Cp4.1LG08g03130 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGACATAAAGTAAGTTGAACTAAGAGGGAGTAGTAACAATCCCAATACTCAGCACGTTTAGAATGGCCGCAACAATTTCTGCAAANGTCAATACTCAGCACGTTTAGAATGGCCGCAACAATTTCTGCAAAATGGAGATTATCATCATCAACATGGTTGAATTTGAGCCAAAATTTCAACCCGAAATTCCGAGCTCAGCGCTGCAATCGGAGCTTCTTCCTTCCTGCTTTCGCCGCCAATCACTCATGCCGCCGCCACTTTCCTCCAAAGCCCTCTTCATTTCCAATGGCTATGGCCAATTTCTCCTCCGCCGCCTCTGCCCGCCGGGCTCGCCTCCGGGGGGTAATCTTCGACATGGACGGAACTCTGACAGTACCTGTCATCGATTTCGCTGCTATGTATAAATCCGTGCTTGGCGATGAGGATTACGCGAGAATCAAATCTCTAAACCCATCGGGAATCGATATCTTGCACATAATTCAGAGTTGGGCACCGGAGAAGCAGCGGAGGGCGTATGAGGTAATCGCCGATTTCGAACGCCAGGGAATCGAACGCCTGCAAATTATGCCCGGTCAGTACAGGGCTTAACTTCTTCTGATTTCAACGATTCTGATCGCTAACGCATTTGTCTCAGCTGCTTAAATAGATGGGAGAATTTACCCGTCCAGATTCCATGTTACTTGGTAATGTGTTCAACCAAATTCTTGATGATTATACGTGCAGGTGCTGCAGAGCTTTGTACATTTCTTGATTCCAAGAATATAAGGTAAACAGTTTCTTGTTCTTCTTCTTTCATTTCTCTCATTGATCATGCGCCGATATGTTATTGTAACATAATTAAACGTTGGTAGAATCATAAACACACTGATAGTTCTTTTGAACTTATTTGGGAAGATGCTGAACTGAAATTTTGCTATTTACTGCATATGAGTTTCAAACAGACTGATTGATATATTTGTGGATTCAAGTTGTTTGGGCTCTAGAAAAGAATTTAAGATGCTAAATAGCACGATTTTGCTGCTCCCCATGGCTAGGATTATTGTTCTGCAAACGCCTGTGGAGATGACTTTGCTTTCTGTATCCCTTTTCTGTGTTCATAAGTTCATATGTTATCCTTTGCACCATGTCAGGAGGGGACTAATCACTCGTAATGTAAAGGAAGCTGTTGATATTTTTCATAAGCGTTTTGGTGTAAGTTTACTGAAGTTTCTTGTAAGGCTATCTGTTATGTTCTTGATTTGCAGCTATACTCTTATATTGTTATGTTTTGGAATTGGTGTCAGTTGAGCTTTAAGGATATTGCCTGTTCATAGAGAGTTTGACGTTCAAATATGTTGATTGAATTGAATTAAATTAGTCTTCCTATAACGGCCCAAGCTCACCGCTAGCTCATATTGTCCTTTTTGGGCTTTCCCTTTCGGGAATCCTTTCAAGATCTCTAAAACCCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTTAGTCTCCTCCCAGACCGAAGTAGGATCTCACAATCCACCTCCTATTCGGGGTCTAGCATCCTTGCTGGCACATCGCCTCGTGTCCACCCCCCTTCAGGGCTCAATCTCTTCACTGGCACATCGCCCGGTGTCTGGCTCTGATACCAACTATAATGGTCCAAGCCCACCACTAGCAGATATTGTGCTTTTTAAGCTTTCCCTTTCAAGCTTCCCCTCAAGTTTTTTAAAACGCGTCTGCTAGAGAGAAGTTTTCATACCCTTATAAAGAATGCTTCGTTCTCCTCCTCAACTGATGTAGGATTTCACAATCCACCTCCCTTTGGGGCTCAACGTCCTTGCTGGCACACTGCCTCGTGTCCACCCCTATTCAGGGCTCAATCTCTTCACTGGCACATGTTTAGCTCTGATGCCAACTATAGCGGCCGAAGTCCACCACTAGCAGATATTGTCCTCTTTGGGCTTCTCCTTAAGGTTTTTAAAACGCGTCTGCTAGGAAGAGGTTTTCACACCCTTATAAAGAATACTTCGTTGTTCTCCCCAACCGATATGAGATCTCACCATTCCACTGCAATAGAATGATGGATTGAGCTTAACTACTAAGCGCGTGAGATTTCTCCTAATCACAACTGCCATAATACAATTTCTTAGAGCTTACATTAACTCGAATAATGCTTGGATCCCGAGTCAGACGGTTAGGAGATTATTTCATCTGTCTTGTTCAGGTATCGCATTAGCTCCGCCACTCTTATTTACTCTTTAGGACGATAGTATGTAGAAAATTTCAGAGTCTCTAAGAAGTTCTCTCTGTTGATGTATCACCCCTTTGAGCATTATTTGCATACGCTGGCTTCATTGCATGCCTTGGGTTCCTCTCAGTTGCTAGCCCAGATTGCTATTTTCTAAGAAATTGAGGTATTTCTAGCTTTACAGACATCTGGGCTTTAAATTGTTGTCCTTTTATTCATCTTCATGTAATATCTTGCAAACCACTTCTTTTAGAGAACTCTAAGAGCCCTTAAAAGTCTATGCCCCATCATACTCGATTGGATTTGGAAAGATAGATGCCCAAGAAAGAGTGAAATATTCATATGGGAGCTAATGATGGGTAGTATAGATAACCCAAGAGGCCAAAACAGAAGCTGAAAAAAGATCCTTAATCTCTAATTGCTCCTCGATGAAAAACCACCTTCGTTTTCACCGTCGAGCCTCTGGATTTTGCTCCTCTCGAATCACCTGAACTTTCTTGCTCCTCAGAGATTATCCATTCAAGGAAGCTGAAGTCCTTTGGTTGAATTCTGCACGAGCTTTCCTTTCATGAAACAAAAGAACAAAAGTGTTAGATCTGGAGAGGGGAGCAAAACATTTTTTATAAAGGTGTGGAAACCTCTCCCAAGCAGTGTTTTAAAGCCCGAAAGGAAAAGCCTAAAGAGGACAATATCTACTATAAGGTTGTGGGAACCTCTCCCTAGCGTACGCGTTCTAAAAATCTTGAGGGAAAGCCCGAACCCAAAGAGGACAATATCTGTTATATGGGTGTGGAAATCTCTCCCTAACAGACACGTTTCAAAAACCTCGAAGGAAAACCCAAAAGAGAAAGCTCAAAGAAGACAATATCTACTGCGGTAGACTTGGGCTGTTACAAAAAGGGTCTTCTTTGATTCCGAAAAATCTCTCTTTTTCTAGGATACGGATATTCGTTGTTGTAAGCTTATGCTACCAGATATAGTACATTATATATGTTTACCGTGTATCCTCATGAAGCCCTCATGTTCTTTCACTTGCTATGGCCGCAGTGGACATTTCATCCAGCATTAAGCAGGGAATTTGGTTCATATAAACCAAATCCCGCTCCGCTACTTCATATCTGCTCTTCTTGGGACGTCCTACCTAACCAAGTCATTATGGTTGGCGATAGCCTCAAAGATGATGTGAGTGTATTCTTTTTTATTATTCATTAGGTTTTCAACCAAGATGATGATCTTGGTACATTTATAGTTTTCCCTTACATGTGAAAGATTGACTTCCTCTCCTATCATACAGATTGGATGTGGCAAGCAAGCGGGAGCGTTCACATGTTTGCTAGACGAAACAGGAAGGTACAACTCGGAGCATTATGCCAACACGGATCTTGAACCAGATTTTAAAGCATCTACGCTTGGTGAAGTTCTTCATCTTTTGAAGGCGAATTTTGAGTTGACACCATGATCCCGACTCTTGGAGATGGTAGAAGACGTATTGATGGATTTCGTGAAAAAGGAAAAATAAGTTCCGAAGTTGGTTTGAGTGATTAGGATTTTACTTGAAAGTTGAGTCATTTGTAGAACGAAAAGAAGGGACTGGAATTCTTCTACAACAAATGTATCAATAAAAATCTTTAAACTAAT TGGACATAAAGTAAGTTGAACTAAGAGGGAGTAGTAACAATCCCAATACTCAGCACGTTTAGAATGGCCGCAACAATTTCTGCAAANGTCAATACTCAGCACGTTTAGAATGGCCGCAACAATTTCTGCAAAATGGAGATTATCATCATCAACATGGTTGAATTTGAGCCAAAATTTCAACCCGAAATTCCGAGCTCAGCGCTGCAATCGGAGCTTCTTCCTTCCTGCTTTCGCCGCCAATCACTCATGCCGCCGCCACTTTCCTCCAAAGCCCTCTTCATTTCCAATGGCTATGGCCAATTTCTCCTCCGCCGCCTCTGCCCGCCGGGCTCGCCTCCGGGGGGTAATCTTCGACATGGACGGAACTCTGACAGTACCTGTCATCGATTTCGCTGCTATGTATAAATCCGTGCTTGGCGATGAGGATTACGCGAGAATCAAATCTCTAAACCCATCGGGAATCGATATCTTGCACATAATTCAGAGTTGGGCACCGGAGAAGCAGCGGAGGGCGTATGAGGTAATCGCCGATTTCGAACGCCAGGGAATCGAACGCCTGCAAATTATGCCCGGTGCTGCAGAGCTTTGTACATTTCTTGATTCCAAGAATATAAGGAGGGGACTAATCACTCGTAATGTAAAGGAAGCTGTTGATATTTTTCATAAGCGTTTTGGTTGGACATTTCATCCAGCATTAAGCAGGGAATTTGGTTCATATAAACCAAATCCCGCTCCGCTACTTCATATCTGCTCTTCTTGGGACGTCCTACCTAACCAAGTCATTATGGTTGGCGATAGCCTCAAAGATGATATTGGATGTGGCAAGCAAGCGGGAGCGTTCACATGTTTGCTAGACGAAACAGGAAGGTACAACTCGGAGCATTATGCCAACACGGATCTTGAACCAGATTTTAAAGCATCTACGCTTGGTGAAGTTCTTCATCTTTTGAAGGCGAATTTTGAGTTGACACCATGATCCCGACTCTTGGAGATGGTAGAAGACGTATTGATGGATTTCGTGAAAAAGGAAAAATAAGTTCCGAAGTTGGTTTGAGTGATTAGGATTTTACTTGAAAGTTGAGTCATTTGTAGAACGAAAAGAAGGGACTGGAATTCTTCTACAACAAATGTATCAATAAAAATCTTTAAACTAAT ATGGCCGCAACAATTTCTGCAAAATGGAGATTATCATCATCAACATGGTTGAATTTGAGCCAAAATTTCAACCCGAAATTCCGAGCTCAGCGCTGCAATCGGAGCTTCTTCCTTCCTGCTTTCGCCGCCAATCACTCATGCCGCCGCCACTTTCCTCCAAAGCCCTCTTCATTTCCAATGGCTATGGCCAATTTCTCCTCCGCCGCCTCTGCCCGCCGGGCTCGCCTCCGGGGGGTAATCTTCGACATGGACGGAACTCTGACAGTACCTGTCATCGATTTCGCTGCTATGTATAAATCCGTGCTTGGCGATGAGGATTACGCGAGAATCAAATCTCTAAACCCATCGGGAATCGATATCTTGCACATAATTCAGAGTTGGGCACCGGAGAAGCAGCGGAGGGCGTATGAGGTAATCGCCGATTTCGAACGCCAGGGAATCGAACGCCTGCAAATTATGCCCGGTGCTGCAGAGCTTTGTACATTTCTTGATTCCAAGAATATAAGGAGGGGACTAATCACTCGTAATGTAAAGGAAGCTGTTGATATTTTTCATAAGCGTTTTGGTTGGACATTTCATCCAGCATTAAGCAGGGAATTTGGTTCATATAAACCAAATCCCGCTCCGCTACTTCATATCTGCTCTTCTTGGGACGTCCTACCTAACCAAGTCATTATGGTTGGCGATAGCCTCAAAGATGATATTGGATGTGGCAAGCAAGCGGGAGCGTTCACATGTTTGCTAGACGAAACAGGAAGGTACAACTCGGAGCATTATGCCAACACGGATCTTGAACCAGATTTTAAAGCATCTACGCTTGGTGAAGTTCTTCATCTTTTGAAGGCGAATTTTGAGTTGACACCATGA MAATISAKWRLSSSTWLNLSQNFNPKFRAQRCNRSFFLPAFAANHSCRRHFPPKPSSFPMAMANFSSAASARRARLRGVIFDMDGTLTVPVIDFAAMYKSVLGDEDYARIKSLNPSGIDILHIIQSWAPEKQRRAYEVIADFERQGIERLQIMPGAAELCTFLDSKNIRRGLITRNVKEAVDIFHKRFGWTFHPALSREFGSYKPNPAPLLHICSSWDVLPNQVIMVGDSLKDDIGCGKQAGAFTCLLDETGRYNSEHYANTDLEPDFKASTLGEVLHLLKANFELTP
BLAST of Cp4.1LG08g03130 vs. Swiss-Prot
Match: GPPL3_ARATH (Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 OS=Arabidopsis thaliana GN=At2g33255 PE=1 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 9.8e-91 Identity = 153/232 (65.95%), Postives = 196/232 (84.48%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. Swiss-Prot
Match: YOR31_YEAST (Putative uncharacterized hydrolase YOR131C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR131C PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.7e-24 Identity = 73/213 (34.27%), Postives = 110/213 (51.64%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. Swiss-Prot
Match: GPH2_PSEAE (Phosphoglycolate phosphatase 2 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph2 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.2e-09 Identity = 47/186 (25.27%), Postives = 82/186 (44.09%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. Swiss-Prot
Match: GPH_PSYA2 (Phosphoglycolate phosphatase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=Psyc_2124 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.7e-08 Identity = 63/227 (27.75%), Postives = 90/227 (39.65%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. Swiss-Prot
Match: GPH_NITOC (Phosphoglycolate phosphatase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=Noc_2493 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07 Identity = 53/219 (24.20%), Postives = 92/219 (42.01%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. TrEMBL
Match: A0A0A0L845_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133970 PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 3.1e-115 Identity = 205/243 (84.36%), Postives = 219/243 (90.12%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. TrEMBL
Match: A0A0D2UVD5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G180400 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 1.3e-97 Identity = 178/265 (67.17%), Postives = 210/265 (79.25%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. TrEMBL
Match: A0A0B0NKV3_GOSAR (Hydrolase OS=Gossypium arboreum GN=F383_02416 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 7.1e-96 Identity = 173/251 (68.92%), Postives = 203/251 (80.88%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. TrEMBL
Match: A0A0D2VNQ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G180400 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 7.8e-95 Identity = 176/265 (66.42%), Postives = 208/265 (78.49%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. TrEMBL
Match: M5XZX4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010354mg PE=4 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 5.6e-93 Identity = 165/237 (69.62%), Postives = 204/237 (86.08%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. TAIR10
Match: AT2G33255.1 (AT2G33255.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 334.7 bits (857), Expect = 5.5e-92 Identity = 153/232 (65.95%), Postives = 196/232 (84.48%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. NCBI nr
Match: gi|659075987|ref|XP_008438438.1| (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 [Cucumis melo]) HSP 1 Score: 425.6 bits (1093), Expect = 6.8e-116 Identity = 206/242 (85.12%), Postives = 220/242 (90.91%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. NCBI nr
Match: gi|449432486|ref|XP_004134030.1| (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 [Cucumis sativus]) HSP 1 Score: 422.9 bits (1086), Expect = 4.4e-115 Identity = 205/243 (84.36%), Postives = 219/243 (90.12%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. NCBI nr
Match: gi|823247041|ref|XP_012456194.1| (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 [Gossypium raimondii]) HSP 1 Score: 364.4 bits (934), Expect = 1.8e-97 Identity = 178/265 (67.17%), Postives = 210/265 (79.25%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. NCBI nr
Match: gi|728832981|gb|KHG12424.1| (hydrolase [Gossypium arboreum]) HSP 1 Score: 358.6 bits (919), Expect = 1.0e-95 Identity = 173/251 (68.92%), Postives = 203/251 (80.88%), Query Frame = 1
BLAST of Cp4.1LG08g03130 vs. NCBI nr
Match: gi|763805537|gb|KJB72475.1| (hypothetical protein B456_011G180400 [Gossypium raimondii]) HSP 1 Score: 355.1 bits (910), Expect = 1.1e-94 Identity = 176/265 (66.42%), Postives = 208/265 (78.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |