Carg06360 (gene) Silver-seed gourd

Overview
NameCarg06360
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCalcium-binding EF hand family protein
LocationCucurbita_argyrosperma_scaffold_016 : 1193318 .. 1197687 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAACTTGCATTCCGGGAAAGGAAGGTCGCTTTATTCCAAGTTTCCTTCCGAACAGGAAAAGGAAATGTGTGGCAGAAGCAGTTTATGATTTTTTGTTTTTTTTTTTTCAGATACAAAACCTCAGGAAATGATAAATTTCGTTATGGTTGCTACTAAGGCGGGCATCTCGATCTTCCTTTACTCGAAGAACCGATTTCAATCACGGTTGGGGGCTGCTTTACGAGGTCTGTGATCTTCAATCGCCGTCGCTGCCGTCTAGTATGGGACAAATCTTGGGGAGATTTGGAGGTAAATTGACCTAACTTCACTTTTCGTATCCTTCGATTTTGAATTCGTTTTCAGTTTTCTGTTTGGATCCGTCGATAAATTGATTAATGGAACAAGCGAAATGGCGAATGCATAGTCACAGAGTAGATCATACCGAGATCGATCTTATTAGTGATATGCGATTAATCTGCAATTCTTCCTCGTTACTGATATTGTCTTAGACTTCAACCGATGAACTTACCGGTTTTGTTTCTTGTTTGGAGTGTTAGATTAGCTGATTTGTGCTGTCTCTGTGGATTTGATACCGTGTCTGCTTGCAATTGAGGGAGACAGACAGGATTTTTTATAAGATTAGAGACGGAGCGATGATTAATTAAAATATTCTTAAGCTTTTGTCCTTTCTGTTGCAGGAGAAGAATGGAGGAAGAAGAAGTTGAAGACGATATCAGACAGGATATTCGAGAAGATAAAAAAAAACAAATCAGCTGAGGAGGAGCTGTCATTTGAAGAATTATATATTGCCACGTTACTTGTGTTCAAGTAAGAAGCTCTATTATTTACTTCACATTTTTCCTGCTCCAATTTTTTTGTTGCTCATTCGTTTGTTTATTTATTTATTTACAACTTGGAGTGGGATATCACTCTTTATATTGTGTTCATGATCCATTGCTTTGTGAGAGAATTTGCAAAACCCATGACTGACGGACAGTAAGAATTGTAAGTTGGTTTGGCAAATTTCCATTCCTTATTTCTTGGTCCTCTAACTAAGAGAATAGAAATGTGTTTGGTAATAATTTCTTGTTCTTCCATATTGTAAATTTTTAGACAAAATTATCACATAAAAACGATTTGTTTCGAATGCTAGGGAAGACTGAAGAGGGTGGATTGTGAGACCCCACGTCGATTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTTTCCCTAGCATACGCGTTGTAAAACCTTGAGAGGAAGTCCAAGAGGGAAAACCTAAAGAGGACACTATCTCTAGTAGTGGATTTGGGCTAGGGAAGACGCTGAAGAGGGTGGATTGTGAGATCCCACGTCGATTGGGAAGGAGAACGAAACATTATTTATAAGGGTGTGGAAACCTTTCCCCTAGCAGACGGGTTTTAAAACCTTGAGGGGAAGCCCATGAGGGAAAACCTAAAGAGGGCACTATCTCTAGTAGTGGATTTGGGCTAGGGAAGACGCTGAAGAGGGTGGATTGTGAGATCCCACGTCGATTGGGGAGGAGAACAAAATATTCTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACGCGTTTTAAAACTTTGAGAGGAAGCCCTGGAGGGAAAACCTAAAGAGGACACTATTTTTAGTAGTGAATTTGGGCTAGGGAAGACGCTGAAGAGGGTGGATTGTGAGATCCCACGTGGGGAGGAGAACGAACCATTATTTATAAGGGTGTGGAAACCTTTTCCTGGCAGACGCATTTTAAAATCTTGAGAGGAATCCCAGGAGGGAAAACCTAAAGAGGACACTATCTCTAGTAGTGGATTTGGGCTAGGGAAGACGCTGAAGAGGGTGGATTGTGAGATCCCATGTCGATTGGGGAGGAGAACGAAACATTGTTTATAAGGGTGTGAAAACCTTTCCTTTAGCATACGAGTTTTAAAACCTTGAGAGGAAGTCCAATAGGGAAAACCTAAAGAGGCACTATCTCTAGTAGTGGATTTGGGCTCGTAGATATAATGTTTATTATACATTTTACGAGTCAAAATAATAATCTGACGTTTTTTTATTTGTTCTTTTTGAAAAAATTGAGAAAAACTTGATCTTGTTGAAGAAATGAGAAACAGAAACACTTATCAATTGTCAATGTTCTTCAAAATCTGGTAATAGAAAACAGGAAACTAGAAAAATAAATGTGATTGAACAAGTCCTGAATTTTCAAACTGGGCTTGAACTTTGATCCTTGGAGATATCTCTTGAACATCTCAAGCTTTTGGTGATCTGATGAGGCATCTGTGAACTTGGCTTAACCTGAATAAAAACTTCTGATGCAGTGATATTAATAAGCTGTTCTCTGGCACACATCTTGATCCGCCTTCAAGGGAACATTTCAAACAACTCATAGCGGTACTCTGTTTATACAATTTATTACTCTGTTTATACAATTTATTACAAAGCTTTAACGATATGAAAAAGTGGCATCTGTTGATGATTGGGAAAACCTAAACTCGTTGGATATTAATGCCTAACCTTGTTTACTTTAGGTTTAATGCTCAGTAATTCTTGTTCTTTACTTGGTGCTAATGAACTTGGCTGAAGTATGGCTATCAACTTGCATGTGGTGCTGCTTGTTTTACTTTCCTATTCCTATTTTTGTCATGTTCGTCAATAATTTGTGGCTTTATTGAATTGTAGTAGCTTCCCTGCTCTTCCTGTTGCCATGTTCTTCAAAAAAAGTGGCCACTTTTGTTAACAATTTTGTTTTTATGCTTGTTTTCTTTCGGTTTCTTTACTGTGTTTTTCATCTTCCTTAGAGAAACTAGTCAAATTCCAAAACGAAAAGTGGGTTCTCTAAAACTACTTTTTTTCGGCCTGATTATTTGATTTGTTGGTGTTGAGTTTTTGAAAAGTAAGCTTATAGATCTGTAACCGCCCAAGCCCAAGCCTAAACCCACTGCCAATAGATATTGTCTGTTTTGGCCCCTTACGGTTTTTAAAACGCATTTGCTGGGGAGGAGTTTTCACACCCTTATAAAGAATGCTTCGTTCCCCTCTCCAACCAATGTGGAATCTCACGAGATCTTTACTTCTTTTGTGTCTTTTTTCTTTTTAATTTTCAAAATCCAAGTCAAGTTTTGAAAATGGAAAATAATAGTGTTTTTAAAACCATGTTTTTGTTTTTAGAATTAGACTAACAATTCAAATGTATCTTTTAAAAAGGGTTAAAATCATCGTAAATAGATAAGGAAACAAACATAAATTTTGTAAACCAAATAGTTATAGAATAGAACTTTAGTTTTAAGAACGTAAGTAAGTAGATAGCAAAAAAATAAGTAATTCAAAGCTGTATGAACTTTAAAAAATATATTTAAACACACTTCAAATTCTGGGATCAACTTAAGCATAAAATACCTGCTGATCATTAAGTGCCAACTTAAATTTCTGTGTTCATATACCTGCTGATCAAAAGCAAACATAAATTTCATGCTGATCAAACCAAATTTCTGTAGTACCTATAAGCATGCCAACTTCAGTTCATTAACTGCCCAACTTAGTGTTCATATAACCTGCTGATCAACTTAAGTAAGTAACCTGCTAATAACAAAAAATGCCAACTTCAAATTTCTGTGTTCATATACCTGCTGATCAACTTAAGCATGCCAACTTCAAATTTCTGTGTTCATATACCTGCTGATCAACTTAAGCATGCCAACTTCAAATTTCTGTGTTCATATACCTGCTGATCAACTTAAGCATGCCAACTTCAAATTTCTGTGTTCATATACCTGCTGATCAACTTAAGCATGCCAACTTCAAATTTCTGTGTTCATATACCTGCTGATCAACTTAAGCATGCCAACTTCAAATTTCTGTGTTCAATTGCTCTGTGCCAACTTCATTACCTGCTGATCAACTTAAGCATGCCAACTAAGCATATACCTGCTGATCAACTTAAGCATGCAAATTTCTGTGTTCATGTTCAACTTAAGCATGCCACTTCTTCTGTGCTGATCAACTTAAGCATGCTTGTGGCTCATTGTATTATATCAGGTACACGATACAAACAAGAACACAAAAATCGACAAAGGAGAATTTTTTGGTTTTATGGAGGAGTTGACATCTGAAACGTTCAAATCAGTGAGCCAGAAATTAGTCCTCACTTTGGTGATTGCACCAACGATCGCAGTGTTCACAAAGAAACGTACTGAAGGAGTTCCAGGCGTTGGAAAACTGGTGCAAAAACTCCCCTCTTCAGCATATGCTTCCATTATCACTCTTGCTGCTGTGCTGTTTCAGAGCTCTCAGCATCCGCTTCTTAAATGATAAGTTGAGACTCCTCTGTTTTCCTTCCTTTGTTCTTTTTTTTTTT

mRNA sequence

ATGGATAACTTGCATTCCGGGAAAGGAAGGTCGCTTTATTCCAAGTTTCCTTCCGAACAGGAAAAGGAAATGCGGGCATCTCGATCTTCCTTTACTCGAAGAACCGATTTCAATCACGGTTGGGGGCTGCTTTACGAGGTCTGTGATCTTCAATCGCCGTCGCTGCCGTCTAGTATGGGACAAATCTTGGGGAGATTTGGAGGAGAAGAATGGAGGAAGAAGAAGTTGAAGACGATATCAGACAGGATATTCGAGAAGATAAAAAAAAACAAATCAGCTGAGGAGGAGCTGTCATTTGAAGAATTATATATTGCCACGTTACTTGTGTTCAATGATATTAATAAGCTGTTCTCTGGCACACATCTTGATCCGCCTTCAAGGGAACATTTCAAACAACTCATAGCGGTACACGATACAAACAAGAACACAAAAATCGACAAAGGAGAATTTTTTGGTTTTATGGAGGAGTTGACATCTGAAACGTTCAAATCAGTGAGCCAGAAATTAGTCCTCACTTTGGTGATTGCACCAACGATCGCAGTGTTCACAAAGAAACGTACTGAAGGAGTTCCAGGCGTTGGAAAACTGGTGCAAAAACTCCCCTCTTCAGCATATGCTTCCATTATCACTCTTGCTGCTGTGCTGTTTCAGAGCTCTCAGCATCCGCTTCTTAAATGATAAGTTGAGACTCCTCTGTTTTCCTTCCTTTGTTCTTTTTTTTTTT

Coding sequence (CDS)

ATGGATAACTTGCATTCCGGGAAAGGAAGGTCGCTTTATTCCAAGTTTCCTTCCGAACAGGAAAAGGAAATGCGGGCATCTCGATCTTCCTTTACTCGAAGAACCGATTTCAATCACGGTTGGGGGCTGCTTTACGAGGTCTGTGATCTTCAATCGCCGTCGCTGCCGTCTAGTATGGGACAAATCTTGGGGAGATTTGGAGGAGAAGAATGGAGGAAGAAGAAGTTGAAGACGATATCAGACAGGATATTCGAGAAGATAAAAAAAAACAAATCAGCTGAGGAGGAGCTGTCATTTGAAGAATTATATATTGCCACGTTACTTGTGTTCAATGATATTAATAAGCTGTTCTCTGGCACACATCTTGATCCGCCTTCAAGGGAACATTTCAAACAACTCATAGCGGTACACGATACAAACAAGAACACAAAAATCGACAAAGGAGAATTTTTTGGTTTTATGGAGGAGTTGACATCTGAAACGTTCAAATCAGTGAGCCAGAAATTAGTCCTCACTTTGGTGATTGCACCAACGATCGCAGTGTTCACAAAGAAACGTACTGAAGGAGTTCCAGGCGTTGGAAAACTGGTGCAAAAACTCCCCTCTTCAGCATATGCTTCCATTATCACTCTTGCTGCTGTGCTGTTTCAGAGCTCTCAGCATCCGCTTCTTAAATGA

Protein sequence

MDNLHSGKGRSLYSKFPSEQEKEMRASRSSFTRRTDFNHGWGLLYEVCDLQSPSLPSSMGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK
Homology
[Close]
BLAST of Carg06360 vs. NCBI nr
Match: XP_022950463.1 (uncharacterized protein LOC111453554 [Cucurbita moschata])

HSP 1 Score: 322.8 bits (826), Expect = 9.4e-85
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS
Sbjct: 1   MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
           GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT
Sbjct: 61  GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 226
           IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK
Sbjct: 121 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 167

[Close]
BLAST of Carg06360 vs. NCBI nr
Match: XP_023540969.1 (uncharacterized protein LOC111801195 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.9 bits (707), Expect = 5.9e-71
Identity = 148/167 (88.62%), Postives = 154/167 (92.22%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           MGQILGRFGG+EWR KKLKTISDRIF+KIKK +S +EELSFEELYIATLLVFNDINKL S
Sbjct: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKK-QSDKEELSFEELYIATLLVFNDINKLLS 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
           G+H DPPSREHFKQLI  HD NKN KID  EFFGFM ELTSETF+SVSQKLVLTLVIAPT
Sbjct: 61  GSHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 226
           IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQ PLLK
Sbjct: 121 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQPLLK 166

[Close]
BLAST of Carg06360 vs. NCBI nr
Match: XP_022974167.1 (uncharacterized protein LOC111472754 [Cucurbita maxima] >XP_022974169.1 uncharacterized protein LOC111472754 [Cucurbita maxima])

HSP 1 Score: 270.8 bits (691), Expect = 4.2e-69
Identity = 143/167 (85.63%), Postives = 152/167 (91.02%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           MGQ+LGRFGG++WR KKLK IS+RIF+KIKK +S +EELSFEELYIATLLVFNDINKL S
Sbjct: 1   MGQVLGRFGGKDWRIKKLKMISNRIFDKIKK-QSDKEELSFEELYIATLLVFNDINKLLS 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
           G+H DPPSREHFKQLI  HD+NKN KID  EFFGFM ELTSETFKSVSQKLVLTLVIAPT
Sbjct: 61  GSHHDPPSREHFKQLITAHDSNKNEKIDNEEFFGFMMELTSETFKSVSQKLVLTLVIAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 226
           IAVFTKKRTEG PGVGKLVQKLPSSAYASIITLAAVLFQSS  PLLK
Sbjct: 121 IAVFTKKRTEGFPGVGKLVQKLPSSAYASIITLAAVLFQSSHQPLLK 166

[Close]
BLAST of Carg06360 vs. NCBI nr
Match: XP_022980436.1 (uncharacterized protein LOC111479803 [Cucurbita maxima])

HSP 1 Score: 193.7 bits (491), Expect = 6.6e-46
Identity = 100/167 (59.88%), Postives = 131/167 (78.44%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           M + LGRFGG+EWR ++L+ ISDRIF+ I   K   ++LSFE+LYIATLLV+NDINK   
Sbjct: 1   MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKK---DKLSFEDLYIATLLVYNDINKRLP 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
            +HLDPP+ E F+QL+  +D N++ KI + EF GF+  LTS+ F S+S +L+LTLVIAPT
Sbjct: 61  ISHLDPPTEERFRQLMKENDWNEDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 226
           +AV TK+ TEG+P VG LVQKLPSSAYA ++TLAA +FQ+SQ P+LK
Sbjct: 121 VAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK 164

[Close]
BLAST of Carg06360 vs. NCBI nr
Match: XP_023528258.1 (uncharacterized protein LOC111791228 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.7 bits (491), Expect = 6.6e-46
Identity = 100/167 (59.88%), Postives = 131/167 (78.44%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           M + LGRFGG+EWR ++L+ ISDRIF+ I   K   ++LSFE+LYIATLLV+NDINK   
Sbjct: 1   MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKK---DKLSFEDLYIATLLVYNDINKRLP 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
            +HLDPP+ E F++LI  +D N++ KI + EF GF+  LTS+ F S+S +L+LTLVIAPT
Sbjct: 61  ISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 226
           +AV TK+ TEG+P VG LVQKLPSSAYA ++TLAA +FQ+SQ P+LK
Sbjct: 121 VAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK 164

[Close]
BLAST of Carg06360 vs. TAIR10
Match: AT1G64850.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 165.2 bits (417), Expect = 4.5e-41
Identity = 80/160 (50.00%), Postives = 116/160 (72.50%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           MGQ+  +  G+EWR K+++ I DR+F++ K  ++    L+FEELYIA LLV+NDINK   
Sbjct: 1   MGQVFNKLRGKEWRHKQVQAICDRVFDRFKM-QTGRANLTFEELYIAVLLVYNDINKRLP 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
           G H DPPS++    ++   D N + ++D+ EF  F+E++T+ETF  VSQ L++ L++APT
Sbjct: 61  GPHFDPPSKDLVNSIMTDCDINLDGELDREEFVKFIEQITAETFNVVSQGLIIALIVAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQS 219
           +A+ TKK TEGVPGVGK+VQKLP+S YAS++TLA +   S
Sbjct: 121 VAIATKKATEGVPGVGKVVQKLPTSIYASLVTLAVMWVNS 159

[Close]
BLAST of Carg06360 vs. TAIR10
Match: AT4G37445.1 (BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1))

HSP 1 Score: 48.9 bits (115), Expect = 4.7e-06
Identity = 29/118 (24.58%), Postives = 59/118 (50.00%), Query Frame = 0 

Query: 98  SFEELYIATLLVFNDINKLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEEL 157
           +F++ ++A L +FN+ N    G H D P+ +  K   A     K+ +  K  F  FM + 
Sbjct: 36  NFDDFHVAVLDIFNNFNSALPGRHFDFPTPDQIKVCFARWKEAKDEEEKKKLFIEFMSKS 95

Query: 158 TSETFKSVSQKLVLTLVIAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVL 216
              +   +    ++T +++P  A+  K+  E VP + KL++ +P   +   +T+ A++
Sbjct: 96  VKPS--KLDDVTMITGIVSPPAAMAAKRAGENVPQL-KLIKLIPDVIFVPTVTILAIV 150

[Close]
BLAST of Carg06360 vs. TrEMBL
Match: tr|A0A0A0L6I0|A0A0A0L6I0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126970 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.7e-46
Identity = 97/167 (58.08%), Postives = 131/167 (78.44%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           MGQ   R GG+EWR  +L+ IS++IF++  K     E LSFE+LYIATLLVFNDINK   
Sbjct: 1   MGQAFRRLGGKEWRNTQLENISNKIFDRFGK-----ERLSFEDLYIATLLVFNDINKYLP 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
           G H+DPP ++  K+++ + D N+N  ID+ EF  F+++LTSE+F SVSQ+L++TLV+APT
Sbjct: 61  GQHVDPPKKDRVKEVMEMCDKNQNYAIDREEFLEFVKQLTSESFISVSQRLIITLVVAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 226
           +AV TKK TEGVPG+GK+VQK+PSSAYA ++TLAA+LFQ+S+  LLK
Sbjct: 121 LAVVTKKSTEGVPGLGKMVQKVPSSAYALLVTLAALLFQNSRQQLLK 162

[Close]
BLAST of Carg06360 vs. TrEMBL
Match: tr|A0A1S2YUL2|A0A1S2YUL2_CICAR (uncharacterized protein LOC101493046 OS=Cicer arietinum OX=3827 GN=LOC101493046 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.8e-45
Identity = 93/159 (58.49%), Postives = 126/159 (79.25%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           MGQI  +F GEEWRKK+++ I+DR+FEK+ KN+   E LSFE+LYIA LLV+NDINKL  
Sbjct: 1   MGQIFDKFQGEEWRKKQIRQITDRVFEKV-KNQIQTENLSFEDLYIAVLLVYNDINKLIP 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
           G H DPPS++  +Q++   D N +  ID+ EFF F++ +T++TF  VSQKL++TLV+APT
Sbjct: 61  GPHFDPPSKDRVRQIMKECDLNLDGVIDREEFFSFIQVMTADTFTVVSQKLIITLVVAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQ 218
           +A+ TK+ TEGVPGVGK+VQKLP++ YAS++TLA V FQ
Sbjct: 121 VAMATKRATEGVPGVGKVVQKLPNAVYASLVTLAVVWFQ 158

[Close]
BLAST of Carg06360 vs. TrEMBL
Match: tr|A0A1S3AVI1|A0A1S3AVI1_CUCME (uncharacterized protein LOC103483388 OS=Cucumis melo OX=3656 GN=LOC103483388 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.8e-44
Identity = 94/167 (56.29%), Postives = 129/167 (77.25%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           MGQ L RF G++W+ K+L+ IS++IF++  K     E+LSFE+LYIATLLVFNDINK   
Sbjct: 1   MGQALRRFRGQDWKNKQLEMISNKIFDRFHK-----EKLSFEDLYIATLLVFNDINKYLP 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
           G H+DPP++E   +L+   D N+N  ID+ EF  F++ LT E+  SVSQ+L++TLV+APT
Sbjct: 61  GPHIDPPTKERVAELVEKSDKNENQAIDRDEFLKFIKLLTFESIASVSQRLIITLVVAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 226
           +AV TK+ TEG+PG+GK+VQK+PSSAYA ++TLAA+LFQ+S   LLK
Sbjct: 121 LAVVTKRSTEGIPGLGKMVQKVPSSAYALLVTLAALLFQNSNQQLLK 162

[Close]
BLAST of Carg06360 vs. TrEMBL
Match: tr|A0A151UG52|A0A151UG52_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_045813 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.1e-44
Identity = 88/163 (53.99%), Postives = 128/163 (78.53%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           MGQ+  +  G+EWRK++++ I+DR+FEK+ +N+   ++LSFE+LYI+ LLV+NDINK   
Sbjct: 1   MGQVFDKLEGKEWRKRQIRKITDRVFEKV-QNQKQTDKLSFEDLYISVLLVYNDINKYIP 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
           G H DPPS++  K++I   D N + +ID+ EFF F+ ++T++TF  VSQKL++TLV+APT
Sbjct: 61  GPHFDPPSKQKVKEVIESCDINFDGEIDRDEFFDFILQMTADTFTVVSQKLIVTLVVAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQH 222
           +AV TKK TEGVPGVG+LVQ++P+S YAS++T+AAV FQ   H
Sbjct: 121 VAVATKKATEGVPGVGRLVQRIPNSIYASLVTIAAVWFQKKAH 162

[Close]
BLAST of Carg06360 vs. TrEMBL
Match: tr|A0A061EZ21|A0A061EZ21_THECC (Calcium-binding EF hand family protein OS=Theobroma cacao OX=3641 GN=TCM_025708 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 91/162 (56.17%), Postives = 129/162 (79.63%), Query Frame = 0 

Query: 59  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 118
           MGQ+L +F G+EWRKK+++ ISD++FE+I KN+S    L+FE+LYI+ LLV+NDINK   
Sbjct: 1   MGQVLDKFHGKEWRKKQIRKISDKVFERI-KNQSGRATLTFEDLYISILLVYNDINKRLP 60

Query: 119 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 178
           G H DPPS+E  + ++  +D N + +ID+ EF  F+++LT++TF  VSQ L++TLV+APT
Sbjct: 61  GPHFDPPSKEQVRSMMQEYDFNLDGEIDQEEFVKFIQQLTTDTFIVVSQGLIVTLVVAPT 120

Query: 179 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQ 221
           +A+ TKK TEGVPGVGK+VQKLP+S YAS++TLA V FQ+S+
Sbjct: 121 VAMATKKATEGVPGVGKVVQKLPNSIYASLVTLAIVWFQTSR 161

The following BLAST results are available for this feature:
BLAST of Carg06360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950463.19.4e-85100.00uncharacterized protein LOC111453554 [Cucurbita moschata][more]
XP_023540969.15.9e-7188.62uncharacterized protein LOC111801195 [Cucurbita pepo subsp. pepo][more]
XP_022974167.14.2e-6985.63uncharacterized protein LOC111472754 [Cucurbita maxima] >XP_022974169.1 uncharac... [more]
XP_022980436.16.6e-4659.88uncharacterized protein LOC111479803 [Cucurbita maxima][more]
XP_023528258.16.6e-4659.88uncharacterized protein LOC111791228 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg06360 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G64850.14.5e-4150.00Calcium-binding EF hand family protein[more]
AT4G37445.14.7e-0624.58BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family prote... [more]
BLAST of Carg06360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg06360 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6I0|A0A0A0L6I0_CUCSA9.7e-4658.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126970 PE=4 SV=1[more]
tr|A0A1S2YUL2|A0A1S2YUL2_CICAR2.8e-4558.49uncharacterized protein LOC101493046 OS=Cicer arietinum OX=3827 GN=LOC101493046 ... [more]
tr|A0A1S3AVI1|A0A1S3AVI1_CUCME1.8e-4456.29uncharacterized protein LOC103483388 OS=Cucumis melo OX=3656 GN=LOC103483388 PE=... [more]
tr|A0A151UG52|A0A151UG52_CAJCA9.1e-4453.99Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_045813 PE=4 SV=1[more]
tr|A0A061EZ21|A0A061EZ21_THECC1.2e-4356.17Calcium-binding EF hand family protein OS=Theobroma cacao OX=3641 GN=TCM_025708 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06360-RACarg06360-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 10..185
e-value: 2.6E-6
score: 29.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR11639:SF62SUBFAMILY NOT NAMEDcoord: 69..221
NoneNo IPR availablePANTHERPTHR11639S100 CALCIUM-BINDING PROTEINcoord: 69..221
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 125..160
score: 10.915
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 82..164

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06360Csa3G126960Cucumber (Chinese Long) v2carcuB0975
Carg06360MELO3C006222Melon (DHL92) v3.5.1carmeB0941
Carg06360ClCG05G002560Watermelon (Charleston Gray)carwcgB0935
Carg06360CSPI03G09860Wild cucumber (PI 183967)carcpiB0998
Carg06360Cucsa.257320Cucumber (Gy14) v1carcgyB1077
Carg06360CmaCh06G011560Cucurbita maxima (Rimu)carcmaB1325
Carg06360CmaCh14G019600Cucurbita maxima (Rimu)carcmaB1320
Carg06360CmoCh14G020210Cucurbita moschata (Rifu)carcmoB1284
Carg06360CmoCh06G011870Cucurbita moschata (Rifu)carcmoB1288
Carg06360Lsi05G019270Bottle gourd (USVL1VR-Ls)carlsiB878
Carg06360Cp4.1LG08g01980Cucurbita pepo (Zucchini)carcpeB1333
Carg06360Cp4.1LG03g17290Cucurbita pepo (Zucchini)carcpeB1331
Carg06360CsGy3G009950Cucumber (Gy14) v2carcgybB0948
Carg06360MELO3C006222.2Melon (DHL92) v3.6.1carmedB0947
Carg06360CsaV3_3G010000Cucumber (Chinese Long) v3carcucB1003
Carg06360Cla97C05G083080Watermelon (97103) v2carwmbB1008
Carg06360Bhi01G000062Wax gourdcarwgoB1118
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg06360Carg14858Silver-seed gourdcarcarB549
The following block(s) are covering this gene:
GeneOrganismBlock
Carg06360Silver-seed gourdcarcarB266
Carg06360Cucumber (Gy14) v2carcgybB0949
Carg06360Cucumber (Gy14) v1carcgyB1079
Carg06360Cucurbita maxima (Rimu)carcmaB1319
Carg06360Cucurbita maxima (Rimu)carcmaB1321
Carg06360Cucurbita moschata (Rifu)carcmoB1285
Carg06360Cucurbita pepo (Zucchini)carcpeB1328
Carg06360Wild cucumber (PI 183967)carcpiB0999
Carg06360Cucumber (Chinese Long) v2carcuB0976
Carg06360Cucumber (Chinese Long) v3carcucB1004
Carg06360Bottle gourd (USVL1VR-Ls)carlsiB875
Carg06360Melon (DHL92) v3.5.1carmeB0938
Carg06360Melon (DHL92) v3.6.1carmedB0944
Carg06360Watermelon (Charleston Gray)carwcgB0937
Carg06360Watermelon (97103) v1carwmB0961
Carg06360Watermelon (97103) v1carwmB0963
Carg06360Watermelon (97103) v2carwmbB1010
Carg06360Wax gourdcarwgoB1113