CSPI04G03330 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G03330
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Descriptionmyb-like transcription factor family protein
LocationChr4 : 2051026 .. 2052168 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAAATAAGAATGTGTCTTTTCCTCATTCTTCTGGTTTTTCTCTTCATACTCCAACCAGTTCATCTAATTTTGATCAAAATTCAGTTACATTGGGTTCGAGTATAGATGATAATCATAAGATGCCATTGGAGTTTTCTTCATGTAAATGGATAAATAATGCAGGGTTGGAGCAATTACCAGCGATGGAAGAGACTAGTTTGAGAAGGGTGAATCATGGTTTATCATTAACAAATTCCAACGGTAACTTTGAAACTGCACAATATTACCCTTCTTTCCCTCAATTTAATGGTCTCAATGATAACTTTGAAACTCAGCAATTTTACCATCCTTCTTATACTCAATTTAATGATCCCAACAATAACTACAACAACATGGGTGATGCTTTTCTTTGTTCTCCTTCTACTCTTTCAACAATGCATAACTCATCTAATGATTCTATTAGATATAATAATGGTTTTCTCTCTGATGTCGTCAATTCCAACTCCACTAAAACAACCATGACATTTGAAAACGGTTGTTCTTTTGACTCCAATTTGAATAATCCTTCTCTCTTTCATGATCCTCAAACATCACATTTTTGCTCTCCTTCCACTTTTTCAATGACTCATAATAATGGTCAATTTGCTGACTCCACTAGTTATACTGGTTTGCTTTCCGACATCCCTACCCAAATGATCAGACCACATGTTCCAACAATATCTTTGTCAACGACAAATTTGTTGCCATCGTCATCATTACCGCCACGACCGCTATTGTCACAAAACTCATTGAAGATAAGAAACAACTCCACAAATTGGAGCATAAGGGAGCACAAGTACGTATATAACAATACAAATATAATATATGCAACTCATCTAAGTTATTTACTAATACATACATATTATTGCAGATTATTTCTAGCAGGGATGCAACTTTTAGGCCAAGGTGCATGGAAAAAAATTGCAAACTACGTGGTGATTACAAAAACACACACACAAGTGGCTAGTCATGCACAGAAGTACTTTCTTCGCCAGACCTCACAAAAACATAAGAGGACAAGTATTCATGATATCACCACTGCCGAGCCTGAATTTTTTGCTCTAGCGGAATCACGTATAGCGCAACACATGAAGCATCTCAACAAAAAGGATCAATAA

mRNA sequence

ATGGCAGAAAATAAGAATGTGTCTTTTCCTCATTCTTCTGGTTTTTCTCTTCATACTCCAACCAGTTCATCTAATTTTGATCAAAATTCAGTTACATTGGGTTCGAGTATAGATGATAATCATAAGATGCCATTGGAGTTTTCTTCATGTAAATGGATAAATAATGCAGGGTTGGAGCAATTACCAGCGATGGAAGAGACTAGTTTGAGAAGGGTGAATCATGGTTTATCATTAACAAATTCCAACGGTAACTTTGAAACTGCACAATATTACCCTTCTTTCCCTCAATTTAATGGTCTCAATGATAACTTTGAAACTCAGCAATTTTACCATCCTTCTTATACTCAATTTAATGATCCCAACAATAACTACAACAACATGGGTGATGCTTTTCTTTGTTCTCCTTCTACTCTTTCAACAATGCATAACTCATCTAATGATTCTATTAGATATAATAATGGTTTTCTCTCTGATGTCGTCAATTCCAACTCCACTAAAACAACCATGACATTTGAAAACGGTTGTTCTTTTGACTCCAATTTGAATAATCCTTCTCTCTTTCATGATCCTCAAACATCACATTTTTGCTCTCCTTCCACTTTTTCAATGACTCATAATAATGGTCAATTTGCTGACTCCACTAGTTATACTGGTTTGCTTTCCGACATCCCTACCCAAATGATCAGACCACATGTTCCAACAATATCTTTGTCAACGACAAATTTGTTGCCATCGTCATCATTACCGCCACGACCGCTATTGTCACAAAACTCATTGAAGATAAGAAACAACTCCACAAATTGGAGCATAAGGGAGCACAAATTATTTCTAGCAGGGATGCAACTTTTAGGCCAAGGTGCATGGAAAAAAATTGCAAACTACGTGGTGATTACAAAAACACACACACAAGTGGCTAGTCATGCACAGAAGTACTTTCTTCGCCAGACCTCACAAAAACATAAGAGGACAAGTATTCATGATATCACCACTGCCGAGCCTGAATTTTTTGCTCTAGCGGAATCACGTATAGCGCAACACATGAAGCATCTCAACAAAAAGGATCAATAA

Coding sequence (CDS)

ATGGCAGAAAATAAGAATGTGTCTTTTCCTCATTCTTCTGGTTTTTCTCTTCATACTCCAACCAGTTCATCTAATTTTGATCAAAATTCAGTTACATTGGGTTCGAGTATAGATGATAATCATAAGATGCCATTGGAGTTTTCTTCATGTAAATGGATAAATAATGCAGGGTTGGAGCAATTACCAGCGATGGAAGAGACTAGTTTGAGAAGGGTGAATCATGGTTTATCATTAACAAATTCCAACGGTAACTTTGAAACTGCACAATATTACCCTTCTTTCCCTCAATTTAATGGTCTCAATGATAACTTTGAAACTCAGCAATTTTACCATCCTTCTTATACTCAATTTAATGATCCCAACAATAACTACAACAACATGGGTGATGCTTTTCTTTGTTCTCCTTCTACTCTTTCAACAATGCATAACTCATCTAATGATTCTATTAGATATAATAATGGTTTTCTCTCTGATGTCGTCAATTCCAACTCCACTAAAACAACCATGACATTTGAAAACGGTTGTTCTTTTGACTCCAATTTGAATAATCCTTCTCTCTTTCATGATCCTCAAACATCACATTTTTGCTCTCCTTCCACTTTTTCAATGACTCATAATAATGGTCAATTTGCTGACTCCACTAGTTATACTGGTTTGCTTTCCGACATCCCTACCCAAATGATCAGACCACATGTTCCAACAATATCTTTGTCAACGACAAATTTGTTGCCATCGTCATCATTACCGCCACGACCGCTATTGTCACAAAACTCATTGAAGATAAGAAACAACTCCACAAATTGGAGCATAAGGGAGCACAAATTATTTCTAGCAGGGATGCAACTTTTAGGCCAAGGTGCATGGAAAAAAATTGCAAACTACGTGGTGATTACAAAAACACACACACAAGTGGCTAGTCATGCACAGAAGTACTTTCTTCGCCAGACCTCACAAAAACATAAGAGGACAAGTATTCATGATATCACCACTGCCGAGCCTGAATTTTTTGCTCTAGCGGAATCACGTATAGCGCAACACATGAAGCATCTCAACAAAAAGGATCAATAA
Homology
[Close]
BLAST of CSPI04G03330 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.7e-13
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 1 

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQTS--QK 321
           R     W+  EHKLFL G++  G+G W+ I+   VIT+T TQVASHAQKYF+RQ S  + 
Sbjct: 128 RKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKD 187

Query: 322 HKRTSIHDITT 331
            +R SIHDITT
Sbjct: 188 KRRASIHDITT 198

[Close]
BLAST of CSPI04G03330 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.3e-12
Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 1 

Query: 257 NSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQT 316
           NS + R     W+  EHKLFL G+Q +G+G W+ I+   V T+T TQVASHAQKYFLR++
Sbjct: 86  NSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRS 145

Query: 317 --SQKHKRTSIHDITT 331
             +++ +R+S+ DITT
Sbjct: 146 NLNRRRRRSSLFDITT 161

[Close]
BLAST of CSPI04G03330 vs. Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 8.1e-10
Identity = 48/148 (32.43%), Postives = 77/148 (52.03%), Query Frame = 1 

Query: 182 NNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTTN 241
           N+P+       S+  +P T S+ +NN    ++ S +   ++        +    + +TT 
Sbjct: 301 NSPTTSTSSTHSNTSTPITVSIINNNN---NNNSNSNNNNNNNNNNNNNNTNNTTTTTTT 360

Query: 242 LLPSSSLPPRPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTH 301
              +S     P   + SLK       W+  EH  FL G+Q+ G+GAWK+IA +V  T+T 
Sbjct: 361 ATTTSGGKTNPTGKKTSLK-----QGWTKEEHIRFLNGIQIHGKGAWKEIAQFVG-TRTP 420

Query: 302 TQVASHAQKYFLRQTSQKHKRTSIHDIT 330
           TQ+ SHAQKY+LRQ  +   + SIHD++
Sbjct: 421 TQIQSHAQKYYLRQKQETKNKRSIHDLS 439

[Close]
BLAST of CSPI04G03330 vs. TrEMBL
Match: A0A0A0KTY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015160 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 2.4e-194
Identity = 342/355 (96.34%), Postives = 347/355 (97.75%), Query Frame = 1 

Query: 1   MAENKNVSFPHSSGFSLHTPTSSSNFDQNSVTLGSSIDDNHKMPLEFSSCKWINNAGLEQ 60
           MAENKNVSFPHSSGFSLHTPTS SNFDQNSVTLG +IDDN+KMPLEFSSC WI+NA LEQ
Sbjct: 1   MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMPLEFSSCNWIDNARLEQ 60

Query: 61  LPAMEETSLRRVNHGLSLTNSNGNFETAQYYPSFPQFNGLNDNFETQQFYHPSYTQFNDP 120
           LPAMEETSLRRVNHGLSLTN NGNFET QYYPSFPQFNGLNDNFET QFYHPSYTQFNDP
Sbjct: 61  LPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFNDP 120

Query: 121 NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN 180
           NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN
Sbjct: 121 NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN 180

Query: 181 LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT 240
           LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT
Sbjct: 181 LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT 240

Query: 241 NLLPSSSLPPRPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKT 300
           NLLPSSSLPP+PLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVV+TKT
Sbjct: 241 NLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKT 300

Query: 301 HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKKDQ 356
           HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNK DQ
Sbjct: 301 HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ 355

[Close]
BLAST of CSPI04G03330 vs. TrEMBL
Match: A0A0A0KYZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G014580 PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 3.1e-186
Identity = 333/357 (93.28%), Postives = 336/357 (94.12%), Query Frame = 1 

Query: 1   MAENKNVSFPHSSGFSLHTPTSSSNFDQNSVTLGSSIDDNHKMP--LEFSSCKWINNAGL 60
           MAENKNVSFPHSSG SLHTPTS  NFDQNSV L  SIDDNH+M   LEFSSC WINN G 
Sbjct: 1   MAENKNVSFPHSSGSSLHTPTSPYNFDQNSVALSPSIDDNHEMSLGLEFSSCNWINNVGS 60

Query: 61  EQLPAMEETSLRRVNHGLSLTNSNGNFETAQYYPSFPQFNGLNDNFETQQFYHPSYTQFN 120
           EQLP MEETSLRRVNH LSLTN NGNFET QYYPSFPQFNGLNDNFET QFYHPSYTQFN
Sbjct: 61  EQLPTMEETSLRRVNHSLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFN 120

Query: 121 DPNNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD 180
           DPNNNYNNMGDAFLCSPSTLST HNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD
Sbjct: 121 DPNNNYNNMGDAFLCSPSTLSTTHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD 180

Query: 181 SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS 240
           SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS
Sbjct: 181 SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS 240

Query: 241 TTNLLPSSSLPPRPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVIT 300
           TTNLLPSSSLPP+PLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVIT
Sbjct: 241 TTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVIT 300

Query: 301 KTHTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKKDQ 356
           KTHTQVASHAQKYFLRQTS KHKRTSIHDITTAEPEFFALAE+RIAQHMK LN KDQ
Sbjct: 301 KTHTQVASHAQKYFLRQTSPKHKRTSIHDITTAEPEFFALAEARIAQHMKRLNNKDQ 357

[Close]
BLAST of CSPI04G03330 vs. TrEMBL
Match: A0A0A0KJP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495660 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.5e-15
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 1 

Query: 250 PRPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQ 309
           PRP+  + S   R     W+ +EH+LFL G++  G+G W+ I+   VIT+T TQVASHAQ
Sbjct: 103 PRPVSEKTSTTERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQ 162

Query: 310 KYFLRQTSQK--HKRTSIHDITTAEPEFFALAESRIAQ 346
           KYFLRQ S K   KR+SIHDITT E      + + I Q
Sbjct: 163 KYFLRQESAKKDRKRSSIHDITTVEGSLVTTSTTAIGQ 200

[Close]
BLAST of CSPI04G03330 vs. TrEMBL
Match: M5WIS8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010926mg PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.4e-15
Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = 1 

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQTSQK-- 321
           R   T W+ +EHKLFL G++  G+G W+ I+  VV+T+T TQVASHAQKYFLRQ+S K  
Sbjct: 110 RKKGTPWTEQEHKLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQSSVKKE 169

Query: 322 HKRTSIHDITTAEPEFFALAESR 343
            KR+SIHDITT E    A+   R
Sbjct: 170 RKRSSIHDITTVESNSVAVPADR 192

[Close]
BLAST of CSPI04G03330 vs. TrEMBL
Match: V4U9T9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016071mg PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14
Identity = 44/73 (60.27%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQTSQK-- 321
           R   T W+  EHKLFL G++  G+G W+ I+  VV+T+T TQVASHAQKYFLRQTS K  
Sbjct: 179 RKKGTPWTEEEHKLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQTSVKKE 238

Query: 322 HKRTSIHDITTAE 333
            KR+SIHDITT +
Sbjct: 239 RKRSSIHDITTVD 251

[Close]
BLAST of CSPI04G03330 vs. TAIR10
Match: AT5G04760.1 (AT5G04760.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 86.3 bits (212), Expect = 4.2e-17
Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 1 

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQTSQK-- 321
           R   T W+  EHKLFL G++  G+G W+ I+  VV+T+T TQVASHAQKYFLRQ S K  
Sbjct: 95  RKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKE 154

Query: 322 HKRTSIHDITTAE 333
            KR+SIHDITT +
Sbjct: 155 RKRSSIHDITTVD 167

[Close]
BLAST of CSPI04G03330 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-15
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 1 

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQTS--QK 321
           R     W+  EHKLFL G++  G+G W+ I+   VIT+T TQVASHAQKYF+RQ S  + 
Sbjct: 137 RKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKD 196

Query: 322 HKRTSIHDITTAEPEFFALAES 342
            +R SIHDITT   E  A  E+
Sbjct: 197 KRRASIHDITTVNLEEEASLET 218

[Close]
BLAST of CSPI04G03330 vs. TAIR10
Match: AT1G74840.1 (AT1G74840.1 Homeodomain-like superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 4.4e-14
Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 1 

Query: 252 PLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKY 311
           P+ S N    R     W+  EHKLFL G+Q +G+G WK I+   V T+T TQVASHAQKY
Sbjct: 82  PMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKY 141

Query: 312 FLRQT--SQKHKRTSIHDITT 331
           FLR++  +++ +R+S+ D+TT
Sbjct: 142 FLRRSNLNRRRRRSSLFDMTT 162

[Close]
BLAST of CSPI04G03330 vs. TAIR10
Match: AT3G10580.1 (AT3G10580.1 Homeodomain-like superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 7.5e-14
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 1 

Query: 268 WSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQTSQKHKRTSIHD 327
           WS  EH+LFL G+   G+G WK I+   V +++  QVASHAQKYFLRQ ++K KR SIHD
Sbjct: 97  WSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLRQKNKKGKRFSIHD 156

Query: 328 ITTAEPE 335
           +T  + E
Sbjct: 157 MTLGDAE 163

[Close]
BLAST of CSPI04G03330 vs. TAIR10
Match: AT5G56840.1 (AT5G56840.1 myb-like transcription factor family protein)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-13
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 1 

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQTS---Q 321
           R     W+  EH+ FL G++ LG+G W+ I+   V+TK+ TQVASHAQKYFLRQT+    
Sbjct: 87  RKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHH 146

Query: 322 KHKRTSIHDITTA 332
           K +RTS+ D+ +A
Sbjct: 147 KRRRTSLFDMVSA 159

[Close]
BLAST of CSPI04G03330 vs. NCBI nr
Match: gi|700197917|gb|KGN53075.1| (hypothetical protein Csa_4G015160 [Cucumis sativus])

HSP 1 Score: 686.0 bits (1769), Expect = 3.4e-194
Identity = 342/355 (96.34%), Postives = 347/355 (97.75%), Query Frame = 1 

Query: 1   MAENKNVSFPHSSGFSLHTPTSSSNFDQNSVTLGSSIDDNHKMPLEFSSCKWINNAGLEQ 60
           MAENKNVSFPHSSGFSLHTPTS SNFDQNSVTLG +IDDN+KMPLEFSSC WI+NA LEQ
Sbjct: 1   MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMPLEFSSCNWIDNARLEQ 60

Query: 61  LPAMEETSLRRVNHGLSLTNSNGNFETAQYYPSFPQFNGLNDNFETQQFYHPSYTQFNDP 120
           LPAMEETSLRRVNHGLSLTN NGNFET QYYPSFPQFNGLNDNFET QFYHPSYTQFNDP
Sbjct: 61  LPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFNDP 120

Query: 121 NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN 180
           NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN
Sbjct: 121 NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN 180

Query: 181 LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT 240
           LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT
Sbjct: 181 LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT 240

Query: 241 NLLPSSSLPPRPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKT 300
           NLLPSSSLPP+PLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVV+TKT
Sbjct: 241 NLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKT 300

Query: 301 HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKKDQ 356
           HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNK DQ
Sbjct: 301 HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ 355

[Close]
BLAST of CSPI04G03330 vs. NCBI nr
Match: gi|778697457|ref|XP_011654326.1| (PREDICTED: myb-like protein J [Cucumis sativus])

HSP 1 Score: 659.1 bits (1699), Expect = 4.5e-186
Identity = 333/357 (93.28%), Postives = 336/357 (94.12%), Query Frame = 1 

Query: 1   MAENKNVSFPHSSGFSLHTPTSSSNFDQNSVTLGSSIDDNHKMP--LEFSSCKWINNAGL 60
           MAENKNVSFPHSSG SLHTPTS  NFDQNSV L  SIDDNH+M   LEFSSC WINN G 
Sbjct: 1   MAENKNVSFPHSSGSSLHTPTSPYNFDQNSVALSPSIDDNHEMSLGLEFSSCNWINNVGS 60

Query: 61  EQLPAMEETSLRRVNHGLSLTNSNGNFETAQYYPSFPQFNGLNDNFETQQFYHPSYTQFN 120
           EQLP MEETSLRRVNH LSLTN NGNFET QYYPSFPQFNGLNDNFET QFYHPSYTQFN
Sbjct: 61  EQLPTMEETSLRRVNHSLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFN 120

Query: 121 DPNNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD 180
           DPNNNYNNMGDAFLCSPSTLST HNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD
Sbjct: 121 DPNNNYNNMGDAFLCSPSTLSTTHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD 180

Query: 181 SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS 240
           SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS
Sbjct: 181 SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS 240

Query: 241 TTNLLPSSSLPPRPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVIT 300
           TTNLLPSSSLPP+PLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVIT
Sbjct: 241 TTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVIT 300

Query: 301 KTHTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKKDQ 356
           KTHTQVASHAQKYFLRQTS KHKRTSIHDITTAEPEFFALAE+RIAQHMK LN KDQ
Sbjct: 301 KTHTQVASHAQKYFLRQTSPKHKRTSIHDITTAEPEFFALAEARIAQHMKRLNNKDQ 357

[Close]
BLAST of CSPI04G03330 vs. NCBI nr
Match: gi|659108977|ref|XP_008454484.1| (PREDICTED: myb-like protein J [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 8.7e-73
Identity = 172/287 (59.93%), Postives = 204/287 (71.08%), Query Frame = 1 

Query: 80  NSNGNFETAQYYPSFPQ-FNGLNDNFETQQFYHPSYTQFNDPNNNYNNMGDAFL------ 139
           N   N +T Q YPS    F   NDNFET ++YHPS +Q  DPN+NY+NM DAFL      
Sbjct: 22  NHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLT 81

Query: 140 CSPSTLSTMHN--SSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSNLNNPSLFHDP 199
           CSPS LST HN  S NDSI +N GFLSDVVNS+STKT+    +  +F+   N  S + +P
Sbjct: 82  CSPSILSTTHNKDSFNDSIGHN-GFLSDVVNSSSTKTSSKSLDSMTFN---NRHSPYPNP 141

Query: 200 QTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTTNLLPSSSLPP 259
           QTSHF SPS+ S THNN QFADST YTGLLSDI    +RP VPT+S STTNL   SSLPP
Sbjct: 142 QTSHFYSPSSISTTHNNDQFADSTEYTGLLSDI--VKMRPRVPTMSSSTTNL---SSLPP 201

Query: 260 RPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHA 319
           RP  S NSL I+NN+    WS++EH+LFLAGMQLLG+  WKKIA++VVITKTH QVASHA
Sbjct: 202 RPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHA 261

Query: 320 QKYFL---RQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNK 353
           QKYFL   + +  K KR+SIHDITT EPEF A  E+ + QH+K LN+
Sbjct: 262 QKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 299

[Close]
BLAST of CSPI04G03330 vs. NCBI nr
Match: gi|449448460|ref|XP_004141984.1| (PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 1 

Query: 250 PRPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQ 309
           PRP+  + S   R     W+ +EH+LFL G++  G+G W+ I+   VIT+T TQVASHAQ
Sbjct: 103 PRPVSEKTSTTERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQ 162

Query: 310 KYFLRQTSQK--HKRTSIHDITTAEPEFFALAESRIAQ 346
           KYFLRQ S K   KR+SIHDITT E      + + I Q
Sbjct: 163 KYFLRQESAKKDRKRSSIHDITTVEGSLVTTSTTAIGQ 200

[Close]
BLAST of CSPI04G03330 vs. NCBI nr
Match: gi|694427976|ref|XP_009341585.1| (PREDICTED: transcription factor DIVARICATA [Pyrus x bretschneideri])

HSP 1 Score: 91.3 bits (225), Expect = 3.7e-15
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 1 

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQTSQK-- 321
           R   T W+  EHKLFL G++  G+G W+ I+  VV+T+T TQVASHAQKYFLRQTS K  
Sbjct: 108 RKKGTPWTEEEHKLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQTSMKKE 167

Query: 322 HKRTSIHDITTAEPEFFALAESR 343
            KR+SIHDITT E    ++   R
Sbjct: 168 RKRSSIHDITTVESNSVSVPADR 190

The following BLAST results are available for this feature:
BLAST of CSPI04G03330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DIV_ANTMA2.7e-1354.93Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1[more]
MY1R1_SOLTU2.3e-1250.00Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1[more]
MYBJ_DICDI8.1e-1032.43Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1[more]
BLAST of CSPI04G03330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTY5_CUCSA2.4e-19496.34Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015160 PE=4 SV=1[more]
A0A0A0KYZ4_CUCSA3.1e-18693.28Uncharacterized protein OS=Cucumis sativus GN=Csa_4G014580 PE=4 SV=1[more]
A0A0A0KJP9_CUCSA1.5e-1548.98Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495660 PE=4 SV=1[more]
M5WIS8_PRUPE4.4e-1555.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010926mg PE=4 SV=1[more]
V4U9T9_9ROSI1.7e-1460.27Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016071mg PE=4 SV=1[more]
BLAST of CSPI04G03330 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G04760.14.2e-1758.90 Duplicated homeodomain-like superfamily protein[more]
AT5G58900.15.2e-1551.22 Homeodomain-like transcriptional regulator[more]
AT1G74840.14.4e-1448.15 Homeodomain-like superfamily protein[more]
AT3G10580.17.5e-1453.73 Homeodomain-like superfamily protein[more]
AT5G56840.11.3e-1349.32 myb-like transcription factor family protein[more]
BLAST of CSPI04G03330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700197917|gb|KGN53075.1|3.4e-19496.34hypothetical protein Csa_4G015160 [Cucumis sativus][more]
gi|778697457|ref|XP_011654326.1|4.5e-18693.28PREDICTED: myb-like protein J [Cucumis sativus][more]
gi|659108977|ref|XP_008454484.1|8.7e-7359.93PREDICTED: myb-like protein J [Cucumis melo][more]
gi|449448460|ref|XP_004141984.1|2.2e-1548.98PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus][more]
gi|694427976|ref|XP_009341585.1|3.7e-1555.42PREDICTED: transcription factor DIVARICATA [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G03330.1CSPI04G03330.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 267..311
score: 1.
IPR001005SANT/Myb domainSMARTSM00717santcoord: 264..314
score: 6.
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 265..315
score: 3.0
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 267..310
score: 3.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 261..316
score: 1.4
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 260..316
score: 1
NoneNo IPR availablePANTHERPTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDcoord: 262..342
score: 8.2
NoneNo IPR availablePANTHERPTHR12374:SF25SUBFAMILY NOT NAMEDcoord: 262..342
score: 8.2