA +    +   LADS+   P K  R   E++    +D+D  
Sbjct: 132 IDESNVAVPAKARSKRSRSAASTWASRLLSLADSDETNPKKKQRRVKEQDFAGDMDVDCG 191

Query: 193 DTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPE 252
           ++              G GRRC HC  ++TPQWR GP+GPKTLCNACGVRY KSGRLVPE
Sbjct: 192 ES--------------GGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPE 251

Query: 253 YRPANSPTFVSFLHSNSHKRVMEMR 277
           YRPA+SPTFV   HSNSH++VME+R
Sbjct: 252 YRPASSPTFVMARHSNSHRKVMELR 261

[Close]
BLAST of CmoCh06G017200 vs. TAIR10
Match: AT3G60530.1 (AT3G60530.1 GATA transcription factor 4)

HSP 1 Score: 118.2 bits (295), Expect = 8.2e-27
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 1 

Query: 207 AGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHS 266
           A   RRC+HC +++TPQWR GPLGPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HS
Sbjct: 154 ADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVLTQHS 213

Query: 267 NSHKRVMEMR 277
           NSH++VME+R
Sbjct: 214 NSHRKVMELR 222

[Close]
BLAST of CmoCh06G017200 vs. TAIR10
Match: AT5G66320.1 (AT5G66320.1 GATA transcription factor 5)

HSP 1 Score: 115.5 bits (288), Expect = 5.3e-26
Identity = 105/278 (37.77%), Postives = 135/278 (48.56%), Query Frame = 1 

Query: 4   QPKMVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDV----NLEWLSAFVEECL 63
           Q +MV V+SE   DD   L+     +  DD  SL  + + +      NLEWLS FVE+  
Sbjct: 65  QHEMVRVSSEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEWLSHFVEDSF 124

Query: 64  SAKGSSLPLPLPPPQLSTHLNNPPPPPNSLSRP-TPSSSDSPFSHFSAVPSKARSKRRQA 123
           +           P    T    P         P T  + ++ F   S VP+KARSKR + 
Sbjct: 125 TEYSG-------PNLTGTPTEKPAWLTGDRKHPVTAVTEETCFK--SPVPAKARSKRNRN 184

Query: 124 PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 183
                    +G          PS      +SSS  +     + W + +ELL P       
Sbjct: 185 GLKVWS---LGSSSSSG----PSSSGSTSSSSSGPS-----SPWFSGAELLEPVVTSERP 244

Query: 184 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 243
              ++ K    +R      S  LQQ Q     R+CSHC  Q+TPQWR GP+G KTLCNAC
Sbjct: 245 PFPKKHK----KRSAESVFSGELQQLQPQ---RKCSHCGVQKTPQWRAGPMGAKTLCNAC 304

Query: 244 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMR 277
           GVRY KSGRL+PEYRPA SPTF S LHSN H++V+EMR
Sbjct: 305 GVRY-KSGRLLPEYRPACSPTFSSELHSNHHRKVIEMR 313

[Close]
BLAST of CmoCh06G017200 vs. NCBI nr
Match: gi|449446764|ref|XP_004141141.1| (PREDICTED: GATA transcription factor 9-like [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 5.1e-103
Identity = 213/288 (73.96%), Postives = 240/288 (83.33%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQDDCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQQETASVNYKCEQDDCSNLEAEFSSTIDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKRRQ-AP 120
            KGS+LPLP PP QLST LNNPP  P+SLS+  P+SS+S F+HF AVP KARSKRR+  P
Sbjct: 61  TKGSTLPLP-PPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFAHFPAVPGKARSKRRRRTP 120

Query: 121 ANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGE 180
           +  S+ PLI +  L QLNLL +K SLQLT+S+ D LLLQQTYWLADSELLLP KARGG  
Sbjct: 121 SKMSVLPLISRR-LRQLNLLQNKHSLQLTTST-DPLLLQQTYWLADSELLLPPKARGG-- 180

Query: 181 EEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACG 240
            EREK VDM Q +TTV+ S+  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNACG
Sbjct: 181 -EREKTVDMGQIETTVENSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNACG 240

Query: 241 VRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTA 288
           VRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST+
Sbjct: 241 VRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTS 282

[Close]
BLAST of CmoCh06G017200 vs. NCBI nr
Match: gi|659130742|ref|XP_008465326.1| (PREDICTED: GATA transcription factor 12-like [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 6.9e-100
Identity = 214/288 (74.31%), Postives = 238/288 (82.64%), Query Frame = 1 

Query: 1   MDYQPKMVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQDDCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQTETASVNYKCEQDDCSNLEAEFSSTVDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKRRQ-AP 120
            KGS+ PLP PP QLST LNNPP  P+SLS+  P+SS+S F+HF AVP KARSKRR+  P
Sbjct: 61  TKGSTHPLP-PPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFTHFPAVPGKARSKRRRRTP 120

Query: 121 ANT-SIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGG 180
           +N  S+ PLI +  L QLNLL +K SLQLTSS+ D LLLQQTYWLADSELLLP +ARGG 
Sbjct: 121 SNKMSVLPLISRR-LRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPEARGG- 180

Query: 181 EEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNAC 240
             EREK VDM Q  TTV+KS+  QQ QGAGSGRRCSHCQAQRTPQWR GPLGPKTLCNAC
Sbjct: 181 --EREKTVDMGQIKTTVEKSVKKQQ-QGAGSGRRCSHCQAQRTPQWRSGPLGPKTLCNAC 240

Query: 241 GVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTST 287
           GVRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST
Sbjct: 241 GVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTST 281

[Close]
BLAST of CmoCh06G017200 vs. NCBI nr
Match: gi|802585528|ref|XP_012070476.1| (PREDICTED: GATA transcription factor 7-like [Jatropha curcas])

HSP 1 Score: 206.8 bits (525), Expect = 5.0e-50
Identity = 134/270 (49.63%), Postives = 168/270 (62.22%), Query Frame = 1 

Query: 32  DDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPL---PPPQLSTHLNNPPPPPNS 91
           DDL S Q T  EVDV+LEWLS FVE+CLS+KG+ LP P    PP ++S      P     
Sbjct: 40  DDLFSAQNT--EVDVSLEWLSVFVEDCLSSKGNCLPPPTNTTPPAEVSVKKQEKP----- 99

Query: 92  LSRPTPSSSDSPFSHFSAVPSKARSKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLT 151
             +  P S+++    F  +P KARSKR++     +  PL    + +QL L          
Sbjct: 100 --QHNPQSNNNSLEKF-VIPGKARSKRKRVTGVKTRNPLSSWSYCNQLTL---------N 159

Query: 152 SSSADTLLLQQTYWLADSELLLPHK----ARGGGEEEREKKVD--MDQRDTTVKKSLGLQ 211
             S+D  LLQQ YWLADSEL++P K          + R+ ++D  ++Q     K+SL + 
Sbjct: 160 FPSSDPPLLQQAYWLADSELIMPKKDTTTTTTTTTKARDSELDENLEQEKVVAKESLRIL 219

Query: 212 QKQGAGSG--RRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTF 271
           +         RRCSHC AQRTPQWR GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTF
Sbjct: 220 ENSNGQQQQPRRCSHCLAQRTPQWRAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTF 279

Query: 272 VSFLHSNSHKRVMEMRMINASSSTSTAFSS 291
           VS+LHSNSHK+VMEMRM  A+SST+T F+S
Sbjct: 280 VSYLHSNSHKKVMEMRM--ATSSTTTVFNS 287

[Close]
BLAST of CmoCh06G017200 vs. NCBI nr
Match: gi|1009167892|ref|XP_015902364.1| (PREDICTED: GATA transcription factor 9-like [Ziziphus jujuba])

HSP 1 Score: 206.5 bits (524), Expect = 6.5e-50
Identity = 154/301 (51.16%), Postives = 183/301 (60.80%), Query Frame = 1 

Query: 8   VSVNSENEQDD-----CSKLKS-ELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSA 67
           VSV  E++Q+      CSKL     ++T  DDL S Q T  E DVNLEWLS FVE+CLS+
Sbjct: 7   VSVAGEHQQEQVISPPCSKLSGLSTAATGLDDLFSAQNT--EADVNLEWLSIFVEDCLSS 66

Query: 68  KGSSLPLPLPPPQLSTHLNNPP-----PPPNSL---SRPTPSSSDSPFSHFSAVPSKARS 127
           KG+ LP   PP  + T    P      P P  L   S+  P+SS S   +  AVP KARS
Sbjct: 67  KGNCLP---PPTNIETTSTTPKSSKALPLPLHLQKKSQQNPTSSSSSLQNL-AVPGKARS 126

Query: 128 KRRQA--PANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLP 187
           KR++A  P N +  PL    +    NL+   Q+LQ+ SS  D  LL+Q YWLADSEL +P
Sbjct: 127 KRKRAVVPKNRT-NPLTSWSN----NLILQGQTLQIPSS--DPPLLKQAYWLADSELFVP 186

Query: 188 HKARGGG------EEEREKKVDMDQRDTTVKKSLGLQQKQGAGS-GRRCSHCQAQRTPQW 247
            K           EE  E++ D DQ+   V K   L+   G     RRC+HC AQRTPQW
Sbjct: 187 KKDENSSLRSDEHEETGEEEADEDQKRIMVSKE-NLECNNGQQPMPRRCTHCLAQRTPQW 246

Query: 248 RGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSST 286
           R GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+LHSNSHK+VMEMRM   SS  
Sbjct: 247 RAGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMSLLSSIP 292

[Close]
BLAST of CmoCh06G017200 vs. NCBI nr
Match: gi|590643072|ref|XP_007030701.1| (GATA transcription factor 9, putative [Theobroma cacao])

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 144/300 (48.00%), Postives = 173/300 (57.67%), Query Frame = 1 

Query: 8   VSVNSENEQDD-----CSKLKSELSSTLD-DDLCSLQMTTMEVDVNLEWLSAFVEECLSA 67
           VSV+ E  Q+      CSKL + L++T   DDL   Q T  EVD +LEWLS FVE+CLS+
Sbjct: 7   VSVSGEYHQEQVLSSPCSKLGATLATTGTLDDLFPAQNT--EVDKSLEWLSIFVEDCLSS 66

Query: 68  KGSSLPLPLPPPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKRRQAPAN 127
            G+ +P+       +        P  SL +  P     P      VP KARSKR++  A 
Sbjct: 67  TGNCIPVAATTNVQNKSTTTATKPAQSLQQ-KPQQIIPPSLQKFVVPGKARSKRKRVAAT 126

Query: 128 TSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHK-------- 187
           T  +  +         L    Q+L L SS  D  LLQQ YWLADSEL++P K        
Sbjct: 127 TLSKTKMNPFTSWSYQLNSHNQNLHLASS--DPPLLQQAYWLADSELIVPKKEDDSNNSS 186

Query: 188 --ARGGGEEEREKKVDMDQRDTTV--KKSLGLQQ----KQGAGSGRRCSHCQAQRTPQWR 247
              RG  E E  KK +M+   T V  K+SLG  +    +Q     RRC+HC AQRTPQWR
Sbjct: 187 SNMRGNSETEESKKEEMEGEKTVVVCKESLGSLEGNSGQQQQQQPRRCTHCLAQRTPQWR 246

Query: 248 GGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTS 286
            GPLGPKTLCNACGVRY KSGRL+PEYRPA SPTFVS+LHSNSHK+VMEMRM   SS  S
Sbjct: 247 AGPLGPKTLCNACGVRY-KSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMALLSSIPS 300

The following BLAST results are available for this feature:
BLAST of CmoCh06G017200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GAT12_ARATH1.3e-2638.82GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1[more]
GATA1_ARATH3.8e-2677.61GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2[more]
GATA9_ARATH8.6e-2646.90GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1[more]
GATA4_ARATH1.5e-2575.71GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1[more]
GATA5_ARATH9.5e-2537.77GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1[more]
BLAST of CmoCh06G017200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LD86_CUCSA3.5e-10373.96Uncharacterized protein OS=Cucumis sativus GN=Csa_3G843820 PE=4 SV=1[more]
A0A067KXQ6_JATCU3.5e-5049.63Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02738 PE=4 SV=1[more]
A0A061F2V5_THECC1.9e-4848.00GATA transcription factor 9, putative OS=Theobroma cacao GN=TCM_026451 PE=4 SV=1[more]
F6HLA6_VITVI2.5e-4847.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07550 PE=4 SV=... [more]
A5BTD3_VITVI2.5e-4847.13Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041707 PE=4 SV=1[more]
BLAST of CmoCh06G017200 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25830.17.4e-2838.82 GATA transcription factor 12[more]
AT3G24050.12.2e-2777.61 GATA transcription factor 1[more]
AT4G32890.14.8e-2746.90 GATA transcription factor 9[more]
AT3G60530.18.2e-2775.71 GATA transcription factor 4[more]
AT5G66320.15.3e-2637.77 GATA transcription factor 5[more]
BLAST of CmoCh06G017200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446764|ref|XP_004141141.1|5.1e-10373.96PREDICTED: GATA transcription factor 9-like [Cucumis sativus][more]
gi|659130742|ref|XP_008465326.1|6.9e-10074.31PREDICTED: GATA transcription factor 12-like [Cucumis melo][more]
gi|802585528|ref|XP_012070476.1|5.0e-5049.63PREDICTED: GATA transcription factor 7-like [Jatropha curcas][more]
gi|1009167892|ref|XP_015902364.1|6.5e-5051.16PREDICTED: GATA transcription factor 9-like [Ziziphus jujuba][more]
gi|590643072|ref|XP_007030701.1|2.7e-4848.00GATA transcription factor 9, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000679Znf_GATA
IPR013088Znf_NHR/GATA
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G017200.1CmoCh06G017200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 213..247
score: 9.7
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 207..258
score: 1.2
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 213..238
scor
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 207..250
score: 12
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 210..248
score: 2.6
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 139..277
score: 1.4E-71coord: 24..121
score: 1.4
NoneNo IPR availablePANTHERPTHR10071:SF161SUBFAMILY NOT NAMEDcoord: 139..277
score: 1.4E-71coord: 24..121
score: 1.4
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 209..272
score: 2.28