Cp4.1LG08g05910 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g05910
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMyb-like protein J
LocationCp4.1LG08 : 520550 .. 521515 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGCCGACTAATAATGTGGTGCTTCAGCAGTCGCCGACGGCAATGACGATGCTTCCGGAAAATCAATCAATGAGATTCGAGAATGACTTTAGGCTTGCTGATCAATCCATGAGTGAGGCGGAGTTTTATTGTCCTAATGAAACAATGCCGTTTTGTGCTCCTCCCACTTATAATAACTTATCTCCTCCGGCTCCGGCTCCGTCTCCAACTCCAACTCCGGCTCCGGCTCCGGCATTTTATTGCCCTAATTATAGCTATGAAATAATGACGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTCTGGCTCTGGCTCCGACTCCGATGGAGAGTACTGGTTTACTTTCAGATGTCATCAATTTTTGCTCCAATAATACGAGGCATGTTGTAGCGGCAAACAATGGCAGAGTCAGCCAATCATCAAAAACGAGGATAATTTGGACAATTGACGAGCACAAGTAAAACAACTAAAATAACTGTGTAATTTGTGTAATAACTGTGGTTAAAAAAAATGAAATAATTGTGTTTTTTTTGTTGTGCAGGTTATTTCTAGTAGGAATGGCGATATTTGGCTCGGGTAATTGGAAAAGCATCGCAAATAAAGTCGTGCTTACAAAAACACACATCCAAGTAGCTAGTCACGCTCAAAAGTTTTCCACTCGCCAACAAATACCGAAAGAACAGAGAAAAAGAAAGAGTATTCATGATATCGATACGGTCGATCCCGAATTATTGTCGGAGGTGTATGCTCGTTTAGAATCACAACCAGAAACACGAACACGATCACGACCACCACCACCACCACCACCGCCACGGCCATTGTTGACAAACTATTCCCCGTCGCGCATGGATCCAAATCCGACCCAACCGTACGAGTATTTCAATAATTACGTGCCCAATGTTGAACAGCTGCCACCGCAGCCATATTTTGTGCATAACCAAAACATTATCCACTAA

mRNA sequence

ATGGCGATGCCGACTAATAATGTGGTGCTTCAGCAGTCGCCGACGGCAATGACGATGCTTCCGGAAAATCAATCAATGAGATTCGAGAATGACTTTAGGCTTGCTGATCAATCCATGAGTGAGGCGGAGTTTTATTGTCCTAATGAAACAATGCCGTTTTGTGCTCCTCCCACTTATAATAACTTATCTCCTCCGGCTCCGGCTCCGTCTCCAACTCCAACTCCGGCTCCGGCTCCGGCATTTTATTGCCCTAATTATAGCTATGAAATAATGACGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTCTGGCTCTGGCTCCGACTCCGATGGAGAGTACTGGTTTACTTTCAGATGTCATCAATTTTTGCTCCAATAATACGAGGCATGTTGTAGCGGCAAACAATGGCAGAGTCAGCCAATCATCAAAAACGAGGATAATTTGGACAATTGACGAGCACAAGTTATTTCTAGTAGGAATGGCGATATTTGGCTCGGGTAATTGGAAAAGCATCGCAAATAAAGTCGTGCTTACAAAAACACACATCCAAGTAGCTAGTCACGCTCAAAAGTTTTCCACTCGCCAACAAATACCGAAAGAACAGAGAAAAAGAAAGAGTATTCATGATATCGATACGGTCGATCCCGAATTATTGTCGGAGGTGTATGCTCGTTTAGAATCACAACCAGAAACACGAACACGATCACGACCACCACCACCACCACCACCGCCACGGCCATTGTTGACAAACTATTCCCCGTCGCGCATGGATCCAAATCCGACCCAACCGTACGAGTATTTCAATAATTACGTGCCCAATGTTGAACAGCTGCCACCGCAGCCATATTTTGTGCATAACCAAAACATTATCCACTAA

Coding sequence (CDS)

ATGGCGATGCCGACTAATAATGTGGTGCTTCAGCAGTCGCCGACGGCAATGACGATGCTTCCGGAAAATCAATCAATGAGATTCGAGAATGACTTTAGGCTTGCTGATCAATCCATGAGTGAGGCGGAGTTTTATTGTCCTAATGAAACAATGCCGTTTTGTGCTCCTCCCACTTATAATAACTTATCTCCTCCGGCTCCGGCTCCGTCTCCAACTCCAACTCCGGCTCCGGCTCCGGCATTTTATTGCCCTAATTATAGCTATGAAATAATGACGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTCTGGCTCTGGCTCCGACTCCGATGGAGAGTACTGGTTTACTTTCAGATGTCATCAATTTTTGCTCCAATAATACGAGGCATGTTGTAGCGGCAAACAATGGCAGAGTCAGCCAATCATCAAAAACGAGGATAATTTGGACAATTGACGAGCACAAGTTATTTCTAGTAGGAATGGCGATATTTGGCTCGGGTAATTGGAAAAGCATCGCAAATAAAGTCGTGCTTACAAAAACACACATCCAAGTAGCTAGTCACGCTCAAAAGTTTTCCACTCGCCAACAAATACCGAAAGAACAGAGAAAAAGAAAGAGTATTCATGATATCGATACGGTCGATCCCGAATTATTGTCGGAGGTGTATGCTCGTTTAGAATCACAACCAGAAACACGAACACGATCACGACCACCACCACCACCACCACCGCCACGGCCATTGTTGACAAACTATTCCCCGTCGCGCATGGATCCAAATCCGACCCAACCGTACGAGTATTTCAATAATTACGTGCCCAATGTTGAACAGCTGCCACCGCAGCCATATTTTGTGCATAACCAAAACATTATCCACTAA

Protein sequence

MAMPTNNVVLQQSPTAMTMLPENQSMRFENDFRLADQSMSEAEFYCPNETMPFCAPPTYNNLSPPAPAPSPTPTPAPAPAFYCPNYSYEIMTFCAPSTYNNLSPLALAPTPMESTGLLSDVINFCSNNTRHVVAANNGRVSQSSKTRIIWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLESQPETRTRSRPPPPPPPPRPLLTNYSPSRMDPNPTQPYEYFNNYVPNVEQLPPQPYFVHNQNIIH
Homology
[Close]
BLAST of Cp4.1LG08g05910 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-12
Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 1 

Query: 135 ANNGRVS-QSSKTRIIWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKF 194
           +++GR S Q  K  + WT +EHKLFL+G+  +G G+W++I+   V+T+T  QVASHAQK+
Sbjct: 118 SSSGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 177

Query: 195 STRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLESQPETRTRSRPPPPP 244
             RQ    + ++R SIHDI TV+   LS      ++Q  +    +PP  P
Sbjct: 178 FIRQLSGGKDKRRASIHDITTVN---LS------DNQTPSPDNKKPPSSP 218

[Close]
BLAST of Cp4.1LG08g05910 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.3e-09
Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 1 

Query: 135 ANNGRVSQSSKTRIIWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFS 194
           +N+GR     K  + WT +EHKLFL+G+   G G+W+ I+   V T+T  QVASHAQK+ 
Sbjct: 85  SNSGR---ERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 144

Query: 195 TRQQIPKEQRKRKSIHDI--DTVDPELLSEVYARLE-------SQPETRTRSRPPPPPPP 247
            R+     +R+R S+ DI  D+V    + EV  + E       + P T+T + P  P   
Sbjct: 145 LRRSNLNRRRRRSSLFDITTDSVSVMPIEEVENKQEIPVVAPATLPTTKTNAFPVAPTVG 202

[Close]
BLAST of Cp4.1LG08g05910 vs. TrEMBL
Match: Q8S900_SOYBN (Syringolide-induced protein 1-3-1A OS=Glycine max GN=1-3-1A PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1 

Query: 150 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSI 209
           WT +EH+LFL+G++ FG G+W+SI+  VV+T+T  QVASHAQK+  RQ   K++RKR SI
Sbjct: 120 WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSI 179

Query: 210 HDIDTVD 217
           HDI TVD
Sbjct: 180 HDITTVD 186

[Close]
BLAST of Cp4.1LG08g05910 vs. TrEMBL
Match: A0A0B0NFJ5_GOSAR (Transcription factor MYB1R1 OS=Gossypium arboreum GN=F383_15855 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 1 

Query: 150 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSI 209
           WT +EHKLFL+G+  FG G+W+SI+  VV+T+T  QVASHAQK+  RQ   K++RKR SI
Sbjct: 124 WTEEEHKLFLIGLQKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQSAVKKERKRSSI 183

Query: 210 HDIDTVDPELLS-EVYARLESQPETRTRSRP 240
           HDI TVD + +   V     S+P    +  P
Sbjct: 184 HDITTVDSKTMDVPVEQNRGSEPHGMVQQAP 214

[Close]
BLAST of Cp4.1LG08g05910 vs. TrEMBL
Match: A0A0D2Q884_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G118200 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 1 

Query: 150 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSI 209
           WT +EHKLFL+G+  FG G+W+SI+  VV+T+T  QVASHAQK+  RQ   K++RKR SI
Sbjct: 124 WTEEEHKLFLIGLQKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQSAVKKERKRSSI 183

Query: 210 HDIDTVDPELLS-EVYARLESQPETRTRSRP 240
           HDI TVD + +   V     S+P    +  P
Sbjct: 184 HDITTVDSKTMDVPVEQNRGSEPHGMVQQAP 214

[Close]
BLAST of Cp4.1LG08g05910 vs. TrEMBL
Match: A0A151TQ52_CAJCA (Myb-like protein J OS=Cajanus cajan GN=KK1_008325 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1 

Query: 150 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSI 209
           WT +EH+LFL+G++ FG G+W+SI+  VV+T+T  QVASHAQK+  RQ   K++RKR SI
Sbjct: 122 WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSI 181

Query: 210 HDIDTVD 217
           HDI TVD
Sbjct: 182 HDITTVD 188

[Close]
BLAST of Cp4.1LG08g05910 vs. TrEMBL
Match: A0A0J8E475_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g097390 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 40/73 (54.79%), Postives = 56/73 (76.71%), Query Frame = 1 

Query: 150 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSI 209
           WT +EH+LFL+G+  +G G+W+SI+  VV+T+T  QVASHAQK+  RQ   K++RKR SI
Sbjct: 176 WTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYYLRQNSGKKERKRSSI 235

Query: 210 HDIDTVDPELLSE 223
           HDI TVD +L ++
Sbjct: 236 HDITTVDEKLAAQ 248

[Close]
BLAST of Cp4.1LG08g05910 vs. TAIR10
Match: AT5G04760.1 (AT5G04760.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-17
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 1 

Query: 150 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSI 209
           WT +EHKLFL+G+  +G G+W+SI+  VV+T+T  QVASHAQK+  RQ   K++RKR SI
Sbjct: 101 WTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSI 160

Query: 210 HDIDTVDPEL 220
           HDI TVD  L
Sbjct: 161 HDITTVDATL 170

[Close]
BLAST of Cp4.1LG08g05910 vs. TAIR10
Match: AT5G08520.1 (AT5G08520.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 9.5e-15
Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 1 

Query: 88  YEIMTFCAPSTYNNLSPLALAPTPMESTGLLSDV-INFCSNNTRHVVAANNGRVSQSSKT 147
           YE++        +   PL    +P  S G   D   +       H   +N    S+S + 
Sbjct: 54  YELLVEDVTRIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQE 113

Query: 148 R---IIWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQ 207
           R   I WT DEH+LFL+G+  +G G+W+SI+   V+T+T  QVASHAQK+  R     + 
Sbjct: 114 RRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKD 173

Query: 208 RKRKSIHDIDTV 216
           R+R SIHDI +V
Sbjct: 174 RRRSSIHDITSV 185

[Close]
BLAST of Cp4.1LG08g05910 vs. TAIR10
Match: AT1G49010.1 (AT1G49010.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 53/167 (31.74%), Postives = 83/167 (49.70%), Query Frame = 1 

Query: 135 ANNGRVSQSSKTRIIWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFS 194
           +   R  Q  +  I WT +EH+LFL+G+  FG G+W+SI+   V+++T  QVASHAQK+ 
Sbjct: 121 SGGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF 180

Query: 195 TRQQIPKEQRKRKSIHDIDTVDPELLS--------EVYARLESQPETRTRSRPPPPPPPP 254
            R       R+R SIHDI TV+ +  +        +V     +QP+ + + +P    PP 
Sbjct: 181 IRLNSMNRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQPQPQPQQHHPPT 240

Query: 255 RPLLTNYSPSRMDPNPTQPYEYFNNYVPNVEQLPPQPYFVHNQNIIH 294
              L  Y  + +      P ++  + V     LPP P   H+ +  H
Sbjct: 241 MAGLGMYGGAPVGQPIIAPPDHMGSAVGTPVMLPP-PMGTHHHHHHH 286

[Close]
BLAST of Cp4.1LG08g05910 vs. TAIR10
Match: AT5G01200.1 (AT5G01200.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 1 

Query: 145 KTRIIWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQR 204
           K  + WT DEH  FL+G+  +G G+W++IA   V T+T  QVASHAQK+  RQ    + +
Sbjct: 143 KKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGKDK 202

Query: 205 KRKSIHDIDTVD 217
           +R SIHDI TV+
Sbjct: 203 RRSSIHDITTVN 214

[Close]
BLAST of Cp4.1LG08g05910 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 72.4 bits (176), Expect = 5.2e-13
Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 1 

Query: 145 KTRIIWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQR 204
           K  + WT +EHKLFL+G+  +G G+W++I+   V+T+T  QVASHAQK+  RQ    + +
Sbjct: 138 KKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDK 197

Query: 205 KRKSIHDIDTVDPELLSEVYARLESQPETRTRSRPPPPPPPPRPLLTNYSPSRMDPNPTQ 264
           +R SIHDI TV+ E  + +     S      RSR           LT +  ++ D N TQ
Sbjct: 198 RRASIHDITTVNLEEEASLETNKSSIVVGDQRSR-----------LTAFPWNQTDNNGTQ 256

Query: 265 PYEYFNNYVPN 276
             + FN  + N
Sbjct: 258 A-DAFNITIGN 256

[Close]
BLAST of Cp4.1LG08g05910 vs. NCBI nr
Match: gi|659108977|ref|XP_008454484.1| (PREDICTED: myb-like protein J [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 2.8e-16
Identity = 70/184 (38.04%), Postives = 98/184 (53.26%), Query Frame = 1 

Query: 58  TYNNLSPPAPAPSPTPTPAPAPAFYCPNYSYEIMTFCAPSTYNNLSPLALAPTPMESTGL 117
           T+NN   P P P  +        FY P+         + ST +N    A      E TGL
Sbjct: 126 TFNNRHSPYPNPQTSH-------FYSPS---------SISTTHNNDQFA---DSTEYTGL 185

Query: 118 LSDVINF------CSNNTRHVVA-------ANNGRVSQSSKTRIIWTIDEHKLFLVGMAI 177
           LSD++         S++T ++ +       ++N    +++  R  W++ EH+LFL GM +
Sbjct: 186 LSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQL 245

Query: 178 FGSGNWKSIANKVVLTKTHIQVASHAQK-FSTRQQIPKEQRKRKSIHDIDTVDPELLSEV 228
            G   WK IA+ VV+TKTH QVASHAQK F    ++ K +RKR SIHDI TV+PE L+EV
Sbjct: 246 LGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEV 290

[Close]
BLAST of Cp4.1LG08g05910 vs. NCBI nr
Match: gi|729434863|ref|XP_010520203.1| (PREDICTED: transcription factor DIVARICATA-like [Tarenaya hassleriana])

HSP 1 Score: 90.5 bits (223), Expect = 5.2e-15
Identity = 44/94 (46.81%), Postives = 69/94 (73.40%), Query Frame = 1 

Query: 149 IWTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKS 208
           +W+  EHKLFL+G+  +G G+W+SI+  VV+TKT  QVASHAQKF  RQ+   E RKR S
Sbjct: 96  VWSAYEHKLFLIGLERYGKGDWRSISRNVVVTKTAAQVASHAQKFFIRQEKAAEGRKRPS 155

Query: 209 IHDIDTVDPELLSEVYAR----LESQPETRTRSR 239
           IHD +TVD +L+++++ +     ++Q +T+T+++
Sbjct: 156 IHDDNTVDMDLVAKLFPQWLDAFQTQTQTQTQTQ 189

[Close]
BLAST of Cp4.1LG08g05910 vs. NCBI nr
Match: gi|918463753|gb|ALA09221.1| (MYB/HD-like transcription factor, partial [Glycine max])

HSP 1 Score: 87.8 bits (216), Expect = 3.4e-14
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1 

Query: 150 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSI 209
           WT +EH+LFL+G++ FG G+W+SI+  VV+T+T  QVASHAQK+  RQ   K++RKR SI
Sbjct: 109 WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSI 168

Query: 210 HDIDTVD 217
           HDI TVD
Sbjct: 169 HDITTVD 175

[Close]
BLAST of Cp4.1LG08g05910 vs. NCBI nr
Match: gi|870845107|gb|KMS97920.1| (hypothetical protein BVRB_4g097390 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 87.8 bits (216), Expect = 3.4e-14
Identity = 40/73 (54.79%), Postives = 56/73 (76.71%), Query Frame = 1 

Query: 150 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSI 209
           WT +EH+LFL+G+  +G G+W+SI+  VV+T+T  QVASHAQK+  RQ   K++RKR SI
Sbjct: 176 WTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYYLRQNSGKKERKRSSI 235

Query: 210 HDIDTVDPELLSE 223
           HDI TVD +L ++
Sbjct: 236 HDITTVDEKLAAQ 248

[Close]
BLAST of Cp4.1LG08g05910 vs. NCBI nr
Match: gi|728831161|gb|KHG10604.1| (Transcription factor MYB1R1 [Gossypium arboreum])

HSP 1 Score: 87.8 bits (216), Expect = 3.4e-14
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 1 

Query: 150 WTIDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIPKEQRKRKSI 209
           WT +EHKLFL+G+  FG G+W+SI+  VV+T+T  QVASHAQK+  RQ   K++RKR SI
Sbjct: 124 WTEEEHKLFLIGLQKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQSAVKKERKRSSI 183

Query: 210 HDIDTVDPELLS-EVYARLESQPETRTRSRP 240
           HDI TVD + +   V     S+P    +  P
Sbjct: 184 HDITTVDSKTMDVPVEQNRGSEPHGMVQQAP 214

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g05910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DIV_ANTMA2.4e-1240.91Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1[more]
MY1R1_SOLTU3.3e-0937.19Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1[more]
BLAST of Cp4.1LG08g05910 vs. TrEMBL
Match NameE-valueIdentityDescription
Q8S900_SOYBN2.4e-1459.70Syringolide-induced protein 1-3-1A OS=Glycine max GN=1-3-1A PE=2 SV=1[more]
A0A0B0NFJ5_GOSAR2.4e-1449.45Transcription factor MYB1R1 OS=Gossypium arboreum GN=F383_15855 PE=4 SV=1[more]
A0A0D2Q884_GOSRA2.4e-1449.45Uncharacterized protein OS=Gossypium raimondii GN=B456_006G118200 PE=4 SV=1[more]
A0A151TQ52_CAJCA2.4e-1459.70Myb-like protein J OS=Cajanus cajan GN=KK1_008325 PE=4 SV=1[more]
A0A0J8E475_BETVU2.4e-1454.79Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g097390 PE=4 S... [more]
BLAST of Cp4.1LG08g05910 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G04760.12.0e-1758.57 Duplicated homeodomain-like superfamily protein[more]
AT5G08520.19.5e-1536.36 Duplicated homeodomain-like superfamily protein[more]
AT1G49010.13.1e-1331.74 Duplicated homeodomain-like superfamily protein[more]
AT5G01200.13.1e-1348.61 Duplicated homeodomain-like superfamily protein[more]
AT5G58900.15.2e-1337.40 Homeodomain-like transcriptional regulator[more]
BLAST of Cp4.1LG08g05910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108977|ref|XP_008454484.1|2.8e-1638.04PREDICTED: myb-like protein J [Cucumis melo][more]
gi|729434863|ref|XP_010520203.1|5.2e-1546.81PREDICTED: transcription factor DIVARICATA-like [Tarenaya hassleriana][more]
gi|918463753|gb|ALA09221.1|3.4e-1459.70MYB/HD-like transcription factor, partial [Glycine max][more]
gi|870845107|gb|KMS97920.1|3.4e-1454.79hypothetical protein BVRB_4g097390 [Beta vulgaris subsp. vulgaris][more]
gi|728831161|gb|KHG10604.1|3.4e-1449.45Transcription factor MYB1R1 [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR006447Myb_dom_plants
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g05910.1Cp4.1LG08g05910.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 150..192
score: 9.
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 145..196
score: 2.5
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 142..192
score: 6.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 143..197
score: 1.4
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 142..198
score: 10
NoneNo IPR availablePANTHERPTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERcoord: 150..212
score: 1.0
NoneNo IPR availablePANTHERPTHR24078:SF207PROTEIN DNJ-19coord: 150..212
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g05910Cucsa.094830Cucumber (Gy14) v1cgycpeB0200
Cp4.1LG08g05910CmaCh06G016550Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g05910Cla010849Watermelon (97103) v1cpewmB840
Cp4.1LG08g05910Csa4G015160Cucumber (Chinese Long) v2cpecuB869
Cp4.1LG08g05910MELO3C017719Melon (DHL92) v3.5.1cpemeB817
Cp4.1LG08g05910ClCG07G015620Watermelon (Charleston Gray)cpewcgB791
Cp4.1LG08g05910CSPI04G03330Wild cucumber (PI 183967)cpecpiB871
Cp4.1LG08g05910Lsi07G000420Bottle gourd (USVL1VR-Ls)cpelsiB723
Cp4.1LG08g05910MELO3C017719.2Melon (DHL92) v3.6.1cpemedB955
Cp4.1LG08g05910CsaV3_4G003320Cucumber (Chinese Long) v3cpecucB1065
Cp4.1LG08g05910Bhi01G002108Wax gourdcpewgoB1114
Cp4.1LG08g05910CsGy4G003220Cucumber (Gy14) v2cgybcpeB575
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g05910Silver-seed gourdcarcpeB0974
Cp4.1LG08g05910Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG08g05910Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g05910Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g05910Cucurbita moschata (Rifu)cmocpeB796