Cp4.1LG08g04020 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACTTTAAAGAAAAAAAGTTTCCACCTCTGGTTTTCCAAGCTCCGCCGCTTTCCGGCCGCCTTGAACCCGTCATCGCCACCGCACACGCCGAACAAAAAACCCCTTTCTCTTGAAAACTCCACCTCCACGGCAGCTGACGACTGTTGCTTCTCCGATGAATCCACCTCGGACTCCGACTCCGACGCCGACGCCGTTGTCCCTGACTTCTCTGCTGCTGTTGCTTCCCACCGCTTCTTCCTCTCCTCCCCCGGCTTCTCCAACTCCATCTTCGACTCCTCCCCCGACCACGCCGTCAAGGTCCGGAAGGTTTCGACGGACCCATTTGTGGATTTTCGAGGTTCAATGCAGGAGATGATCGAAGCCAGAAATCAGCCGGTGGACGTCCGGCGAGACTGGGAGTATCTACTGAATCTTCTCATTTGTTATCTCCAAATCAACTCCCTTGATACCCACAAGTTTATAACAACCGCTTTCTCCGACCTCCTCATTTACTTGCTGGAATCATCCCCGGAGTCACCCTCCGACCACCGTCTGCGGCGGCGGAATTGCCACTTGCAGAACTAA ATGTCCACTTTAAAGAAAAAAAGTTTCCACCTCTGGTTTTCCAAGCTCCGCCGCTTTCCGGCCGCCTTGAACCCGTCATCGCCACCGCACACGCCGAACAAAAAACCCCTTTCTCTTGAAAACTCCACCTCCACGGCAGCTGACGACTGTTGCTTCTCCGATGAATCCACCTCGGACTCCGACTCCGACGCCGACGCCGTTGTCCCTGACTTCTCTGCTGCTGTTGCTTCCCACCGCTTCTTCCTCTCCTCCCCCGGCTTCTCCAACTCCATCTTCGACTCCTCCCCCGACCACGCCGTCAAGGTCCGGAAGGTTTCGACGGACCCATTTGTGGATTTTCGAGGTTCAATGCAGGAGATGATCGAAGCCAGAAATCAGCCGGTGGACGTCCGGCGAGACTGGGAGTATCTACTGAATCTTCTCATTTGTTATCTCCAAATCAACTCCCTTGATACCCACAAGTTTATAACAACCGCTTTCTCCGACCTCCTCATTTACTTGCTGGAATCATCCCCGGAGTCACCCTCCGACCACCGTCTGCGGCGGCGGAATTGCCACTTGCAGAACTAA ATGTCCACTTTAAAGAAAAAAAGTTTCCACCTCTGGTTTTCCAAGCTCCGCCGCTTTCCGGCCGCCTTGAACCCGTCATCGCCACCGCACACGCCGAACAAAAAACCCCTTTCTCTTGAAAACTCCACCTCCACGGCAGCTGACGACTGTTGCTTCTCCGATGAATCCACCTCGGACTCCGACTCCGACGCCGACGCCGTTGTCCCTGACTTCTCTGCTGCTGTTGCTTCCCACCGCTTCTTCCTCTCCTCCCCCGGCTTCTCCAACTCCATCTTCGACTCCTCCCCCGACCACGCCGTCAAGGTCCGGAAGGTTTCGACGGACCCATTTGTGGATTTTCGAGGTTCAATGCAGGAGATGATCGAAGCCAGAAATCAGCCGGTGGACGTCCGGCGAGACTGGGAGTATCTACTGAATCTTCTCATTTGTTATCTCCAAATCAACTCCCTTGATACCCACAAGTTTATAACAACCGCTTTCTCCGACCTCCTCATTTACTTGCTGGAATCATCCCCGGAGTCACCCTCCGACCACCGTCTGCGGCGGCGGAATTGCCACTTGCAGAACTAA MSTLKKKSFHLWFSKLRRFPAALNPSSPPHTPNKKPLSLENSTSTAADDCCFSDESTSDSDSDADAVVPDFSAAVASHRFFLSSPGFSNSIFDSSPDHAVKVRKVSTDPFVDFRGSMQEMIEARNQPVDVRRDWEYLLNLLICYLQINSLDTHKFITTAFSDLLIYLLESSPESPSDHRLRRRNCHLQN
BLAST of Cp4.1LG08g04020 vs. Swiss-Prot
Match: OFP12_ARATH (Transcription repressor OFP12 OS=Arabidopsis thaliana GN=OFP12 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 5.0e-19 Identity = 78/183 (42.62%), Postives = 97/183 (53.01%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. Swiss-Prot
Match: OFP11_ARATH (Transcription repressor OFP11 OS=Arabidopsis thaliana GN=OFP11 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.6e-12 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. Swiss-Prot
Match: OFP16_ARATH (Transcription repressor OFP16 OS=Arabidopsis thaliana GN=OFP16 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. Swiss-Prot
Match: OFP14_ARATH (Transcription repressor OFP14 OS=Arabidopsis thaliana GN=OFP14 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 4.7e-09 Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. Swiss-Prot
Match: OPF13_ARATH (Transcription repressor OFP13 OS=Arabidopsis thaliana GN=OFP13 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.9e-06 Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TrEMBL
Match: A0A0A0L8Q1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146670 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 4.2e-65 Identity = 142/203 (69.95%), Postives = 158/203 (77.83%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TrEMBL
Match: A0A0D2T3I0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G239700 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29 Identity = 94/210 (44.76%), Postives = 119/210 (56.67%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TrEMBL
Match: N1NJM5_ARAHY (Uncharacterized protein OS=Arachis hypogaea GN=ARAX_AHF417E07-002 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27 Identity = 84/191 (43.98%), Postives = 109/191 (57.07%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TrEMBL
Match: A0A061EM48_THECC (Ovate family protein 12, putative (Fragment) OS=Theobroma cacao GN=TCM_020632 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.0e-26 Identity = 91/209 (43.54%), Postives = 121/209 (57.89%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TrEMBL
Match: A0A022RLY2_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a026971mg PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.6e-24 Identity = 67/138 (48.55%), Postives = 88/138 (63.77%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TAIR10
Match: AT1G05420.1 (AT1G05420.1 ovate family protein 12) HSP 1 Score: 95.9 bits (237), Expect = 2.8e-20 Identity = 78/183 (42.62%), Postives = 97/183 (53.01%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TAIR10
Match: AT4G14860.1 (AT4G14860.1 ovate family protein 11) HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TAIR10
Match: AT2G32100.1 (AT2G32100.1 ovate family protein 16) HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TAIR10
Match: AT1G79960.1 (AT1G79960.1 ovate family protein 14) HSP 1 Score: 62.8 bits (151), Expect = 2.7e-10 Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. TAIR10
Match: AT5G04820.1 (AT5G04820.1 ovate family protein 13) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07 Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. NCBI nr
Match: gi|700201849|gb|KGN56982.1| (hypothetical protein Csa_3G146670 [Cucumis sativus]) HSP 1 Score: 255.8 bits (652), Expect = 6.1e-65 Identity = 142/203 (69.95%), Postives = 158/203 (77.83%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. NCBI nr
Match: gi|659076431|ref|XP_008438676.1| (PREDICTED: uncharacterized protein LOC103483710 [Cucumis melo]) HSP 1 Score: 252.7 bits (644), Expect = 5.1e-64 Identity = 142/203 (69.95%), Postives = 156/203 (76.85%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. NCBI nr
Match: gi|823178531|ref|XP_012487168.1| (PREDICTED: transcription repressor OFP12 [Gossypium raimondii]) HSP 1 Score: 137.5 bits (345), Expect = 2.4e-29 Identity = 94/210 (44.76%), Postives = 119/210 (56.67%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. NCBI nr
Match: gi|574139408|emb|CCW28813.1| (putative protein, contains domain DUF623 [Arachis hypogaea]) HSP 1 Score: 131.0 bits (328), Expect = 2.3e-27 Identity = 84/191 (43.98%), Postives = 109/191 (57.07%), Query Frame = 1
BLAST of Cp4.1LG08g04020 vs. NCBI nr
Match: gi|1021565617|ref|XP_016174153.1| (PREDICTED: transcription repressor OFP12-like [Arachis ipaensis]) HSP 1 Score: 131.0 bits (328), Expect = 2.3e-27 Identity = 84/191 (43.98%), Postives = 109/191 (57.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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