Cp4.1LG08g01980 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g01980
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCalcium-binding EF hand family protein
LocationCp4.1LG08 : 2991421 .. 2995103 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAACAAGATGGATAACTTGCATTCCGGGAAAGGAAGGTCGCTTTATTCCAAGTTTCCTTCCGAACAGGAAAAGGAAATGTGTGGCAGAAGCAGAGTATGATTTTTTTTTTTTTTTTAATTTTTTTTTTCAGATACAAAACCTCAGGAAATGATAAATTTCGATATTGTTGCTACTAAGGCGGGCATCTCAATCTTCCTTCACTCGAAGAACCGATTTCAATCACAGTTGGGGGCTGCTTTACGAGGTCTGTGATCTTCAATCGCCGTCGCTGCCGTCTAGTATGGGACAAATCTTGGGGAGATTTGGAGGTAAATTGACCTAACTTCACTTCTCGTATCCTTCGATTTTGAATTCGTTTTCAGTTTTCTGTTTGGATCCGTCGATAAATTGATTTAACGGAACAAGCGAAATGGGGAATGTGTAGTCGTAGAGTAGATTATACCGAGATCGATCTTATTAGTGATATGCGATTAATCTGCAATTCTTCATCGTTAACTGATATTGTCATAGACTTCAACCGATGAATTTATCGGTTTTGTTTCTGGTTTGGAGTGTTAGATTGGCTGATTTGTGCTGTCTCTGTGGATTTGATACCGTGTCTGCTTGCAATTGAGGGAGACAGACAGGATTTTTTATAAGATTAGAGACGGAGCGATGATTAATTGAAATATTTTAAAGCTTTTGTCCCTTCTGTTGCAGGAAAAGAATGGAGGATTAAGAAGTTGAAGACGATATCAGACAGGATATTCGATAAGATCAAAAAACAATCAGATAAGGAGGAGCTGTCATTTGAAGAACTATATATTGCCACGTTACTTGTGTTCAAGTAAGAAGCTCTATTATTTACTTCACATTTTTCCTGCTCCAATTTTTTTGTAGCTCATTCGTTTGTTTATTTATTTATTTATTTACAACTTGGTGTTGGATATCACTCTTTATATTGTGTTCATGATCCATTGCTTTGTGAGAGAATTTGCAAAACCCATGGCTGACGGACAGTAAGAATTGTAAGTTGGTTTTGCAAATTTCCATTCCTTATTTCTTGGTCCTCTAACTAAGAGAATAGAAATGTGTTTGGTAATTTTGTTCTTCCATATTGTAAATTTTTAGACAAAATTATCACATAAAAATGATTTGTTTCGAATGCTAGGGAAGACGCTGAAGAGGGTGAATTGTGAGATCCCACGTCGATTGGGGAGGAGAACGAAACATTGTTTATAAGGGTGTGGTAACCTTTCCCTAGCAGACGCGTTTTAAAACTTTGAGAGGAAGCCCAGGAGGAAAAACCTAAAGAGGACACTATCTCTAGTAGTGGATTTGGGCTAGGGAAGACGCTGAAGAGGGTGGATTGTGAGATCCCACGTCGATTGGGGAGGAGAACGAAACATTTTTTATAAAGGTGTGGAAACCTTTCCCTAACAGACACATTTTAAAACTTTGAGAGGAAGCCTAGGAGGGAAAACCTAAAGAGGACACTATCTCTAGTAGTGGATTTGGGCTCTTAGATATAATGTTTATTATACATTTTACGAGTCAAAATAATAATTTGACGTTTTTTATCTGTTCTTTTTGAAAAAATTGAAAAAAACTTGATCTTGTTGAGAAATTAGAAACAGAAATACTTATCAATTGTCAGTGTTCTTCAAAATCTGGTAATAGAAAACAGGAAACTAGAAAAATAAATGTGATTGAACAAGTCCTGAATTTTCAAACTGGGCTTGAACTTTGATCCTTGGGGATATCTCTTGAACATCTCAAGCTCTTGGTGATCTGATGAGGCATATGTGAACTTGGCTTAACCTGAATAAATACTCATGATGCAGTGATATTAATAAGCTGTTGTCTGGCTCACATCATGATCCGCCTTCAAGGGAACATTTCAAACAACTCATAAAGGTACTCTGTTTATACAATTTATTACAAAGCTTTAAACGATATAAAAAAGTGGCATCTGTTCATGATTGTGAAAACCTAAACTCGTTGGATTGTTCACTTTAGGTCTAATGCTCAGTAATTCTTGTTCTTTACTTGGTGCTAATGAACTTGGCTGAAGTATGGCTATCAACTTGCATGTGGTGCTGCTTGTTTTATTTTCCTATTCCTATTTTGTCATGTTCATCAATAATTTGTGGCTTTATTGAATTGTAGTAGCTTCCCTGCTCTTCCTGTCGCCATGTCCTTCAAAAAAAGAGGTCACTTTTGTTAACAATTTTGTTTTTATGCTTGTTTTTCTTTCGGTTTCTTTACTATGTTTTTCATCCTTCCTTAGAGAAACTTGTCAAATTCCAAAACGAAAAGTAGGTTTTCTAAAACTACTTTTTTGGGTCTGATTATTTGATTTTTGGTGTCGAGATTTTGAAAATTAAGCTTATAGATCTGTAACCGCCCAAGCCCATGCTCAAACCCACCGCTAACAGATATTGTCCATTTTGGCCCCTTACGTAACTCCATCAGCCTTACGGTTTTTAAAACGCATTTGCTAGGGAGAGGTTTTCACACCCTTATAAGGAATGTTTCGTTCGTTCGTCTCTCCAACTAATGTGGAATCTCACGAGATCTTTACTTCTTTTGAGTCTTTTTTTTCTTTTTAATTTTCAAAATCCAAGTCAAGTTTTGAAAATTGAAAATAATAGTGTTTTTAAAACTATGTTTTTGTTTTTAGAATTAGACTAACAATTCAAATGTATCTTTTAAAAAGGGTTAAAACCATCGTAAATAGATGATAAAGAAACAAACATAAATTTTAAAAACCAAATAGTTATGGAATAGAACTTTAGTTTTAAGAACGTAAGTAGATAATACGGATGTGGAAGTAATGTTTATAAGCTTAATTCTAAAAAAAAACCAAATGGTATGAACTTGTGAACAACTAATATATGTAAACACACTTCAAATTTCTGTGCTCATATACCTGCTGATCAACTTAAGCATGCTTGTGGCTCATTGTATTATATCAGGAACACGATCGCAACAAGAACGAAAAAATCGACAATGAAGAATTTTTTGGTTTTATGATGGAGTTGACATCTGAAACGTTCCAATCAGTGAGCCAGAAATTAGTCCTCACTTTGGTGATTGCACCAACCATCGCAGTGTTCACAAAGAAACGTACTGAAGGAGTTCCAGGCGTTGGAAAACTGGTGCAAAAACTCCCCTCTTCAGCATATGCTTCCATTATCACTCTTGCTGCTGTGCTGTTTCAGAGCTCTCAGCAGCCGCTTCTTAAATGATCAGTTGAGACTCCTCTGTTTTCCTTCCTTTGTTTTTTTGCATTTATGTGATTGTGAACTAATGATCACTTGAACTTTGAGTTTGAATTTGAATTTTGTATTTCATGTATTTTGTTTCTGTATATGGCTGTTCATCCTTTTCTTTCCCTTCGTCGAGGTCTCTCCATTCGAACGGATCCGATCATAGTTGTTAAATCATGAGCTCCTCCTAAAGAAACGAGCCGTTCTAACAAGATTTGTGATATGAATACCTTTTCGTTTTGTAGAGATATAAAGAGTTCTTCTAGGATTCTATTTCCTAGTGTCGTGACCAATATGAAGTCGTGCTTCCATAACTCTATAAATATCGCTACTGATCATAGTTGTCTGATAGATTTTGATTGGTTTGAAAAAAAAATATTATTGGGTAAAATGCACTTGTTGGTATATGAAATTTGAACCTGTTTTTAT

mRNA sequence

TGAAACAAGATGGATAACTTGCATTCCGGGAAAGGAAGGTCGCTTTATTCCAAGTTTCCTTCCGAACAGGAAAAGGAAATGTGTGGCAGAAGCAGAGCGGGCATCTCAATCTTCCTTCACTCGAAGAACCGATTTCAATCACAGTTGGGGGCTGCTTTACGAGGTCTGTGATCTTCAATCGCCGTCGCTGCCGTCTAGTATGGGACAAATCTTGGGGAGATTTGGAGGAAAAGAATGGAGGATTAAGAAGTTGAAGACGATATCAGACAGGATATTCGATAAGATCAAAAAACAATCAGATAAGGAGGAGCTGTCATTTGAAGAACTATATATTGCCACGTTACTTGTGTTCAATGATATTAATAAGCTGTTGTCTGGCTCACATCATGATCCGCCTTCAAGGGAACATTTCAAACAACTCATAAAGGAACACGATCGCAACAAGAACGAAAAAATCGACAATGAAGAATTTTTTGGTTTTATGATGGAGTTGACATCTGAAACGTTCCAATCAGTGAGCCAGAAATTAGTCCTCACTTTGGTGATTGCACCAACCATCGCAGTGTTCACAAAGAAACGTACTGAAGGAGTTCCAGGCGTTGGAAAACTGGTGCAAAAACTCCCCTCTTCAGCATATGCTTCCATTATCACTCTTGCTGCTGTGCTGTTTCAGAGCTCTCAGCAGCCGCTTCTTAAATGATCAGTTGAGACTCCTCTGTTTTCCTTCCTTTGTTTTTTTGCATTTATGTGATTGTGAACTAATGATCACTTGAACTTTGAGTTTGAATTTGAATTTTGTATTTCATGTATTTTGTTTCTGTATATGGCTGTTCATCCTTTTCTTTCCCTTCGTCGAGGTCTCTCCATTCGAACGGATCCGATCATAGTTGTTAAATCATGAGCTCCTCCTAAAGAAACGAGCCGTTCTAACAAGATTTGTGATATGAATACCTTTTCGTTTTGTAGAGATATAAAGAGTTCTTCTAGGATTCTATTTCCTAGTGTCGTGACCAATATGAAGTCGTGCTTCCATAACTCTATAAATATCGCTACTGATCATAGTTGTCTGATAGATTTTGATTGGTTTGAAAAAAAAATATTATTGGGTAAAATGCACTTGTTGGTATATGAAATTTGAACCTGTTTTTAT

Coding sequence (CDS)

ATGGGACAAATCTTGGGGAGATTTGGAGGAAAAGAATGGAGGATTAAGAAGTTGAAGACGATATCAGACAGGATATTCGATAAGATCAAAAAACAATCAGATAAGGAGGAGCTGTCATTTGAAGAACTATATATTGCCACGTTACTTGTGTTCAATGATATTAATAAGCTGTTGTCTGGCTCACATCATGATCCGCCTTCAAGGGAACATTTCAAACAACTCATAAAGGAACACGATCGCAACAAGAACGAAAAAATCGACAATGAAGAATTTTTTGGTTTTATGATGGAGTTGACATCTGAAACGTTCCAATCAGTGAGCCAGAAATTAGTCCTCACTTTGGTGATTGCACCAACCATCGCAGTGTTCACAAAGAAACGTACTGAAGGAGTTCCAGGCGTTGGAAAACTGGTGCAAAAACTCCCCTCTTCAGCATATGCTTCCATTATCACTCTTGCTGCTGTGCTGTTTCAGAGCTCTCAGCAGCCGCTTCTTAAATGA

Protein sequence

MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSGSHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQPLLK
Homology
[Close]
BLAST of Cp4.1LG08g01980 vs. TrEMBL
Match: A0A0A0L6I0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126970 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-47
Identity = 102/166 (61.45%), Postives = 132/166 (79.52%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ   R GGKEWR  +L+ IS++IFD+      KE LSFE+LYIATLLVFNDINK L G
Sbjct: 1   MGQAFRRLGGKEWRNTQLENISNKIFDRF----GKERLSFEDLYIATLLVFNDINKYLPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPP ++  K++++  D+N+N  ID EEF  F+ +LTSE+F SVSQ+L++TLV+APT+
Sbjct: 61  QHVDPPKKDRVKEVMEMCDKNQNYAIDREEFLEFVKQLTSESFISVSQRLIITLVVAPTL 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQPLLK 167
           AV TKK TEGVPG+GK+VQK+PSSAYA ++TLAA+LFQ+S+Q LLK
Sbjct: 121 AVVTKKSTEGVPGLGKMVQKVPSSAYALLVTLAALLFQNSRQQLLK 162

[Close]
BLAST of Cp4.1LG08g01980 vs. TrEMBL
Match: A0A061EZ21_THECC (Calcium-binding EF hand family protein OS=Theobroma cacao GN=TCM_025708 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-45
Identity = 93/162 (57.41%), Postives = 131/162 (80.86%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ+L +F GKEWR K+++ ISD++F++IK QS +  L+FE+LYI+ LLV+NDINK L G
Sbjct: 1   MGQVLDKFHGKEWRKKQIRKISDKVFERIKNQSGRATLTFEDLYISILLVYNDINKRLPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPPS+E  + +++E+D N + +ID EEF  F+ +LT++TF  VSQ L++TLV+APT+
Sbjct: 61  PHFDPPSKEQVRSMMQEYDFNLDGEIDQEEFVKFIQQLTTDTFIVVSQGLIVTLVVAPTV 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQ 163
           A+ TKK TEGVPGVGK+VQKLP+S YAS++TLA V FQ+S++
Sbjct: 121 AMATKKATEGVPGVGKVVQKLPNSIYASLVTLAIVWFQTSRE 162

[Close]
BLAST of Cp4.1LG08g01980 vs. TrEMBL
Match: V7AL68_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G038600g PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 89/162 (54.94%), Postives = 126/162 (77.78%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ+  +  GKEWR ++++ I+DR+FDK++ Q + E LSF++LYIA LLV+NDINK + G
Sbjct: 15  MGQVFDKLDGKEWRKRQIRKITDRVFDKVQNQKETENLSFQDLYIAVLLVYNDINKYIPG 74

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPPS+   K++ +  D N +  ID EEFF F++++T++TF  VSQKL++TLV+APT+
Sbjct: 75  PHFDPPSKARVKEVKENCDINLDGDIDREEFFDFILQMTADTFTVVSQKLIVTLVVAPTV 134

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQ 163
           AV TK+ TEGVPGVGKLV+K+P+S YAS++T+AAV FQ   Q
Sbjct: 135 AVATKRATEGVPGVGKLVKKIPNSVYASLVTIAAVWFQKKAQ 176

[Close]
BLAST of Cp4.1LG08g01980 vs. TrEMBL
Match: A0A0B2R1H8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_040722 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.6e-44
Identity = 89/162 (54.94%), Postives = 126/162 (77.78%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ+  +  GKEWR ++++ I+DR+FDK+K Q + ++LSFE+LYIA LLV+NDINK + G
Sbjct: 1   MGQVFDKLEGKEWRQRQIRKITDRVFDKVKNQMETDKLSFEDLYIAVLLVYNDINKYIPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPPS++  +++ +  D N +  ID +EF+ F+M +T++TF  VSQKL++T V+APT+
Sbjct: 61  PHFDPPSKDKVREVKQSCDINLDGDIDRDEFYDFIMIMTADTFTFVSQKLIVTFVVAPTV 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQ 163
           AV TKK TEGVPGVGKLVQK+P+S YAS++T+AAV FQ   Q
Sbjct: 121 AVATKKATEGVPGVGKLVQKIPNSVYASLVTIAAVWFQKKAQ 162

[Close]
BLAST of Cp4.1LG08g01980 vs. TrEMBL
Match: A0A0B2R8M0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_037253 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.7e-44
Identity = 89/162 (54.94%), Postives = 126/162 (77.78%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ+  +  GKEWR ++++ I+DR+FDK+K Q + + LSFE+LYIA LLV+NDINK + G
Sbjct: 1   MGQVFDKLEGKEWRQRQIRKITDRVFDKVKNQIETDNLSFEDLYIAVLLVYNDINKYIPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPPS++  +++ +  D N +  ID +EF+ F++ +T++TF  VSQKL+LTLV+APT+
Sbjct: 61  PHFDPPSKDKVREVKQSCDINLDGDIDRDEFYDFILIMTADTFTIVSQKLILTLVVAPTV 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQ 163
           AV TKK TEGVPGVG+LVQK+P+S YAS++T+AAV FQ   Q
Sbjct: 121 AVATKKATEGVPGVGRLVQKIPNSVYASLVTIAAVWFQKKAQ 162

[Close]
BLAST of Cp4.1LG08g01980 vs. TAIR10
Match: AT1G64850.1 (AT1G64850.1 Calcium-binding EF hand family protein)

HSP 1 Score: 172.2 bits (435), Expect = 2.7e-43
Identity = 84/159 (52.83%), Postives = 118/159 (74.21%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ+  +  GKEWR K+++ I DR+FD+ K Q+ +  L+FEELYIA LLV+NDINK L G
Sbjct: 1   MGQVFNKLRGKEWRHKQVQAICDRVFDRFKMQTGRANLTFEELYIAVLLVYNDINKRLPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPPS++    ++ + D N + ++D EEF  F+ ++T+ETF  VSQ L++ L++APT+
Sbjct: 61  PHFDPPSKDLVNSIMTDCDINLDGELDREEFVKFIEQITAETFNVVSQGLIIALIVAPTV 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQS 160
           A+ TKK TEGVPGVGK+VQKLP+S YAS++TLA +   S
Sbjct: 121 AIATKKATEGVPGVGKVVQKLPTSIYASLVTLAVMWVNS 159

[Close]
BLAST of Cp4.1LG08g01980 vs. NCBI nr
Match: gi|449432301|ref|XP_004133938.1| (PREDICTED: uncharacterized protein LOC101219769 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 3.8e-47
Identity = 102/166 (61.45%), Postives = 132/166 (79.52%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ   R GGKEWR  +L+ IS++IFD+      KE LSFE+LYIATLLVFNDINK L G
Sbjct: 1   MGQAFRRLGGKEWRNTQLENISNKIFDRF----GKERLSFEDLYIATLLVFNDINKYLPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPP ++  K++++  D+N+N  ID EEF  F+ +LTSE+F SVSQ+L++TLV+APT+
Sbjct: 61  QHVDPPKKDRVKEVMEMCDKNQNYAIDREEFLEFVKQLTSESFISVSQRLIITLVVAPTL 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQPLLK 167
           AV TKK TEGVPG+GK+VQK+PSSAYA ++TLAA+LFQ+S+Q LLK
Sbjct: 121 AVVTKKSTEGVPGLGKMVQKVPSSAYALLVTLAALLFQNSRQQLLK 162

[Close]
BLAST of Cp4.1LG08g01980 vs. NCBI nr
Match: gi|502155730|ref|XP_004510171.1| (PREDICTED: uncharacterized protein LOC101493046 [Cicer arietinum])

HSP 1 Score: 192.2 bits (487), Expect = 7.2e-46
Identity = 93/158 (58.86%), Postives = 126/158 (79.75%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQI  +F G+EWR K+++ I+DR+F+K+K Q   E LSFE+LYIA LLV+NDINKL+ G
Sbjct: 1   MGQIFDKFQGEEWRKKQIRQITDRVFEKVKNQIQTENLSFEDLYIAVLLVYNDINKLIPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPPS++  +Q++KE D N +  ID EEFF F+  +T++TF  VSQKL++TLV+APT+
Sbjct: 61  PHFDPPSKDRVRQIMKECDLNLDGVIDREEFFSFIQVMTADTFTVVSQKLIITLVVAPTV 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQ 159
           A+ TK+ TEGVPGVGK+VQKLP++ YAS++TLA V FQ
Sbjct: 121 AMATKRATEGVPGVGKVVQKLPNAVYASLVTLAVVWFQ 158

[Close]
BLAST of Cp4.1LG08g01980 vs. NCBI nr
Match: gi|659075571|ref|XP_008438214.1| (PREDICTED: uncharacterized protein LOC103483388 [Cucumis melo])

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 97/166 (58.43%), Postives = 133/166 (80.12%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ L RF G++W+ K+L+ IS++IFD+      KE+LSFE+LYIATLLVFNDINK L G
Sbjct: 1   MGQALRRFRGQDWKNKQLEMISNKIFDRF----HKEKLSFEDLYIATLLVFNDINKYLPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPP++E   +L+++ D+N+N+ ID +EF  F+  LT E+  SVSQ+L++TLV+APT+
Sbjct: 61  PHIDPPTKERVAELVEKSDKNENQAIDRDEFLKFIKLLTFESIASVSQRLIITLVVAPTL 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQPLLK 167
           AV TK+ TEG+PG+GK+VQK+PSSAYA ++TLAA+LFQ+S Q LLK
Sbjct: 121 AVVTKRSTEGIPGLGKMVQKVPSSAYALLVTLAALLFQNSNQQLLK 162

[Close]
BLAST of Cp4.1LG08g01980 vs. NCBI nr
Match: gi|590640002|ref|XP_007029833.1| (Calcium-binding EF hand family protein [Theobroma cacao])

HSP 1 Score: 190.3 bits (482), Expect = 2.8e-45
Identity = 93/162 (57.41%), Postives = 131/162 (80.86%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ+L +F GKEWR K+++ ISD++F++IK QS +  L+FE+LYI+ LLV+NDINK L G
Sbjct: 1   MGQVLDKFHGKEWRKKQIRKISDKVFERIKNQSGRATLTFEDLYISILLVYNDINKRLPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPPS+E  + +++E+D N + +ID EEF  F+ +LT++TF  VSQ L++TLV+APT+
Sbjct: 61  PHFDPPSKEQVRSMMQEYDFNLDGEIDQEEFVKFIQQLTTDTFIVVSQGLIVTLVVAPTV 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQ 163
           A+ TKK TEGVPGVGK+VQKLP+S YAS++TLA V FQ+S++
Sbjct: 121 AMATKKATEGVPGVGKVVQKLPNSIYASLVTLAIVWFQTSRE 162

[Close]
BLAST of Cp4.1LG08g01980 vs. NCBI nr
Match: gi|645252490|ref|XP_008232148.1| (PREDICTED: uncharacterized protein LOC103331305 [Prunus mume])

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 93/162 (57.41%), Postives = 126/162 (77.78%), Query Frame = 1 

Query: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQSDKEELSFEELYIATLLVFNDINKLLSG 60
           MGQ+L R  GK+WR K++K I+D++FD  K +S +  L+FE+LYI  LLV+NDINK L G
Sbjct: 1   MGQVLDRLQGKQWRRKQIKKITDKVFDHFKNESGRANLTFEDLYIGVLLVYNDINKRLPG 60

Query: 61  SHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPTI 120
            H DPPS++H K L++E+D N + +ID EEF  F+ +LT++TF  VSQ L+LTLV APTI
Sbjct: 61  PHFDPPSKDHVKALLQENDINLDGEIDREEFTKFIKQLTADTFIVVSQGLILTLVAAPTI 120

Query: 121 AVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQ 163
           A+ TK+ TEGVPG+GK+VQ+LP+S YAS++TLA VLFQ + Q
Sbjct: 121 AMATKRATEGVPGIGKVVQRLPNSVYASLLTLAVVLFQQASQ 162

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g01980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g01980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6I0_CUCSA2.7e-4761.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126970 PE=4 SV=1[more]
A0A061EZ21_THECC1.9e-4557.41Calcium-binding EF hand family protein OS=Theobroma cacao GN=TCM_025708 PE=4 SV=... [more]
V7AL68_PHAVU1.6e-4454.94Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G038600g PE=4 SV=1[more]
A0A0B2R1H8_GLYSO3.6e-4454.94Uncharacterized protein OS=Glycine soja GN=glysoja_040722 PE=4 SV=1[more]
A0A0B2R8M0_GLYSO4.7e-4454.94Uncharacterized protein OS=Glycine soja GN=glysoja_037253 PE=4 SV=1[more]
BLAST of Cp4.1LG08g01980 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G64850.12.7e-4352.83 Calcium-binding EF hand family protein[more]
BLAST of Cp4.1LG08g01980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432301|ref|XP_004133938.1|3.8e-4761.45PREDICTED: uncharacterized protein LOC101219769 [Cucumis sativus][more]
gi|502155730|ref|XP_004510171.1|7.2e-4658.86PREDICTED: uncharacterized protein LOC101493046 [Cicer arietinum][more]
gi|659075571|ref|XP_008438214.1|1.6e-4558.43PREDICTED: uncharacterized protein LOC103483388 [Cucumis melo][more]
gi|590640002|ref|XP_007029833.1|2.8e-4557.41Calcium-binding EF hand family protein [Theobroma cacao][more]
gi|645252490|ref|XP_008232148.1|1.4e-4457.41PREDICTED: uncharacterized protein LOC103331305 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009536 plastid
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g01980.1Cp4.1LG08g01980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 70..98
score: 0.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 66..101
score: 11
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 24..105
score: 1.
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 24..105
score: 9.9
NoneNo IPR availablePANTHERPTHR11639S100 CALCIUM-BINDING PROTEINcoord: 12..91
score: 1.8E-17coord: 112..162
score: 1.8
NoneNo IPR availablePANTHERPTHR11639:SF62SUBFAMILY NOT NAMEDcoord: 12..91
score: 1.8E-17coord: 112..162
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g01980Cucsa.257320Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g01980CmaCh14G019600Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g01980CmaCh06G011560Cucurbita maxima (Rimu)cmacpeB854
Cp4.1LG08g01980CmoCh14G020210Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g01980CmoCh06G011870Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g01980Csa3G126960Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g01980MELO3C006222Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g01980ClCG05G002560Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g01980CSPI03G09860Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g01980Lsi05G019270Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g01980MELO3C006222.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g01980CsaV3_3G010000Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g01980Bhi01G000062Wax gourdcpewgoB1111
Cp4.1LG08g01980CsGy3G009950Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g01980Carg06360Silver-seed gourdcarcpeB1333
Cp4.1LG08g01980Carg14858Silver-seed gourdcarcpeB0885
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g01980Cp4.1LG03g17290Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g01980Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g01980Cucurbita pepo (Zucchini)cpecpeB344
Cp4.1LG08g01980Cucumber (Gy14) v1cgycpeB0969
Cp4.1LG08g01980Cucurbita maxima (Rimu)cmacpeB021
Cp4.1LG08g01980Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g01980Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g01980Wild cucumber (PI 183967)cpecpiB879
Cp4.1LG08g01980Cucumber (Chinese Long) v2cpecuB877
Cp4.1LG08g01980Bottle gourd (USVL1VR-Ls)cpelsiB696
Cp4.1LG08g01980Watermelon (Charleston Gray)cpewcgB790
Cp4.1LG08g01980Watermelon (97103) v1cpewmB845
Cp4.1LG08g01980Watermelon (97103) v1cpewmB854
Cp4.1LG08g01980Melon (DHL92) v3.5.1cpemeB791
Cp4.1LG08g01980Cucumber (Gy14) v2cgybcpeB889
Cp4.1LG08g01980Melon (DHL92) v3.6.1cpemedB932
Cp4.1LG08g01980Silver-seed gourdcarcpeB0329
Cp4.1LG08g01980Cucumber (Chinese Long) v3cpecucB1077
Cp4.1LG08g01980Wax gourdcpewgoB1097