Carg16526 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATAATGAGGTTGTCGTCATCAGGATGGTTGAATTTGAAATGGAGCCCAGTATTCAACCCGATATGTCGGGCTGCGGGCCGCAATCGGATCTTCCTCCTGTCTGCTTTCTCCACCATTCACTCAACGCTATCACTTTACTCATCATGCCACCACCCCTCTTCTCCGCACCGCTATTCATTTCCCATGCCCAATTTCTCCTCTACCGTCTCTGCCCCCCGGGGGCGCCTCCGGGGGGTGGTCTTCGACATGGACGGAACCCTCACAGTACCCGTCATTGATTTCGCTGCTATGCATAAATCTGTGCTCGGCGATGAGGAGTATGTCAGAATTAAATCTTTAAACCCATCAGGAATCGATATTTTGCACATTATTCAGAGCTGGGCGCCCGAGAAGCAGCGGAGGGCGTATGAGGTAATCGCCGATTTCGAGCGCCAGGGAATTGACCGCCTGCAAATTATGCCCGGTCAGTACCGGGCTGGCTTAGCTTCTTTGAGCTTCTAGCGTTCTTTCCACCCCCCCCCCCCCCCCCCCCCCAATTTATCATGTGTTTTAGATTACCCTGTGTTGATTTGATTGTTTTTCTCTACAAGTTTCTAATCGCTAACACCCTTGTCTCAACAGCTTAAATAGATGAGGGATTTTACTCTTCAGATTCATGTTACTTTTATTGTGAAAAGTTAGGTCTTTGGCTATCTCAACCAAATTCTTGATGATTATACGTGCAGGTGCTGCGGAGCTTTGTACCTTTCTCGATTCCAAGAATATAAGGTAAACAGTTTCTTCTTCTTCTTCTTCTTCTTCCTTCACTGTAACTTATGGTGGCTTGCATTTTGTAACCATCTTGTCTGCCAGCTCTTTCCTTAACTGTAGTTGAGCTACTGTTCTCTCGTGAATCATGTGCAGCTATGTTCCTGTGACAGAACTAAAAGTTGGTTGAATCATACCCCTCCCCCAACCCACACAAAACACACATGGTGGTGCCTTTTAATTTATCTGGAAAGAAAGAAAAAAAGAAACAAGTGGAAGAGGAGGAGAAGGAAGATAAAGTTTCAACATAATGTGATTCTTGTAAATTTATCTAGTATAGTCTCATTAGAATATCTCGGGTGTCCTGTGAATTTATTAGAAAATAGATGTTAAAGTGAATTTTCAGAATTTACTGCATATGGGTTTGAACCAAACTAATTGATCAATTTGTGTCTACTCCGATGTTCAAGTTATTTGATGTTTACAAAAGAATTAAAGATAATAAACAGAAAAATTGTGCACTTGCGCAATAGCTAGATTCGTTGTTGTGCATATGATGTGGTAATATCTTTACTTTCTGTTTCCTTTTTTGTATTTATAATGTCAATATGTTACATTTCAGGAGGGGATTAATTACTCGCAATATAAAGGAAGCTGTCGATATTTTTCATCAGCGTTTTGGTGTAAGTTCGATTTTTCTTACAACACTCTCTGCAAATTTTAATTGCAATTTACAGCTAAATTTGATTTTTCTTGTAAGGCTCTCTGCTAATTATAGTTACAATTTACAGCTATCTGTTATGTTTTTAATTTTCAGACTTGCAGCTGGATTCTTTCTTGTTATGTTTGGAATTGGAGTAAATTTTGAGCTTTTAATTCGTTCCCCAATATAGTCTTCCATTGCAATAGAATGAGAAACTAAAAACATGAGATTTCTCCTTATCACAACCACAATAGTGCATTTTCTTAGAGCTTACGATACTCTAATAAGGCTTTCATCCTCATTCAACCAGTAGGCTCTTGATTTCATCTGTCTTGTTCGGGCATCCTAATATGAACTGAGCTGTCTTGATCATTCCATTAGCTCCAACACTCGTTGTTACCTTCTTGGGGCATTAGTACATAGGAAATTTCAGTCTCTAAGAAGGCCCCTCTGTAGATGTTTCACCCTAACATTATTTGTATAGACTGGCTGCATTTCACGTCTTGGGTTACTAGCAGCCTCTCGGTAAATCGCTACGGGCCTATGGTCTTAGAAATTAAGGTCTTTCTAGCTTCTTCTGACATCTGGGCTTTTCAGTACTCTAGTTCACCTAATGTGAAAAATTCCCCTTCTATTTATCTTCTCTCTCCCTGTGTATTTTCTTGCTCATAGGGGTATCTGTTCAAGAAGCAAGCTAAATTCTATGGTTGAATTTTGCTGGTGTTTTTCTTTGGGCTTCATGGAACGATAGAACAAAATGATCTTCTTTGATTAGGAAGAATCTCTTCGTTTTTTGTGGGATCAAACACTTTTTTAGATATCTCTCATTGTAAACTTATACTAGCACATCTGTTTGTTCCAAAATATGGACAACTAAACTTTTTCTTACTATTGCTGCAGTGGACATTTCATCCAGCATTAAGCAGGGAATTTGGTTATTATAAACCAAATCCCGCTCCCCTACTTCATATCTGCTCTTCTTGGGATGTCCTGCCTAATGAAGTAATTATGATCGGCGATAGCCTCAGAGATGACGTGAGTGTATCGTTTTCTGTTTGGCTTTCAACGGATTTACTCTTTTCTAGTCCATTCGTTCATACGTCTTGGTTTCTTATAATTCAGGTTGGATGTGGGAAGCAAGCAGGAGCTTTCACATGTTTGCTAGACGAAACAGGACGGTACAACTCGGACCATTACGCCAACATGGATCTGGAGCCAGATTTTAAAGTATCAACGCTGGGTGAAGTTCTTCATCTTTTGAATGCAAATTTTGAGTTGGCCCCATGAGTTTGAATAAAAAGGCAAAATAAATTCCAAGTTTGTCTGGGTGATTATGATTTAACTTGAAAGTTGAGTCATTTGAGATGGGAATTTGTTTGGGACTGAAAACCAGAGATGTTGGTTCTTCTTGTAATTTAAACATTTAATGGTGAGTTGGAAACAAGTTATGAAGATCGATCATCATATCAAGCAATTTTAGCAGCCTCTCCTCTCTTTATCATGTTCTTCCATTGTTTTTCTCTCTTTGTCCAAGAAATTTTAGATGCATTTAAGGGGCTGTAGGAAAATTAAGGATATAAGTGATCATTTTTTACTTTTGCTGGATGAAAGTGTCCACATTGGTTAATTTAAGGAATGGTCATGAGTTTATAATCTAAGAATACACTCT ATGGGGATAATGAGGTTGTCGTCATCAGGATGGTTGAATTTGAAATGGAGCCCAGTATTCAACCCGATATGTCGGGCTGCGGGCCGCAATCGGATCTTCCTCCTGTCTGCTTTCTCCACCATTCACTCAACGCTATCACTTTACTCATCATGCCACCACCCCTCTTCTCCGCACCGCTATTCATTTCCCATGCCCAATTTCTCCTCTACCGTCTCTGCCCCCCGGGGGCGCCTCCGGGGGGTGGTCTTCGACATGGACGGAACCCTCACAGTACCCGTCATTGATTTCGCTGCTATGCATAAATCTGTGCTCGGCGATGAGGAGTATGTCAGAATTAAATCTTTAAACCCATCAGGAATCGATATTTTGCACATTATTCAGAGCTGGGCGCCCGAGAAGCAGCGGAGGGCGTATGAGGTAATCGCCGATTTCGAGCGCCAGGGAATTGACCGCCTGCAAATTATGCCCGGTGCTGCGGAGCTTTGTACCTTTCTCGATTCCAAGAATATAAGGAGGGGATTAATTACTCGCAATATAAAGGAAGCTGTCGATATTTTTCATCAGCGTTTTGGTTGGACATTTCATCCAGCATTAAGCAGGGAATTTGGTTATTATAAACCAAATCCCGCTCCCCTACTTCATATCTGCTCTTCTTGGGATGTCCTGCCTAATGAAGTAATTATGATCGGCGATAGCCTCAGAGATGACGTTGGATGTGGGAAGCAAGCAGGAGCTTTCACATGTTTGCTAGACGAAACAGGACGGTACAACTCGGACCATTACGCCAACATGGATCTGGAGCCAGATTTTAAAGTATCAACGCTGGGTGAAGTTCTTCATCTTTTGAATGCAAATTTTGAGTTGGCCCCATGAGTTTGAATAAAAAGGCAAAATAAATTCCAAGTTTGTCTGGGTGATTATGATTTAACTTGAAAGTTGAGTCATTTGAGATGGGAATTTGTTTGGGACTGAAAACCAGAGATGTTGGTTCTTCTTGTAATTTAAACATTTAATGGTGAGTTGGAAACAAGTTATGAAGATCGATCATCATATCAAGCAATTTTAGCAGCCTCTCCTCTCTTTATCATGTTCTTCCATTGTTTTTCTCTCTTTGTCCAAGAAATTTTAGATGCATTTAAGGGGCTGTAGGAAAATTAAGGATATAAGTGATCATTTTTTACTTTTGCTGGATGAAAGTGTCCACATTGGTTAATTTAAGGAATGGTCATGAGTTTATAATCTAAGAATACACTCT ATGGGGATAATGAGGTTGTCGTCATCAGGATGGTTGAATTTGAAATGGAGCCCAGTATTCAACCCGATATGTCGGGCTGCGGGCCGCAATCGGATCTTCCTCCTGTCTGCTTTCTCCACCATTCACTCAACGCTATCACTTTACTCATCATGCCACCACCCCTCTTCTCCGCACCGCTATTCATTTCCCATGCCCAATTTCTCCTCTACCGTCTCTGCCCCCCGGGGGCGCCTCCGGGGGGTGGTCTTCGACATGGACGGAACCCTCACAGTACCCGTCATTGATTTCGCTGCTATGCATAAATCTGTGCTCGGCGATGAGGAGTATGTCAGAATTAAATCTTTAAACCCATCAGGAATCGATATTTTGCACATTATTCAGAGCTGGGCGCCCGAGAAGCAGCGGAGGGCGTATGAGGTAATCGCCGATTTCGAGCGCCAGGGAATTGACCGCCTGCAAATTATGCCCGGTGCTGCGGAGCTTTGTACCTTTCTCGATTCCAAGAATATAAGGAGGGGATTAATTACTCGCAATATAAAGGAAGCTGTCGATATTTTTCATCAGCGTTTTGGTTGGACATTTCATCCAGCATTAAGCAGGGAATTTGGTTATTATAAACCAAATCCCGCTCCCCTACTTCATATCTGCTCTTCTTGGGATGTCCTGCCTAATGAAGTAATTATGATCGGCGATAGCCTCAGAGATGACGTTGGATGTGGGAAGCAAGCAGGAGCTTTCACATGTTTGCTAGACGAAACAGGACGGTACAACTCGGACCATTACGCCAACATGGATCTGGAGCCAGATTTTAAAGTATCAACGCTGGGTGAAGTTCTTCATCTTTTGAATGCAAATTTTGAGTTGGCCCCATGA MGIMRLSSSGWLNLKWSPVFNPICRAAGRNRIFLLSAFSTIHSTLSLYSSCHHPSSPHRYSFPMPNFSSTVSAPRGRLRGVVFDMDGTLTVPVIDFAAMHKSVLGDEEYVRIKSLNPSGIDILHIIQSWAPEKQRRAYEVIADFERQGIDRLQIMPGAAELCTFLDSKNIRRGLITRNIKEAVDIFHQRFGWTFHPALSREFGYYKPNPAPLLHICSSWDVLPNEVIMIGDSLRDDVGCGKQAGAFTCLLDETGRYNSDHYANMDLEPDFKVSTLGEVLHLLNANFELAP
BLAST of Carg16526 vs. NCBI nr
Match: XP_022980371.1 (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 [Cucurbita maxima]) HSP 1 Score: 605.5 bits (1560), Expect = 9.3e-170 Identity = 289/290 (99.66%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of Carg16526 vs. NCBI nr
Match: XP_022924791.1 (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 [Cucurbita moschata]) HSP 1 Score: 600.1 bits (1546), Expect = 3.9e-168 Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 0
BLAST of Carg16526 vs. NCBI nr
Match: XP_023528584.1 (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 598.2 bits (1541), Expect = 1.5e-167 Identity = 287/290 (98.97%), Postives = 288/290 (99.31%), Query Frame = 0
BLAST of Carg16526 vs. NCBI nr
Match: XP_022974543.1 (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 [Cucurbita maxima]) HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129 Identity = 232/286 (81.12%), Postives = 245/286 (85.66%), Query Frame = 0
BLAST of Carg16526 vs. NCBI nr
Match: XP_022951041.1 (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 [Cucurbita moschata]) HSP 1 Score: 471.9 bits (1213), Expect = 1.6e-129 Identity = 231/286 (80.77%), Postives = 244/286 (85.31%), Query Frame = 0
BLAST of Carg16526 vs. TAIR10
Match: AT2G33255.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 334.0 bits (855), Expect = 9.5e-92 Identity = 152/230 (66.09%), Postives = 191/230 (83.04%), Query Frame = 0
BLAST of Carg16526 vs. Swiss-Prot
Match: sp|Q8RYE9|GPPL3_ARATH (Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 OS=Arabidopsis thaliana OX=3702 GN=At2g33255 PE=1 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.7e-90 Identity = 152/230 (66.09%), Postives = 191/230 (83.04%), Query Frame = 0
BLAST of Carg16526 vs. Swiss-Prot
Match: sp|Q12486|YOR31_YEAST (Putative uncharacterized hydrolase YOR131C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YOR131C PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 8.1e-24 Identity = 76/219 (34.70%), Postives = 113/219 (51.60%), Query Frame = 0
BLAST of Carg16526 vs. Swiss-Prot
Match: sp|Q88M11|MUPP_PSEPK (N-acetylmuramic acid 6-phosphate phosphatase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) OX=160488 GN=mupP PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.7e-10 Identity = 48/184 (26.09%), Postives = 85/184 (46.20%), Query Frame = 0
BLAST of Carg16526 vs. Swiss-Prot
Match: sp|Q9HZ62|MUPP_PSEAE (N-acetylmuramic acid 6-phosphate phosphatase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=mupP PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.4e-09 Identity = 49/185 (26.49%), Postives = 80/185 (43.24%), Query Frame = 0
BLAST of Carg16526 vs. Swiss-Prot
Match: sp|Q3J8A0|GPH_NITOC (Phosphoglycolate phosphatase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107) OX=323261 GN=Noc_2493 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.8e-08 Identity = 54/220 (24.55%), Postives = 95/220 (43.18%), Query Frame = 0
BLAST of Carg16526 vs. TrEMBL
Match: tr|A0A0A0L845|A0A0A0L845_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133970 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 2.0e-120 Identity = 223/296 (75.34%), Postives = 241/296 (81.42%), Query Frame = 0
BLAST of Carg16526 vs. TrEMBL
Match: tr|A0A1S3AX09|A0A1S3AX09_CUCME (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 OS=Cucumis melo OX=3656 GN=LOC103483534 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 1.1e-118 Identity = 213/248 (85.89%), Postives = 226/248 (91.13%), Query Frame = 0
BLAST of Carg16526 vs. TrEMBL
Match: tr|A0A2I4GSD0|A0A2I4GSD0_9ROSI (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 OS=Juglans regia OX=51240 GN=LOC109010428 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 4.4e-99 Identity = 174/240 (72.50%), Postives = 208/240 (86.67%), Query Frame = 0
BLAST of Carg16526 vs. TrEMBL
Match: tr|A0A0D2UVD5|A0A0D2UVD5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G180400 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.6e-96 Identity = 172/234 (73.50%), Postives = 198/234 (84.62%), Query Frame = 0
BLAST of Carg16526 vs. TrEMBL
Match: tr|A0A2P5FAR6|A0A2P5FAR6_9ROSA (HAD hydrolase, subfamily IA OS=Trema orientalis OX=63057 GN=TorRG33x02_093960 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 2.6e-96 Identity = 168/229 (73.36%), Postives = 200/229 (87.34%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |