Carg23520 (gene) Silver-seed gourd

Overview
NameCarg23520
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranscription repressor OFP12-like
LocationCucurbita_argyrosperma_scaffold_278 : 152141 .. 152755 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCACTCTCAAGAAAAATAATTTCCATCTCTGGTTCTCAAAGCTCCGCTGCTTTCCGGCCGCCGTGAAACCCTCATCGACGCCGCACATGCCCAACAAAAAACCCCTTTCCATTACCCACCTGGAAAACTCAGACAACTCCTCTACTTCCACCGCTGCTGATGATGGGTTTTTCTCCGACGACTCCACCTCCGATTCCGACGCCGTCCCCGACTTCTCCGCCGCCGTCGCTTCCCATCGTTTCTTCTTCTCCTCACCTGGCTGCTCCAACTCCATTTTCGACTCTTCTCCCGAAACCCATCACGGCGCCGCCGCCGTGCACGGCGGCGTCAAGGTTCGGAAGGTTTCTATAGACCCATTTATCGATTTTAGAGGTTCAATGCAGGAGATGGTCGAAGCAAGAGATCAGCCAGTGGACGTCCGGCGAGACTGGCAGTATCTACAAGAGCTTCTACTCTGTTATCTCCAAATCAACCCCATTGATACCCACAAGTTTATATTAAGAGCTTTCTCCGACCTCGTCGTTTCTTTACTGGAATCATCACCGGAATCACCCTCCAACCACCATCTCCGGCAGCACAATATGAACTCAAACAGCTGGTTAGTCCAATAA

mRNA sequence

ATGTCCACTCTCAAGAAAAATAATTTCCATCTCTGGTTCTCAAAGCTCCGCTGCTTTCCGGCCGCCGTGAAACCCTCATCGACGCCGCACATGCCCAACAAAAAACCCCTTTCCATTACCCACCTGGAAAACTCAGACAACTCCTCTACTTCCACCGCTGCTGATGATGGGTTTTTCTCCGACGACTCCACCTCCGATTCCGACGCCGTCCCCGACTTCTCCGCCGCCGTCGCTTCCCATCGTTTCTTCTTCTCCTCACCTGGCTGCTCCAACTCCATTTTCGACTCTTCTCCCGAAACCCATCACGGCGCCGCCGCCGTGCACGGCGGCGTCAAGGTTCGGAAGGTTTCTATAGACCCATTTATCGATTTTAGAGGTTCAATGCAGGAGATGGTCGAAGCAAGAGATCAGCCAGTGGACGTCCGGCGAGACTGGCAGTATCTACAAGAGCTTCTACTCTGTTATCTCCAAATCAACCCCATTGATACCCACAAGTTTATATTAAGAGCTTTCTCCGACCTCGTCGTTTCTTTACTGGAATCATCACCGGAATCACCCTCCAACCACCATCTCCGGCAGCACAATATGAACTCAAACAGCTGGTTAGTCCAATAA

Coding sequence (CDS)

ATGTCCACTCTCAAGAAAAATAATTTCCATCTCTGGTTCTCAAAGCTCCGCTGCTTTCCGGCCGCCGTGAAACCCTCATCGACGCCGCACATGCCCAACAAAAAACCCCTTTCCATTACCCACCTGGAAAACTCAGACAACTCCTCTACTTCCACCGCTGCTGATGATGGGTTTTTCTCCGACGACTCCACCTCCGATTCCGACGCCGTCCCCGACTTCTCCGCCGCCGTCGCTTCCCATCGTTTCTTCTTCTCCTCACCTGGCTGCTCCAACTCCATTTTCGACTCTTCTCCCGAAACCCATCACGGCGCCGCCGCCGTGCACGGCGGCGTCAAGGTTCGGAAGGTTTCTATAGACCCATTTATCGATTTTAGAGGTTCAATGCAGGAGATGGTCGAAGCAAGAGATCAGCCAGTGGACGTCCGGCGAGACTGGCAGTATCTACAAGAGCTTCTACTCTGTTATCTCCAAATCAACCCCATTGATACCCACAAGTTTATATTAAGAGCTTTCTCCGACCTCGTCGTTTCTTTACTGGAATCATCACCGGAATCACCCTCCAACCACCATCTCCGGCAGCACAATATGAACTCAAACAGCTGGTTAGTCCAATAA

Protein sequence

MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENSDNSSTSTAADDGFFSDDSTSDSDAVPDFSAAVASHRFFFSSPGCSNSIFDSSPETHHGAAAVHGGVKVRKVSIDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVSLLESSPESPSNHHLRQHNMNSNSWLVQ
Homology
[Close]
BLAST of Carg23520 vs. NCBI nr
Match: XP_022956079.1 (transcription repressor OFP12-like [Cucurbita moschata])

HSP 1 Score: 322.0 bits (824), Expect = 1.4e-84
Identity = 179/204 (87.75%), Postives = 179/204 (87.75%), Query Frame = 0 

Query: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENSXXXXXXXXXXXXXXX 60
           MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPL ITHLENS     XXXXXXXXXX
Sbjct: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLFITHLENSDNSSTXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXHRFXXXXPGCSNSIFDSSPETHHGAAAVHGGVKVRKVSIDP 120
           XXXXXX             HRF    PGCSNSIFDSSPETHHG AAVHGGVKVRKVSIDP
Sbjct: 61  XXXXXXSDAVPDFSAAVASHRFFFSSPGCSNSIFDSSPETHHG-AAVHGGVKVRKVSIDP 120

Query: 121 FIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVSLLE 180
           FIDFR SMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVSLLE
Sbjct: 121 FIDFRASMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVSLLE 180

Query: 181 SSPESPSNHHLRQHNMNSNSWLVQ 205
           SSPESPSNHHLRQHNMNSNSWLVQ
Sbjct: 181 SSPESPSNHHLRQHNMNSNSWLVQ 203

[Close]
BLAST of Carg23520 vs. NCBI nr
Match: XP_023528062.1 (transcription repressor OFP12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 201/207 (97.10%), Postives = 201/207 (97.10%), Query Frame = 0 

Query: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENSXXXXXXXXXXXXXXX 60
           MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENSXXXXXXXXXXXXXXX
Sbjct: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENSXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXHRFXXXXPGCSNSIFDSSPETHHGA---AAVHGGVKVRKVS 120
           XXXXXXXXXXXXXXXXXXX   XXXXPGCSNSIFDSSPETHHGA   AAVHGGVKVRKVS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXPGCSNSIFDSSPETHHGAAADAAVHGGVKVRKVS 120

Query: 121 IDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVS 180
           IDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVS
Sbjct: 121 IDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVS 180

Query: 181 LLESSPESPSNHHLRQHNMNSNSWLVQ 205
           LLESSPESPSNHHLRQHNMNSNSWLVQ
Sbjct: 181 LLESSPESPSNHHLRQHNMNSNSWLVQ 207

[Close]
BLAST of Carg23520 vs. NCBI nr
Match: XP_022979427.1 (transcription repressor OFP12-like [Cucurbita maxima])

HSP 1 Score: 266.2 bits (679), Expect = 9.4e-68
Identity = 179/207 (86.47%), Postives = 179/207 (86.47%), Query Frame = 0 

Query: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENSXXXXXXXXXXXXXXX 60
           MSTLKKNNFHLWFSKLRCFPAAVKPSSTPH PNKKPLSITHLENS XXXXXXXXXXXXXX
Sbjct: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHTPNKKPLSITHLENSDXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXHRFXXXXPGCSNSIFDSSPETHHGA---AAVHGGVKVRKVS 120
           XXXXXXXXXXXXXXXXXXX   XXXX                 A   AAVHGGVKVRKVS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAASAAVHGGVKVRKVS 120

Query: 121 IDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVS 180
           IDPF DFR SMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVS
Sbjct: 121 IDPFFDFRASMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVS 180

Query: 181 LLESSPESPSNHHLRQHNMNSNSWLVQ 205
           LLESSPESPSNHHLRQHNMNSN WLVQ
Sbjct: 181 LLESSPESPSNHHLRQHNMNSNRWLVQ 207

[Close]
BLAST of Carg23520 vs. NCBI nr
Match: XP_008438677.1 (PREDICTED: transcription repressor OFP12-like [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67
Identity = 136/205 (66.34%), Postives = 149/205 (72.68%), Query Frame = 0 

Query: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENS-XXXXXXXXXXXXXX 60
           MS+LKK+NFHLWFSKLRCFPA VKPSS P  PNKKP  ITHLENS               
Sbjct: 1   MSSLKKSNFHLWFSKLRCFPATVKPSSPPKTPNKKPSPITHLENSDYSSTSTAADDGFFS 60

Query: 61  XXXXXXXXXXXXXXXXXXXXHRFXXXXPGCSNSIFDSSPETHHGA---AAVHGGVKVRKV 120
                               HRF    PGCSNSIFDSSP+THH A   AAVHGGV+VRKV
Sbjct: 61  DESTSDSDAIVPDFSAAVASHRFFFSSPGCSNSIFDSSPDTHHSAAVSAAVHGGVEVRKV 120

Query: 121 SIDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVV 180
           S+DPF+DFR SMQEMVEARD+PVDVRRDW+YLQ+LLLCYL+INP+DTHKFILRAFSDLVV
Sbjct: 121 SMDPFVDFRASMQEMVEARDRPVDVRRDWEYLQDLLLCYLRINPVDTHKFILRAFSDLVV 180

Query: 181 SLLESSPESPSNHHLRQHNMNSNSW 202
            LLE SPES S+  LR HN+NSNSW
Sbjct: 181 YLLECSPESFSDRRLRPHNINSNSW 205

[Close]
BLAST of Carg23520 vs. NCBI nr
Match: KGN56982.1 (hypothetical protein Csa_3G146670 [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 1.8e-66
Identity = 170/205 (82.93%), Postives = 182/205 (88.78%), Query Frame = 0 

Query: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENS-XXXXXXXXXXXXXX 60
           MS+LKK NFHLWFSKLRCFPA VKPSS P  PNKKP SITHLENS    XXXXXXXXXXX
Sbjct: 1   MSSLKKRNFHLWFSKLRCFPATVKPSSPPQTPNKKPFSITHLENSDYSSXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXHRFXXXXPGCSNSIFDSSPETHHG---AAAVHGGVKVRKV 120
           XXXXXXXXXXXXXXXXXXXX   XXXXPGCSNSIFDSSP+THH    +AAVHGGV+VRKV
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXPGCSNSIFDSSPDTHHSTAVSAAVHGGVEVRKV 120

Query: 121 SIDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVV 180
           S+DPF+DFR SMQEMVEARD+PVDVRRDW+YLQELLLCYLQINP+DTHKFILRAFSDLVV
Sbjct: 121 SMDPFVDFRASMQEMVEARDRPVDVRRDWEYLQELLLCYLQINPVDTHKFILRAFSDLVV 180

Query: 181 SLLESSPESPSNHHLRQHNMNSNSW 202
            LLESSPES S+  +R HN+NSNSW
Sbjct: 181 YLLESSPESFSDRRIRPHNINSNSW 205

[Close]
BLAST of Carg23520 vs. TAIR10
Match: AT1G05420.1 (ovate family protein 12)

HSP 1 Score: 84.7 bits (208), Expect = 7.1e-17
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 87  PGCSNSIFDSSP---ETHHGAAA--VHGGVKVRKV--SIDPFIDFRGSMQEMVEARDQPV 146
           PGCSNSI DS       ++  A   + GG  V+    S DP+ DFR SMQEM++A     
Sbjct: 121 PGCSNSITDSPDLRCRDNYDTATRLLTGGTAVKHYVQSPDPYNDFRRSMQEMIDAVTNAG 180

Query: 147 DVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVSLL 180
           D+RR +++L ELLL YL +N  DTHKFI+RAF+D++VSLL
Sbjct: 181 DLRR-YEFLHELLLSYLSLNAADTHKFIIRAFADILVSLL 219

[Close]
BLAST of Carg23520 vs. TAIR10
Match: AT4G14860.1 (ovate family protein 11)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-14
Identity = 41/77 (53.25%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 109 GGVKVRK--VSIDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKF 168
           GG  + K   S DP+ DF  SM+EMVEARD   DV  D +YL ELL CYL +NP  TH+F
Sbjct: 99  GGTAIMKHIESPDPYRDFGRSMREMVEARDLTRDVVADREYLHELLFCYLYLNPKHTHRF 158

Query: 169 ILRAFSDLVVSLLESSP 184
           I+ AF+D ++ LL  SP
Sbjct: 159 IVSAFADTLLWLLSPSP 175

[Close]
BLAST of Carg23520 vs. TAIR10
Match: AT2G32100.1 (ovate family protein 16)

HSP 1 Score: 74.7 bits (182), Expect = 7.3e-14
Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 117 SIDPFIDFRGSMQEMVEARDQPVDVRRD----WQYLQELLLCYLQINPIDTHKFILRAFS 176
           S DP  DFR SMQEM++A     ++ RD    + +L ELLL YL +NP DTHKF++RAFS
Sbjct: 171 SPDPLTDFRRSMQEMIDAAIDAGELSRDPNDGYDFLDELLLTYLSLNPADTHKFVIRAFS 230

Query: 177 DLVVSLL 180
           D++VSLL
Sbjct: 231 DILVSLL 237

[Close]
BLAST of Carg23520 vs. TAIR10
Match: AT1G79960.1 (ovate family protein 14)

HSP 1 Score: 64.7 bits (156), Expect = 7.6e-11
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 0 

Query: 111 VKVRKVSIDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRA 170
           + V + + +P  DFR SM EM+E++    +   DW  ++ELL CYL +N   +HKFIL A
Sbjct: 193 IAVLRYTDEPQEDFRQSMVEMMESKLGMRESEVDWDLMEELLFCYLDLNDKKSHKFILSA 252

Query: 171 FSDLVVSLLESSPESPSNHHLR 193
           F DL+++L E         H+R
Sbjct: 253 FVDLIIALREKEKRITRKGHVR 274

[Close]
BLAST of Carg23520 vs. TAIR10
Match: AT2G36050.1 (ovate family protein 15)

HSP 1 Score: 57.8 bits (138), Expect = 9.2e-09
Identity = 33/104 (31.73%), Postives = 58/104 (55.77%), Query Frame = 0 

Query: 88  GCSNSIFDSSPETHHGAAAVHGGVKVRKVSIDPFIDFRGSMQEMVEARDQPVDVRRDWQY 147
           G +NSI + +           G +     S DP+ DF+ SM+EMVEA      +  DW+ 
Sbjct: 87  GETNSILEEATXXXXXXXXXXGFMLFSLESDDPYSDFKRSMEEMVEAH----ALHHDWKS 146

Query: 148 LQELLLCYLQINPIDTHKFILRAFSDLVVSLLESSPESPSNHHL 192
           L++LLL +L++N   +H++I  AF DL+++L   + ++  N+ +
Sbjct: 147 LEKLLLQFLKVNAKTSHRYIFAAFVDLLMNLALDTKKAIINNDI 186

[Close]
BLAST of Carg23520 vs. Swiss-Prot
Match: sp|F4I8R6|OFP12_ARATH (Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 87  PGCSNSIFDSSP---ETHHGAAA--VHGGVKVRKV--SIDPFIDFRGSMQEMVEARDQPV 146
           PGCSNSI DS       ++  A   + GG  V+    S DP+ DFR SMQEM++A     
Sbjct: 121 PGCSNSITDSPDLRCRDNYDTATRLLTGGTAVKHYVQSPDPYNDFRRSMQEMIDAVTNAG 180

Query: 147 DVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVSLL 180
           D+RR +++L ELLL YL +N  DTHKFI+RAF+D++VSLL
Sbjct: 181 DLRR-YEFLHELLLSYLSLNAADTHKFIIRAFADILVSLL 219

[Close]
BLAST of Carg23520 vs. Swiss-Prot
Match: sp|O23341|OFP11_ARATH (Transcription repressor OFP11 OS=Arabidopsis thaliana OX=3702 GN=OFP11 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-13
Identity = 41/77 (53.25%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 109 GGVKVRK--VSIDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKF 168
           GG  + K   S DP+ DF  SM+EMVEARD   DV  D +YL ELL CYL +NP  TH+F
Sbjct: 99  GGTAIMKHIESPDPYRDFGRSMREMVEARDLTRDVVADREYLHELLFCYLYLNPKHTHRF 158

Query: 169 ILRAFSDLVVSLLESSP 184
           I+ AF+D ++ LL  SP
Sbjct: 159 IVSAFADTLLWLLSPSP 175

[Close]
BLAST of Carg23520 vs. Swiss-Prot
Match: sp|Q9SKY9|OFP16_ARATH (Transcription repressor OFP16 OS=Arabidopsis thaliana OX=3702 GN=OFP16 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 117 SIDPFIDFRGSMQEMVEARDQPVDVRRD----WQYLQELLLCYLQINPIDTHKFILRAFS 176
           S DP  DFR SMQEM++A     ++ RD    + +L ELLL YL +NP DTHKF++RAFS
Sbjct: 171 SPDPLTDFRRSMQEMIDAAIDAGELSRDPNDGYDFLDELLLTYLSLNPADTHKFVIRAFS 230

Query: 177 DLVVSLL 180
           D++VSLL
Sbjct: 231 DILVSLL 237

[Close]
BLAST of Carg23520 vs. Swiss-Prot
Match: sp|Q9S7T5|OFP14_ARATH (Transcription repressor OFP14 OS=Arabidopsis thaliana OX=3702 GN=OFP14 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 0 

Query: 111 VKVRKVSIDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRA 170
           + V + + +P  DFR SM EM+E++    +   DW  ++ELL CYL +N   +HKFIL A
Sbjct: 193 IAVLRYTDEPQEDFRQSMVEMMESKLGMRESEVDWDLMEELLFCYLDLNDKKSHKFILSA 252

Query: 171 FSDLVVSLLESSPESPSNHHLR 193
           F DL+++L E         H+R
Sbjct: 253 FVDLIIALREKEKRITRKGHVR 274

[Close]
BLAST of Carg23520 vs. Swiss-Prot
Match: sp|Q9SJ45|OPF15_ARATH (Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-07
Identity = 33/104 (31.73%), Postives = 58/104 (55.77%), Query Frame = 0 

Query: 88  GCSNSIFDSSPETHHGAAAVHGGVKVRKVSIDPFIDFRGSMQEMVEARDQPVDVRRDWQY 147
           G +NSI + +           G +     S DP+ DF+ SM+EMVEA      +  DW+ 
Sbjct: 87  GETNSILEEATXXXXXXXXXXGFMLFSLESDDPYSDFKRSMEEMVEAH----ALHHDWKS 146

Query: 148 LQELLLCYLQINPIDTHKFILRAFSDLVVSLLESSPESPSNHHL 192
           L++LLL +L++N   +H++I  AF DL+++L   + ++  N+ +
Sbjct: 147 LEKLLLQFLKVNAKTSHRYIFAAFVDLLMNLALDTKKAIINNDI 186

[Close]
BLAST of Carg23520 vs. TrEMBL
Match: tr|A0A1S3AXN5|A0A1S3AXN5_CUCME (transcription repressor OFP12-like OS=Cucumis melo OX=3656 GN=LOC103483710 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.4e-67
Identity = 136/205 (66.34%), Postives = 149/205 (72.68%), Query Frame = 0 

Query: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENS-XXXXXXXXXXXXXX 60
           MS+LKK+NFHLWFSKLRCFPA VKPSS P  PNKKP  ITHLENS               
Sbjct: 1   MSSLKKSNFHLWFSKLRCFPATVKPSSPPKTPNKKPSPITHLENSDYSSTSTAADDGFFS 60

Query: 61  XXXXXXXXXXXXXXXXXXXXHRFXXXXPGCSNSIFDSSPETHHGA---AAVHGGVKVRKV 120
                               HRF    PGCSNSIFDSSP+THH A   AAVHGGV+VRKV
Sbjct: 61  DESTSDSDAIVPDFSAAVASHRFFFSSPGCSNSIFDSSPDTHHSAAVSAAVHGGVEVRKV 120

Query: 121 SIDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVV 180
           S+DPF+DFR SMQEMVEARD+PVDVRRDW+YLQ+LLLCYL+INP+DTHKFILRAFSDLVV
Sbjct: 121 SMDPFVDFRASMQEMVEARDRPVDVRRDWEYLQDLLLCYLRINPVDTHKFILRAFSDLVV 180

Query: 181 SLLESSPESPSNHHLRQHNMNSNSW 202
            LLE SPES S+  LR HN+NSNSW
Sbjct: 181 YLLECSPESFSDRRLRPHNINSNSW 205

[Close]
BLAST of Carg23520 vs. TrEMBL
Match: tr|A0A0A0L8Q1|A0A0A0L8Q1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146670 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 170/205 (82.93%), Postives = 182/205 (88.78%), Query Frame = 0 

Query: 1   MSTLKKNNFHLWFSKLRCFPAAVKPSSTPHMPNKKPLSITHLENS-XXXXXXXXXXXXXX 60
           MS+LKK NFHLWFSKLRCFPA VKPSS P  PNKKP SITHLENS    XXXXXXXXXXX
Sbjct: 1   MSSLKKRNFHLWFSKLRCFPATVKPSSPPQTPNKKPFSITHLENSDYSSXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXHRFXXXXPGCSNSIFDSSPETHHG---AAAVHGGVKVRKV 120
           XXXXXXXXXXXXXXXXXXXX   XXXXPGCSNSIFDSSP+THH    +AAVHGGV+VRKV
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXPGCSNSIFDSSPDTHHSTAVSAAVHGGVEVRKV 120

Query: 121 SIDPFIDFRGSMQEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVV 180
           S+DPF+DFR SMQEMVEARD+PVDVRRDW+YLQELLLCYLQINP+DTHKFILRAFSDLVV
Sbjct: 121 SMDPFVDFRASMQEMVEARDRPVDVRRDWEYLQELLLCYLQINPVDTHKFILRAFSDLVV 180

Query: 181 SLLESSPESPSNHHLRQHNMNSNSW 202
            LLESSPES S+  +R HN+NSNSW
Sbjct: 181 YLLESSPESFSDRRIRPHNINSNSW 205

[Close]
BLAST of Carg23520 vs. TrEMBL
Match: tr|A0A1R3ISZ9|A0A1R3ISZ9_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21485 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.7e-23
Identity = 65/126 (51.59%), Postives = 83/126 (65.87%), Query Frame = 0 

Query: 81  RFXXXXPGCSNSIFDSSPETHHGA------------AAVHGGVKVRKVSIDPFIDFRGSM 140
           RF    PG SNSI +SS +T   A            AA+ GGV V+K S DP+ DFR SM
Sbjct: 102 RFFFSSPGRSNSIVESSVDTRPEAESSSPSSTEEVPAALDGGVAVKKYSPDPYKDFRLSM 161

Query: 141 QEMVEARDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVSLLESSPESPSN 195
           QEM+EAR+   DV++DW++L ELLLCYL +NP +THKFI+ AF+D+VV LL SSP+S S+
Sbjct: 162 QEMIEARNL-TDVKKDWEFLHELLLCYLTLNPQNTHKFIINAFADIVVCLLSSSPDSDSH 221

[Close]
BLAST of Carg23520 vs. TrEMBL
Match: tr|N1NJM5|N1NJM5_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=ARAX_AHF417E07-002 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.7e-23
Identity = 59/107 (55.14%), Postives = 76/107 (71.03%), Query Frame = 0 

Query: 81  RFXXXXPGCSNSIFDSSPETHHGAAAVHGGVKVRKVSIDPFIDFRGSMQEMVEARDQPVD 140
           RF    PG SNSI + SP+T   A+   GGVKV K S+DP++DF  SMQEM+ +R + +D
Sbjct: 72  RFFFSSPGTSNSIIE-SPDTR--ASIPSGGVKVPKYSVDPYVDFFRSMQEMIASRRRGLD 131

Query: 141 VRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVSLLESSPESPS 188
           V +DW YL +LLLCYL +NP  TH++I+RAF+DLVV LL SS   PS
Sbjct: 132 VNKDWDYLHDLLLCYLALNPSHTHRYIVRAFTDLVVDLLSSSSSLPS 175

[Close]
BLAST of Carg23520 vs. TrEMBL
Match: tr|A0A2I4G8Z1|A0A2I4G8Z1_9ROSI (transcription repressor OFP12-like OS=Juglans regia OX=51240 GN=LOC109005775 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.1e-23
Identity = 66/132 (50.00%), Postives = 84/132 (63.64%), Query Frame = 0 

Query: 80  HRFXXXXPGCSNSIFDS-----SPETHHGAAAVHGGVKVRKVSIDPFIDFRGSMQEMVEA 139
           HRF    PG SNSIF+S      PE     A V G VKV K S+DP+IDFR SMQEM EA
Sbjct: 85  HRFFFPSPGRSNSIFESLDAGQDPEN----ALVKGSVKVPKYSLDPYIDFRRSMQEMAEA 144

Query: 140 RDQPVDVRRDWQYLQELLLCYLQINPIDTHKFILRAFSDLVVSLL--ESSPESPSNHHLR 199
           R+   DV R+W+YL ELLLCYL +NP  TH++I+RAF+DLV+ +L   SSP   + +H R
Sbjct: 145 RNL-TDVTREWEYLHELLLCYLTLNPKHTHRYIIRAFADLVICILSSSSSPTFSAANHCR 204

Query: 200 QHNMNSNSWLVQ 205
           +       ++ Q
Sbjct: 205 ESKNRRQRYISQ 211

The following BLAST results are available for this feature:
BLAST of Carg23520 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956079.11.4e-8487.75transcription repressor OFP12-like [Cucurbita moschata][more]
XP_023528062.11.2e-8397.10transcription repressor OFP12-like [Cucurbita pepo subsp. pepo][more]
XP_022979427.19.4e-6886.47transcription repressor OFP12-like [Cucurbita maxima][more]
XP_008438677.12.1e-6766.34PREDICTED: transcription repressor OFP12-like [Cucumis melo][more]
KGN56982.11.8e-6682.93hypothetical protein Csa_3G146670 [Cucumis sativus][more]
BLAST of Carg23520 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G05420.17.1e-1750.00ovate family protein 12[more]
AT4G14860.11.5e-1453.25ovate family protein 11[more]
AT2G32100.17.3e-1455.22ovate family protein 16[more]
AT1G79960.17.6e-1139.02ovate family protein 14[more]
AT2G36050.19.2e-0931.73ovate family protein 15[more]
BLAST of Carg23520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4I8R6|OFP12_ARATH1.3e-1550.00Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1[more]
sp|O23341|OFP11_ARATH2.7e-1353.25Transcription repressor OFP11 OS=Arabidopsis thaliana OX=3702 GN=OFP11 PE=2 SV=1[more]
sp|Q9SKY9|OFP16_ARATH1.3e-1255.22Transcription repressor OFP16 OS=Arabidopsis thaliana OX=3702 GN=OFP16 PE=2 SV=1[more]
sp|Q9S7T5|OFP14_ARATH1.4e-0939.02Transcription repressor OFP14 OS=Arabidopsis thaliana OX=3702 GN=OFP14 PE=1 SV=1[more]
sp|Q9SJ45|OPF15_ARATH1.7e-0731.73Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1[more]
BLAST of Carg23520 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AXN5|A0A1S3AXN5_CUCME1.4e-6766.34transcription repressor OFP12-like OS=Cucumis melo OX=3656 GN=LOC103483710 PE=4 ... [more]
tr|A0A0A0L8Q1|A0A0A0L8Q1_CUCSA1.2e-6682.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146670 PE=4 SV=1[more]
tr|A0A1R3ISZ9|A0A1R3ISZ9_9ROSI2.7e-2351.59Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21485 PE=4 SV=1[more]
tr|N1NJM5|N1NJM5_ARAHY4.7e-2355.14Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=ARAX_AHF417E07-002 PE=4 S... [more]
tr|A0A2I4G8Z1|A0A2I4G8Z1_9ROSI6.1e-2350.00transcription repressor OFP12-like OS=Juglans regia OX=51240 GN=LOC109005775 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR038933Ovate
IPR006458Ovate_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045892 negative regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23520-RACarg23520-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006458Ovate protein family, C-terminalTIGRFAMTIGR01568TIGR01568coord: 112..179
e-value: 5.4E-27
score: 91.9
IPR006458Ovate protein family, C-terminalPFAMPF04844Ovatecoord: 117..178
e-value: 3.3E-21
score: 75.0
IPR006458Ovate protein family, C-terminalPROSITEPS51754OVATEcoord: 113..177
score: 17.52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..204
NoneNo IPR availablePANTHERPTHR33057:SF21TRANSCRIPTION REPRESSOR OFP11-RELATEDcoord: 1..194
IPR038933Ovate protein familyPANTHERPTHR33057FAMILY NOT NAMEDcoord: 1..194

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg23520Cla014773Watermelon (97103) v1carwmB0847
Carg23520Cla021625Watermelon (97103) v1carwmB0849
Carg23520Cla009415Watermelon (97103) v1carwmB0850
Carg23520Csa3G146670Cucumber (Chinese Long) v2carcuB0865
Carg23520MELO3C006531Melon (DHL92) v3.5.1carmeB0839
Carg23520ClCG06G006250Watermelon (Charleston Gray)carwcgB0822
Carg23520ClCG09G007180Watermelon (Charleston Gray)carwcgB0820
Carg23520CSPI03G13120Wild cucumber (PI 183967)carcpiB0884
Carg23520Cucsa.254320Cucumber (Gy14) v1carcgyB0970
Carg23520CmaCh17G011870Cucurbita maxima (Rimu)carcmaB1176
Carg23520CmaCh17G002300Cucurbita maxima (Rimu)carcmaB1175
Carg23520CmaCh14G017080Cucurbita maxima (Rimu)carcmaB1174
Carg23520CmaCh06G014110Cucurbita maxima (Rimu)carcmaB1177
Carg23520CmoCh17G011650Cucurbita moschata (Rifu)carcmoB1144
Carg23520CmoCh06G014120Cucurbita moschata (Rifu)carcmoB1145
Carg23520CmoCh14G017510Cucurbita moschata (Rifu)carcmoB1142
Carg23520Lsi05G016050Bottle gourd (USVL1VR-Ls)carlsiB772
Carg23520Lsi09G013150Bottle gourd (USVL1VR-Ls)carlsiB770
Carg23520Lsi02G022810Bottle gourd (USVL1VR-Ls)carlsiB771
Carg23520Cp4.1LG08g04020Cucurbita pepo (Zucchini)carcpeB1184
Carg23520Cp4.1LG03g10610Cucurbita pepo (Zucchini)carcpeB1183
Carg23520CsGy3G013270Cucumber (Gy14) v2carcgybB0838
Carg23520MELO3C006531.2Melon (DHL92) v3.6.1carmedB0850
Carg23520CsaV3_3G013290Cucumber (Chinese Long) v3carcucB0889
Carg23520Cla97C05G086340Watermelon (97103) v2carwmbB0883
Carg23520Cla97C06G115750Watermelon (97103) v2carwmbB0884
Carg23520Cla97C09G169780Watermelon (97103) v2carwmbB0886
Carg23520Bhi01G000584Wax gourdcarwgoB0988
Carg23520Bhi09G000895Wax gourdcarwgoB0990
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg23520Carg07259Silver-seed gourdcarcarB134
Carg23520Carg17419Silver-seed gourdcarcarB545
The following block(s) are covering this gene:
GeneOrganismBlock
Carg23520Watermelon (Charleston Gray)carwcgB0821